Cmc11g0288981 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc11g0288981
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Zinc finger CCHC domain-containing protein 10
Location	CMiso1.1chr11: 3425446 .. 3427580 (-)
RNA-Seq Expression	Cmc11g0288981
Synteny	Cmc11g0288981

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTCTGGAAACCCTTTTCTCACTCTCCCACCCTTTACTATGATTATTTTCAAATTAGAATTTTGAAGCAAATCATACAAACAAACATTGGAGGGACGTTTGACCTAGAACAGATAATGGAAAACTTAGGATTAGGTTTTCATAAATCCTTTCTTTTTCTTTCCTTTTCTACTATTCCACTATTTCCTCGATCCTTCCCTAAATATCACCGTCACCCTCGGCCGTCTTCACAACACCATGGAGGAGGACACTCATCGACCACGCCTTTTGCGGCTGTCGATAGCTCAGCAGCCGTCGAGTTCATGATCCGGCGCTGAAGGTGAAAATTTATTTATTAAATGCCTTTTGTTTCAACTTTCTTCAATTTCCTATTTTCTTATTTAAAAGATCCTAGCGACCCGACCCGAACCAACCAGATTCGGGTTCATATAAAATCCTCCCCTCCTCCATATTTCTCATTCCATTCGAGATTTTCTACGAACTGGATTTTGCTTAATCTTCAAACCCTAAGGAAGGTATGTACCAACTACGATTCCTTTACTTTCGATTCAATTTCAAGCTTTAAGGAGCTGCAAACATTGCCTAATTTTACTCGATCTTTTTGGGATTTTTCCTTTTTCCTTACGGACCAGATCGGTGTTCTATTCCGATTGCGATTTGTTAATAAGAAACGTTAGATTTTTGCTGTGATTATGTTGTTTTAAGCTATACTTTTCTCTGATTTTATTCTAATTCCCTCCCTCCTACTGTAACTATTGGAAACCCTAAATTGCTCCTTCCTCTTTTCTTGTTTTTTTGTGTTCTTTACTTTTTGTACGATTTATCTGCTCGTAATCTAGGGATTTTTCCTTATGATCTTATTCTTCCAATTTATCTTCCACCTGGTTATTTATTTATATTTAGATGGTGAAGTCATAGAATGATTTATAAGAAGGAAACCTGATAGTTCTTGTTTCGTTTTTCTCGTAATGTCTGTTTGCTCTTAACATCGGTAATTCGTCGCGATACTTTTCTTCAGTTTCTGATCGTTCGTCGTGTGTTTGGATTCAGATATTGAAAAAACAAACCATGTCTAGTAAGAAGGAAGAGAAGTCGCAAGCTGCTGCTGAAAGGATTAAGGCTGCGGCTCTTAGTGCTGCAAAAGGTCTTAGTCGTGCTCAGGCCGAACGAGCAGCTGCGGCTGCTGCTCGGAATGTTAATGCTTATGGGCAGAAGGAAGAAGGGCCTAGCAGATGGCAGGAGAAAAGGGAAGCAAAGAGGCAGATGTATTTGATGAGTACTGAAAAGGCAGTAAGATTGGGTGAAAGAAAAGACATTAAGGGCTCTATGTCTAGTGCTGGTGGAGCTGCTGCACAATGCCAGAAATGTTATCAGATGGGACACTGGACCTACGAATGCAAAAATGAACGAGTTTACATATCTCGTCCATCTCGAACTCAACAACTTAAAAATCCAAAGCTGAGGATGAAGATGGAAGTCTCATTGGAGTTGGACAACCCAGATCCTGGTGAGGAGGAGAAGCCCAAGAAGCATTCGAAGAACAAAAGTAAAAGAAAGCATCGGTCCAATGCAAAATCCGATAGCGATAGTGAGGCCTCTGTGTTTGAGACTGATAGTGGGTCCTCATCAGTTACTGAATCTGATGATTCTTCTGAAGAAAGCAGTTCAGATTACAGTTCTTCATCCGAATCAGAGTGCGAAAGGAGTCGAAGAAGGAGAAAGAAGCAGAAGAGGGGGAGAAGAAAGAGGAGGTACAGTTCGTCTTCTGATTCTTCTGATTCAGACTCAAGGTCTGAATCAGAATCTGATTCCGATAATGAACGTAGTAGGAGGAAGAGCCGACGACACAGCAGAAGACGCTAGTTAAGGTGGATCGAGTGAAGCAGATTAGAATTGTCGATAAATCATGGCAATTGTAGTCAGTTTAGAGATTTGTGTTTCATTCAGTTTCTTGTTTGGGGGAAGATCTGAAGTTTGGGGTTTCTTTTTTGAGTTTAGCGACTACTTCCTTTCCTTTGTTCTCATCTTATAGCTCTTATGAATGTATAAATTGTTGTTTATGCTTTACTTCTATAACTGTTATGTTTACATACGTTTGTTCTTGAATAAATTAAGGTTAATTGTTAAAGATTGGTG

