Cmc11g0289591 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc11g0289591
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Location	CMiso1.1chr11: 4179986 .. 4181023 (-)
RNA-Seq Expression	Cmc11g0289591
Synteny	Cmc11g0289591

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCGTGCTGAGCGCAAACATCGCCATATTCTTGACTCAGTACGTGGCCTCCTTCTTTCTGCCTCATGCTCTGAGAAATTTTGGGGTGAAGCAGCTCTTACATCAGTCTATACCATCAACCATCAACCGTCTTCCTTCTTCTGTTCTTCAGAACATCTCTTCATTCGAAAGATTACATGGTACTCCTCCTAACTACTCTAACCTTAAAGTTTTTGGTTGTGCATGCTTTGTTCTCCTACATCCTCATGAACACACTAAACTTGAACCACGTGCCCGTCTCTATTGTTTCCTTGGCTATGGCACCGAACATAAAGGTTTTCGTTGTTGGGATCCTCTTTCCAATAGACTTCGTATATCTCGCCATGTCACATTTTGGGAGCACATTATGTTCTCTCACTTGTCCTCTTTCCACTCCTCCTTCTCTAGTCCTCAACCTCTCTTCACCGATACCTCTGTTGAACTTTTTCCTCTCTCTAAATCCACTCTTCATATTGAGCTTACTCAATCTGCACCTACTTCTGCAAACTCAAACCAATCGTCCGTCTCTGATGATGGTCCTGAACCTACTTCAGACACCCCTCCTCGTCGTTCTACTCGGGTAAGAGAACCTCCCATCCATCTCCAAGATTATCACTGTTTTTCCACTATTGTTTCCCTTGTTGAACCTACCTCTTATCAAGAGGCTAGTACTGACCCTTTATGGCAGAAAGCGATGAATGATGAATTACAGGCTCTTGACAAGACATACACTTGGGACTATGTTGACTTACCTCCTGGCAAAAGACCCATTGGTTGCAAGTGGATCTACAAGATCAAGACTCACTCCGATGATACTATTAAGCGTTATAAAGCTCGTCTTATTGCAAAAGGATATTCGCAAAAATATGGTATTGACTATGAAGAAACATTTGCTCCTGTGGCTCGGATGACATCTATTCGAAGTTTGTTAGCTGTTGCTGCTGCCAAGCAATGGCCTCTCCTTCAGATGGATGTCAAAAATGCTTTCCTTAATAGGACTCTTTCTGAAGAAGTCTAA

mRNA sequence

ATGGGCGTGCTGAGCGCAAACATCGCCATATTCTTGACTCAGTACGTGGCCTCCTTCTTTCTGCCTCATGCTCTGAGAAATTTTGGGGTGAAGCAGCTCTTACATCAGTCTATACCATCAACCATCAACCGTCTTCCTTCTTCTGTTCTTCAGAACATCTCTTCATTCGAAAGATTACATGGTACTCCTCCTAACTACTCTAACCTTAAAGTTTTTGGTTGTGCATGCTTTGTTCTCCTACATCCTCATGAACACACTAAACTTGAACCACGTGCCCGTCTCTATTGTTTCCTTGGCTATGGCACCGAACATAAAGGTTTTCGTTGTTGGGATCCTCTTTCCAATAGACTTCGTATATCTCGCCATGTCACATTTTGGGAGCACATTATGTTCTCTCACTTGTCCTCTTTCCACTCCTCCTTCTCTAGTCCTCAACCTCTCTTCACCGATACCTCTGTTGAACTTTTTCCTCTCTCTAAATCCACTCTTCATATTGAGCTTACTCAATCTGCACCTACTTCTGCAAACTCAAACCAATCGTCCGTCTCTGATGATGGTCCTGAACCTACTTCAGACACCCCTCCTCGTCGTTCTACTCGGGTAAGAGAACCTCCCATCCATCTCCAAGATTATCACTGTTTTTCCACTATTGTTTCCCTTGTTGAACCTACCTCTTATCAAGAGGCTAGTACTGACCCTTTATGGCAGAAAGCGATGAATGATGAATTACAGGCTCTTGACAAGACATACACTTGGGACTATGTTGACTTACCTCCTGGCAAAAGACCCATTGGTTGCAAGTGGATCTACAAGATCAAGACTCACTCCGATGATACTATTAAGCGTTATAAAGCTCGTCTTATTGCAAAAGGATATTCGCAAAAATATGGTATTGACTATGAAGAAACATTTGCTCCTGTGGCTCGGATGACATCTATTCGAAGTTTGTTAGCTGTTGCTGCTGCCAAGCAATGGCCTCTCCTTCAGATGGATGTCAAAAATGCTTTCCTTAATAGGACTCTTTCTGAAGAAGTCTAA

Coding sequence (CDS)

ATGGGCGTGCTGAGCGCAAACATCGCCATATTCTTGACTCAGTACGTGGCCTCCTTCTTTCTGCCTCATGCTCTGAGAAATTTTGGGGTGAAGCAGCTCTTACATCAGTCTATACCATCAACCATCAACCGTCTTCCTTCTTCTGTTCTTCAGAACATCTCTTCATTCGAAAGATTACATGGTACTCCTCCTAACTACTCTAACCTTAAAGTTTTTGGTTGTGCATGCTTTGTTCTCCTACATCCTCATGAACACACTAAACTTGAACCACGTGCCCGTCTCTATTGTTTCCTTGGCTATGGCACCGAACATAAAGGTTTTCGTTGTTGGGATCCTCTTTCCAATAGACTTCGTATATCTCGCCATGTCACATTTTGGGAGCACATTATGTTCTCTCACTTGTCCTCTTTCCACTCCTCCTTCTCTAGTCCTCAACCTCTCTTCACCGATACCTCTGTTGAACTTTTTCCTCTCTCTAAATCCACTCTTCATATTGAGCTTACTCAATCTGCACCTACTTCTGCAAACTCAAACCAATCGTCCGTCTCTGATGATGGTCCTGAACCTACTTCAGACACCCCTCCTCGTCGTTCTACTCGGGTAAGAGAACCTCCCATCCATCTCCAAGATTATCACTGTTTTTCCACTATTGTTTCCCTTGTTGAACCTACCTCTTATCAAGAGGCTAGTACTGACCCTTTATGGCAGAAAGCGATGAATGATGAATTACAGGCTCTTGACAAGACATACACTTGGGACTATGTTGACTTACCTCCTGGCAAAAGACCCATTGGTTGCAAGTGGATCTACAAGATCAAGACTCACTCCGATGATACTATTAAGCGTTATAAAGCTCGTCTTATTGCAAAAGGATATTCGCAAAAATATGGTATTGACTATGAAGAAACATTTGCTCCTGTGGCTCGGATGACATCTATTCGAAGTTTGTTAGCTGTTGCTGCTGCCAAGCAATGGCCTCTCCTTCAGATGGATGTCAAAAATGCTTTCCTTAATAGGACTCTTTCTGAAGAAGTCTAA

