Cmc11g0289581 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc11g0289581
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Location	CMiso1.1chr11: 4178835 .. 4179419 (-)
RNA-Seq Expression	Cmc11g0289581
Synteny	Cmc11g0289581

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTACTCCTAGAACCATTCATTTTACTGCTGTGTTACGTTTTCTCCGCTATATTAAGGGAACCTTGGGACATGGACTTCAGTTTTCCTCTCAATCATCTCTCATATTATCTGGCTACTCTGATGCAGATTGGGCTGGGGATCCCACTGATCGACCCTCTACAACAGGTTACTGTTTTTACTTAGGTGATTCTCTCATTTCTTGGCGTAGTAAGAAACAAAATGTTGTCTCTCGTTCCAGCACTAAATCAGAATATCGTGCTCTTGCTGATGCTACTGCTGAACTCCTATGGCTTTGCTGGCTTCTTGCTGACATGGGTGTTCCCCAACAGGGACCCACTCTCCTCTATTGTGATAATTGTAGTGTCATCCAAATTGCCCACAATGATGTTTTTCATGAACGTACAAAGCACATCGAAAATGACTGTCACTTCATTCGTCATCATCTCTTGAGCAATACTCTCCTCTTACAACCTGTCTCCACCACTGAGCAACCAGCAGATATCTTCACCAAAACTTTACCATCTACCCGCTTCAATCAATTACTTACCAAACTCAAGCTGACAGATACTCTACCACCTTGA

mRNA sequence

ATGGCTACTCCTAGAACCATTCATTTTACTGCTGTGTTACGTTTTCTCCGCTATATTAAGGGAACCTTGGGACATGGACTTCAGTTTTCCTCTCAATCATCTCTCATATTATCTGGCTACTCTGATGCAGATTGGGCTGGGGATCCCACTGATCGACCCTCTACAACAGGTTACTGTTTTTACTTAGGTGATTCTCTCATTTCTTGGCGTAGTAAGAAACAAAATGTTGTCTCTCGTTCCAGCACTAAATCAGAATATCGTGCTCTTGCTGATGCTACTGCTGAACTCCTATGGCTTTGCTGGCTTCTTGCTGACATGGGTGTTCCCCAACAGGGACCCACTCTCCTCTATTGTGATAATTGTAGTGTCATCCAAATTGCCCACAATGATGTTTTTCATGAACGTACAAAGCACATCGAAAATGACTGTCACTTCATTCGTCATCATCTCTTGAGCAATACTCTCCTCTTACAACCTGTCTCCACCACTGAGCAACCAGCAGATATCTTCACCAAAACTTTACCATCTACCCGCTTCAATCAATTACTTACCAAACTCAAGCTGACAGATACTCTACCACCTTGA

Coding sequence (CDS)

ATGGCTACTCCTAGAACCATTCATTTTACTGCTGTGTTACGTTTTCTCCGCTATATTAAGGGAACCTTGGGACATGGACTTCAGTTTTCCTCTCAATCATCTCTCATATTATCTGGCTACTCTGATGCAGATTGGGCTGGGGATCCCACTGATCGACCCTCTACAACAGGTTACTGTTTTTACTTAGGTGATTCTCTCATTTCTTGGCGTAGTAAGAAACAAAATGTTGTCTCTCGTTCCAGCACTAAATCAGAATATCGTGCTCTTGCTGATGCTACTGCTGAACTCCTATGGCTTTGCTGGCTTCTTGCTGACATGGGTGTTCCCCAACAGGGACCCACTCTCCTCTATTGTGATAATTGTAGTGTCATCCAAATTGCCCACAATGATGTTTTTCATGAACGTACAAAGCACATCGAAAATGACTGTCACTTCATTCGTCATCATCTCTTGAGCAATACTCTCCTCTTACAACCTGTCTCCACCACTGAGCAACCAGCAGATATCTTCACCAAAACTTTACCATCTACCCGCTTCAATCAATTACTTACCAAACTCAAGCTGACAGATACTCTACCACCTTGA

Protein sequence

MATPRTIHFTAVLRFLRYIKGTLGHGLQFSSQSSLILSGYSDADWAGDPTDRPSTTGYCFYLGDSLISWRSKKQNVVSRSSTKSEYRALADATAELLWLCWLLADMGVPQQGPTLLYCDNCSVIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKTLPSTRFNQLLTKLKLTDTLPP

