Homology
BLAST of Cmc11g0289351 vs. NCBI nr
Match:
KAA0054988.1 (hypothetical protein E6C27_scaffold43052G001360 [Cucumis melo var. makuwa])
HSP 1 Score: 248.1 bits (632), Expect = 6.1e-62
Identity = 136/204 (66.67%), Postives = 142/204 (69.61%), Query Frame = 0
Query: 1 MNDELNSLYKNDTWKLVEKPHGKSMIPCKWVFKKKMIGDLNDKAKFKKRLVAKGFKQKEG 60
MNDELNSLYKNDTW+LVEKPH KS+IPCKWVFKKKMI DLNDK K K RLVAKGFKQKEG
Sbjct: 576 MNDELNSLYKNDTWELVEKPHKKSIIPCKWVFKKKMIDDLNDKVKIKARLVAKGFKQKEG 635
Query: 61 VDYNESFSP-----------------------LDVTTAFLYGSLEEEIFMEQPKDFEVKG 120
VDYNE FSP LDVTTAFL+GSLEEEIFMEQPK FEVKG
Sbjct: 636 VDYNEIFSPVVKHTCIRILLTIVACENLKLEQLDVTTAFLHGSLEEEIFMEQPKGFEVKG 695
Query: 121 KKELVCKLKRSLYGLKQSPRCWYKRFDDYISLIRFIRSLYDPCVYYKKLTEGYYIYLLLY 180
KKELVCKL RSLYDPCVYYKKLTEG YIY+LLY
Sbjct: 696 KKELVCKLN---------------------------RSLYDPCVYYKKLTEGDYIYILLY 752
Query: 181 VDNMLLAGRNSIKLKEIKAQLSVE 182
VD+MLLAGR+ KLKEIKAQLS E
Sbjct: 756 VDDMLLAGRDPTKLKEIKAQLSAE 752
BLAST of Cmc11g0289351 vs. NCBI nr
Match:
KAA0047818.1 (retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])
HSP 1 Score: 248.1 bits (632), Expect = 6.1e-62
Identity = 125/203 (61.58%), Postives = 149/203 (73.40%), Query Frame = 0
Query: 1 MNDELNSLYKNDTWKLVEKPHGKSMIPCKWVFKKKMIGDLNDKAKFKKRLVAKGFKQKEG 60
+ +E+NSL+KN+T + +P K +IP KWV+KKK +G+ N+K KFK RLVAKGFKQKEG
Sbjct: 113 IKNEINSLHKNETLEFTGRPLNKGIIPSKWVYKKKFLGEKNEKVKFKVRLVAKGFKQKEG 172
Query: 61 VDYNESFSP----------------------LDVTTAFLYGSLEEEIFMEQPKDFEVKGK 120
DY E FSP +DVT AFL+GSLEE+++MEQPK FE KGK
Sbjct: 173 ADYTEIFSPVVSTSIRVLLTIVTCEDLKLEQMDVTIAFLHGSLEEDLYMEQPKGFEAKGK 232
Query: 121 KELVCKLKRSLYGLKQSPRCWYKRFDDYISLIRFIRSLYDPCVYYKKLTEGYYIYLLLYV 180
+LVCKLK+SLYGLKQSPRCW KRFDD+I+ I F+RSLYDPCVYYKKLT G IYLLLYV
Sbjct: 233 IDLVCKLKKSLYGLKQSPRCWNKRFDDFINKIGFMRSLYDPCVYYKKLTNGSLIYLLLYV 292
Query: 181 DNMLLAGRNSIKLKEIKAQLSVE 182
D+MLLAG+N KL EIK QL E
Sbjct: 293 DDMLLAGKNLTKLNEIKEQLKNE 315
BLAST of Cmc11g0289351 vs. NCBI nr
Match:
TYK02789.1 (retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])
HSP 1 Score: 231.1 bits (588), Expect = 7.7e-57
Identity = 121/201 (60.20%), Postives = 143/201 (71.14%), Query Frame = 0
Query: 6 NSLYKND--TWKLVEKPHGKSMIPCKWVFKKKMIGDLNDKAKFKKRLVAKGFKQKEGVDY 65
+ LY N TW+L ++P K +IP K V+KKK +G+ N+K KFK RLVAKGFKQKEGV Y
Sbjct: 117 DELYMNSETTWELTDRPLNKGVIPWKRVYKKKFLGEKNEKVKFKTRLVAKGFKQKEGVGY 176