Protein sequence

MGVLSANIAIFLTQYVASFFLPHALRNFGVKQLLHQSIPSTINRLPSSVLQNISSFERLHGTPPNYSNLKVFGCACFVLLHPHEHTKLEPRARLYCFLGYGTEHKGFRCWDPLSNRLRISRHVTFWEHIMFSHLSSFHSSFSSPQPLFTDTSVELFPLSKSTLHIELTQSAPTSANSNQSSVSDDGPEPTSDTPPRRSTRVREPPIHLQDYHCFSTIVSLVEPTSYQEASTDPLWQKAMNDELQALDKTYTWDYVDLPPGKRPIGCKWIYKIKTHSDDTIKRYKARLIAKGYSQKYGIDYEETFAPVARMTSIRSLLAVAAAKQWPLLQMDVKNAFLNRTLSEEV

Homology

[Close]

BLAST of Cmc11g0289591 vs. NCBI nr
Match: TYJ98155.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 563.5 bits (1451), Expect = 1.2e-156
Identity = 269/305 (88.20%), Postives = 285/305 (93.44%), Query Frame = 0


Query: 41  TINRLPSSVLQNISSFERLHGTPPNYSNLKVFGCACFVLLHPHEHTKLEPRARLYCFLGY 100
           +INRLPSSVLQNIS FE+L+GTPPNYSNLK FGCACFVLLHPHEHTKLEPRARL CFLGY
Sbjct: 486 SINRLPSSVLQNISPFEKLYGTPPNYSNLKTFGCACFVLLHPHEHTKLEPRARLCCFLGY 545

Query: 101 GTEHKGFRCWDPLSNRLRISRHVTFWEHIMFSHLSSFHSSFSSPQPLFTDTSVELFPLSK 160
           GTEHKGF CWDPLSNRLRISRHVTFWEH MFS LSSFH+SFSSPQP FTDTS++LFP S+
Sbjct: 546 GTEHKGFHCWDPLSNRLRISRHVTFWEHTMFSRLSSFHTSFSSPQPFFTDTSIDLFPPSE 605

Query: 161 STLHIELTQSAPTSANSNQSSVSDDGPEPTSDTPPRRSTRVREPPIHLQDYHCFSTIVSL 220
           S L  EL QSAPTSA S+QSS+ DD PEPT DTPP RSTRVREPPIHLQDYHCFSTI+SL
Sbjct: 606 SPLGNELAQSAPTSAISDQSSIPDDSPEPTPDTPPSRSTRVREPPIHLQDYHCFSTIISL 665

Query: 221 VEPTSYQEASTDPLWQKAMNDELQALDKTYTWDYVDLPPGKRPIGCKWIYKIKTHSDDTI 280
           VEPTSYQEASTDPLWQKAMNDELQAL+KT+TWDYVDLPPGKRPIGCKWIYKIKTHSD TI
Sbjct: 666 VEPTSYQEASTDPLWQKAMNDELQALEKTHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTI 725

Query: 281 KRYKARLIAKGYSQKYGIDYEETFAPVARMTSIRSLLAVAAAKQWPLLQMDVKNAFLNRT 340
           +RYKARL+AKGYSQ+YGIDYEETFAPVARMTS+RSLLAVAAAKQWPLLQMDVKN FLN T
Sbjct: 726 ERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAVAAAKQWPLLQMDVKNVFLNGT 785

Query: 341 LSEEV 346
           LSEEV
Sbjct: 786 LSEEV 790

[Close]

BLAST of Cmc11g0289591 vs. NCBI nr
Match: TYK19656.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 562.0 bits (1447), Expect = 3.6e-156
Identity = 270/305 (88.52%), Postives = 285/305 (93.44%), Query Frame = 0


Query: 41  TINRLPSSVLQNISSFERLHGTPPNYSNLKVFGCACFVLLHPHEHTKLEPRARLYCFLGY 100
           TINRLPSSVLQNIS FERL+GTPPNYSNLKVFGCACFVLL PHEHTKLEPRARL CFLGY
Sbjct: 645 TINRLPSSVLQNISPFERLYGTPPNYSNLKVFGCACFVLLQPHEHTKLEPRARLCCFLGY 704

Query: 101 GTEHKGFRCWDPLSNRLRISRHVTFWEHIMFSHLSSFHSSFSSPQPLFTDTSVELFPLSK 160
           GTEHKGFRCWDPLSNRLRISRHVTFWEH MFS LSSFH+SFSSPQ  FTDTS++LFPLS+
Sbjct: 705 GTEHKGFRCWDPLSNRLRISRHVTFWEHTMFSRLSSFHASFSSPQSFFTDTSIDLFPLSE 764