Homology

[Close]

BLAST of Cmc11g0289581 vs. NCBI nr
Match: XP_016903443.1 (PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Cucumis melo])

HSP 1 Score: 368.2 bits (944), Expect = 4.3e-98
Identity = 181/194 (93.30%), Postives = 183/194 (94.33%), Query Frame = 0


Query: 1   MATPRTIHFTAVLRFLRYIKGTLGHGLQFSSQSSLILSGYSDADWAGDPTDRPSTTGYCF 60
           MA PRTIHFTAVLR LRYIKGTLGHGLQFSSQSSL+LSGYSDADWAGDPTDR STTGYCF
Sbjct: 228 MAVPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCF 287

Query: 61  YLGDSLISWRSKKQNVVSRSSTKSEYRALADATAELLWLCWLLADMGVPQQGPTLLYCDN 120
           YLGDSLISWRSKKQ+VVSRSSTKSEYRALAD TAELLWL WLLADMGVPQQGPTLLYCDN
Sbjct: 288 YLGDSLISWRSKKQSVVSRSSTKSEYRALADTTAELLWLRWLLADMGVPQQGPTLLYCDN 347

Query: 121 CSVIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKTLPSTRFN 180
            S IQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTK LP TRFN
Sbjct: 348 RSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKALPFTRFN 407

Query: 181 QLLTKLKLTDTLPP 195
           QL TKLKLT TLPP
Sbjct: 408 QLRTKLKLTATLPP 421

[Close]

BLAST of Cmc11g0289581 vs. NCBI nr
Match: TYK30390.1 (putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 367.5 bits (942), Expect = 7.3e-98
Identity = 180/194 (92.78%), Postives = 184/194 (94.85%), Query Frame = 0


Query: 1   MATPRTIHFTAVLRFLRYIKGTLGHGLQFSSQSSLILSGYSDADWAGDPTDRPSTTGYCF 60
           MA PRTIHFTAVLR LRYIKGTLGHGLQFSSQSSL+LSGYSDADWAGDPTDR STTGYCF
Sbjct: 208 MAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCF 267

Query: 61  YLGDSLISWRSKKQNVVSRSSTKSEYRALADATAELLWLCWLLADMGVPQQGPTLLYCDN 120
           YLGDSLISWRSKKQ+VVSRSST+SEYRALAD TAELLWL WLLADMGVPQQGPTLLYCDN
Sbjct: 268 YLGDSLISWRSKKQSVVSRSSTESEYRALADTTAELLWLHWLLADMGVPQQGPTLLYCDN 327

Query: 121 CSVIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKTLPSTRFN 180
            S IQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLQPVSTT+QPADIFTK LPSTRFN
Sbjct: 328 RSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLQPVSTTKQPADIFTKALPSTRFN 387

Query: 181 QLLTKLKLTDTLPP 195
           QL TKLKLT TLPP
Sbjct: 388 QLRTKLKLTATLPP 401

[Close]

BLAST of Cmc11g0289581 vs. NCBI nr
Match: KAA0057482.1 (putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 367.5 bits (942), Expect = 7.3e-98
Identity = 180/194 (92.78%), Postives = 183/194 (94.33%), Query Frame = 0


Query: 1   MATPRTIHFTAVLRFLRYIKGTLGHGLQFSSQSSLILSGYSDADWAGDPTDRPSTTGYCF 60
           MA PRTIHFTAVLR LRYIKGTLGHGLQFSSQSSL+LSGYSDADW GDPTDR STTGYCF
Sbjct: 582 MAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGYSDADWVGDPTDRRSTTGYCF 641

Query: 61  YLGDSLISWRSKKQNVVSRSSTKSEYRALADATAELLWLCWLLADMGVPQQGPTLLYCDN 120
           YLGDSLISWRSKKQ+VVSRSST+SEYRALAD TAELLWL WLLADMGVPQQGPTLLYCDN
Sbjct: 642 YLGDSLISWRSKKQSVVSRSSTESEYRALADTTAELLWLRWLLADMGVPQQGPTLLYCDN 701

Query: 121 CSVIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKTLPSTRFN 180
            S IQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTK LPSTRFN
Sbjct: 702 RSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKALPSTRFN 761

Query: 181 QLLTKLKLTDTLPP 195
           QL TKLKLT TLPP
Sbjct: 762 QLRTKLKLTATLPP 775

[Close]