mRNA sequence

TCTCTGGAAACCCTTTTCTCACTCTCCCACCCTTTACTATGATTATTTTCAAATTAGAATTTTGAAGCAAATCATACAAACAAACATTGGAGGGACGTTTGACCTAGAACAGATAATGGAAAACTTAGGATTAGGTTTTCATAAATCCTTTCTTTTTCTTTCCTTTTCTACTATTCCACTATTTCCTCGATCCTTCCCTAAATATCACCGTCACCCTCGGCCGTCTTCACAACACCATGGAGGAGGACACTCATCGACCACGCCTTTTGCGGCTGTCGATAGCTCAGCAGCCGTCGAGTTCATGATCCGGCGCTGAAGGTGAAAATTTATTTATTAAATGCCTTTTGTTTCAACTTTCTTCAATTTCCTATTTTCTTATTTAAAAGATCCTAGCGACCCGACCCGAACCAACCAGATTCGGGTTCATATAAAATCCTCCCCTCCTCCATATTTCTCATTCCATTCGAGATTTTCTACGAACTGGATTTTGCTTAATCTTCAAACCCTAAGGAAGATATTGAAAAAACAAACCATGTCTAGTAAGAAGGAAGAGAAGTCGCAAGCTGCTGCTGAAAGGATTAAGGCTGCGGCTCTTAGTGCTGCAAAAGGTCTTAGTCGTGCTCAGGCCGAACGAGCAGCTGCGGCTGCTGCTCGGAATGTTAATGCTTATGGGCAGAAGGAAGAAGGGCCTAGCAGATGGCAGGAGAAAAGGGAAGCAAAGAGGCAGATGTATTTGATGAGTACTGAAAAGGCAGTAAGATTGGGTGAAAGAAAAGACATTAAGGGCTCTATGTCTAGTGCTGGTGGAGCTGCTGCACAATGCCAGAAATGTTATCAGATGGGACACTGGACCTACGAATGCAAAAATGAACGAGTTTACATATCTCGTCCATCTCGAACTCAACAACTTAAAAATCCAAAGCTGAGGATGAAGATGGAAGTCTCATTGGAGTTGGACAACCCAGATCCTGGTGAGGAGGAGAAGCCCAAGAAGCATTCGAAGAACAAAAGTAAAAGAAAGCATCGGTCCAATGCAAAATCCGATAGCGATAGTGAGGCCTCTGTGTTTGAGACTGATAGTGGGTCCTCATCAGTTACTGAATCTGATGATTCTTCTGAAGAAAGCAGTTCAGATTACAGTTCTTCATCCGAATCAGAGTGCGAAAGGAGTCGAAGAAGGAGAAAGAAGCAGAAGAGGGGGAGAAGAAAGAGGAGGTACAGTTCGTCTTCTGATTCTTCTGATTCAGACTCAAGGTCTGAATCAGAATCTGATTCCGATAATGAACGTAGTAGGAGGAAGAGCCGACGACACAGCAGAAGACGCTAGTTAAGGTGGATCGAGTGAAGCAGATTAGAATTGTCGATAAATCATGGCAATTGTAGTCAGTTTAGAGATTTGTGTTTCATTCAGTTTCTTGTTTGGGGGAAGATCTGAAGTTTGGGGTTTCTTTTTTGAGTTTAGCGACTACTTCCTTTCCTTTGTTCTCATCTTATAGCTCTTATGAATGTATAAATTGTTGTTTATGCTTTACTTCTATAACTGTTATGTTTACATACGTTTGTTCTTGAATAAATTAAGGTTAATTGTTAAAGATTGGTG