Query: 66 NESFSP-----------------------LDVTTAFLYGSLEEEIFMEQPKDFEVKGKKE 125
+ FSP +DVTT FL+GSLEE+++MEQ K FE KGK +
Sbjct: 177 TKFFSPVVKHTSIRVLLSIVACEDLELEQMDVTTTFLHGSLEEDLYMEQHKGFEAKGKTD 236
Query: 126 LVCKLKRSLYGLKQSPRCWYKRFDDYISLIRFIRSLYDPCVYYKKLTEGYYIYLLLYVDN 182
LVCKLK+SLYGLKQSPRCWYKRFD +I+ I F+RSLYDP VYYKKLT+G IYLLLYVDN
Sbjct: 237 LVCKLKKSLYGLKQSPRCWYKRFDVFINKIGFMRSLYDPLVYYKKLTDGSLIYLLLYVDN 296
BLAST of Cmc11g0289351 vs. NCBI nr
Match:
BBH00108.1 (transposable element gene [Prunus dulcis])
HSP 1 Score: 215.7 bits (548), Expect = 3.3e-52
Identity = 104/184 (56.52%), Postives = 140/184 (76.09%), Query Frame = 0
Query: 1 MNDELNSLYKNDTWKLVEKPHGKSMIPCKWVFKKKMIGDLNDKAKFKKRLVAKGFKQKEG 60
M++E+ SL+KN+TW+LV+ P GK I CKWV+ KKM D +FK RLVAKG+ QKEG
Sbjct: 299 MDEEMKSLHKNETWELVQLPKGKKAIGCKWVYAKKMESLGKDNVRFKARLVAKGYAQKEG 358
Query: 61 VDYNE---SFSPLDVTTAFLYGSLEEEIFMEQPKDFEVKGKKELVCKLKRSLYGLKQSPR 120
+DYNE + LDV TAFL+G LEEEI+M QP+ F+V GK+ VCKL++SLYGLKQSPR
Sbjct: 359 IDYNEFDLELAQLDVKTAFLHGDLEEEIYMSQPEGFKVAGKENWVCKLQKSLYGLKQSPR 418
Query: 121 CWYKRFDDYISLIRFIRSLYDPCVYYKKLTEGYYIYLLLYVDNMLLAGRNSIKLKEIKAQ 180
WYKRFD ++ ++ RS YD CVY++KL +G +IYLLLYVD+ML+A ++ ++++ +K Q
Sbjct: 419 QWYKRFDRFMIGQKYTRSHYDHCVYFRKLQDGTFIYLLLYVDDMLIACKSKVEIERLKTQ 478
Query: 181 LSVE 182
LS E
Sbjct: 479 LSNE 482
BLAST of Cmc11g0289351 vs. NCBI nr
Match:
BBG99268.1 (transposable element gene [Prunus dulcis])
HSP 1 Score: 215.7 bits (548), Expect = 3.3e-52
Identity = 104/184 (56.52%), Postives = 140/184 (76.09%), Query Frame = 0
Query: 1 MNDELNSLYKNDTWKLVEKPHGKSMIPCKWVFKKKMIGDLNDKAKFKKRLVAKGFKQKEG 60
M++E+ SL+KN+TW+LV+ P GK I CKWV+ KKM D +FK RLVAKG+ QKEG
Sbjct: 828 MDEEMKSLHKNETWELVQLPKGKKAIGCKWVYAKKMESLGKDNVRFKARLVAKGYAQKEG 887
Query: 61 VDYNE---SFSPLDVTTAFLYGSLEEEIFMEQPKDFEVKGKKELVCKLKRSLYGLKQSPR 120
+DYNE + LDV TAFL+G LEEEI+M QP+ F+V GK+ VCKL++SLYGLKQSPR
Sbjct: 888 IDYNEFDLELAQLDVKTAFLHGDLEEEIYMSQPEGFKVAGKENWVCKLQKSLYGLKQSPR 947
Query: 121 CWYKRFDDYISLIRFIRSLYDPCVYYKKLTEGYYIYLLLYVDNMLLAGRNSIKLKEIKAQ 180
WYKRFD ++ ++ RS YD CVY++KL +G +IYLLLYVD+ML+A ++ ++++ +K Q
Sbjct: 948 QWYKRFDRFMIGQKYTRSHYDHCVYFRKLQDGTFIYLLLYVDDMLIACKSKVEIERLKTQ 1007
Query: 181 LSVE 182
LS E
Sbjct: 1008 LSNE 1011
BLAST of Cmc11g0289351 vs. ExPASy Swiss-Prot
Match:
P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)
HSP 1 Score: 193.7 bits (491), Expect = 1.8e-48
Identity = 98/202 (48.51%), Postives = 133/202 (65.84%), Query Frame = 0