BLAST of Cmc11g0289581 vs. NCBI nr
Match: TYK26219.1 (putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 366.7 bits (940), Expect = 1.2e-97
Identity = 180/194 (92.78%), Postives = 183/194 (94.33%), Query Frame = 0


Query: 1   MATPRTIHFTAVLRFLRYIKGTLGHGLQFSSQSSLILSGYSDADWAGDPTDRPSTTGYCF 60
           MA PRTIHFTAVLR LRYIKGTLGHGLQFSSQSSL+LSGYSDADWAGDPTDR STTGYCF
Sbjct: 1   MAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCF 60

Query: 61  YLGDSLISWRSKKQNVVSRSSTKSEYRALADATAELLWLCWLLADMGVPQQGPTLLYCDN 120
           YLGDSLISWRSKKQ+VVSRSST+SEYRALAD TAELLWL WLLADMGVPQQGPTLLYCDN
Sbjct: 61  YLGDSLISWRSKKQSVVSRSSTESEYRALADTTAELLWLRWLLADMGVPQQGPTLLYCDN 120

Query: 121 CSVIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKTLPSTRFN 180
            S IQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLQPV TTEQPADIFTK LPSTRFN
Sbjct: 121 RSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLQPVFTTEQPADIFTKALPSTRFN 180

Query: 181 QLLTKLKLTDTLPP 195
           QL TKLKLT TLPP
Sbjct: 181 QLRTKLKLTATLPP 194

[Close]

BLAST of Cmc11g0289581 vs. NCBI nr
Match: TYK23446.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 365.9 bits (938), Expect = 2.1e-97
Identity = 180/194 (92.78%), Postives = 182/194 (93.81%), Query Frame = 0


Query: 1    MATPRTIHFTAVLRFLRYIKGTLGHGLQFSSQSSLILSGYSDADWAGDPTDRPSTTGYCF 60
            M  PRTIHFTAVLR LRYIKGTLGHGLQFSSQSSL+LSGYSDADWAGDPTDR STTGYCF
Sbjct: 1165 MDVPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCF 1224

Query: 61   YLGDSLISWRSKKQNVVSRSSTKSEYRALADATAELLWLCWLLADMGVPQQGPTLLYCDN 120
            YLGDSLISWRSKKQ+VVSRSSTKSEYRALAD TAELLWL WLLADMGVPQQGPTLLYCDN
Sbjct: 1225 YLGDSLISWRSKKQSVVSRSSTKSEYRALADTTAELLWLRWLLADMGVPQQGPTLLYCDN 1284

Query: 121  CSVIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKTLPSTRFN 180
             S IQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTK LP TRFN
Sbjct: 1285 RSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKALPFTRFN 1344

Query: 181  QLLTKLKLTDTLPP 195
            QL TKLKLT TLPP
Sbjct: 1345 QLRTKLKLTATLPP 1358

[Close]

BLAST of Cmc11g0289581 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 1.1e-40
Identity = 87/193 (45.08%), Postives = 114/193 (59.07%), Query Frame = 0


Query: 1    MATPRTIHFTAVLRFLRYIKGTLGHGLQFSSQSSLILSGYSDADWAGDPTDRPSTTGYCF 60
            M  P   H  A+ R LRY+ GT  HG+     ++L L  YSDADWAGD  D  ST GY  
Sbjct: 1273 MHMPTEEHLQALKRILRYLAGTPNHGIFLKKGNTLSLHAYSDADWAGDKDDYVSTNGYIV 1332

Query: 61   YLGDSLISWRSKKQNVVSRSSTKSEYRALADATAELLWLCWLLADMGVPQQGPTLLYCDN 120
            YLG   ISW SKKQ  V RSST++EYR++A+ ++E+ W+C LL ++G+    P ++YCDN
Sbjct: 1333 YLGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSEMQWICSLLTELGIRLTRPPVIYCDN 1392

Query: 121  CSVIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKTLPSTRFN 180
                 +  N VFH R KHI  D HFIR+ + S  L +  VST +Q AD  TK L  T F 
Sbjct: 1393 VGATYLCANPVFHSRMKHIAIDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPLSRTAFQ 1452

Query: 181  QLLTKLKLTDTLP 194
               +K+ +T   P
Sbjct: 1453 NFASKIGVTRVPP 1465

[Close]

