Cmc11g0289941 (gene) Melon (Charmono) v1.1

Overview
NameCmc11g0289941
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionReverse transcriptase
LocationCMiso1.1chr11: 4704426 .. 4705551 (-)
RNA-Seq ExpressionCmc11g0289941
SyntenyCmc11g0289941
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGCCTTTGTATTGACTATAGAGAGCTGAACAAGGTGACAGTTAAGAATCGCTATCTCTTGCCCAGGATTGATGATTTATTCGATCAGTTGCAAGGAGCCACCATCTTTTCTAAGATCGACATGCGATCAGGCTACCACCAATTGAGGATCAAGGATAGTGATATTCCTAAGACCGCTTTCCGTTCAAGATACAGACATTATGAGTTCATTGTGATGTCTTTTGGGTTGACTAATGCTCCTGCGGTATTCATGGACTTGATGAACAGGGTGTTTAAGGATTTCTTAGACACGTTTGTCATAGTTTTCATTGATGACATTTTGATTTACTCCAAGACTGAGGCTGAGCATGAGGAGCATTTGCACCAGGTTTTGGAGACTCTTCGAGCTAATAAACTGTACGCCAAGTTCTCCAAGTGTGAGTTCTGGCTGAAGAAGGTGACTTTTCTCGGTCACGTGGTTTCCAGTGAGTGAGTTTCTGTGGACCCAGCAAAGGTTGAAGCGATTACCAGTTAGCGAGATTAATAGTTTCCTAGGTTTGACAGGTTACTACAGGAGGTTCGTGGAAGACTTCTCTCGTATAGCCAGTCCCTTGACCCAGTTGACCAGGAAGGGGACTCCTTTTATTTGGAACCCAGCTTGCGAGGGTAGCTTCCAGGAGCTCAAACAGAAGCTTGTGTCTACACCAGTTCTGACAGTACCCGATGGATCTAGAAGTTTCGTGATCTACAGTGATGCCTCAAAGAAAGGACTGGGCTGTGTTCTAATGCAGCAAGGTAAGGTAGTTGCTTATGCCTCCCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACCCATGACCTAGAGTTGGCAGCAGTGGTTTTTGCATTGAAGATATGGAGGCACTACCTGTACGGTGAGAAGATACAAATTTTCCCTGACCATAAGAGCCTGAAGTACTTCTTCACCCAAAAGGAGTTGAACATTAGACAGAGGAGGTGGCTTGAGTTAGTGAAAGACTATGACTGCGAGATTTTGTATCACCCAGGTAAGGCAAACGTAGTAGCTGACGCGTTGAGTAGGAAGGCATTCAGCAGCGCTTATCACCAAGCAAGCTCCCTTAATAAGAGATCTCGAGAGAGCTGA

mRNA sequence

ATGCGCCTTTGTATTGACTATAGAGAGCTGAACAAGGTGACAGTTAAGAATCGCTATCTCTTGCCCAGGATTGATGATTTATTCGATCAGTTGCAAGGAGCCACCATCTTTTCTAAGATCGACATGCGATCAGGCTACCACCAATTGAGGATCAAGGATAGTGATATTCCTAAGACCGCTTTCCGTTCAAGATACAGACATTATGAGTTCATTGTGATGTCTTTTGGGTTGACTAATGCTCCTGCGGTATTCATGGACTTGATGAACAGGGTGTTTAAGGATTTCTTAGACACGTTTGTCATAGTTTTCATTGATGACATTTTGATTTACTCCAAGACTGAGGCTGAGCATGAGGAGCATTTGCACCAGGTTTTGGAGACTCTTCGAGCTAATAAACTGTACGCCAAGTTCTCCAAGTTGAGTGAGTTTCTGTGGACCCAGCAAAGGTTGAAGCGATTACCAGTTAGCGAGATTAATAGTTTCCTAGGTTTGACAGGTTACTACAGGAGGTTCGTGGAAGACTTCTCTCGTATAGCCAGTCCCTTGACCCAGTTGACCAGGAAGGGGACTCCTTTTATTTGGAACCCAGCTTGCGAGGGTAGCTTCCAGGAGCTCAAACAGAAGCTTGTGTCTACACCAGTTCTGACAGTACCCGATGGATCTAGAAGTTTCGTGATCTACAGTGATGCCTCAAAGAAAGGACTGGGCTGTGTTCTAATGCAGCAAGGTAAGGTAGTTGCTTATGCCTCCCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACCCATGACCTAGAGTTGGCAGCAGTGGTTTTTGCATTGAAGATATGGAGGCACTACCTGTACGGTGAGAAGATACAAATTTTCCCTGACCATAAGAGCCTGAAGTACTTCTTCACCCAAAAGGAGTTGAACATTAGACAGAGGAGGTGGCTTGAGTTAGTGAAAGACTATGACTGCGAGATTTTGTATCACCCAGGTAAGGCAAACGTAGTAGCTGACGCGTTGAGTAGGAAGGCATTCAGCAGCGCTTATCACCAAGCAAGCTCCCTTAATAAGAGATCTCGAGAGAGCTGA

Coding sequence (CDS)