Query: 161 STLHIELTQSAPTSANSNQSSVSDDGPEPTSDTPPRRSTRVREPPIHLQDYHCFSTIVSL 220
           ST   EL QSAPTSA S+QSS+SD  P+P  D PPRRSTRVREPPIHLQDYHCFSTIVSL
Sbjct: 765 STPGNELAQSAPTSATSDQSSISDGNPDPPPDIPPRRSTRVREPPIHLQDYHCFSTIVSL 824

Query: 221 VEPTSYQEASTDPLWQKAMNDELQALDKTYTWDYVDLPPGKRPIGCKWIYKIKTHSDDTI 280
           +EPTSYQEASTDPLWQKAMNDELQAL+K +TWDYVDLPPGKRPIGCKWIYKIKTHSD TI
Sbjct: 825 IEPTSYQEASTDPLWQKAMNDELQALEKMHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTI 884

Query: 281 KRYKARLIAKGYSQKYGIDYEETFAPVARMTSIRSLLAVAAAKQWPLLQMDVKNAFLNRT 340
           +RYKARL+AKGYSQ+YGIDYEETFAPVARMTS+RSLLAVAAAKQWPLLQMDVKNAFLN T
Sbjct: 885 ERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAVAAAKQWPLLQMDVKNAFLNGT 944

Query: 341 LSEEV 346
           LSEEV
Sbjct: 945 LSEEV 949

[Close]

BLAST of Cmc11g0289591 vs. NCBI nr
Match: KAA0037745.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 562.0 bits (1447), Expect = 3.6e-156
Identity = 270/305 (88.52%), Postives = 285/305 (93.44%), Query Frame = 0


Query: 41  TINRLPSSVLQNISSFERLHGTPPNYSNLKVFGCACFVLLHPHEHTKLEPRARLYCFLGY 100
           TINRLPSSVLQNIS FERL+GTPPNYSNLKVFGCACFVLL PHEHTKLEPRARL CFLGY
Sbjct: 645 TINRLPSSVLQNISPFERLYGTPPNYSNLKVFGCACFVLLQPHEHTKLEPRARLCCFLGY 704

Query: 101 GTEHKGFRCWDPLSNRLRISRHVTFWEHIMFSHLSSFHSSFSSPQPLFTDTSVELFPLSK 160
           GTEHKGFRCWDPLSNRLRISRHVTFWEH MFS LSSFH+SFSSPQ  FTDTS++LFPLS+
Sbjct: 705 GTEHKGFRCWDPLSNRLRISRHVTFWEHTMFSRLSSFHASFSSPQSFFTDTSIDLFPLSE 764

Query: 161 STLHIELTQSAPTSANSNQSSVSDDGPEPTSDTPPRRSTRVREPPIHLQDYHCFSTIVSL 220
           ST   EL QSAPTSA S+QSS+SD  P+P  D PPRRSTRVREPPIHLQDYHCFSTIVSL
Sbjct: 765 STPGNELAQSAPTSATSDQSSISDGNPDPPPDIPPRRSTRVREPPIHLQDYHCFSTIVSL 824

Query: 221 VEPTSYQEASTDPLWQKAMNDELQALDKTYTWDYVDLPPGKRPIGCKWIYKIKTHSDDTI 280
           +EPTSYQEASTDPLWQKAMNDELQAL+K +TWDYVDLPPGKRPIGCKWIYKIKTHSD TI
Sbjct: 825 IEPTSYQEASTDPLWQKAMNDELQALEKMHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTI 884

Query: 281 KRYKARLIAKGYSQKYGIDYEETFAPVARMTSIRSLLAVAAAKQWPLLQMDVKNAFLNRT 340
           +RYKARL+AKGYSQ+YGIDYEETFAPVARMTS+RSLLAVAAAKQWPLLQMDVKNAFLN T
Sbjct: 885 ERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAVAAAKQWPLLQMDVKNAFLNGT 944

Query: 341 LSEEV 346
           LSEEV
Sbjct: 945 LSEEV 949

[Close]

BLAST of Cmc11g0289591 vs. NCBI nr
Match: TYK26360.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 562.0 bits (1447), Expect = 3.6e-156
Identity = 270/305 (88.52%), Postives = 285/305 (93.44%), Query Frame = 0


Query: 41  TINRLPSSVLQNISSFERLHGTPPNYSNLKVFGCACFVLLHPHEHTKLEPRARLYCFLGY 100
           TINRLPSSVLQNIS FERL+GTPPNYSNLKVFGCACFVLL PHEHTKLEPRARL CFLGY
Sbjct: 645 TINRLPSSVLQNISPFERLYGTPPNYSNLKVFGCACFVLLQPHEHTKLEPRARLCCFLGY 704

Query: 101 GTEHKGFRCWDPLSNRLRISRHVTFWEHIMFSHLSSFHSSFSSPQPLFTDTSVELFPLSK 160
           GTEHKGFRCWDPLSNRLRISRHVTFWEH MFS LSSFH+SFSSPQ  FTDTS++LFPLS+
Sbjct: 705 GTEHKGFRCWDPLSNRLRISRHVTFWEHTMFSRLSSFHASFSSPQSFFTDTSIDLFPLSE 764

Query: 161 STLHIELTQSAPTSANSNQSSVSDDGPEPTSDTPPRRSTRVREPPIHLQDYHCFSTIVSL 220
           ST   EL QSAPTSA S+QSS+SD  P+P  D PPRRSTRVREPPIHLQDYHCFSTIVSL
Sbjct: 765 STPGNELAQSAPTSATSDQSSISDGNPDPPPDIPPRRSTRVREPPIHLQDYHCFSTIVSL 824

Query: 221 VEPTSYQEASTDPLWQKAMNDELQALDKTYTWDYVDLPPGKRPIGCKWIYKIKTHSDDTI 280
           +EPTSYQEASTDPLWQKAMNDELQAL+K +TWDYVDLPPGKRPIGCKWIYKIKTHSD TI
Sbjct: 825 IEPTSYQEASTDPLWQKAMNDELQALEKMHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTI 884