BLAST of Cmc11g0289581 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 1.2e-39
Identity = 86/193 (44.56%), Postives = 112/193 (58.03%), Query Frame = 0


Query: 1    MATPRTIHFTAVLRFLRYIKGTLGHGLQFSSQSSLILSGYSDADWAGDPTDRPSTTGYCF 60
            M  P   H+ A+ R LRY+ GT  HG+     ++L L  YSDADWAGD  D  ST GY  
Sbjct: 1256 MHMPTDDHWNALKRVLRYLAGTPDHGIFLKKGNTLSLHAYSDADWAGDTDDYVSTNGYIV 1315

Query: 61   YLGDSLISWRSKKQNVVSRSSTKSEYRALADATAELLWLCWLLADMGVPQQGPTLLYCDN 120
            YLG   ISW SKKQ  V RSST++EYR++A+ ++EL W+C LL ++G+    P ++YCDN
Sbjct: 1316 YLGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSELQWICSLLTELGIQLSHPPVIYCDN 1375

Query: 121  CSVIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKTLPSTRFN 180
                 +  N VFH R KHI  D HFIR+ + S  L +  VST +Q AD  TK L    F 
Sbjct: 1376 VGATYLCANPVFHSRMKHIALDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPLSRVAFQ 1435

Query: 181  QLLTKLKLTDTLP 194
                K+ +    P
Sbjct: 1436 NFSRKIGVIKVPP 1448

[Close]

BLAST of Cmc11g0289581 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 144.4 bits (363), Expect = 1.3e-33
Identity = 80/178 (44.94%), Postives = 108/178 (60.67%), Query Frame = 0


Query: 14   RFLRYIKGTLGHGLQFSSQSSL--ILSGYSDADWAGDPTDRPSTTGYCFYLGD-SLISWR 73
            R LRY+KGT+   L F    +    + GY D+DWAG   DR STTGY F + D +LI W 
Sbjct: 1223 RVLRYLKGTIDMKLIFKKNLAFENKIIGYVDSDWAGSEIDRKSTTGYLFKMFDFNLICWN 1282

Query: 74   SKKQNVVSRSSTKSEYRALADATAELLWLCWLLADMGVPQQGPTLLYCDNCSVIQIAHND 133
            +K+QN V+ SST++EY AL +A  E LWL +LL  + +  + P  +Y DN   I IA+N 
Sbjct: 1283 TKRQNSVAASSTEAEYMALFEAVREALWLKFLLTSINIKLENPIKIYEDNQGCISIANNP 1342

Query: 134  VFHERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKTLPSTRFNQLLTKLKL 189
              H+R KHI+   HF R  + +N + L+ + T  Q ADIFTK LP+ RF +L  KL L
Sbjct: 1343 SCHKRAKHIDIKYHFAREQVQNNVICLEYIPTENQLADIFTKPLPAARFVELRDKLGL 1400

[Close]

BLAST of Cmc11g0289581 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 8.0e-31
Identity = 73/179 (40.78%), Postives = 108/179 (60.34%), Query Frame = 0


Query: 1    MATPRTIHFTAVLRFLRYIKGTLGHGLQFSSQSSLILSGYSDADWAGDPTDRPSTTGYCF 60
            +  P   H+ AV   LRY++GT G  L F   S  IL GY+DAD AGD  +R S+TGY F
Sbjct: 1140 LENPGKEHWEAVKWILRYLRGTTGDCLCFGG-SDPILKGYTDADMAGDIDNRKSSTGYLF 1199

Query: 61   YLGDSLISWRSKKQNVVSRSSTKSEYRALADATAELLWLCWLLADMGVPQQGPTLLYCDN 120
                  ISW+SK Q  V+ S+T++EY A  +   E++WL   L ++G+ Q+   ++YCD+
Sbjct: 1200 TFSGGAISWQSKLQKCVALSTTEAEYIAATETGKEMIWLKRFLQELGLHQK-EYVVYCDS 1259

Query: 121  CSVIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKTLPSTRF 180
             S I ++ N ++H RTKHI+   H+IR  +   +L +  +ST E PAD+ TK +P  +F
Sbjct: 1260 QSAIDLSKNSMYHARTKHIDVRYHWIREMVDDESLKVLKISTNENPADMLTKVVPRNKF 1316

[Close]