ATGCGCCTTTGTATTGACTATAGAGAGCTGAACAAGGTGACAGTTAAGAATCGCTATCTCTTGCCCAGGATTGATGATTTATTCGATCAGTTGCAAGGAGCCACCATCTTTTCTAAGATCGACATGCGATCAGGCTACCACCAATTGAGGATCAAGGATAGTGATATTCCTAAGACCGCTTTCCGTTCAAGATACAGACATTATGAGTTCATTGTGATGTCTTTTGGGTTGACTAATGCTCCTGCGGTATTCATGGACTTGATGAACAGGGTGTTTAAGGATTTCTTAGACACGTTTGTCATAGTTTTCATTGATGACATTTTGATTTACTCCAAGACTGAGGCTGAGCATGAGGAGCATTTGCACCAGGTTTTGGAGACTCTTCGAGCTAATAAACTGTACGCCAAGTTCTCCAAGTTGAGTGAGTTTCTGTGGACCCAGCAAAGGTTGAAGCGATTACCAGTTAGCGAGATTAATAGTTTCCTAGGTTTGACAGGTTACTACAGGAGGTTCGTGGAAGACTTCTCTCGTATAGCCAGTCCCTTGACCCAGTTGACCAGGAAGGGGACTCCTTTTATTTGGAACCCAGCTTGCGAGGGTAGCTTCCAGGAGCTCAAACAGAAGCTTGTGTCTACACCAGTTCTGACAGTACCCGATGGATCTAGAAGTTTCGTGATCTACAGTGATGCCTCAAAGAAAGGACTGGGCTGTGTTCTAATGCAGCAAGGTAAGGTAGTTGCTTATGCCTCCCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACCCATGACCTAGAGTTGGCAGCAGTGGTTTTTGCATTGAAGATATGGAGGCACTACCTGTACGGTGAGAAGATACAAATTTTCCCTGACCATAAGAGCCTGAAGTACTTCTTCACCCAAAAGGAGTTGAACATTAGACAGAGGAGGTGGCTTGAGTTAGTGAAAGACTATGACTGCGAGATTTTGTATCACCCAGGTAAGGCAAACGTAGTAGCTGACGCGTTGAGTAGGAAGGCATTCAGCAGCGCTTATCACCAAGCAAGCTCCCTTAATAAGAGATCTCGAGAGAGCTGA

Protein sequence

MRLCIDYRELNKVTVKNRYLLPRIDDLFDQLQGATIFSKIDMRSGYHQLRIKDSDIPKTAFRSRYRHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDTFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKLSEFLWTQQRLKRLPVSEINSFLGLTGYYRRFVEDFSRIASPLTQLTRKGTPFIWNPACEGSFQELKQKLVSTPVLTVPDGSRSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFPDHKSLKYFFTQKELNIRQRRWLELVKDYDCEILYHPGKANVVADALSRKAFSSAYHQASSLNKRSRES
Homology
BLAST of Cmc11g0289941 vs. NCBI nr
Match: TYK20443.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 608.2 bits (1567), Expect = 4.5e-170
Identity = 308/371 (83.02%), Postives = 321/371 (86.52%), Query Frame = 0

Query: 1    MRLCIDYRELNKVTVKNRYLLPRIDDLFDQLQGATIFSKIDMRSGYHQLRIKDSDIPKTA 60
            MRLCIDYRELNKVTVKNRY LPRIDDLFDQLQGAT+FSKID+RSGYHQLRI+D DIPKTA
Sbjct: 977  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTA 1036

Query: 61   FRSRYRHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDTFVIVFIDDILIYSKTEAEHEEH 120
            FRSRY HYEF+VMSFGLTNAPAVFMDLMNRVFKDFLD+FVIVFIDDILIYSKTEAEHEEH
Sbjct: 1037 FRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEH 1096

Query: 121  LHQVLETLRANKLYAKFSKLSEFL---------------------------WTQQRLKRL 180
            LHQVLETLRANKLYAKFSK   +L                           WT+      
Sbjct: 1097 LHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPS---- 1156

Query: 181  PVSEINSFLGLTGYYRRFVEDFSRIASPLTQLTRKGTPFIWNPACEGSFQELKQKLVSTP 240
             VSEI SFLGL GYYRRFVEDFSRIASPLTQLTRKGTPF+W+PACE SFQELKQKLV+ P
Sbjct: 1157 TVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAP 1216

Query: 241  VLTVPDGSRSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFA 300
            VLTVPDGS +FVIYSDASKKGLGCVLMQQGKVVAYASRQLK HEQNYPTHDLELAAVVFA
Sbjct: 1217 VLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFA 1276

Query: 301  LKIWRHYLYGEKIQIFPDHKSLKYFFTQKELNIRQRRWLELVKDYDCEILYHPGKANVVA 345
            LKIWRHYLYGEKIQI+ DHKSLKYFFTQKELN+RQRRWLELVKDYDCEILYHPGKANVVA
Sbjct: 1277 LKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVA 1336

BLAST of Cmc11g0289941 vs. NCBI nr
Match: KAA0025998.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 608.2 bits (1567), Expect = 4.5e-170
Identity = 308/371 (83.02%), Postives = 321/371 (86.52%), Query Frame = 0

Query: 1    MRLCIDYRELNKVTVKNRYLLPRIDDLFDQLQGATIFSKIDMRSGYHQLRIKDSDIPKTA 60
            MRLCIDYRELNKVTVKNRY LPRIDDLFDQLQGAT+FSKID+RSGYHQLRI+D DIPKTA
Sbjct: 641  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTA 700

Query: 61   FRSRYRHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDTFVIVFIDDILIYSKTEAEHEEH 120
            FRSRY HYEF+VMSFGLTNAPAVFMDLMNRVFKDFLD+FVIVFIDDILIYSKTEAEHEEH
Sbjct: 701  FRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEH 760

Query: 121  LHQVLETLRANKLYAKFSKLSEFL---------------------------WTQQRLKRL 180
            LHQVLETLRANKLYAKFSK   +L                           WT+      
Sbjct: 761  LHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPS---- 820

Query: 181  PVSEINSFLGLTGYYRRFVEDFSRIASPLTQLTRKGTPFIWNPACEGSFQELKQKLVSTP 240
             VSEI SFLGL GYYRRFVEDFSRIASPLTQLTRKGTPF+W+PACE SFQELKQKLV+ P
Sbjct: 821  TVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAP 880