Query: 281 KRYKARLIAKGYSQKYGIDYEETFAPVARMTSIRSLLAVAAAKQWPLLQMDVKNAFLNRT 340
           +RYKARL+AKGYSQ+YGIDYEETFAPVARMTS+RSLLAVAAAKQWPLLQMDVKNAFLN T
Sbjct: 885 ERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAVAAAKQWPLLQMDVKNAFLNGT 944

Query: 341 LSEEV 346
           LSEEV
Sbjct: 945 LSEEV 949

[Close]

BLAST of Cmc11g0289591 vs. NCBI nr
Match: KAA0041601.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] >KAA0065379.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] >TYK12000.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 562.0 bits (1447), Expect = 3.6e-156
Identity = 270/305 (88.52%), Postives = 285/305 (93.44%), Query Frame = 0


Query: 41  TINRLPSSVLQNISSFERLHGTPPNYSNLKVFGCACFVLLHPHEHTKLEPRARLYCFLGY 100
           TINRLPSSVLQNIS FERL+GTPPNYSNLKVFGCACFVLL PHEHTKLEPRARL CFLGY
Sbjct: 645 TINRLPSSVLQNISPFERLYGTPPNYSNLKVFGCACFVLLQPHEHTKLEPRARLCCFLGY 704

Query: 101 GTEHKGFRCWDPLSNRLRISRHVTFWEHIMFSHLSSFHSSFSSPQPLFTDTSVELFPLSK 160
           GTEHKGFRCWDPLSNRLRISRHVTFWEH MFS LSSFH+SFSSPQ  FTDTS++LFPLS+
Sbjct: 705 GTEHKGFRCWDPLSNRLRISRHVTFWEHTMFSRLSSFHASFSSPQSFFTDTSIDLFPLSE 764

Query: 161 STLHIELTQSAPTSANSNQSSVSDDGPEPTSDTPPRRSTRVREPPIHLQDYHCFSTIVSL 220
           ST   EL QSAPTSA S+QSS+SD  P+P  D PPRRSTRVREPPIHLQDYHCFSTIVSL
Sbjct: 765 STPGNELAQSAPTSATSDQSSISDGNPDPPPDIPPRRSTRVREPPIHLQDYHCFSTIVSL 824

Query: 221 VEPTSYQEASTDPLWQKAMNDELQALDKTYTWDYVDLPPGKRPIGCKWIYKIKTHSDDTI 280
           +EPTSYQEASTDPLWQKAMNDELQAL+K +TWDYVDLPPGKRPIGCKWIYKIKTHSD TI
Sbjct: 825 IEPTSYQEASTDPLWQKAMNDELQALEKMHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTI 884

Query: 281 KRYKARLIAKGYSQKYGIDYEETFAPVARMTSIRSLLAVAAAKQWPLLQMDVKNAFLNRT 340
           +RYKARL+AKGYSQ+YGIDYEETFAPVARMTS+RSLLAVAAAKQWPLLQMDVKNAFLN T
Sbjct: 885 ERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAVAAAKQWPLLQMDVKNAFLNGT 944

Query: 341 LSEEV 346
           LSEEV
Sbjct: 945 LSEEV 949

[Close]

BLAST of Cmc11g0289591 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 1.0e-44
Identity = 139/448 (31.03%), Postives = 191/448 (42.63%), Query Frame = 0


Query: 29   GVKQLLHQSIPST------------INRLPSSVLQNISSFERLHGTPPNYSNLKVFGCAC 88
            G+  L H S+P T            INRLP+ +LQ  S F++L G PPNY  LKVFGCAC
Sbjct: 615  GLTLLSHASVPKTYWPYAFSVAVYLINRLPTPLLQLQSPFQKLFGQPPNYEKLKVFGCAC 674

Query: 89   FVLLHPHEHTKLEPRARLYCFLGYGTEHKGFRCWDPLSNRLRISRHVTFWEHIM-FS--- 148
            +  L P+   KLE +++   F+GY      + C    + RL  SRHV F E    FS   
Sbjct: 675  YPWLRPYNRHKLEDKSKQCAFMGYSLTQSAYLCLHIPTGRLYTSRHVQFDERCFPFSTTN 734

Query: 149  --------------------------------------HLSSFHSSFSSPQPL-FTDTSV 208
                                                  HL +     SSP PL  T  S 
Sbjct: 735  FGVSTSQEQRSDSAPNWPSHTTLPTTPLVLPAPPCLGPHLDTSPRPPSSPSPLCTTQVSS 794

Query: 209  ELFPLSKSTLHIELTQSAPT------------SANSNQSSVSDDGPEPTSDTP------- 268
               P S  +       +AP+            + NSN +S   + P P S +P       
Sbjct: 795  SNLPSSSISSPSSSEPTAPSHNGPQPTAQPHQTQNSNSNSPILNNPNPNSPSPNSPNQNS 854

Query: 269  ------------PRRSTRVREP-----------------------------PIHL----- 328
                        P  ST + EP                             P++      
Sbjct: 855  PLPQSPISSPHIPTPSTSISEPNSPSSSSTSTPPLPPVLPAPPIIQVNAQAPVNTHSMAT 914

Query: 329  ----------QDYHCFSTIVSLVEPTSYQEASTDPLWQKAMNDELQALDKTYTWDYVDLP 346
                      Q Y   +++ +  EP +  +A  D  W++AM  E+ A    +TWD V  P
Sbjct: 915  RAKDGIRKPNQKYSYATSLAANSEPRTAIQAMKDDRWRQAMGSEINAQIGNHTWDLVPPP 974

[Close]

BLAST of Cmc11g0289591 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 2.2e-44
Identity = 143/444 (32.21%), Postives = 195/444 (43.92%), Query Frame = 0


Query: 29   GVKQLLHQSIPST------------INRLPSSVLQNISSFERLHGTPPNYSNLKVFGCAC 88
            G+  L H SIP T            INRLP+ +LQ  S F++L GT PNY  L+VFGCAC
Sbjct: 636  GLTLLSHASIPKTYWPYAFAVAVYLINRLPTPLLQLESPFQKLFGTSPNYDKLRVFGCAC 695