Query: 1 MNDELNSLYKNDTWKLVEKPHGKSMIPCKWVFKKKMIGDLNDKAKFKKRLVAKGFKQKEG 60
M +E+ SL KN T+KLVE P GK + CKWVFK K GD ++K RLV KGF+QK+G
Sbjct: 830 MQEEMESLQKNGTYKLVELPKGKRPLKCKWVFKLKKDGDCK-LVRYKARLVVKGFEQKKG 889
Query: 61 VDYNESFSP-----------------------LDVTTAFLYGSLEEEIFMEQPKDFEVKG 120
+D++E FSP LDV TAFL+G LEEEI+MEQP+ FEV G
Sbjct: 890 IDFDEIFSPVVKMTSIRTILSLAASLDLEVEQLDVKTAFLHGDLEEEIYMEQPEGFEVAG 949
Query: 121 KKELVCKLKRSLYGLKQSPRCWYKRFDDYISLIRFIRSLYDPCVYYKKLTEGYYIYLLLY 180
KK +VCKL +SLYGLKQ+PR WY +FD ++ ++++ DPCVY+K+ +E +I LLLY
Sbjct: 950 KKHMVCKLNKSLYGLKQAPRQWYMKFDSFMKSQTYLKTYSDPCVYFKRFSENNFIILLLY 1009
BLAST of Cmc11g0289351 vs. ExPASy Swiss-Prot
Match:
Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)
HSP 1 Score: 132.1 bits (331), Expect = 6.4e-30
Identity = 72/203 (35.47%), Postives = 112/203 (55.17%), Query Frame = 0
Query: 1 MNDELNSLYKNDTWKLV-EKPHGKSMIPCKWVFKKKMIGDLNDKAKFKKRLVAKGFKQKE 60
M E+N+ N TW LV P +++ C+W+F KK D ++K RLVAKG+ Q+
Sbjct: 955 MGSEINAQIGNHTWDLVPPPPPSVTIVGCRWIFTKKFNSD-GSLNRYKARLVAKGYNQRP 1014
Query: 61 GVDYNESFSP-----------------------LDVTTAFLYGSLEEEIFMEQPKDFEVK 120
G+DY E+FSP LDV AFL G+L +E++M QP F K
Sbjct: 1015 GLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDEVYMSQPPGFVDK 1074
Query: 121 GKKELVCKLKRSLYGLKQSPRCWYKRFDDYISLIRFIRSLYDPCVYYKKLTEGYYIYLLL 180
+ + VC+L++++YGLKQ+PR WY Y+ + F+ S+ D ++ + IY+L+
Sbjct: 1075 DRPDYVCRLRKAIYGLKQAPRAWYVELRTYLLTVGFVNSISDTSLFVLQRGRS-IIYMLV 1134
BLAST of Cmc11g0289351 vs. ExPASy Swiss-Prot
Match:
Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)
HSP 1 Score: 128.3 bits (321), Expect = 9.2e-29
Identity = 72/203 (35.47%), Postives = 110/203 (54.19%), Query Frame = 0
Query: 1 MNDELNSLYKNDTWKLVEKPHGK-SMIPCKWVFKKKMIGDLNDKAKFKKRLVAKGFKQKE 60
M E+N+ N TW LV P +++ C+W+F KK D ++K RLVAKG+ Q+
Sbjct: 972 MGSEINAQIGNHTWDLVPPPPSHVTIVGCRWIFTKKYNSD-GSLNRYKARLVAKGYNQRP 1031
Query: 61 GVDYNESFSP-----------------------LDVTTAFLYGSLEEEIFMEQPKDFEVK 120
G+DY E+FSP LDV AFL G+L ++++M QP F K
Sbjct: 1032 GLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDDVYMSQPPGFIDK 1091
Query: 121 GKKELVCKLKRSLYGLKQSPRCWYKRFDDYISLIRFIRSLYDPCVYYKKLTEGYYIYLLL 180
+ VCKL+++LYGLKQ+PR WY +Y+ I F+ S+ D ++ + + +Y+L+
Sbjct: 1092 DRPNYVCKLRKALYGLKQAPRAWYVELRNYLLTIGFVNSVSDTSLFVLQRGKS-IVYMLV 1151
BLAST of Cmc11g0289351 vs. ExPASy Swiss-Prot
Match:
P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)