Query: 241  VLTVPDGSRSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFA 300
            VLTVPDGS +FVIYSDASKKGLGCVLMQQGKVVAYASRQLK HEQNYPTHDLELAAVVFA
Sbjct: 881  VLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFA 940

Query: 301  LKIWRHYLYGEKIQIFPDHKSLKYFFTQKELNIRQRRWLELVKDYDCEILYHPGKANVVA 345
            LKIWRHYLYGEKIQI+ DHKSLKYFFTQKELN+RQRRWLELVKDYDCEILYHPGKANVVA
Sbjct: 941  LKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVA 1000

BLAST of Cmc11g0289941 vs. NCBI nr
Match: TYK01576.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 608.2 bits (1567), Expect = 4.5e-170
Identity = 308/371 (83.02%), Postives = 321/371 (86.52%), Query Frame = 0

Query: 1    MRLCIDYRELNKVTVKNRYLLPRIDDLFDQLQGATIFSKIDMRSGYHQLRIKDSDIPKTA 60
            MRLCIDYRELNKVTVKNRY LPRIDDLFDQLQGAT+FSKID+RSGYHQLRI+D DIPKTA
Sbjct: 978  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTA 1037

Query: 61   FRSRYRHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDTFVIVFIDDILIYSKTEAEHEEH 120
            FRSRY HYEF+VMSFGLTNAPAVFMDLMNRVFKDFLD+FVIVFIDDILIYSKTEAEHEEH
Sbjct: 1038 FRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEH 1097

Query: 121  LHQVLETLRANKLYAKFSKLSEFL---------------------------WTQQRLKRL 180
            LHQVLETLRANKLYAKFSK   +L                           WT+      
Sbjct: 1098 LHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPS---- 1157

Query: 181  PVSEINSFLGLTGYYRRFVEDFSRIASPLTQLTRKGTPFIWNPACEGSFQELKQKLVSTP 240
             VSEI SFLGL GYYRRFVEDFSRIASPLTQLTRKGTPF+W+PACE SFQELKQKLV+ P
Sbjct: 1158 TVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAP 1217

Query: 241  VLTVPDGSRSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFA 300
            VLTVPDGS +FVIYSDASKKGLGCVLMQQGKVVAYASRQLK HEQNYPTHDLELAAVVFA
Sbjct: 1218 VLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFA 1277

Query: 301  LKIWRHYLYGEKIQIFPDHKSLKYFFTQKELNIRQRRWLELVKDYDCEILYHPGKANVVA 345
            LKIWRHYLYGEKIQI+ DHKSLKYFFTQKELN+RQRRWLELVKDYDCEILYHPGKANVVA
Sbjct: 1278 LKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVA 1337

BLAST of Cmc11g0289941 vs. NCBI nr
Match: TYK06888.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 608.2 bits (1567), Expect = 4.5e-170
Identity = 308/371 (83.02%), Postives = 321/371 (86.52%), Query Frame = 0

Query: 1   MRLCIDYRELNKVTVKNRYLLPRIDDLFDQLQGATIFSKIDMRSGYHQLRIKDSDIPKTA 60
           MRLCIDYRELNKVTVKNRY LPRIDDLFDQLQGAT+FSKID+RSGYHQLRI+D DIPKTA
Sbjct: 596 MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTA 655

Query: 61  FRSRYRHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDTFVIVFIDDILIYSKTEAEHEEH 120
           FRSRY HYEF+VMSFGLTNAPAVFMDLMNRVFKDFLD+FVIVFIDDILIYSKTEAEHEEH
Sbjct: 656 FRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEH 715

Query: 121 LHQVLETLRANKLYAKFSKLSEFL---------------------------WTQQRLKRL 180
           LHQVLETLRANKLYAKFSK   +L                           WT+      
Sbjct: 716 LHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPS---- 775

Query: 181 PVSEINSFLGLTGYYRRFVEDFSRIASPLTQLTRKGTPFIWNPACEGSFQELKQKLVSTP 240
            VSEI SFLGL GYYRRFVEDFSRIASPLTQLTRKGTPF+W+PACE SFQELKQKLV+ P
Sbjct: 776 TVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAP 835

Query: 241 VLTVPDGSRSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFA 300
           VLTVPDGS +FVIYSDASKKGLGCVLMQQGKVVAYASRQLK HEQNYPTHDLELAAVVFA
Sbjct: 836 VLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFA 895

Query: 301 LKIWRHYLYGEKIQIFPDHKSLKYFFTQKELNIRQRRWLELVKDYDCEILYHPGKANVVA 345
           LKIWRHYLYGEKIQI+ DHKSLKYFFTQKELN+RQRRWLELVKDYDCEILYHPGKANVVA
Sbjct: 896 LKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVA 955

BLAST of Cmc11g0289941 vs. NCBI nr
Match: KAA0062342.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 608.2 bits (1567), Expect = 4.5e-170
Identity = 308/371 (83.02%), Postives = 321/371 (86.52%), Query Frame = 0

Query: 1    MRLCIDYRELNKVTVKNRYLLPRIDDLFDQLQGATIFSKIDMRSGYHQLRIKDSDIPKTA 60
            MRLCIDYRELNKVTVKNRY LPRIDDLFDQLQGAT+FSKID+RSGYHQLRI+D DIPKTA
Sbjct: 1024 MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTA 1083

Query: 61   FRSRYRHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDTFVIVFIDDILIYSKTEAEHEEH 120
            FRSRY HYEF+VMSFGLTNAPAVFMDLMNRVFKDFLD+FVIVFIDDILIYSKTEAEHEEH
Sbjct: 1084 FRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEH 1143

Query: 121  LHQVLETLRANKLYAKFSKLSEFL---------------------------WTQQRLKRL 180
            LHQVLETLRANKLYAKFSK   +L                           WT+      
Sbjct: 1144 LHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPS---- 1203