Coding sequence (CDS)

ATGCCTTTTGTTTCAACTTTCTTCAATTTCCTATTTTCTTATTTAAAAGATCCTAGCGACCCGACCCGAACCAACCAGATTCGGGTTCATATAAAATCCTCCCCTCCTCCATATTTCTCATTCCATTCGAGATTTTCTACGAACTGGATTTTGCTTAATCTTCAAACCCTAAGGAAGATATTGAAAAAACAAACCATGTCTAGTAAGAAGGAAGAGAAGTCGCAAGCTGCTGCTGAAAGGATTAAGGCTGCGGCTCTTAGTGCTGCAAAAGGTCTTAGTCGTGCTCAGGCCGAACGAGCAGCTGCGGCTGCTGCTCGGAATGTTAATGCTTATGGGCAGAAGGAAGAAGGGCCTAGCAGATGGCAGGAGAAAAGGGAAGCAAAGAGGCAGATGTATTTGATGAGTACTGAAAAGGCAGTAAGATTGGGTGAAAGAAAAGACATTAAGGGCTCTATGTCTAGTGCTGGTGGAGCTGCTGCACAATGCCAGAAATGTTATCAGATGGGACACTGGACCTACGAATGCAAAAATGAACGAGTTTACATATCTCGTCCATCTCGAACTCAACAACTTAAAAATCCAAAGCTGAGGATGAAGATGGAAGTCTCATTGGAGTTGGACAACCCAGATCCTGGTGAGGAGGAGAAGCCCAAGAAGCATTCGAAGAACAAAAGTAAAAGAAAGCATCGGTCCAATGCAAAATCCGATAGCGATAGTGAGGCCTCTGTGTTTGAGACTGATAGTGGGTCCTCATCAGTTACTGAATCTGATGATTCTTCTGAAGAAAGCAGTTCAGATTACAGTTCTTCATCCGAATCAGAGTGCGAAAGGAGTCGAAGAAGGAGAAAGAAGCAGAAGAGGGGGAGAAGAAAGAGGAGGTACAGTTCGTCTTCTGATTCTTCTGATTCAGACTCAAGGTCTGAATCAGAATCTGATTCCGATAATGAACGTAGTAGGAGGAAGAGCCGACGACACAGCAGAAGACGCTAG

Protein sequence

MPFVSTFFNFLFSYLKDPSDPTRTNQIRVHIKSSPPPYFSFHSRFSTNWILLNLQTLRKILKKQTMSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKREAKRQMYLMSTEKAVRLGERKDIKGSMSSAGGAAAQCQKCYQMGHWTYECKNERVYISRPSRTQQLKNPKLRMKMEVSLELDNPDPGEEEKPKKHSKNKSKRKHRSNAKSDSDSEASVFETDSGSSSVTESDDSSEESSSDYSSSSESECERSRRRRKKQKRGRRKRRYSSSSDSSDSDSRSESESDSDNERSRRKSRRHSRRR

