Cmc11g0289761 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc11g0289761
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	organ-specific protein P4-like
Location	CMiso1.1chr11: 4371827 .. 4373424 (-)
RNA-Seq Expression	Cmc11g0289761
Synteny	Cmc11g0289761

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTAAAACCAGTTATACGAACAAAAATATATATATTTATTGCTTCTTCTGTCTCTTTAGCTGTGTTGTGAGAGAAACCATAGAGATGAAGCTTTCTATTGCTTTCTTCTTTCTTCTTTCTCTTCTCTTGGTAAGCTTTAATATTTCTTCTTCTTCTTCTTCTTCTTCCTTAATCAATTTCCTTTCAGATATTTATCTTATATATATATATATATGCTTTTGTTCTAATTTGTTGTTTTAATTTTTAAGGATAATTGAAATTGATCAGTTTAGATTTGTGAATATTCATAGCATGATCATCATAAAATCATTGGATCATAATATATATCTTCTTATGATATAGTTTGGGCTTAGTTTTGTATTGATTTTATATGATTTTATAAGTTTTATTAAATTAATTTATTGTGTTAATACCTCAAGGGATACATATGTTTCTGTCTCTCTCACCTATAATTTGTTTTTTTTTTTCTTTCTTACAAAACAGAAAAAAGAAATTTCCTTTTCTCTGATATATATAGTTTGTCTAAAACAGAATCATGAAGTTCTTTTCTTCTTCTTTTCTTTAGGAAAATAGAATATTTTTGTAGTCTTCAATGGAGGAATTTGTGATTAACCAGGCTATTTTTCAAAAACAAAATCTGGGTATTAGTTTTCTGTTTCTTTTTGATGATTTTCTTAGAAATCTAAAAATAAAAAGAAATTTGTTTAATACCTATTTAGGCTTTGTTTATATATATAAATCAAATTAAAGTTTTTCCGTTTTCAAAACTTGATTTGGTTTTTCTAAAACGTCCTTACAACGAAAAAGCAAAAAAAATGGATGGAGTATTTTATAAGCTTAAATTATAAAAATAGAAAAATCTAAAACTAAATAGTCTCTAAACAATCTTCGCATGTAACTTATTTTTGAAGTTACTAAGTAGTAATCAAACAGAAGGGGAAAGACAATAGAATTTGATGGAGTTTGCATTGTTTTTGAATGATGGGGGTATAACAGCTTGGAGATATTGCAATAAGCCATGGCAGAAGCAGGAAAGAAGAAGGAGAATATTGGAAAAAGATAATGAAAGAAGAAGCACTTCCTGAAATGCTTAAAGAGCTATTATTAGAAGATGATGATTCTTCAATAGTGGAGTACAATAATAAGCAACAAAAGGAGCATTTTACGACCAACTTTGATCCTCATCCAAATGCTATAATTTATCATGCCCATGCCCATGCCCATGCCCATAACAGTAACCCCACACTTCCAAATTTATCCCCATGAATTCTTCTTATTTCTCAAACATATCCCTCTAAAAACCACAAAAATGTTTCCTCATTTTAATTATTTATCACACCATATATATATATTTATATTATGTTATTAATTATTATATGTAAATTAATATATTTAGTGTGTGTGGTTTTCTACTTTTCTATAGTTTCGAAAGTTGGAGTGTTATCGTCCCTCAATTGGCTTCTATAGACGTGTTGAAAGTATTGGTGTCGTATAACTATGTATGGCTATGATGTACGCAAACAATGTGGTGCTGATGTAAATTTCCATTATAGGTTATGTTGTTACGTTTTTGCATATATATTATTTTGCATCTG