HSP 1 Score: 126.3 bits (316), Expect = 3.5e-28
Identity = 70/202 (34.65%), Postives = 113/202 (55.94%), Query Frame = 0
Query: 1 MNDELNSLYKNDTWKLVEKPHGKSMIPCKWVFKKKMIGDLNDKAKFKKRLVAKGFKQKEG 60
+N ELN+ N+TW + ++P K+++ +WVF K +L + ++K RLVA+GF QK
Sbjct: 910 INTELNAHKINNTWTITKRPENKNIVDSRWVFSVK-YNELGNPIRYKARLVARGFTQKYQ 969
Query: 61 VDYNESFSP-----------------------LDVTTAFLYGSLEEEIFMEQPKDFEVKG 120
+DY E+F+P +DV TAFL G+L+EEI+M P+ +
Sbjct: 970 IDYEETFAPVARISSFRFILSLVIQYNLKVHQMDVKTAFLNGTLKEEIYMRLPQG--ISC 1029
Query: 121 KKELVCKLKRSLYGLKQSPRCWYKRFDDYISLIRFIRSLYDPCVY-YKKLTEGYYIYLLL 179
+ VCKL +++YGLKQ+ RCW++ F+ + F+ S D C+Y K IY+LL
Sbjct: 1030 NSDNVCKLNKAIYGLKQAARCWFEVFEQALKECEFVNSSVDRCIYILDKGNINENIYVLL 1089
BLAST of Cmc11g0289351 vs. ExPASy Swiss-Prot
Match:
P0C2J7 (Transposon Ty4-H Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY4B-H PE=3 SV=1)
HSP 1 Score: 66.6 bits (161), Expect = 3.3e-10
Identity = 51/171 (29.82%), Postives = 78/171 (45.61%), Query Frame = 0
Query: 25 MIPCKWVFKKKMIGDLNDKAKFKKRLVAKGFKQK---------EGVDYNE---------- 84
++P +F KK G +K R+V +G Q E +++N
Sbjct: 1321 IVPTNTIFTKKRNG------IYKARIVCRGDTQSPDTYSVITTESLNHNHIKIFLMIANN 1380
Query: 85 ---SFSPLDVTTAFLYGSLEEEIFMEQPKDFEVKGKKELVCKLKRSLYGLKQSPRCWYKR 144
LD+ AFLY LEEEI++ P D + V KL ++LYGLKQSP+ W
Sbjct: 1381 RNMFMKTLDINHAFLYAKLEEEIYIPHPHD------RRCVVKLNKALYGLKQSPKEWNDH 1440
Query: 145 FDDYISLIRFIRSLYDPCVYYKKLTEGYYIYLLLYVDNMLLAGRNSIKLKE 174
Y++ I + Y P +Y TE + + +YVD+ ++A N +L E
Sbjct: 1441 LRQYLNGIGLKDNSYTPGLYQ---TEDKNLMIAVYVDDCVIAASNEQRLDE 1476
BLAST of Cmc11g0289351 vs. ExPASy TrEMBL
Match:
A0A5A7TXZ9 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold133G00700 PE=4 SV=1)
HSP 1 Score: 248.1 bits (632), Expect = 2.9e-62
Identity = 125/203 (61.58%), Postives = 149/203 (73.40%), Query Frame = 0
Query: 1 MNDELNSLYKNDTWKLVEKPHGKSMIPCKWVFKKKMIGDLNDKAKFKKRLVAKGFKQKEG 60
+ +E+NSL+KN+T + +P K +IP KWV+KKK +G+ N+K KFK RLVAKGFKQKEG
Sbjct: 113 IKNEINSLHKNETLEFTGRPLNKGIIPSKWVYKKKFLGEKNEKVKFKVRLVAKGFKQKEG 172
Query: 61 VDYNESFSP----------------------LDVTTAFLYGSLEEEIFMEQPKDFEVKGK 120
DY E FSP +DVT AFL+GSLEE+++MEQPK FE KGK
Sbjct: 173 ADYTEIFSPVVSTSIRVLLTIVTCEDLKLEQMDVTIAFLHGSLEEDLYMEQPKGFEAKGK 232
Query: 121 KELVCKLKRSLYGLKQSPRCWYKRFDDYISLIRFIRSLYDPCVYYKKLTEGYYIYLLLYV 180
+LVCKLK+SLYGLKQSPRCW KRFDD+I+ I F+RSLYDPCVYYKKLT G IYLLLYV