Homology

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BLAST of Cmc11g0288981 vs. NCBI nr
Match: XP_008460988.2 (PREDICTED: zinc finger CCHC domain-containing protein 10 [Cucumis melo] >XP_008460989.1 PREDICTED: zinc finger CCHC domain-containing protein 10 [Cucumis melo] >KAA0045615.1 zinc finger CCHC domain-containing protein 10 [Cucumis melo var. makuwa])

HSP 1 Score: 442.6 bits (1137), Expect = 3.0e-120
Identity = 264/264 (100.00%), Postives = 264/264 (100.00%), Query Frame = 0


Query: 66  MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 125
           MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR
Sbjct: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 60

Query: 126 EAKRQMYLMSTEKAVRLGERKDIKGSMSSAGGAAAQCQKCYQMGHWTYECKNERVYISRP 185
           EAKRQMYLMSTEKAVRLGERKDIKGSMSSAGGAAAQCQKCYQMGHWTYECKNERVYISRP
Sbjct: 61  EAKRQMYLMSTEKAVRLGERKDIKGSMSSAGGAAAQCQKCYQMGHWTYECKNERVYISRP 120

Query: 186 SRTQQLKNPKLRMKMEVSLELDNPDPGEEEKPKKHSKNKSKRKHRSNAKSDSDSEASVFE 245
           SRTQQLKNPKLRMKMEVSLELDNPDPGEEEKPKKHSKNKSKRKHRSNAKSDSDSEASVFE
Sbjct: 121 SRTQQLKNPKLRMKMEVSLELDNPDPGEEEKPKKHSKNKSKRKHRSNAKSDSDSEASVFE 180

Query: 246 TDSGSSSVTESDDSSEESSSDYSSSSESECERSRRRRKKQKRGRRKRRYSSSSDSSDSDS 305
           TDSGSSSVTESDDSSEESSSDYSSSSESECERSRRRRKKQKRGRRKRRYSSSSDSSDSDS
Sbjct: 181 TDSGSSSVTESDDSSEESSSDYSSSSESECERSRRRRKKQKRGRRKRRYSSSSDSSDSDS 240

Query: 306 RSESESDSDNERSRRKSRRHSRRR 330
           RSESESDSDNERSRRKSRRHSRRR
Sbjct: 241 RSESESDSDNERSRRKSRRHSRRR 264

[Close]

BLAST of Cmc11g0288981 vs. NCBI nr
Match: XP_011649249.1 (zinc finger CCHC domain-containing protein 10 [Cucumis sativus] >KGN61833.1 hypothetical protein Csa_006617 [Cucumis sativus])

HSP 1 Score: 430.3 bits (1105), Expect = 1.5e-116
Identity = 258/264 (97.73%), Postives = 261/264 (98.86%), Query Frame = 0


Query: 66  MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 125
           MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR
Sbjct: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 60

Query: 126 EAKRQMYLMSTEKAVRLGERKDIKGSMSSAGGAAAQCQKCYQMGHWTYECKNERVYISRP 185
           EAKRQMYLMSTEKAVRLGERKDIKGSMS AGGAAAQCQKCYQMGHWTYECKNERVYISRP
Sbjct: 61  EAKRQMYLMSTEKAVRLGERKDIKGSMSGAGGAAAQCQKCYQMGHWTYECKNERVYISRP 120

Query: 186 SRTQQLKNPKLRMKMEVSLELDNPDPGEEEKPKKHSKNKSKRKHRSNAKSDSDSEASVFE 245
           SRTQQLKNPKLRMKMEVSLELDNPDPGEE+KPKKHSK KSKRKHRSNAKS+SDSEASVFE
Sbjct: 121 SRTQQLKNPKLRMKMEVSLELDNPDPGEEKKPKKHSKKKSKRKHRSNAKSNSDSEASVFE 180