Query: 181  PVSEINSFLGLTGYYRRFVEDFSRIASPLTQLTRKGTPFIWNPACEGSFQELKQKLVSTP 240
             VSEI SFLGL GYYRRFVEDFSRIASPLTQLTRKGTPF+W+PACE SFQELKQKLV+ P
Sbjct: 1204 TVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAP 1263

Query: 241  VLTVPDGSRSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFA 300
            VLTVPDGS +FVIYSDASKKGLGCVLMQQGKVVAYASRQLK HEQNYPTHDLELAAVVFA
Sbjct: 1264 VLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFA 1323

Query: 301  LKIWRHYLYGEKIQIFPDHKSLKYFFTQKELNIRQRRWLELVKDYDCEILYHPGKANVVA 345
            LKIWRHYLYGEKIQI+ DHKSLKYFFTQKELN+RQRRWLELVKDYDCEILYHPGKANVVA
Sbjct: 1324 LKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVA 1383

BLAST of Cmc11g0289941 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 3.7e-66
Identity = 135/369 (36.59%), Postives = 209/369 (56.64%), Query Frame = 0

Query: 2   RLCIDYRELNKVTVKNRYLLPRIDDLFDQLQGATIFSKIDMRSGYHQLRIKDSDIPKTAF 61
           R+ IDYR+LN++TV +R+ +P +D++  +L     F+ ID+  G+HQ+ +    + KTAF
Sbjct: 263 RIVIDYRKLNEITVGDRHPIPNMDEILGKLGRCNYFTTIDLAKGFHQIEMDPESVSKTAF 322

Query: 62  RSRYRHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDTFVIVFIDDILIYSKTEAEHEEHL 121
            +++ HYE++ M FGL NAPA F   MN + +  L+   +V++DDI+++S +  EH + L
Sbjct: 323 STKHGHYEYLRMPFGLKNAPATFQRCMNDILRPLLNKHCLVYLDDIIVFSTSLDEHLQSL 382

Query: 122 HQVLETLRANKLYAKFSKLSEFLWTQ--------------------QRLKRLPV----SE 181
             V E L    L  +  K  EFL  +                    + +++ P+     E
Sbjct: 383 GLVFEKLAKANLKLQLDK-CEFLKQETTFLGHVLTPDGIKPNPEKIEAIQKYPIPTKPKE 442

Query: 182 INSFLGLTGYYRRFVEDFSRIASPLTQLTRKGTPF-IWNPACEGSFQELKQKLVSTPVLT 241
           I +FLGLTGYYR+F+ +F+ IA P+T+  +K       NP  + +F++LK  +   P+L 
Sbjct: 443 IKAFLGLTGYYRKFIPNFADIAKPMTKCLKKNMKIDTTNPEYDSAFKKLKYLISEDPILK 502

Query: 242 VPDGSRSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKI 301
           VPD ++ F + +DAS   LG VL Q G  ++Y SR L  HE NY T + EL A+V+A K 
Sbjct: 503 VPDFTKKFTLTTDASDVALGAVLSQDGHPLSYISRTLNEHEINYSTIEKELLAIVWATKT 562

Query: 302 WRHYLYGEKIQIFPDHKSLKYFFTQKELNIRQRRWLELVKDYDCEILYHPGKANVVADAL 346
           +RHYL G   +I  DH+ L + +  K+ N +  RW   + ++D +I Y  GK N VADAL
Sbjct: 563 FRHYLLGRHFEISSDHQPLSWLYRMKDPNSKLTRWRVKLSEFDFDIKYIKGKENCVADAL 622

BLAST of Cmc11g0289941 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 1.6e-61
Identity = 135/383 (35.25%), Postives = 208/383 (54.31%), Query Frame = 0

Query: 2   RLCIDYRELNKVTVKNRYLLPRIDDLFDQLQGATIFSKIDMRSGYHQLRIKDSDIPKTAF 61
           R+ IDYR+LN++T+ +RY +P +D++  +L     F+ ID+  G+HQ+ + +  I KTAF
Sbjct: 262 RVVIDYRKLNEITIPDRYPIPNMDEILGKLGKCQYFTTIDLAKGFHQIEMDEESISKTAF 321

Query: 62  RSRYRHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDTFVIVFIDDILIYSKTEAEHEEHL 121
            ++  HYE++ M FGL NAPA F   MN + +  L+   +V++DDI+I+S +  EH   +
Sbjct: 322 STKSGHYEYLRMPFGLRNAPATFQRCMNNILRPLLNKHCLVYLDDIIIFSTSLTEHLNSI 381

Query: 122 HQVLETLRANKLYAKFSKLSEFL----------WTQQRLKRLPV--------------SE 181
             V   L    L  +  K  EFL           T   +K  P+               E
Sbjct: 382 QLVFTKLADANLKLQLDK-CEFLKKEANFLGHIVTPDGIKPNPIKVKAIVSYPIPTKDKE 441

Query: 182 INSFLGLTGYYRRFVEDFSRIASPLTQLTRKGTPFIWNPACE--GSFQELKQKLVSTPVL 241
           I +FLGLTGYYR+F+ +++ IA P+T   +K T  I     E   +F++LK  ++  P+L
Sbjct: 442 IRAFLGLTGYYRKFIPNYADIAKPMTSCLKKRTK-IDTQKLEYIEAFEKLKALIIRDPIL 501

Query: 242 TVPDGSRSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALK 301
            +PD  + FV+ +DAS   LG VL Q G  +++ SR L  HE NY   + EL A+V+A K
Sbjct: 502 QLPDFEKKFVLTTDASNLALGAVLSQNGHPISFISRTLNDHELNYSAIEKELLAIVWATK 561