mRNA sequence

ATGGTTAAAACCAGTTATACGAACAAAAATATATATATTTATTGCTTCTTCTGTCTCTTTAGCTGTGTTGTGAGAGAAACCATAGAGATGAAGCTTTCTATTGCTTTCTTCTTTCTTCTTTCTCTTCTCTTGCTTGGAGATATTGCAATAAGCCATGGCAGAAGCAGGAAAGAAGAAGGAGAATATTGGAAAAAGATAATGAAAGAAGAAGCACTTCCTGAAATGCTTAAAGAGCTATTATTAGAAGATGATGATTCTTCAATAGTGGAGTACAATAATAAGCAACAAAAGGAGCATTTTACGACCAACTTTGATCCTCATCCAAATGCTATAATTTATCATGCCCATGCCCATGCCCATGCCCATAACAGTAACCCCACACTTCCAAATTTATCCCCATGAATTCTTCTTATTTCTCAAACATATCCCTCTAAAAACCACAAAAATGTTTCCTCATTTTAATTATTTATCACACCATATATATATATTTATATTATGTTATTAATTATTATATGTAAATTAATATATTTAGTGTGTGTGGTTTTCTACTTTTCTATAGTTTCGAAAGTTGGAGTGTTATCGTCCCTCAATTGGCTTCTATAGACGTGTTGAAAGTATTGGTGTCGTATAACTATGTATGGCTATGATGTACGCAAACAATGTGGTGCTGATGTAAATTTCCATTATAGGTTATGTTGTTACGTTTTTGCATATATATTATTTTGCATCTG

Coding sequence (CDS)

ATGGTTAAAACCAGTTATACGAACAAAAATATATATATTTATTGCTTCTTCTGTCTCTTTAGCTGTGTTGTGAGAGAAACCATAGAGATGAAGCTTTCTATTGCTTTCTTCTTTCTTCTTTCTCTTCTCTTGCTTGGAGATATTGCAATAAGCCATGGCAGAAGCAGGAAAGAAGAAGGAGAATATTGGAAAAAGATAATGAAAGAAGAAGCACTTCCTGAAATGCTTAAAGAGCTATTATTAGAAGATGATGATTCTTCAATAGTGGAGTACAATAATAAGCAACAAAAGGAGCATTTTACGACCAACTTTGATCCTCATCCAAATGCTATAATTTATCATGCCCATGCCCATGCCCATGCCCATAACAGTAACCCCACACTTCCAAATTTATCCCCATGA

Protein sequence

MVKTSYTNKNIYIYCFFCLFSCVVRETIEMKLSIAFFFLLSLLLLGDIAISHGRSRKEEGEYWKKIMKEEALPEMLKELLLEDDDSSIVEYNNKQQKEHFTTNFDPHPNAIIYHAHAHAHAHNSNPTLPNLSP

Homology

[Close]

BLAST of Cmc11g0289761 vs. NCBI nr
Match: XP_004148852.1 (uncharacterized protein LOC101213460 [Cucumis sativus] >KGN61786.1 hypothetical protein Csa_006572 [Cucumis sativus])

HSP 1 Score: 168.7 bits (426), Expect = 3.4e-38
Identity = 94/107 (87.85%), Postives = 98/107 (91.59%), Query Frame = 0


Query: 30  MKLSIAFFFLLSLLLLGDIAISHGRSRKEEGEYWKKIMKEEALPEMLKELLLE-DDDSSI 89
           MKLSIAFFFLLSLLLLGD  ++HGRSRKEEGEYWKKIMKEEALPEMLKELL+E DD SS+
Sbjct: 1   MKLSIAFFFLLSLLLLGD--LTHGRSRKEEGEYWKKIMKEEALPEMLKELLIEADDPSSM 60

Query: 90  VEY-NNKQQKEHFTTNFDPHPNAIIYHAHAHAHAHNSNPT-LPNLSP 134
           VEY NNKQQKEHF TNFDPHPNAIIY  HAHAHAHNSNPT LPNLSP
Sbjct: 61  VEYNNNKQQKEHFLTNFDPHPNAIIY--HAHAHAHNSNPTALPNLSP 103

[Close]

BLAST of Cmc11g0289761 vs. NCBI nr
Match: XP_038901980.1 (organ-specific protein P4 [Benincasa hispida])

HSP 1 Score: 121.3 bits (303), Expect = 6.2e-24
Identity = 76/111 (68.47%), Postives = 87/111 (78.38%), Query Frame = 0


Query: 30  MKLSIAFF-FLLSLLLLGDIAISHGRSRKEEGEYWKKIMKEEALPEMLKELLLEDDDSSI 89
           MKLS+AFF  LLSLLL+G+  ISHG SRKEEGEYWKKIMK+E +P++LKE LL  DD+S+
Sbjct: 1   MKLSVAFFLLLLSLLLIGE--ISHG-SRKEEGEYWKKIMKDEEIPDILKESLL--DDNSL 60