Query: 246 TDSGSSSVTESDDSSEESSSDYSSSSESECERSRRRRKKQKRGRRKRRYSSSSDSSDSDS 305
           TDSGSSSVTESDDSSEESSSDYSSSSESE ERSRRRRKKQKRGRRKRRYSSSSDSSDSDS
Sbjct: 181 TDSGSSSVTESDDSSEESSSDYSSSSESESERSRRRRKKQKRGRRKRRYSSSSDSSDSDS 240

Query: 306 RSESESDSDNERSRRKSRRHSRRR 330
           RSESESDSDNERSRRKSRRHSR+R
Sbjct: 241 RSESESDSDNERSRRKSRRHSRKR 264

[Close]

BLAST of Cmc11g0288981 vs. NCBI nr
Match: KAG6575110.1 (Zinc finger CCHC domain-containing protein 10, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 404.4 bits (1038), Expect = 9.1e-109
Identity = 261/306 (85.29%), Postives = 271/306 (88.56%), Query Frame = 0


Query: 30  HIKSSPPPYFSFHSRFSTNWILLNLQTLRK--ILKKQTMSSKKEEKSQAAAERIKAAALS 89
           HI S   P  +  S    NWI L+L+ L K  ILKKQ+MSSKKEEKSQAAAERIKAAALS
Sbjct: 5   HITS---PSTAILSTSHANWIPLHLRYLSKIQILKKQSMSSKKEEKSQAAAERIKAAALS 64

Query: 90  AAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKREAKRQMYLMSTEKAVRLGERKD 149
           AAKGLSRAQAERAA AAARNVNAYGQKEEGPSRWQEKREAKRQMYLMSTEKAVRLGERKD
Sbjct: 65  AAKGLSRAQAERAATAAARNVNAYGQKEEGPSRWQEKREAKRQMYLMSTEKAVRLGERKD 124

Query: 150 IKGSMSSAGGAAAQCQKCYQMGHWTYECKNERVYISRPSRTQQLKNPKLRMKMEVSLELD 209
           IK SMS+AGGAAAQCQKCYQ GHWTYECKNERVYISRPSRTQQLKNPKLRMKM VSLELD
Sbjct: 125 IKVSMSTAGGAAAQCQKCYQSGHWTYECKNERVYISRPSRTQQLKNPKLRMKMAVSLELD 184

Query: 210 NPDPGEEEK--PKKHSKNKSKRKHRSNAKSDSDSEASVFETDSGSSSVTESDDSSEESSS 269
           NPD G+EEK   KK  K KSKRKHRS  KS+SDSEASVFETDSGSSSVT SDDSSEESSS
Sbjct: 185 NPDSGDEEKKTKKKQLKKKSKRKHRSEPKSNSDSEASVFETDSGSSSVTGSDDSSEESSS 244

Query: 270 DYSSSSESECERS--RRRRKKQKRGRRKRRYSSSSDSSDSDSRSESESDSDNERSRRKSR 329
           DYSSSS+SE ERS  RRRRKKQKRGRRKRRYSSSSDSSDSDS SESESDSD+ERSRRKSR
Sbjct: 245 DYSSSSDSESERSRRRRRRKKQKRGRRKRRYSSSSDSSDSDSESESESDSDHERSRRKSR 304

[Close]

BLAST of Cmc11g0288981 vs. NCBI nr
Match: KAG7013679.1 (Zinc finger CCHC domain-containing protein 10 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 389.0 bits (998), Expect = 4.0e-104
Identity = 245/268 (91.42%), Postives = 250/268 (93.28%), Query Frame = 0


Query: 66  MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 125
           MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAA AAARNVNAYGQKEEGPSRWQEKR
Sbjct: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAATAAARNVNAYGQKEEGPSRWQEKR 60

Query: 126 EAKRQMYLMSTEKAVRLGERKDIKGSMSSAGGAAAQCQKCYQMGHWTYECKNERVYISRP 185
           EAKRQMYLMSTEKAVRLGERKDIK SMSSAGGAAAQCQKCYQ GHWTYECKNERVYISRP
Sbjct: 61  EAKRQMYLMSTEKAVRLGERKDIKVSMSSAGGAAAQCQKCYQSGHWTYECKNERVYISRP 120