Query: 302 IWRHYLYGEKIQIFPDHKSLKYFFTQKELNIRQRRWLELVKDYDCEILYHPGKANVVADA 359
            +RHYL G +  I  DH+ L++    KE   +  RW   + +Y  +I Y  GK N VADA
Sbjct: 562 TFRHYLLGRQFLIASDHQPLRWLHNLKEPGAKLERWRVRLSEYQFKIDYIKGKENSVADA 621

BLAST of Cmc11g0289941 vs. ExPASy Swiss-Prot
Match: Q8I7P9 (Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 1.6e-61
Identity = 131/377 (34.75%), Postives = 211/377 (55.97%), Query Frame = 0

Query: 2   RLCIDYRELNKVTVKNRYLLPRIDDLFDQLQGATIFSKIDMRSGYHQLRIKDSDIPKTAF 61
           R+ +D++ LN VT+ + Y +P I+     L  A  F+ +D+ SG+HQ+ +K+SDIPKTAF
Sbjct: 179 RMVVDFKRLNTVTIPDTYPIPDINATLASLGNAKYFTTLDLTSGFHQIHMKESDIPKTAF 238

Query: 62  RSRYRHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDTFVIVFIDDILIYSKTEAEHEEHL 121
            +    YEF+ + FGL NAPA+F  +++ + ++ +     V+IDDI+++S+    H ++L
Sbjct: 239 STLNGKYEFLRLPFGLKNAPAIFQRMIDDILREHIGKVCYVYIDDIIVFSEDYDTHWKNL 298

Query: 122 HQVLETLRANKLYAKFSKLSEFLWTQ--------------------QRLKRLP----VSE 181
             VL +L    L     K S FL TQ                    + +  +P    V E
Sbjct: 299 RLVLASLSKANLQVNLEK-SHFLDTQVEFLGYIVTADGIKADPKKVRAISEMPPPTSVKE 358

Query: 182 INSFLGLTGYYRRFVEDFSRIASPLTQLTR-----------KGTPFIWNPACEGSFQELK 241
           +  FLG+T YYR+F++D++++A PLT LTR              P   +     SF +LK
Sbjct: 359 LKRFLGMTSYYRKFIQDYAKVAKPLTNLTRGLYANIKSSQSSKVPITLDETALQSFNDLK 418

Query: 242 QKLVSTPVLTVPDGSRSFVIYSDASKKGLGCVLMQ----QGKVVAYASRQLKSHEQNYPT 301
             L S+ +L  P  ++ F + +DAS   +G VL Q    + + +AY SR L   E+NY T
Sbjct: 419 SILCSSEILAFPCFTKPFHLTTDASNWAIGAVLSQDDQGRDRPIAYISRSLNKTEENYAT 478

Query: 302 HDLELAAVVFALKIWRHYLYGE-KIQIFPDHKSLKYFFTQKELNIRQRRWLELVKDYDCE 339
            + E+ A++++L   R YLYG   I+++ DH+ L +    +  N + +RW   +++Y+CE
Sbjct: 479 IEKEMLAIIWSLDNLRAYLYGAGTIKVYTDHQPLTFALGNRNFNAKLKRWKARIEEYNCE 538

BLAST of Cmc11g0289941 vs. ExPASy Swiss-Prot
Match: P10401 (Retrovirus-related Pol polyprotein from transposon gypsy OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 1.8e-57
Identity = 131/385 (34.03%), Postives = 211/385 (54.81%), Query Frame = 0

Query: 2   RLCIDYRELNKVTVKNRYLLPRIDDLFDQLQGATIFSKIDMRSGYHQLRIKDSDIPKTAF 61
           RL ID+R+LN+ T+ +RY +P I  +   L  A  F+ +D++SGYHQ+ + + D  KT+F
Sbjct: 238 RLVIDFRKLNEKTIPDRYPMPSIPMILANLGKAKFFTTLDLKSGYHQIYLAEHDREKTSF 297

Query: 62  RSRYRHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDTFVIVFIDDILIYSKTEAEHEEHL 121
                 YEF  + FGL NA ++F   ++ V ++ +     V++DD++I+S+ E++H  H+
Sbjct: 298 SVNGGKYEFCRLPFGLRNASSIFQRALDDVLREQIGKICYVYVDDVIIFSENESDHVRHI 357

Query: 122 HQVLETL-----RANKLYAKFSKLS----EFLWTQQRLKRLP--------------VSEI 181
             VL+ L     R ++   +F K S     F+ ++   K  P              V ++
Sbjct: 358 DTVLKCLIDANMRVSQEKTRFFKESVEYLGFIVSKDGTKSDPEKVKAIQEYPEPDCVYKV 417

Query: 182 NSFLGLTGYYRRFVEDFSRIASPLTQLTR-----------KGTPFIWNPACEGSFQELKQ 241
            SFLGL  YYR F++DF+ IA P+T + +           K  P  +N     +FQ L+ 
Sbjct: 418 RSFLGLASYYRVFIKDFAAIARPITDILKGENGSVSKHMSKKIPVEFNETQRNAFQRLRN 477

Query: 242 KLVSTPV-LTVPDGSRSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLE 301
            L S  V L  PD  + F + +DAS  G+G VL Q+G+ +   SR LK  EQNY T++ E
Sbjct: 478 ILASEDVILKYPDFKKPFDLTTDASASGIGAVLSQEGRPITMISRTLKQPEQNYATNERE 537

Query: 302 LAAVVFALKIWRHYLYGEK-IQIFPDHKSLKYFFTQKELNIRQRRWLELVKDYDCEILYH 351
           L A+V+AL   +++LYG + I IF DH+ L +    +  N + +RW   +  ++ ++ Y 
Sbjct: 538 LLAIVWALGKLQNFLYGSREINIFTDHQPLTFAVADRNTNAKIKRWKSYIDQHNAKVFYK 597