Query: 89   FVLLHPHEHTKLEPRARLYCFLGYGTEHKGFRCWDPLSNRLRISRHVTFWEH-------- 148
            +  L P+   KL+ ++R   FLGY      + C    ++RL ISRHV F E+        
Sbjct: 696  YPWLRPYNQHKLDDKSRQCVFLGYSLTQSAYLCLHLQTSRLYISRHVRFDENCFPFSNYL 755

Query: 149  --------------------------------------------------------IMFS 208
                                                                    +  S
Sbjct: 756  ATLSPVQEQRRESSCVWSPHTTLPTRTPVLPAPSCSDPHHAATPPSSPSAPFRNSQVSSS 815

Query: 209  HL-SSFHSSF-SSPQPLF------------TDTSVELFPLSKSTLH-------IELTQSA 268
            +L SSF SSF SSP+P              T T  +      ++ +        +L QS 
Sbjct: 816  NLDSSFSSSFPSSPEPTAPRQNGPQPTTQPTQTQTQTHSSQNTSQNNPTNESPSQLAQSL 875

Query: 269  PTSANSNQSSVSDDGPEPTSDTPPRRSTRVREPPIHLQ-----------DYHC------- 328
             T A S+ SS S      +S T P   + +  PP  L            + H        
Sbjct: 876  STPAQSSSSSPSPTTSASSSSTSPTPPSILIHPPPPLAQIVNNNNQAPLNTHSMGTRAKA 935

Query: 329  --------FSTIVSLV---EPTSYQEASTDPLWQKAMNDELQALDKTYTWDYVDLPPGKR 346
                    +S  VSL    EP +  +A  D  W+ AM  E+ A    +TWD V  PP   
Sbjct: 936  GIIKPNPKYSLAVSLAAESEPRTAIQALKDERWRNAMGSEINAQIGNHTWDLVPPPPSHV 995

[Close]

BLAST of Cmc11g0289591 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 3.4e-40
Identity = 110/312 (35.26%), Postives = 161/312 (51.60%), Query Frame = 0


Query: 65  NYSNLKVFGCACFVLLHPHEHTKLEPRARLYCFLGYGTEHKGFRCWDPLSNRLRISRHVT 124
           +YS+LKVFGC  F  +   + TKL+ ++    F+GYG E  G+R WDP+  ++  SR V 
Sbjct: 644 SYSHLKVFGCRAFAHVPKEQRTKLDDKSIPCIFIGYGDEEFGYRLWDPVKKKVIRSRDVV 703

Query: 125 FWEHIMFSHLSSFHSSFSSPQPLFTDTSVELFPLSKSTLHIELTQSAPTSANSNQSSVSD 184
           F E           S   +   +       + P   + + I  T + PTSA S    VS+
Sbjct: 704 FRE-----------SEVRTAADMSEKVKNGIIP---NFVTIPSTSNNPTSAESTTDEVSE 763

Query: 185 DGPEP------------------------TSDTPPRRSTRVREPPIHLQDYHCFSTIVSL 244
            G +P                            P RRS R   P +  + Y   ST   L
Sbjct: 764 QGEQPGEVIEQGEQLDEGVEEVEHPTQGEEQHQPLRRSER---PRVESRRYP--STEYVL 823

Query: 245 V----EPTSYQEASTDP---LWQKAMNDELQALDKTYTWDYVDLPPGKRPIGCKWIYKIK 304
           +    EP S +E  + P      KAM +E+++L K  T+  V+LP GKRP+ CKW++K+K
Sbjct: 824 ISDDREPESLKEVLSHPEKNQLMKAMQEEMESLQKNGTYKLVELPKGKRPLKCKWVFKLK 883

Query: 305 THSDDTIKRYKARLIAKGYSQKYGIDYEETFAPVARMTSIRSLLAVAAAKQWPLLQMDVK 346
              D  + RYKARL+ KG+ QK GID++E F+PV +MTSIR++L++AA+    + Q+DVK
Sbjct: 884 KDGDCKLVRYKARLVVKGFEQKKGIDFDEIFSPVVKMTSIRTILSLAASLDLEVEQLDVK 936

[Close]

BLAST of Cmc11g0289591 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 103.6 bits (257), Expect = 4.6e-21
Identity = 65/204 (31.86%), Postives = 103/204 (50.49%), Query Frame = 0


Query: 164  HIELTQSAPTSANSNQSSVSDDGPEPTSDTPP---------RRSTRVREPP--------- 223
            H+  ++ +     S +S  ++   E   D P          RRS R++  P         
Sbjct: 815  HLNESKGSGNPNESRESETAEHLKEIGIDNPTKNDGIEIINRRSERLKTKPQISYNEEDN 874

Query: 224  ----IHLQDYHCFSTIVSLVEPTSYQEASTDPLWQKAMNDELQALDKTYTWDYVDLPPGK 283
                + L  +  F+ + +  +   Y++  +   W++A+N EL A     TW     P  K
Sbjct: 875  SLNKVVLNAHTIFNDVPNSFDEIQYRDDKSS--WEEAINTELNAHKINNTWTITKRPENK 934

Query: 284  RPIGCKWIYKIKTHSDDTIKRYKARLIAKGYSQKYGIDYEETFAPVARMTSIRSLLAVAA 343
              +  +W++ +K +      RYKARL+A+G++QKY IDYEETFAPVAR++S R +L++  
Sbjct: 935  NIVDSRWVFSVKYNELGNPIRYKARLVARGFTQKYQIDYEETFAPVARISSFRFILSLVI 994

Query: 344  AKQWPLLQMDVKNAFLNRTLSEEV 346
                 + QMDVK AFLN TL EE+
Sbjct: 995  QYNLKVHQMDVKTAFLNGTLKEEI 1016

[Close]