Query: 186 SRTQQLKNPKLRMKMEVSLELDNPDPGEEEK--PKKHSKNKSKRKHRSNAKSDSDSEASV 245
           SRTQQLKNPKLRMKM VSLELDNPD G+EEK   KK  K KSKRKHRS  KS+SDSEASV
Sbjct: 121 SRTQQLKNPKLRMKMAVSLELDNPDSGDEEKKTKKKQLKKKSKRKHRSEPKSNSDSEASV 180

Query: 246 FETDSGSSSVTESDDSSEESSSDYSSSSESECERS--RRRRKKQKRGRRKRRYSSSSDSS 305
           FETDSGSSSVT SDDSSEESSSDYSSSS+SE ERS  RRRRKKQKRGRRKRRYSSSSDSS
Sbjct: 181 FETDSGSSSVTGSDDSSEESSSDYSSSSDSESERSRRRRRRKKQKRGRRKRRYSSSSDSS 240

Query: 306 DSDSRSESESDSDNERSRRKSRRHSRRR 330
           DSDS SESESDSD+ERSRRKSRRHSR+R
Sbjct: 241 DSDSESESESDSDHERSRRKSRRHSRKR 268

[Close]

BLAST of Cmc11g0288981 vs. NCBI nr
Match: XP_022959515.1 (zinc finger CCHC domain-containing protein 10-like [Cucurbita moschata])

HSP 1 Score: 388.3 bits (996), Expect = 6.7e-104
Identity = 245/268 (91.42%), Postives = 250/268 (93.28%), Query Frame = 0


Query: 66  MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 125
           MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAA AAARNVNAYGQKEEGPSRWQEKR
Sbjct: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAATAAARNVNAYGQKEEGPSRWQEKR 60

Query: 126 EAKRQMYLMSTEKAVRLGERKDIKGSMSSAGGAAAQCQKCYQMGHWTYECKNERVYISRP 185
           EAKRQMYLMSTEKAVRLGERKDIK SMSSAGGAAAQCQKCYQ GHWTYECKNERVYISRP
Sbjct: 61  EAKRQMYLMSTEKAVRLGERKDIKVSMSSAGGAAAQCQKCYQSGHWTYECKNERVYISRP 120

Query: 186 SRTQQLKNPKLRMKMEVSLELDNPDPGEEEK--PKKHSKNKSKRKHRSNAKSDSDSEASV 245
           SRTQQLKNPKLRMKM VSLELDNPD G+EEK   KK  K KSKRKHRS  KS+SDSEASV
Sbjct: 121 SRTQQLKNPKLRMKMAVSLELDNPDSGDEEKKTKKKQLKKKSKRKHRSEPKSNSDSEASV 180

Query: 246 FETDSGSSSVTESDDSSEESSSDYSSSSESECERS--RRRRKKQKRGRRKRRYSSSSDSS 305
           FETDSGSSSVT SDDSSEESSSDYSSSS+SE ERS  RRRRKKQKRGRRKRRYSSSSDSS
Sbjct: 181 FETDSGSSSVTGSDDSSEESSSDYSSSSDSESERSRRRRRRKKQKRGRRKRRYSSSSDSS 240

Query: 306 DSDSRSESESDSDNERSRRKSRRHSRRR 330
           DSDS SESESDSD+ERSRRKSRRHSR+R
Sbjct: 241 DSDSGSESESDSDHERSRRKSRRHSRKR 268

[Close]

BLAST of Cmc11g0288981 vs. ExPASy Swiss-Prot
Match: Q5EB97 (Zinc finger CCHC domain-containing protein 10 OS=Rattus norvegicus OX=10116 GN=Zcchc10 PE=2 SV=2)