BLAST of Cmc11g0289941 vs. ExPASy Swiss-Prot
Match: Q99315 (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3)

HSP 1 Score: 218.0 bits (554), Expect = 1.7e-55
Identity = 135/386 (34.97%), Postives = 207/386 (53.63%), Query Frame = 0

Query: 2    RLCIDYRELNKVTVKNRYLLPRIDDLFDQLQGATIFSKIDMRSGYHQLRIKDSDIPKTAF 61
            RLC+DYR LNK T+ + + LPRID+L  ++  A IF+ +D+ SGYHQ+ ++  D  KTAF
Sbjct: 647  RLCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQIFTTLDLHSGYHQIPMEPKDRYKTAF 706

Query: 62   RSRYRHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDTFVIVFIDDILIYSKTEAEHEEHL 121
             +    YE+ VM FGL NAP+ F   M   F+D    FV V++DDILI+S++  EH +HL
Sbjct: 707  VTPSGKYEYTVMPFGLVNAPSTFARYMADTFRDL--RFVNVYLDDILIFSESPEEHWKHL 766

Query: 122  HQVLETLRANKLYAKFSKL------SEFLWTQQRLKRL-----------------PVSEI 181
              VLE L+   L  K  K       +EFL     ++++                  V + 
Sbjct: 767  DTVLERLKNENLIVKKKKCKFASEETEFLGYSIGIQKIAPLQHKCAAIRDFPTPKTVKQA 826

Query: 182  NSFLGLTGYYRRFVEDFSRIASPLTQLTRKGTPFIWNPACEGSFQELKQKLVSTPVLTVP 241
              FLG+  YYRRF+ + S+IA P+       +   W    + +  +LK  L ++PVL   
Sbjct: 827  QRFLGMINYYRRFIPNCSKIAQPIQLFICDKSQ--WTEKQDKAIDKLKDALCNSPVLVPF 886

Query: 242  DGSRSFVIYSDASKKGLGCVLMQQGK------VVAYASRQLKSHEQNYPTHDLELAAVVF 301
            +   ++ + +DASK G+G VL +         VV Y S+ L+S ++NYP  +LEL  ++ 
Sbjct: 887  NNKANYRLTTDASKDGIGAVLEEVDNKNKLVGVVGYFSKSLESAQKNYPAGELELLGIIK 946

Query: 302  ALKIWRHYLYGEKIQIFPDHKSLKYFFTQKELNIRQRRWLELVKDYDCEILYHPGKANVV 359
            AL  +R+ L+G+   +  DH SL     + E   R +RWL+ +  YD  + Y  G  NVV
Sbjct: 947  ALHHFRYMLHGKHFTLRTDHISLLSLQNKNEPARRVQRWLDDLATYDFTLEYLAGPKNVV 1006

BLAST of Cmc11g0289941 vs. ExPASy TrEMBL
Match: A0A5D3BTN0 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G001560 PE=4 SV=1)

HSP 1 Score: 608.2 bits (1567), Expect = 2.2e-170
Identity = 308/371 (83.02%), Postives = 321/371 (86.52%), Query Frame = 0

Query: 1    MRLCIDYRELNKVTVKNRYLLPRIDDLFDQLQGATIFSKIDMRSGYHQLRIKDSDIPKTA 60
            MRLCIDYRELNKVTVKNRY LPRIDDLFDQLQGAT+FSKID+RSGYHQLRI+D DIPKTA
Sbjct: 978  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTA 1037

Query: 61   FRSRYRHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDTFVIVFIDDILIYSKTEAEHEEH 120
            FRSRY HYEF+VMSFGLTNAPAVFMDLMNRVFKDFLD+FVIVFIDDILIYSKTEAEHEEH
Sbjct: 1038 FRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEH 1097

Query: 121  LHQVLETLRANKLYAKFSKLSEFL---------------------------WTQQRLKRL 180
            LHQVLETLRANKLYAKFSK   +L                           WT+      
Sbjct: 1098 LHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPS---- 1157

Query: 181  PVSEINSFLGLTGYYRRFVEDFSRIASPLTQLTRKGTPFIWNPACEGSFQELKQKLVSTP 240
             VSEI SFLGL GYYRRFVEDFSRIASPLTQLTRKGTPF+W+PACE SFQELKQKLV+ P
Sbjct: 1158 TVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAP 1217

Query: 241  VLTVPDGSRSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFA 300
            VLTVPDGS +FVIYSDASKKGLGCVLMQQGKVVAYASRQLK HEQNYPTHDLELAAVVFA
Sbjct: 1218 VLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFA 1277

Query: 301  LKIWRHYLYGEKIQIFPDHKSLKYFFTQKELNIRQRRWLELVKDYDCEILYHPGKANVVA 345
            LKIWRHYLYGEKIQI+ DHKSLKYFFTQKELN+RQRRWLELVKDYDCEILYHPGKANVVA
Sbjct: 1278 LKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVA 1337

BLAST of Cmc11g0289941 vs. ExPASy TrEMBL
Match: A0A5A7SIJ5 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold34G003210 PE=4 SV=1)

HSP 1 Score: 608.2 bits (1567), Expect = 2.2e-170
Identity = 308/371 (83.02%), Postives = 321/371 (86.52%), Query Frame = 0

Query: 1    MRLCIDYRELNKVTVKNRYLLPRIDDLFDQLQGATIFSKIDMRSGYHQLRIKDSDIPKTA 60
            MRLCIDYRELNKVTVKNRY LPRIDDLFDQLQGAT+FSKID+RSGYHQLRI+D DIPKTA
Sbjct: 641  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTA 700

Query: 61   FRSRYRHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDTFVIVFIDDILIYSKTEAEHEEH 120
            FRSRY HYEF+VMSFGLTNAPAVFMDLMNRVFKDFLD+FVIVFIDDILIYSKTEAEHEEH
Sbjct: 701  FRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEH 760