BLAST of Cmc11g0289581 vs. ExPASy Swiss-Prot
Match: P0CV72 (Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 PE=2 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 9.7e-21
Identity = 49/96 (51.04%), Postives = 64/96 (66.67%), Query Frame = 0


Query: 4   PRTIHFTAVLRFLRYIKGTLGHGLQFSSQSSLILSGYSDADWAGDPTDRPSTTGYCFYLG 63
           P   H+ A+ R LRY++ T  +GL+F+   +  L GYSDADWAGD   R ST+GY F L 
Sbjct: 38  PCPTHWQALKRVLRYLQSTQTYGLEFTRAGTAKLVGYSDADWAGDVESRRSTSGYLFKLN 97

Query: 64  DSLISWRSKKQNVVSRSSTKSEYRALADATAELLWL 100
              +SWRSKKQ  V+ SST+ EY AL++AT E +WL
Sbjct: 98  GGCVSWRSKKQRTVALSSTEDEYMALSEATQEAVWL 133

[Close]

BLAST of Cmc11g0289581 vs. ExPASy TrEMBL
Match: A0A1S4E5D2 (uncharacterized mitochondrial protein AtMg00810-like OS=Cucumis melo OX=3656 GN=LOC107992200 PE=4 SV=1)

HSP 1 Score: 368.2 bits (944), Expect = 2.1e-98
Identity = 181/194 (93.30%), Postives = 183/194 (94.33%), Query Frame = 0


Query: 1   MATPRTIHFTAVLRFLRYIKGTLGHGLQFSSQSSLILSGYSDADWAGDPTDRPSTTGYCF 60
           MA PRTIHFTAVLR LRYIKGTLGHGLQFSSQSSL+LSGYSDADWAGDPTDR STTGYCF
Sbjct: 228 MAVPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCF 287

Query: 61  YLGDSLISWRSKKQNVVSRSSTKSEYRALADATAELLWLCWLLADMGVPQQGPTLLYCDN 120
           YLGDSLISWRSKKQ+VVSRSSTKSEYRALAD TAELLWL WLLADMGVPQQGPTLLYCDN
Sbjct: 288 YLGDSLISWRSKKQSVVSRSSTKSEYRALADTTAELLWLRWLLADMGVPQQGPTLLYCDN 347

Query: 121 CSVIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKTLPSTRFN 180
            S IQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTK LP TRFN
Sbjct: 348 RSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKALPFTRFN 407

Query: 181 QLLTKLKLTDTLPP 195
           QL TKLKLT TLPP
Sbjct: 408 QLRTKLKLTATLPP 421

[Close]

BLAST of Cmc11g0289581 vs. ExPASy TrEMBL
Match: A0A5A7UNP5 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold280G003640 PE=4 SV=1)

HSP 1 Score: 367.5 bits (942), Expect = 3.5e-98
Identity = 180/194 (92.78%), Postives = 183/194 (94.33%), Query Frame = 0


Query: 1   MATPRTIHFTAVLRFLRYIKGTLGHGLQFSSQSSLILSGYSDADWAGDPTDRPSTTGYCF 60
           MA PRTIHFTAVLR LRYIKGTLGHGLQFSSQSSL+LSGYSDADW GDPTDR STTGYCF
Sbjct: 582 MAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGYSDADWVGDPTDRRSTTGYCF 641

Query: 61  YLGDSLISWRSKKQNVVSRSSTKSEYRALADATAELLWLCWLLADMGVPQQGPTLLYCDN 120
           YLGDSLISWRSKKQ+VVSRSST+SEYRALAD TAELLWL WLLADMGVPQQGPTLLYCDN
Sbjct: 642 YLGDSLISWRSKKQSVVSRSSTESEYRALADTTAELLWLRWLLADMGVPQQGPTLLYCDN 701

Query: 121 CSVIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKTLPSTRFN 180
            S IQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTK LPSTRFN
Sbjct: 702 RSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKALPSTRFN 761

Query: 181 QLLTKLKLTDTLPP 195
           QL TKLKLT TLPP
Sbjct: 762 QLRTKLKLTATLPP 775

[Close]

BLAST of Cmc11g0289581 vs. ExPASy TrEMBL
Match: A0A5D3E4B0 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2254G00020 PE=4 SV=1)

HSP 1 Score: 367.5 bits (942), Expect = 3.5e-98
Identity = 180/194 (92.78%), Postives = 184/194 (94.85%), Query Frame = 0