HSP 1 Score: 55.1 bits (131), Expect = 1.8e-06
Identity = 66/166 (39.76%), Postives = 85/166 (51.20%), Query Frame = 0


Query: 161 QCQKCYQMGHWTYECKNERVYISRPSRTQQLKNPKLRMKMEVSLELDNPDPGEEEKPKKH 220
           +CQKC + GHWTYECK +R Y+ RPSRT +LK   L+ K    L+    +   E K KK 
Sbjct: 22  RCQKCLEFGHWTYECKGKRKYLHRPSRTAELKK-ALKEKENRLLQQSMGETNTERKTKKK 81

Query: 221 SKNKSKRKHRSNAKSDSDSEASVFETDSGSSSVTESDD-----SSEESSSDYSSSSESEC 280
            + KS     S + SDS +  S  E+++ +SS +E  D     SS  SSS YSSSS S  
Sbjct: 82  RRPKSV---TSTSSSDSSASESSSESETSASSSSEDSDADGSLSSSSSSSAYSSSSSSSS 141

Query: 281 ERSRRRRKKQKRGRRKRRYSSSSDSSDSDSRSESESDSDNERSRRK 322
             S                S SS SS S S SES SD +  + R+K
Sbjct: 142 SSSSSSSD-----------SDSSSSSSSSSSSESSSDDEPPKKRKK 172

[Close]

BLAST of Cmc11g0288981 vs. ExPASy Swiss-Prot
Match: Q9CX48 (Zinc finger CCHC domain-containing protein 10 OS=Mus musculus OX=10090 GN=Zcchc10 PE=2 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 3.0e-06
Identity = 64/164 (39.02%), Postives = 83/164 (50.61%), Query Frame = 0


Query: 161 QCQKCYQMGHWTYECKNERVYISRPSRTQQLKNPKLRMKMEVSLELDNPDPGEEEKPKKH 220
           +CQKC + GHWTYECK +R Y+ RPSRT +LK      +  + L+      GE    KK 
Sbjct: 22  RCQKCLEFGHWTYECKGKRKYLHRPSRTAELKKALKEKENRLLLQ----SIGETNIEKKI 81

Query: 221 SKNKSKRKHRSNAKSDSDSEASVFETDSGSSSVTESDDSSEESSSDYSSSSESECERSRR 280
            K K  +   S++ S SDS AS    +S S S T +  SSE+S SD S SS S    S  
Sbjct: 82  KKKKRSKSVTSSSTSSSDSSAS----ESSSESETSASSSSEDSDSDESLSSSSSSSSSSA 141

Query: 281 RRKKQKRGRRKRRYSSSSDSSDSDSRSESESDSDNERSRRKSRR 325
                          S S SS S S S SES SD+E  ++K ++
Sbjct: 142 CSSSSSSSSSSSSSDSDSSSSSSSSSSSSESSSDDEPQKKKKKK 177

[Close]

BLAST of Cmc11g0288981 vs. ExPASy Swiss-Prot
Match: Q8TBK6 (Zinc finger CCHC domain-containing protein 10 OS=Homo sapiens OX=9606 GN=ZCCHC10 PE=1 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 4.4e-05
Identity = 65/179 (36.31%), Postives = 87/179 (48.60%), Query Frame = 0


Query: 152 MSSAGGAAAQCQKCYQMGHWTYECKNERVYISRPSRTQQLKNPKLRMKMEVSLELDNPDP 211
           +S A     +CQKC + GHWTYEC  +R Y+ RPSRT +LK      +  + L+    + 
Sbjct: 35  ISEANKQHVRCQKCLEFGHWTYECTGKRKYLHRPSRTAELKKALKEKENRLLLQQSIGET 94

Query: 212 GEEEKPKKHSKNKSKRKHRSNAKSDSDSEASVFETDSGSSSVTESDDSSEESSSDYSSSS 271
             E K KK    K  +   S++ S SDS AS     S  S  T +  SSE+S +D SSSS
Sbjct: 95  NVERKAKK----KRSKSVTSSSSSSSDSSAS---DSSSESEETSTSSSSEDSDTDESSSS 154