Query: 121  LHQVLETLRANKLYAKFSKLSEFL---------------------------WTQQRLKRL 180
            LHQVLETLRANKLYAKFSK   +L                           WT+      
Sbjct: 761  LHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPS---- 820

Query: 181  PVSEINSFLGLTGYYRRFVEDFSRIASPLTQLTRKGTPFIWNPACEGSFQELKQKLVSTP 240
             VSEI SFLGL GYYRRFVEDFSRIASPLTQLTRKGTPF+W+PACE SFQELKQKLV+ P
Sbjct: 821  TVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAP 880

Query: 241  VLTVPDGSRSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFA 300
            VLTVPDGS +FVIYSDASKKGLGCVLMQQGKVVAYASRQLK HEQNYPTHDLELAAVVFA
Sbjct: 881  VLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFA 940

Query: 301  LKIWRHYLYGEKIQIFPDHKSLKYFFTQKELNIRQRRWLELVKDYDCEILYHPGKANVVA 345
            LKIWRHYLYGEKIQI+ DHKSLKYFFTQKELN+RQRRWLELVKDYDCEILYHPGKANVVA
Sbjct: 941  LKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVA 1000

BLAST of Cmc11g0289941 vs. ExPASy TrEMBL
Match: A0A5D3C6W3 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G001930 PE=4 SV=1)

HSP 1 Score: 608.2 bits (1567), Expect = 2.2e-170
Identity = 308/371 (83.02%), Postives = 321/371 (86.52%), Query Frame = 0

Query: 1   MRLCIDYRELNKVTVKNRYLLPRIDDLFDQLQGATIFSKIDMRSGYHQLRIKDSDIPKTA 60
           MRLCIDYRELNKVTVKNRY LPRIDDLFDQLQGAT+FSKID+RSGYHQLRI+D DIPKTA
Sbjct: 596 MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTA 655

Query: 61  FRSRYRHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDTFVIVFIDDILIYSKTEAEHEEH 120
           FRSRY HYEF+VMSFGLTNAPAVFMDLMNRVFKDFLD+FVIVFIDDILIYSKTEAEHEEH
Sbjct: 656 FRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEH 715

Query: 121 LHQVLETLRANKLYAKFSKLSEFL---------------------------WTQQRLKRL 180
           LHQVLETLRANKLYAKFSK   +L                           WT+      
Sbjct: 716 LHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPS---- 775

Query: 181 PVSEINSFLGLTGYYRRFVEDFSRIASPLTQLTRKGTPFIWNPACEGSFQELKQKLVSTP 240
            VSEI SFLGL GYYRRFVEDFSRIASPLTQLTRKGTPF+W+PACE SFQELKQKLV+ P
Sbjct: 776 TVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAP 835

Query: 241 VLTVPDGSRSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFA 300
           VLTVPDGS +FVIYSDASKKGLGCVLMQQGKVVAYASRQLK HEQNYPTHDLELAAVVFA
Sbjct: 836 VLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFA 895

Query: 301 LKIWRHYLYGEKIQIFPDHKSLKYFFTQKELNIRQRRWLELVKDYDCEILYHPGKANVVA 345
           LKIWRHYLYGEKIQI+ DHKSLKYFFTQKELN+RQRRWLELVKDYDCEILYHPGKANVVA
Sbjct: 896 LKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVA 955

BLAST of Cmc11g0289941 vs. ExPASy TrEMBL
Match: A0A5A7V2A0 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold154G001000 PE=4 SV=1)

HSP 1 Score: 608.2 bits (1567), Expect = 2.2e-170
Identity = 308/371 (83.02%), Postives = 321/371 (86.52%), Query Frame = 0

Query: 1    MRLCIDYRELNKVTVKNRYLLPRIDDLFDQLQGATIFSKIDMRSGYHQLRIKDSDIPKTA 60
            MRLCIDYRELNKVTVKNRY LPRIDDLFDQLQGAT+FSKID+RSGYHQLRI+D DIPKTA
Sbjct: 1024 MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTA 1083

Query: 61   FRSRYRHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDTFVIVFIDDILIYSKTEAEHEEH 120
            FRSRY HYEF+VMSFGLTNAPAVFMDLMNRVFKDFLD+FVIVFIDDILIYSKTEAEHEEH
Sbjct: 1084 FRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEH 1143

Query: 121  LHQVLETLRANKLYAKFSKLSEFL---------------------------WTQQRLKRL 180
            LHQVLETLRANKLYAKFSK   +L                           WT+      
Sbjct: 1144 LHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPS---- 1203

Query: 181  PVSEINSFLGLTGYYRRFVEDFSRIASPLTQLTRKGTPFIWNPACEGSFQELKQKLVSTP 240
             VSEI SFLGL GYYRRFVEDFSRIASPLTQLTRKGTPF+W+PACE SFQELKQKLV+ P
Sbjct: 1204 TVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAP 1263

Query: 241  VLTVPDGSRSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFA 300
            VLTVPDGS +FVIYSDASKKGLGCVLMQQGKVVAYASRQLK HEQNYPTHDLELAAVVFA
Sbjct: 1264 VLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFA 1323

Query: 301  LKIWRHYLYGEKIQIFPDHKSLKYFFTQKELNIRQRRWLELVKDYDCEILYHPGKANVVA 345
            LKIWRHYLYGEKIQI+ DHKSLKYFFTQKELN+RQRRWLELVKDYDCEILYHPGKANVVA
Sbjct: 1324 LKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVA 1383

BLAST of Cmc11g0289941 vs. ExPASy TrEMBL
Match: A0A5D3DA59 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold237G00060 PE=4 SV=1)