BLAST of Cmc11g0289591 vs. ExPASy Swiss-Prot
Match: P92520 (Uncharacterized mitochondrial protein AtMg00820 OS=Arabidopsis thaliana OX=3702 GN=AtMg00820 PE=4 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 3.9e-20
Identity = 48/99 (48.48%), Postives = 65/99 (65.66%), Query Frame = 0


Query: 222 EPTSYQEASTDPLWQKAMNDELQALDKTYTWDYVDLPPGKRPIGCKWIYKIKTHSDDTIK 281
           EP S   A  DP W +AM +EL AL +  TW  V  P  +  +GCKW++K K HSD T+ 
Sbjct: 27  EPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLD 86

Query: 282 RYKARLIAKGYSQKYGIDYEETFAPVARMTSIRSLLAVA 321
           R KARL+AKG+ Q+ GI + ET++PV R  +IR++L VA
Sbjct: 87  RLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVA 125

[Close]

BLAST of Cmc11g0289591 vs. ExPASy TrEMBL
Match: A0A5D3BI36 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold180G00360 PE=4 SV=1)

HSP 1 Score: 563.5 bits (1451), Expect = 5.9e-157
Identity = 269/305 (88.20%), Postives = 285/305 (93.44%), Query Frame = 0


Query: 41  TINRLPSSVLQNISSFERLHGTPPNYSNLKVFGCACFVLLHPHEHTKLEPRARLYCFLGY 100
           +INRLPSSVLQNIS FE+L+GTPPNYSNLK FGCACFVLLHPHEHTKLEPRARL CFLGY
Sbjct: 486 SINRLPSSVLQNISPFEKLYGTPPNYSNLKTFGCACFVLLHPHEHTKLEPRARLCCFLGY 545

Query: 101 GTEHKGFRCWDPLSNRLRISRHVTFWEHIMFSHLSSFHSSFSSPQPLFTDTSVELFPLSK 160
           GTEHKGF CWDPLSNRLRISRHVTFWEH MFS LSSFH+SFSSPQP FTDTS++LFP S+
Sbjct: 546 GTEHKGFHCWDPLSNRLRISRHVTFWEHTMFSRLSSFHTSFSSPQPFFTDTSIDLFPPSE 605

Query: 161 STLHIELTQSAPTSANSNQSSVSDDGPEPTSDTPPRRSTRVREPPIHLQDYHCFSTIVSL 220
           S L  EL QSAPTSA S+QSS+ DD PEPT DTPP RSTRVREPPIHLQDYHCFSTI+SL
Sbjct: 606 SPLGNELAQSAPTSAISDQSSIPDDSPEPTPDTPPSRSTRVREPPIHLQDYHCFSTIISL 665

Query: 221 VEPTSYQEASTDPLWQKAMNDELQALDKTYTWDYVDLPPGKRPIGCKWIYKIKTHSDDTI 280
           VEPTSYQEASTDPLWQKAMNDELQAL+KT+TWDYVDLPPGKRPIGCKWIYKIKTHSD TI
Sbjct: 666 VEPTSYQEASTDPLWQKAMNDELQALEKTHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTI 725

Query: 281 KRYKARLIAKGYSQKYGIDYEETFAPVARMTSIRSLLAVAAAKQWPLLQMDVKNAFLNRT 340
           +RYKARL+AKGYSQ+YGIDYEETFAPVARMTS+RSLLAVAAAKQWPLLQMDVKN FLN T
Sbjct: 726 ERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAVAAAKQWPLLQMDVKNVFLNGT 785

Query: 341 LSEEV 346
           LSEEV
Sbjct: 786 LSEEV 790

[Close]

BLAST of Cmc11g0289591 vs. ExPASy TrEMBL
Match: A0A5A7VIT8 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1017G00050 PE=4 SV=1)

HSP 1 Score: 562.0 bits (1447), Expect = 1.7e-156
Identity = 270/305 (88.52%), Postives = 285/305 (93.44%), Query Frame = 0


Query: 41  TINRLPSSVLQNISSFERLHGTPPNYSNLKVFGCACFVLLHPHEHTKLEPRARLYCFLGY 100
           TINRLPSSVLQNIS FERL+GTPPNYSNLKVFGCACFVLL PHEHTKLEPRARL CFLGY
Sbjct: 645 TINRLPSSVLQNISPFERLYGTPPNYSNLKVFGCACFVLLQPHEHTKLEPRARLCCFLGY 704

Query: 101 GTEHKGFRCWDPLSNRLRISRHVTFWEHIMFSHLSSFHSSFSSPQPLFTDTSVELFPLSK 160
           GTEHKGFRCWDPLSNRLRISRHVTFWEH MFS LSSFH+SFSSPQ  FTDTS++LFPLS+
Sbjct: 705 GTEHKGFRCWDPLSNRLRISRHVTFWEHTMFSRLSSFHASFSSPQSFFTDTSIDLFPLSE 764

Query: 161 STLHIELTQSAPTSANSNQSSVSDDGPEPTSDTPPRRSTRVREPPIHLQDYHCFSTIVSL 220
           ST   EL QSAPTSA S+QSS+SD  P+P  D PPRRSTRVREPPIHLQDYHCFSTIVSL
Sbjct: 765 STPGNELAQSAPTSATSDQSSISDGNPDPPPDIPPRRSTRVREPPIHLQDYHCFSTIVSL 824

Query: 221 VEPTSYQEASTDPLWQKAMNDELQALDKTYTWDYVDLPPGKRPIGCKWIYKIKTHSDDTI 280
           +EPTSYQEASTDPLWQKAMNDELQAL+K +TWDYVDLPPGKRPIGCKWIYKIKTHSD TI
Sbjct: 825 IEPTSYQEASTDPLWQKAMNDELQALEKMHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTI 884

Query: 281 KRYKARLIAKGYSQKYGIDYEETFAPVARMTSIRSLLAVAAAKQWPLLQMDVKNAFLNRT 340
           +RYKARL+AKGYSQ+YGIDYEETFAPVARMTS+RSLLAVAAAKQWPLLQMDVKNAFLN T
Sbjct: 885 ERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAVAAAKQWPLLQMDVKNAFLNGT 944