Sbjct: 233 IDLVCKLKKSLYGLKQSPRCWNKRFDDFINKIGFMRSLYDPCVYYKKLTNGSLIYLLLYV 292
Query: 181 DNMLLAGRNSIKLKEIKAQLSVE 182
D+MLLAG+N KL EIK QL E
Sbjct: 293 DDMLLAGKNLTKLNEIKEQLKNE 315
BLAST of Cmc11g0289351 vs. ExPASy TrEMBL
Match:
A0A5A7UJ23 (Integrase catalytic domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43052G001360 PE=4 SV=1)
HSP 1 Score: 248.1 bits (632), Expect = 2.9e-62
Identity = 136/204 (66.67%), Postives = 142/204 (69.61%), Query Frame = 0
Query: 1 MNDELNSLYKNDTWKLVEKPHGKSMIPCKWVFKKKMIGDLNDKAKFKKRLVAKGFKQKEG 60
MNDELNSLYKNDTW+LVEKPH KS+IPCKWVFKKKMI DLNDK K K RLVAKGFKQKEG
Sbjct: 576 MNDELNSLYKNDTWELVEKPHKKSIIPCKWVFKKKMIDDLNDKVKIKARLVAKGFKQKEG 635
Query: 61 VDYNESFSP-----------------------LDVTTAFLYGSLEEEIFMEQPKDFEVKG 120
VDYNE FSP LDVTTAFL+GSLEEEIFMEQPK FEVKG
Sbjct: 636 VDYNEIFSPVVKHTCIRILLTIVACENLKLEQLDVTTAFLHGSLEEEIFMEQPKGFEVKG 695
Query: 121 KKELVCKLKRSLYGLKQSPRCWYKRFDDYISLIRFIRSLYDPCVYYKKLTEGYYIYLLLY 180
KKELVCKL RSLYDPCVYYKKLTEG YIY+LLY
Sbjct: 696 KKELVCKLN---------------------------RSLYDPCVYYKKLTEGDYIYILLY 752
Query: 181 VDNMLLAGRNSIKLKEIKAQLSVE 182
VD+MLLAGR+ KLKEIKAQLS E
Sbjct: 756 VDDMLLAGRDPTKLKEIKAQLSAE 752
BLAST of Cmc11g0289351 vs. ExPASy TrEMBL
Match:
A0A5D3BXB7 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold145G00480 PE=4 SV=1)
HSP 1 Score: 231.1 bits (588), Expect = 3.7e-57
Identity = 121/201 (60.20%), Postives = 143/201 (71.14%), Query Frame = 0
Query: 6 NSLYKND--TWKLVEKPHGKSMIPCKWVFKKKMIGDLNDKAKFKKRLVAKGFKQKEGVDY 65
+ LY N TW+L ++P K +IP K V+KKK +G+ N+K KFK RLVAKGFKQKEGV Y
Sbjct: 117 DELYMNSETTWELTDRPLNKGVIPWKRVYKKKFLGEKNEKVKFKTRLVAKGFKQKEGVGY 176
Query: 66 NESFSP-----------------------LDVTTAFLYGSLEEEIFMEQPKDFEVKGKKE 125
+ FSP +DVTT FL+GSLEE+++MEQ K FE KGK +
Sbjct: 177 TKFFSPVVKHTSIRVLLSIVACEDLELEQMDVTTTFLHGSLEEDLYMEQHKGFEAKGKTD 236
Query: 126 LVCKLKRSLYGLKQSPRCWYKRFDDYISLIRFIRSLYDPCVYYKKLTEGYYIYLLLYVDN 182
LVCKLK+SLYGLKQSPRCWYKRFD +I+ I F+RSLYDP VYYKKLT+G IYLLLYVDN
Sbjct: 237 LVCKLKKSLYGLKQSPRCWYKRFDVFINKIGFMRSLYDPLVYYKKLTDGSLIYLLLYVDN 296
BLAST of Cmc11g0289351 vs. ExPASy TrEMBL
Match:
A0A4Y1R569 (Transposable element protein OS=Prunus dulcis OX=3755 GN=Prudu_008898 PE=4 SV=1)
HSP 1 Score: 215.7 bits (548), Expect = 1.6e-52
Identity = 104/184 (56.52%), Postives = 140/184 (76.09%), Query Frame = 0
Query: 1 MNDELNSLYKNDTWKLVEKPHGKSMIPCKWVFKKKMIGDLNDKAKFKKRLVAKGFKQKEG 60
M++E+ SL+KN+TW+LV+ P GK I CKWV+ KKM D +FK RLVAKG+ QKEG