HSP 1 Score: 608.2 bits (1567), Expect = 2.2e-170
Identity = 308/371 (83.02%), Postives = 321/371 (86.52%), Query Frame = 0

Query: 1    MRLCIDYRELNKVTVKNRYLLPRIDDLFDQLQGATIFSKIDMRSGYHQLRIKDSDIPKTA 60
            MRLCIDYRELNKVTVKNRY LPRIDDLFDQLQGAT+FSKID+RSGYHQLRI+D DIPKTA
Sbjct: 977  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTA 1036

Query: 61   FRSRYRHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDTFVIVFIDDILIYSKTEAEHEEH 120
            FRSRY HYEF+VMSFGLTNAPAVFMDLMNRVFKDFLD+FVIVFIDDILIYSKTEAEHEEH
Sbjct: 1037 FRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEH 1096

Query: 121  LHQVLETLRANKLYAKFSKLSEFL---------------------------WTQQRLKRL 180
            LHQVLETLRANKLYAKFSK   +L                           WT+      
Sbjct: 1097 LHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPS---- 1156

Query: 181  PVSEINSFLGLTGYYRRFVEDFSRIASPLTQLTRKGTPFIWNPACEGSFQELKQKLVSTP 240
             VSEI SFLGL GYYRRFVEDFSRIASPLTQLTRKGTPF+W+PACE SFQELKQKLV+ P
Sbjct: 1157 TVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAP 1216

Query: 241  VLTVPDGSRSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFA 300
            VLTVPDGS +FVIYSDASKKGLGCVLMQQGKVVAYASRQLK HEQNYPTHDLELAAVVFA
Sbjct: 1217 VLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFA 1276

Query: 301  LKIWRHYLYGEKIQIFPDHKSLKYFFTQKELNIRQRRWLELVKDYDCEILYHPGKANVVA 345
            LKIWRHYLYGEKIQI+ DHKSLKYFFTQKELN+RQRRWLELVKDYDCEILYHPGKANVVA
Sbjct: 1277 LKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVA 1336

BLAST of Cmc11g0289941 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 64.7 bits (156), Expect = 1.7e-10
Identity = 30/70 (42.86%), Postives = 44/70 (62.86%), Query Frame = 0

Query: 156 SEINSFLGLTGYYRRFVEDFSRIASPLTQLTRKGTPFIWNPACEGSFQELKQKLVSTPVL 215
           +E+  FLGLTGYYRRFV+++ +I  PLT+L +K +   W      +F+ LK  + + PVL
Sbjct: 64  TELRGFLGLTGYYRRFVKNYGKIVRPLTELLKKNS-LKWTEMAALAFKALKGAVTTLPVL 123

Query: 216 TVPDGSRSFV 226
            +PD    FV
Sbjct: 124 ALPDLKLPFV 132

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
TYK20443.14.5e-17083.02pol protein [Cucumis melo var. makuwa][more]
KAA0025998.14.5e-17083.02pol protein [Cucumis melo var. makuwa][more]
TYK01576.14.5e-17083.02pol protein [Cucumis melo var. makuwa][more]
TYK06888.14.5e-17083.02pol protein [Cucumis melo var. makuwa][more]
KAA0062342.14.5e-17083.02pol protein [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
P043233.7e-6636.59Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogast... [more]
P208251.6e-6135.25Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste... [more]
Q8I7P91.6e-6134.75Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogast... [more]
P104011.8e-5734.03Retrovirus-related Pol polyprotein from transposon gypsy OS=Drosophila melanogas... [more]
Q993151.7e-5534.97Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20... [more]
Match NameE-valueIdentityDescription
A0A5D3BTN02.2e-17083.02Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold45... [more]
A0A5A7SIJ52.2e-17083.02Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold34... [more]
A0A5D3C6W32.2e-17083.02Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13... [more]
A0A5A7V2A02.2e-17083.02Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold15... [more]
A0A5D3DA592.2e-17083.02Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold23... [more]
Match NameE-valueIdentityDescription
ATMG00860.11.7e-1042.86DNA/RNA polymerases superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR041373Reverse transcriptase, RNase H-like domainPFAMPF17917RT_RNaseHcoord: 221..318
e-value: 3.0E-33
score: 114.3
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 3..163
e-value: 3.0E-21
score: 76.0
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 1..166
score: 9.388092
IPR043128Reverse transcriptase/Diguanylate cyclase domainGENE3D3.30.70.270coord: 19..141
e-value: 2.6E-58
score: 198.8
IPR043128Reverse transcriptase/Diguanylate cyclase domainGENE3D3.30.70.270coord: 149..222
e-value: 7.7E-24
score: 85.5
NoneNo IPR availableGENE3D3.10.20.370coord: 223..288
e-value: 1.0E-9
score: 40.2
NoneNo IPR availableGENE3D3.10.10.10HIV Type 1 Reverse Transcriptase, subunit A, domain 1coord: 1..79
e-value: 2.6E-58
score: 198.8
NoneNo IPR availablePANTHERPTHR24559TRANSPOSON TY3-I GAG-POL POLYPROTEINcoord: 24..176
NoneNo IPR availablePANTHERPTHR24559TRANSPOSON TY3-I GAG-POL POLYPROTEINcoord: 153..344
NoneNo IPR availablePANTHERPTHR24559:SF383DNA/RNA POLYMERASES SUPERFAMILY PROTEINcoord: 153..344
NoneNo IPR availablePANTHERPTHR24559:SF383DNA/RNA POLYMERASES SUPERFAMILY PROTEINcoord: 24..176
NoneNo IPR availableCDDcd01647RT_LTRcoord: 2..163
e-value: 1.10437E-70
score: 216.693
NoneNo IPR availableCDDcd09274RNase_HI_RT_Ty3coord: 225..340
e-value: 2.51186E-57
score: 180.381
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 1..324

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc11g0289941.1Cmc11g0289941.1mRNA