Query: 341 LSEEV 346
           LSEEV
Sbjct: 945 LSEEV 949

[Close]

BLAST of Cmc11g0289591 vs. ExPASy TrEMBL
Match: A0A5D3D7V8 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold242G00480 PE=4 SV=1)

HSP 1 Score: 562.0 bits (1447), Expect = 1.7e-156
Identity = 270/305 (88.52%), Postives = 285/305 (93.44%), Query Frame = 0


Query: 41  TINRLPSSVLQNISSFERLHGTPPNYSNLKVFGCACFVLLHPHEHTKLEPRARLYCFLGY 100
           TINRLPSSVLQNIS FERL+GTPPNYSNLKVFGCACFVLL PHEHTKLEPRARL CFLGY
Sbjct: 645 TINRLPSSVLQNISPFERLYGTPPNYSNLKVFGCACFVLLQPHEHTKLEPRARLCCFLGY 704

Query: 101 GTEHKGFRCWDPLSNRLRISRHVTFWEHIMFSHLSSFHSSFSSPQPLFTDTSVELFPLSK 160
           GTEHKGFRCWDPLSNRLRISRHVTFWEH MFS LSSFH+SFSSPQ  FTDTS++LFPLS+
Sbjct: 705 GTEHKGFRCWDPLSNRLRISRHVTFWEHTMFSRLSSFHASFSSPQSFFTDTSIDLFPLSE 764

Query: 161 STLHIELTQSAPTSANSNQSSVSDDGPEPTSDTPPRRSTRVREPPIHLQDYHCFSTIVSL 220
           ST   EL QSAPTSA S+QSS+SD  P+P  D PPRRSTRVREPPIHLQDYHCFSTIVSL
Sbjct: 765 STPGNELAQSAPTSATSDQSSISDGNPDPPPDIPPRRSTRVREPPIHLQDYHCFSTIVSL 824

Query: 221 VEPTSYQEASTDPLWQKAMNDELQALDKTYTWDYVDLPPGKRPIGCKWIYKIKTHSDDTI 280
           +EPTSYQEASTDPLWQKAMNDELQAL+K +TWDYVDLPPGKRPIGCKWIYKIKTHSD TI
Sbjct: 825 IEPTSYQEASTDPLWQKAMNDELQALEKMHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTI 884

Query: 281 KRYKARLIAKGYSQKYGIDYEETFAPVARMTSIRSLLAVAAAKQWPLLQMDVKNAFLNRT 340
           +RYKARL+AKGYSQ+YGIDYEETFAPVARMTS+RSLLAVAAAKQWPLLQMDVKNAFLN T
Sbjct: 885 ERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAVAAAKQWPLLQMDVKNAFLNGT 944

Query: 341 LSEEV 346
           LSEEV
Sbjct: 945 LSEEV 949

[Close]

BLAST of Cmc11g0289591 vs. ExPASy TrEMBL
Match: A0A5A7T8F2 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold141G00410 PE=4 SV=1)

HSP 1 Score: 562.0 bits (1447), Expect = 1.7e-156
Identity = 270/305 (88.52%), Postives = 285/305 (93.44%), Query Frame = 0


Query: 41  TINRLPSSVLQNISSFERLHGTPPNYSNLKVFGCACFVLLHPHEHTKLEPRARLYCFLGY 100
           TINRLPSSVLQNIS FERL+GTPPNYSNLKVFGCACFVLL PHEHTKLEPRARL CFLGY
Sbjct: 645 TINRLPSSVLQNISPFERLYGTPPNYSNLKVFGCACFVLLQPHEHTKLEPRARLCCFLGY 704

Query: 101 GTEHKGFRCWDPLSNRLRISRHVTFWEHIMFSHLSSFHSSFSSPQPLFTDTSVELFPLSK 160
           GTEHKGFRCWDPLSNRLRISRHVTFWEH MFS LSSFH+SFSSPQ  FTDTS++LFPLS+
Sbjct: 705 GTEHKGFRCWDPLSNRLRISRHVTFWEHTMFSRLSSFHASFSSPQSFFTDTSIDLFPLSE 764

Query: 161 STLHIELTQSAPTSANSNQSSVSDDGPEPTSDTPPRRSTRVREPPIHLQDYHCFSTIVSL 220
           ST   EL QSAPTSA S+QSS+SD  P+P  D PPRRSTRVREPPIHLQDYHCFSTIVSL
Sbjct: 765 STPGNELAQSAPTSATSDQSSISDGNPDPPPDIPPRRSTRVREPPIHLQDYHCFSTIVSL 824

Query: 221 VEPTSYQEASTDPLWQKAMNDELQALDKTYTWDYVDLPPGKRPIGCKWIYKIKTHSDDTI 280
           +EPTSYQEASTDPLWQKAMNDELQAL+K +TWDYVDLPPGKRPIGCKWIYKIKTHSD TI
Sbjct: 825 IEPTSYQEASTDPLWQKAMNDELQALEKMHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTI 884

Query: 281 KRYKARLIAKGYSQKYGIDYEETFAPVARMTSIRSLLAVAAAKQWPLLQMDVKNAFLNRT 340
           +RYKARL+AKGYSQ+YGIDYEETFAPVARMTS+RSLLAVAAAKQWPLLQMDVKNAFLN T
Sbjct: 885 ERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAVAAAKQWPLLQMDVKNAFLNGT 944

Query: 341 LSEEV 346
           LSEEV
Sbjct: 945 LSEEV 949

[Close]

BLAST of Cmc11g0289591 vs. ExPASy TrEMBL
Match: A0A5D3C0D7 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold68G00020 PE=4 SV=1)

HSP 1 Score: 562.0 bits (1447), Expect = 1.7e-156
Identity = 270/305 (88.52%), Postives = 285/305 (93.44%), Query Frame = 0