Query: 90  VEYNNKQQKEHFTTNFDPHPNAIIYHAHAHAHAHNS------NPTLPNLSP 134
           V+ NNK  KEHF TNFDPHPNAIIYH  AHA  HN+      NPTLPN SP
Sbjct: 61  VD-NNK--KEHFMTNFDPHPNAIIYHT-AHASTHNNNHHLKINPTLPNSSP 102

[Close]

BLAST of Cmc11g0289761 vs. NCBI nr
Match: KAG6571127.1 (hypothetical protein SDJN03_30042, partial [Cucurbita argyrosperma subsp. sororia] >KAG7010938.1 hypothetical protein SDJN02_27736, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 114.4 bits (285), Expect = 7.6e-22
Identity = 67/115 (58.26%), Postives = 80/115 (69.57%), Query Frame = 0


Query: 30  MKLSIAFFFLLSLLLLGDIAISHGRSRKEEGEYWKKIMKEEALPEMLKELLLEDDDSSIV 89
           MKLS+AFF LLSL+L  D  +SHG SRK++G+YWKK+MK E +PEMLKELL +D   S+V
Sbjct: 1   MKLSLAFFLLLSLVLFVD--VSHG-SRKDQGKYWKKMMKNEEIPEMLKELLFDD---SMV 60

Query: 90  EYNNKQQKEHFTTNFDPHPNAIIYHAHAHAHAH-----------NSNPTLPNLSP 134
           E     QK+ F  NFDPHPNAIIYHAHAHAH H            SNPT+ N +P
Sbjct: 61  E----NQKQRFMNNFDPHPNAIIYHAHAHAHGHGAATPTRNIDIKSNPTVANSAP 105

[Close]

BLAST of Cmc11g0289761 vs. NCBI nr
Match: XP_022944721.1 (organ-specific protein P4-like [Cucurbita moschata])

HSP 1 Score: 113.6 bits (283), Expect = 1.3e-21
Identity = 66/115 (57.39%), Postives = 80/115 (69.57%), Query Frame = 0


Query: 30  MKLSIAFFFLLSLLLLGDIAISHGRSRKEEGEYWKKIMKEEALPEMLKELLLEDDDSSIV 89
           MKLS+AFF L+SL+L  D  +SHG SRK++G+YWKK+MK E +PEMLKELL +D   S+V
Sbjct: 1   MKLSLAFFLLISLVLFVD--VSHG-SRKDQGKYWKKMMKNEEIPEMLKELLFDD---SMV 60

Query: 90  EYNNKQQKEHFTTNFDPHPNAIIYHAHAHAHAH-----------NSNPTLPNLSP 134
           E     QK+ F  NFDPHPNAIIYHAHAHAH H            SNPT+ N +P
Sbjct: 61  E----NQKQRFMNNFDPHPNAIIYHAHAHAHGHGAATPTRNIDIKSNPTVANSAP 105

[Close]

BLAST of Cmc11g0289761 vs. NCBI nr
Match: XP_022986644.1 (organ-specific protein S2-like [Cucurbita maxima])

HSP 1 Score: 113.2 bits (282), Expect = 1.7e-21
Identity = 67/117 (57.26%), Postives = 80/117 (68.38%), Query Frame = 0


Query: 30  MKLSIAFFFLLSLLLLGDIAISHGRSRKEEGEYWKKIMKEEALPEMLKELLLEDDDSSIV 89
           MKLS+AFF LLSL+L  D  +SHG SRK++G+YWKK+MK E +PEMLKELL +D   S+V
Sbjct: 1   MKLSLAFFLLLSLVLFVD--VSHG-SRKDQGKYWKKMMKNEEIPEMLKELLFDD---SMV 60

Query: 90  EYNNKQQKEHFTTNFDPHPNAIIYHAHAHAHAHNS-------------NPTLPNLSP 134
           E     QK+ F  NFDPHPNAIIYHAHAHAHAH               NPT+ N +P
Sbjct: 61  E----NQKQRFMNNFDPHPNAIIYHAHAHAHAHGHGAATPRRNIDIKFNPTVANSAP 107

[Close]

BLAST of Cmc11g0289761 vs. ExPASy TrEMBL
Match: A0A0A0LP62 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G245500 PE=4 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 1.6e-38
Identity = 94/107 (87.85%), Postives = 98/107 (91.59%), Query Frame = 0