Sbjct: 828 MDEEMKSLHKNETWELVQLPKGKKAIGCKWVYAKKMESLGKDNVRFKARLVAKGYAQKEG 887
Query: 61 VDYNE---SFSPLDVTTAFLYGSLEEEIFMEQPKDFEVKGKKELVCKLKRSLYGLKQSPR 120
+DYNE + LDV TAFL+G LEEEI+M QP+ F+V GK+ VCKL++SLYGLKQSPR
Sbjct: 888 IDYNEFDLELAQLDVKTAFLHGDLEEEIYMSQPEGFKVAGKENWVCKLQKSLYGLKQSPR 947
Query: 121 CWYKRFDDYISLIRFIRSLYDPCVYYKKLTEGYYIYLLLYVDNMLLAGRNSIKLKEIKAQ 180
WYKRFD ++ ++ RS YD CVY++KL +G +IYLLLYVD+ML+A ++ ++++ +K Q
Sbjct: 948 QWYKRFDRFMIGQKYTRSHYDHCVYFRKLQDGTFIYLLLYVDDMLIACKSKVEIERLKTQ 1007
Query: 181 LSVE 182
LS E
Sbjct: 1008 LSNE 1011
BLAST of Cmc11g0289351 vs. ExPASy TrEMBL
Match:
A0A4Y1R8B3 (Transposable element protein OS=Prunus dulcis OX=3755 GN=Prudu_010022 PE=4 SV=1)
HSP 1 Score: 215.7 bits (548), Expect = 1.6e-52
Identity = 104/184 (56.52%), Postives = 140/184 (76.09%), Query Frame = 0
Query: 1 MNDELNSLYKNDTWKLVEKPHGKSMIPCKWVFKKKMIGDLNDKAKFKKRLVAKGFKQKEG 60
M++E+ SL+KN+TW+LV+ P GK I CKWV+ KKM D +FK RLVAKG+ QKEG
Sbjct: 299 MDEEMKSLHKNETWELVQLPKGKKAIGCKWVYAKKMESLGKDNVRFKARLVAKGYAQKEG 358
Query: 61 VDYNE---SFSPLDVTTAFLYGSLEEEIFMEQPKDFEVKGKKELVCKLKRSLYGLKQSPR 120
+DYNE + LDV TAFL+G LEEEI+M QP+ F+V GK+ VCKL++SLYGLKQSPR
Sbjct: 359 IDYNEFDLELAQLDVKTAFLHGDLEEEIYMSQPEGFKVAGKENWVCKLQKSLYGLKQSPR 418
Query: 121 CWYKRFDDYISLIRFIRSLYDPCVYYKKLTEGYYIYLLLYVDNMLLAGRNSIKLKEIKAQ 180
WYKRFD ++ ++ RS YD CVY++KL +G +IYLLLYVD+ML+A ++ ++++ +K Q
Sbjct: 419 QWYKRFDRFMIGQKYTRSHYDHCVYFRKLQDGTFIYLLLYVDDMLIACKSKVEIERLKTQ 478
Query: 181 LSVE 182
LS E
Sbjct: 479 LSNE 482
BLAST of Cmc11g0289351 vs. TAIR 10
Match:
AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )
HSP 1 Score: 122.5 bits (306), Expect = 3.6e-28
Identity = 71/205 (34.63%), Postives = 113/205 (55.12%), Query Frame = 0
Query: 1 MNDELNSLYKNDTWKLVEKPHGKSMIPCKWVFKKKMIGDLNDKAKFKKRLVAKGFKQKEG 60
M+DE+ ++ TW++ P K I CKWV+K K D ++K RLVAKG+ Q+EG
Sbjct: 102 MDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSD-GTIERYKARLVAKGYTQQEG 161
Query: 61 VDYNESFSP-----------------------LDVTTAFLYGSLEEEIFMEQPKDFEVKG 120
+D+ E+FSP LD++ AFL G L+EEI+M+ P + +
Sbjct: 162 IDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQ 221
Query: 121 KKEL----VCKLKRSLYGLKQSPRCWYKRFDDYISLIRFIRSLYDPCVYYKKLTEGYYIY 179
L VC LK+S+YGLKQ+ R W+ +F + F++S D Y+ K+T ++
Sbjct: 222 GDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDH-TYFLKITATLFLC 281
BLAST of Cmc11g0289351 vs. TAIR 10
Match:
ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )
HSP 1 Score: 65.9 bits (159), Expect = 4.0e-11
Identity = 32/70 (45.71%), Postives = 48/70 (68.57%), Query Frame = 0
Query: 1 MNDELNSLYKNDTWKLVEKPHGKSMIPCKWVFKKKMIGDLNDKAKFKKRLVAKGFKQKEG 60
M +EL++L +N TW LV P ++++ CKWVFK K+ D + K RLVAKGF Q+EG
Sbjct: 44 MQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSD-GTLDRLKARLVAKGFHQEEG 103
Query: 61 VDYNESFSPL 71
+ + E++SP+
Sbjct: 104 IYFVETYSPV 112
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAA0054988.1 | 6.1e-62 | 66.67 | hypothetical protein E6C27_scaffold43052G001360 [Cucumis melo var. makuwa] | [more] |
KAA0047818.1 | 6.1e-62 | 61.58 | retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m... | [more] |
TYK02789.1 | 7.7e-57 | 60.20 | retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m... | [more] |
BBH00108.1 | 3.3e-52 | 56.52 | transposable element gene [Prunus dulcis] | [more] |
BBG99268.1 | 3.3e-52 | 56.52 | transposable element gene [Prunus dulcis] | [more] |
Match Name | E-value | Identity | Description | |
P10978 | 1.8e-48 | 48.51 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... | [more] |
Q9ZT94 | 6.4e-30 | 35.47 | Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... | [more] |
Q94HW2 | 9.2e-29 | 35.47 | Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... | [more] |
P04146 | 3.5e-28 | 34.65 | Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3 | [more] |
P0C2J7 | 3.3e-10 | 29.82 | Transposon Ty4-H Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20... | [more] |
Match Name | E-value | Identity | Description | |
A0A5A7TXZ9 | 2.9e-62 | 61.58 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... | [more] |
A0A5A7UJ23 | 2.9e-62 | 66.67 | Integrase catalytic domain-containing protein OS=Cucumis melo var. makuwa OX=119... | [more] |
A0A5D3BXB7 | 3.7e-57 | 60.20 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... | [more] |
A0A4Y1R569 | 1.6e-52 | 56.52 | Transposable element protein OS=Prunus dulcis OX=3755 GN=Prudu_008898 PE=4 SV=1 | [more] |
A0A4Y1R8B3 | 1.6e-52 | 56.52 | Transposable element protein OS=Prunus dulcis OX=3755 GN=Prudu_010022 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
AT4G23160.1 | 3.6e-28 | 34.63 | cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | [more] |
ATMG00820.1 | 4.0e-11 | 45.71 | Reverse transcriptase (RNA-dependent DNA polymerase) | [more] |