Query: 41  TINRLPSSVLQNISSFERLHGTPPNYSNLKVFGCACFVLLHPHEHTKLEPRARLYCFLGY 100
           TINRLPSSVLQNIS FERL+GTPPNYSNLKVFGCACFVLL PHEHTKLEPRARL CFLGY
Sbjct: 645 TINRLPSSVLQNISPFERLYGTPPNYSNLKVFGCACFVLLQPHEHTKLEPRARLCCFLGY 704

Query: 101 GTEHKGFRCWDPLSNRLRISRHVTFWEHIMFSHLSSFHSSFSSPQPLFTDTSVELFPLSK 160
           GTEHKGFRCWDPLSNRLRISRHVTFWEH MFS LSSFH+SFSSPQ  FTDTS++LFPLS+
Sbjct: 705 GTEHKGFRCWDPLSNRLRISRHVTFWEHTMFSRLSSFHASFSSPQSFFTDTSIDLFPLSE 764

Query: 161 STLHIELTQSAPTSANSNQSSVSDDGPEPTSDTPPRRSTRVREPPIHLQDYHCFSTIVSL 220
           ST   EL QSAPTSA S+QSS+SD  P+P  D PPRRSTRVREPPIHLQDYHCFSTIVSL
Sbjct: 765 STPGNELAQSAPTSATSDQSSISDGNPDPPPDIPPRRSTRVREPPIHLQDYHCFSTIVSL 824

Query: 221 VEPTSYQEASTDPLWQKAMNDELQALDKTYTWDYVDLPPGKRPIGCKWIYKIKTHSDDTI 280
           +EPTSYQEASTDPLWQKAMNDELQAL+K +TWDYVDLPPGKRPIGCKWIYKIKTHSD TI
Sbjct: 825 IEPTSYQEASTDPLWQKAMNDELQALEKMHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTI 884

Query: 281 KRYKARLIAKGYSQKYGIDYEETFAPVARMTSIRSLLAVAAAKQWPLLQMDVKNAFLNRT 340
           +RYKARL+AKGYSQ+YGIDYEETFAPVARMTS+RSLLAVAAAKQWPLLQMDVKNAFLN T
Sbjct: 885 ERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAVAAAKQWPLLQMDVKNAFLNGT 944

Query: 341 LSEEV 346
           LSEEV
Sbjct: 945 LSEEV 949

[Close]

BLAST of Cmc11g0289591 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 160.6 bits (405), Expect = 2.2e-39
Identity = 86/206 (41.75%), Postives = 126/206 (61.17%), Query Frame = 0


Query: 171 APTSANS----NQSSVSDDGPEPTSDTPPRRSTRVREPPIHLQDYHCFST---------- 230
           A TS++S      +++ +D PEP+  T  RR+ +    P +LQDY+C S           
Sbjct: 7   ASTSSSSIDIMPSANIQNDVPEPSVHTSHRRTRK----PAYLQDYYCHSVASLTIHDISQ 66

Query: 231 -----------------IVSLVEPTSYQEASTDPLWQKAMNDELQALDKTYTWDYVDLPP 290
                            I    EP++Y EA    +W  AM+DE+ A++ T+TW+   LPP
Sbjct: 67  FLSYEKVSPLYHSFLVCIAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPP 126

Query: 291 GKRPIGCKWIYKIKTHSDDTIKRYKARLIAKGYSQKYGIDYEETFAPVARMTSIRSLLAV 346
            K+PIGCKW+YKIK +SD TI+RYKARL+AKGY+Q+ GID+ ETF+PV ++TS++ +LA+
Sbjct: 127 NKKPIGCKWVYKIKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAI 186

[Close]

BLAST of Cmc11g0289591 vs. TAIR 10
Match: ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )

HSP 1 Score: 100.5 bits (249), Expect = 2.7e-21
Identity = 48/99 (48.48%), Postives = 65/99 (65.66%), Query Frame = 0


Query: 222 EPTSYQEASTDPLWQKAMNDELQALDKTYTWDYVDLPPGKRPIGCKWIYKIKTHSDDTIK 281
           EP S   A  DP W +AM +EL AL +  TW  V  P  +  +GCKW++K K HSD T+ 
Sbjct: 27  EPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLD 86

Query: 282 RYKARLIAKGYSQKYGIDYEETFAPVARMTSIRSLLAVA 321
           R KARL+AKG+ Q+ GI + ET++PV R  +IR++L VA
Sbjct: 87  RLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVA 125

The following BLAST results are available for this feature:

BLAST of Cmc11g0289591 vs. NCBI nr


Match Name	E-value	Identity	Description
TYJ98155.1	1.2e-156	88.20	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
TYK19656.1	3.6e-156	88.52	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
KAA0037745.1	3.6e-156	88.52	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
TYK26360.1	3.6e-156	88.52	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
KAA0041601.1	3.6e-156	88.52	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]

BLAST of Cmc11g0289591 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZT94	1.0e-44	31.03	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
Q94HW2	2.2e-44	32.21	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
P10978	3.4e-40	35.26	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P04146	4.6e-21	31.86	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
P92520	3.9e-20	48.48	Uncharacterized mitochondrial protein AtMg00820 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Cmc11g0289591 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BI36	5.9e-157	88.20	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5A7VIT8	1.7e-156	88.52	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5D3D7V8	1.7e-156	88.52	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5A7T8F2	1.7e-156	88.52	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5D3C0D7	1.7e-156	88.52	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]

BLAST of Cmc11g0289591 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	2.2e-39	41.75	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00820.1	2.7e-21	48.48	Reverse transcriptase (RNA-dependent DNA polymerase)	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 251..345 e-value: 6.1E-30 score: 104.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 169..194
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 169..202
None	No IPR available	PANTHER	PTHR45895	FAMILY NOT NAMED	coord: 43..344
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 249..344

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc11g0289591.1	Cmc11g0289591.1	mRNA