Query: 30  MKLSIAFFFLLSLLLLGDIAISHGRSRKEEGEYWKKIMKEEALPEMLKELLLE-DDDSSI 89
           MKLSIAFFFLLSLLLLGD  ++HGRSRKEEGEYWKKIMKEEALPEMLKELL+E DD SS+
Sbjct: 1   MKLSIAFFFLLSLLLLGD--LTHGRSRKEEGEYWKKIMKEEALPEMLKELLIEADDPSSM 60

Query: 90  VEY-NNKQQKEHFTTNFDPHPNAIIYHAHAHAHAHNSNPT-LPNLSP 134
           VEY NNKQQKEHF TNFDPHPNAIIY  HAHAHAHNSNPT LPNLSP
Sbjct: 61  VEYNNNKQQKEHFLTNFDPHPNAIIY--HAHAHAHNSNPTALPNLSP 103

[Close]

BLAST of Cmc11g0289761 vs. ExPASy TrEMBL
Match: A0A6J1FYV4 (organ-specific protein P4-like OS=Cucurbita moschata OX=3662 GN=LOC111449094 PE=4 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 6.3e-22
Identity = 66/115 (57.39%), Postives = 80/115 (69.57%), Query Frame = 0


Query: 30  MKLSIAFFFLLSLLLLGDIAISHGRSRKEEGEYWKKIMKEEALPEMLKELLLEDDDSSIV 89
           MKLS+AFF L+SL+L  D  +SHG SRK++G+YWKK+MK E +PEMLKELL +D   S+V
Sbjct: 1   MKLSLAFFLLISLVLFVD--VSHG-SRKDQGKYWKKMMKNEEIPEMLKELLFDD---SMV 60

Query: 90  EYNNKQQKEHFTTNFDPHPNAIIYHAHAHAHAH-----------NSNPTLPNLSP 134
           E     QK+ F  NFDPHPNAIIYHAHAHAH H            SNPT+ N +P
Sbjct: 61  E----NQKQRFMNNFDPHPNAIIYHAHAHAHGHGAATPTRNIDIKSNPTVANSAP 105

[Close]

BLAST of Cmc11g0289761 vs. ExPASy TrEMBL
Match: A0A6J1JGL9 (organ-specific protein S2-like OS=Cucurbita maxima OX=3661 GN=LOC111484322 PE=4 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 8.2e-22
Identity = 67/117 (57.26%), Postives = 80/117 (68.38%), Query Frame = 0


Query: 30  MKLSIAFFFLLSLLLLGDIAISHGRSRKEEGEYWKKIMKEEALPEMLKELLLEDDDSSIV 89
           MKLS+AFF LLSL+L  D  +SHG SRK++G+YWKK+MK E +PEMLKELL +D   S+V
Sbjct: 1   MKLSLAFFLLLSLVLFVD--VSHG-SRKDQGKYWKKMMKNEEIPEMLKELLFDD---SMV 60

Query: 90  EYNNKQQKEHFTTNFDPHPNAIIYHAHAHAHAHNS-------------NPTLPNLSP 134
           E     QK+ F  NFDPHPNAIIYHAHAHAHAH               NPT+ N +P
Sbjct: 61  E----NQKQRFMNNFDPHPNAIIYHAHAHAHAHGHGAATPRRNIDIKFNPTVANSAP 107

[Close]

BLAST of Cmc11g0289761 vs. ExPASy TrEMBL
Match: A0A6J1G7K5 (organ-specific protein P4-like OS=Cucurbita moschata OX=3662 GN=LOC111451468 PE=4 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 7.2e-18
Identity = 57/101 (56.44%), Postives = 71/101 (70.30%), Query Frame = 0


Query: 30  MKLSIAFFFLLSLLLLGDIAISHGRSRKEEGEYWKKIMKEEALPEMLKELLLEDDDSSIV 89
           MKLS AFF L  +LL     +SH  +RKE+GEYWKK+MK+EA+PEMLKELL +DD  S+V
Sbjct: 1   MKLSAAFFLLFLILLAN---VSH--ARKEKGEYWKKVMKDEAIPEMLKELLFDDD--SLV 60

Query: 90  EYNNKQQKEHFTTNFDPHPNAIIYHAHAHAHAHNSNPTLPN 131
             ++  Q EHF  NFD HPNAIIYH+H   H H  + T P+
Sbjct: 61  --SSDAQSEHFMNNFDTHPNAIIYHSHGATHDHPGHKTKPS 92