Query: 1   MATPRTIHFTAVLRFLRYIKGTLGHGLQFSSQSSLILSGYSDADWAGDPTDRPSTTGYCF 60
           MA PRTIHFTAVLR LRYIKGTLGHGLQFSSQSSL+LSGYSDADWAGDPTDR STTGYCF
Sbjct: 208 MAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCF 267

Query: 61  YLGDSLISWRSKKQNVVSRSSTKSEYRALADATAELLWLCWLLADMGVPQQGPTLLYCDN 120
           YLGDSLISWRSKKQ+VVSRSST+SEYRALAD TAELLWL WLLADMGVPQQGPTLLYCDN
Sbjct: 268 YLGDSLISWRSKKQSVVSRSSTESEYRALADTTAELLWLHWLLADMGVPQQGPTLLYCDN 327

Query: 121 CSVIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKTLPSTRFN 180
            S IQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLQPVSTT+QPADIFTK LPSTRFN
Sbjct: 328 RSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLQPVSTTKQPADIFTKALPSTRFN 387

Query: 181 QLLTKLKLTDTLPP 195
           QL TKLKLT TLPP
Sbjct: 388 QLRTKLKLTATLPP 401

[Close]

BLAST of Cmc11g0289581 vs. ExPASy TrEMBL
Match: A0A5D3DS09 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold111G001520 PE=4 SV=1)

HSP 1 Score: 366.7 bits (940), Expect = 6.0e-98
Identity = 180/194 (92.78%), Postives = 183/194 (94.33%), Query Frame = 0


Query: 1   MATPRTIHFTAVLRFLRYIKGTLGHGLQFSSQSSLILSGYSDADWAGDPTDRPSTTGYCF 60
           MA PRTIHFTAVLR LRYIKGTLGHGLQFSSQSSL+LSGYSDADWAGDPTDR STTGYCF
Sbjct: 1   MAAPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCF 60

Query: 61  YLGDSLISWRSKKQNVVSRSSTKSEYRALADATAELLWLCWLLADMGVPQQGPTLLYCDN 120
           YLGDSLISWRSKKQ+VVSRSST+SEYRALAD TAELLWL WLLADMGVPQQGPTLLYCDN
Sbjct: 61  YLGDSLISWRSKKQSVVSRSSTESEYRALADTTAELLWLRWLLADMGVPQQGPTLLYCDN 120

Query: 121 CSVIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKTLPSTRFN 180
            S IQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLQPV TTEQPADIFTK LPSTRFN
Sbjct: 121 RSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLQPVFTTEQPADIFTKALPSTRFN 180

Query: 181 QLLTKLKLTDTLPP 195
           QL TKLKLT TLPP
Sbjct: 181 QLRTKLKLTATLPP 194

[Close]

BLAST of Cmc11g0289581 vs. ExPASy TrEMBL
Match: A0A5A7TG30 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold262G00660 PE=4 SV=1)

HSP 1 Score: 365.9 bits (938), Expect = 1.0e-97
Identity = 180/194 (92.78%), Postives = 182/194 (93.81%), Query Frame = 0


Query: 1    MATPRTIHFTAVLRFLRYIKGTLGHGLQFSSQSSLILSGYSDADWAGDPTDRPSTTGYCF 60
            M  PRTIHFTAVLR LRYIKGTLGHGLQFSSQSSL+LSGYSDADWAGDPTDR STTGYCF
Sbjct: 1123 MDVPRTIHFTAVLRILRYIKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCF 1182

Query: 61   YLGDSLISWRSKKQNVVSRSSTKSEYRALADATAELLWLCWLLADMGVPQQGPTLLYCDN 120
            YLGDSLISWRSKKQ+VVSRSSTKSEYRALAD TAELLWL WLLADMGVPQQGPTLLYCDN
Sbjct: 1183 YLGDSLISWRSKKQSVVSRSSTKSEYRALADTTAELLWLRWLLADMGVPQQGPTLLYCDN 1242

Query: 121  CSVIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKTLPSTRFN 180
             S IQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTK LP TRFN
Sbjct: 1243 RSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKALPFTRFN 1302

Query: 181  QLLTKLKLTDTLPP 195
            QL TKLKLT TLPP
Sbjct: 1303 QLRTKLKLTATLPP 1316

[Close]