[Close]

BLAST of Cmc11g0289761 vs. ExPASy TrEMBL
Match: A0A6J1L3N5 (organ-specific protein P4-like OS=Cucurbita maxima OX=3661 GN=LOC111499606 PE=4 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 2.7e-17
Identity = 57/98 (58.16%), Postives = 71/98 (72.45%), Query Frame = 0


Query: 30  MKLSIAFFFLLSLLLLGDIAISHGRSRKEEGEYWKKIMKEEALPEMLKELLLEDDDSSIV 89
           MKLS A FFLLSLLLL +++     +RKE+GEYWKK+MK+EA+PEMLKELL +DD  S+V
Sbjct: 1   MKLSAA-FFLLSLLLLANVS----HARKEKGEYWKKVMKDEAIPEMLKELLFDDD--SLV 60

Query: 90  EYNNKQQKEHFTTNFDPHPNAIIYHAHAHAHAHNSNPT 128
             ++  Q E F  NFD HPNAIIYH+H   H H  + T
Sbjct: 61  --SSDAQSERFMNNFDTHPNAIIYHSHGATHDHPGHKT 89

[Close]

BLAST of Cmc11g0289761 vs. TAIR 10
Match: AT1G49310.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, petal differentiation and expansion stage; Has 11 Blast hits to 11 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 11; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 50.1 bits (118), Expect = 1.6e-06
Identity = 35/88 (39.77%), Postives = 45/88 (51.14%), Query Frame = 0


Query: 29  EMKLSIAFFFLLSLLLLGDIAISHGRSRKEEGEYWKKIMKEEALPEMLKELLLEDDDSSI 88
           + +  + F  LLS LL   + +S GR+     EYWKK+MK E LPE +KELL        
Sbjct: 4   QQRYLVVFIVLLSFLLF--VNLSEGRTGGVAEEYWKKMMKNEPLPEPIKELL-------- 63

Query: 89  VEYNN--KQQKEHFTTNFDPHPNAIIYH 115
              NN  +  +E F  NFD     IIYH
Sbjct: 64  ---NNPFRTAQERFIQNFDTKSVVIIYH 78

The following BLAST results are available for this feature:

BLAST of Cmc11g0289761 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004148852.1	3.4e-38	87.85	uncharacterized protein LOC101213460 [Cucumis sativus] >KGN61786.1 hypothetical ...	[more]
XP_038901980.1	6.2e-24	68.47	organ-specific protein P4 [Benincasa hispida]	[more]
KAG6571127.1	7.6e-22	58.26	hypothetical protein SDJN03_30042, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022944721.1	1.3e-21	57.39	organ-specific protein P4-like [Cucurbita moschata]	[more]
XP_022986644.1	1.7e-21	57.26	organ-specific protein S2-like [Cucurbita maxima]	[more]

BLAST of Cmc11g0289761 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Cmc11g0289761 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LP62	1.6e-38	87.85	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G245500 PE=4 SV=1	[more]
A0A6J1FYV4	6.3e-22	57.39	organ-specific protein P4-like OS=Cucurbita moschata OX=3662 GN=LOC111449094 PE=...	[more]
A0A6J1JGL9	8.2e-22	57.26	organ-specific protein S2-like OS=Cucurbita maxima OX=3661 GN=LOC111484322 PE=4 ...	[more]
A0A6J1G7K5	7.2e-18	56.44	organ-specific protein P4-like OS=Cucurbita moschata OX=3662 GN=LOC111451468 PE=...	[more]
A0A6J1L3N5	2.7e-17	58.16	organ-specific protein P4-like OS=Cucurbita maxima OX=3661 GN=LOC111499606 PE=4 ...	[more]

BLAST of Cmc11g0289761 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G49310.1	1.6e-06	39.77	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR024489	Organ specific protein	PFAM	PF10950	Organ_specific	coord: 57..119 e-value: 1.6E-9 score: 38.5
None	No IPR available	PANTHER	PTHR33731	PROTEIN, PUTATIVE-RELATED	coord: 30..119
None	No IPR available	PANTHER	PTHR33731:SF2	PROTEIN, PUTATIVE-RELATED	coord: 30..119

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc11g0289761.1	Cmc11g0289761.1	mRNA