BLAST of Cmc11g0289581 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 165.2 bits (417), Expect = 5.1e-41
Identity = 79/144 (54.86%), Postives = 102/144 (70.83%), Query Frame = 0


Query: 4   PRTIHFTAVLRFLRYIKGTLGHGLQFSSQSSLILSGYSDADWAGDPTDRPSTTGYCFYLG 63
           PR  H  AV++ L YIKGT+G GL +SSQ+ + L  +SDA +      R ST GYC +LG
Sbjct: 409 PRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLG 468

Query: 64  DSLISWRSKKQNVVSRSSTKSEYRALADATAELLWLCWLLADMGVPQQGPTLLYCDNCSV 123
            SLISW+SKKQ VVS+SS ++EYRAL+ AT E++WL     ++ +P   PTLL+CDN + 
Sbjct: 469 TSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAA 528

Query: 124 IQIAHNDVFHERTKHIENDCHFIR 148
           I IA N VFHERTKHIE+DCH +R
Sbjct: 529 IHIATNAVFHERTKHIESDCHSVR 552

[Close]

BLAST of Cmc11g0289581 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 101.3 bits (251), Expect = 9.0e-22
Identity = 49/98 (50.00%), Postives = 64/98 (65.31%), Query Frame = 0


Query: 1   MATPRTIHFTAVLRFLRYIKGTLGHGLQFSSQSSLILSGYSDADWAGDPTDRPSTTGYCF 60
           M  P    F  + R LRY+KGT+ HGL     S L +  + D+DWAG  + R STTG+C 
Sbjct: 128 MHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCT 187

Query: 61  YLGDSLISWRSKKQNVVSRSSTKSEYRALADATAELLW 99
           +LG ++ISW +K+Q  VSRSST++EYRALA   AEL W
Sbjct: 188 FLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

[Close]

BLAST of Cmc11g0289581 vs. TAIR 10
Match: ATMG00240.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 58.5 bits (140), Expect = 6.7e-09
Identity = 26/55 (47.27%), Postives = 35/55 (63.64%), Query Frame = 0


Query: 5  RTIHFTAVLRFLRYIKGTLGHGLQFSSQSSLILSGYSDADWAGDPTDRPSTTGYC 60
          RT    AV + L Y+KGT+G GL +S+ S L L  ++D+DWA  P  R S TG+C
Sbjct: 25 RTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAFADSDWASCPDTRRSVTGFC 79

The following BLAST results are available for this feature:

BLAST of Cmc11g0289581 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016903443.1	4.3e-98	93.30	PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Cucumis melo]	[more]
TYK30390.1	7.3e-98	92.78	putative mitochondrial protein [Cucumis melo var. makuwa]	[more]
KAA0057482.1	7.3e-98	92.78	putative mitochondrial protein [Cucumis melo var. makuwa]	[more]
TYK26219.1	1.2e-97	92.78	putative mitochondrial protein [Cucumis melo var. makuwa]	[more]
TYK23446.1	2.1e-97	92.78	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]

BLAST of Cmc11g0289581 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94HW2	1.1e-40	45.08	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
Q9ZT94	1.2e-39	44.56	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
P04146	1.3e-33	44.94	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
P10978	8.0e-31	40.78	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P0CV72	9.7e-21	51.04	Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 P...	[more]

BLAST of Cmc11g0289581 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4E5D2	2.1e-98	93.30	uncharacterized mitochondrial protein AtMg00810-like OS=Cucumis melo OX=3656 GN=...	[more]
A0A5A7UNP5	3.5e-98	92.78	Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]
A0A5D3E4B0	3.5e-98	92.78	Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A5D3DS09	6.0e-98	92.78	Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A5A7TG30	1.0e-97	92.78	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]

BLAST of Cmc11g0289581 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	5.1e-41	54.86	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00810.1	9.0e-22	50.00	DNA/RNA polymerases superfamily protein	[more]
ATMG00240.1	6.7e-09	47.27	Gag-Pol-related retrotransposon family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR11439	GAG-POL-RELATED RETROTRANSPOSON	coord: 66..186
None	No IPR available	PANTHER	PTHR11439:SF343	SUBFAMILY NOT NAMED	coord: 66..186
None	No IPR available	CDD	cd09272	RNase_HI_RT_Ty1	coord: 39..176 e-value: 1.16264E-81 score: 236.981
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 17..144

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc11g0289581.1	Cmc11g0289581.1	mRNA