Query: 272 ESECERSRRRRKKQKRGRRKRRYSSSSDSSDSDSRSES------ESDSDNERSRRKSRR 325
            S    S                SSSS  SDSDS S S      +S SD+E  ++K ++
Sbjct: 155 SSSSASSTT--------------SSSSSDSDSDSSSSSSSSTSTDSSSDDEPPKKKKKK 192

[Close]

BLAST of Cmc11g0288981 vs. ExPASy TrEMBL
Match: A0A1S3CDQ2 (zinc finger CCHC domain-containing protein 10 OS=Cucumis melo OX=3656 GN=LOC103499707 PE=4 SV=1)

HSP 1 Score: 442.6 bits (1137), Expect = 1.5e-120
Identity = 264/264 (100.00%), Postives = 264/264 (100.00%), Query Frame = 0


Query: 66  MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 125
           MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR
Sbjct: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 60

Query: 126 EAKRQMYLMSTEKAVRLGERKDIKGSMSSAGGAAAQCQKCYQMGHWTYECKNERVYISRP 185
           EAKRQMYLMSTEKAVRLGERKDIKGSMSSAGGAAAQCQKCYQMGHWTYECKNERVYISRP
Sbjct: 61  EAKRQMYLMSTEKAVRLGERKDIKGSMSSAGGAAAQCQKCYQMGHWTYECKNERVYISRP 120

Query: 186 SRTQQLKNPKLRMKMEVSLELDNPDPGEEEKPKKHSKNKSKRKHRSNAKSDSDSEASVFE 245
           SRTQQLKNPKLRMKMEVSLELDNPDPGEEEKPKKHSKNKSKRKHRSNAKSDSDSEASVFE
Sbjct: 121 SRTQQLKNPKLRMKMEVSLELDNPDPGEEEKPKKHSKNKSKRKHRSNAKSDSDSEASVFE 180

Query: 246 TDSGSSSVTESDDSSEESSSDYSSSSESECERSRRRRKKQKRGRRKRRYSSSSDSSDSDS 305
           TDSGSSSVTESDDSSEESSSDYSSSSESECERSRRRRKKQKRGRRKRRYSSSSDSSDSDS
Sbjct: 181 TDSGSSSVTESDDSSEESSSDYSSSSESECERSRRRRKKQKRGRRKRRYSSSSDSSDSDS 240

Query: 306 RSESESDSDNERSRRKSRRHSRRR 330
           RSESESDSDNERSRRKSRRHSRRR
Sbjct: 241 RSESESDSDNERSRRKSRRHSRRR 264

[Close]

BLAST of Cmc11g0288981 vs. ExPASy TrEMBL
Match: A0A5A7TW64 (Zinc finger CCHC domain-containing protein 10 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G001260 PE=4 SV=1)

HSP 1 Score: 442.6 bits (1137), Expect = 1.5e-120
Identity = 264/264 (100.00%), Postives = 264/264 (100.00%), Query Frame = 0


Query: 66  MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 125
           MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR
Sbjct: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 60

Query: 126 EAKRQMYLMSTEKAVRLGERKDIKGSMSSAGGAAAQCQKCYQMGHWTYECKNERVYISRP 185
           EAKRQMYLMSTEKAVRLGERKDIKGSMSSAGGAAAQCQKCYQMGHWTYECKNERVYISRP
Sbjct: 61  EAKRQMYLMSTEKAVRLGERKDIKGSMSSAGGAAAQCQKCYQMGHWTYECKNERVYISRP 120

Query: 186 SRTQQLKNPKLRMKMEVSLELDNPDPGEEEKPKKHSKNKSKRKHRSNAKSDSDSEASVFE 245
           SRTQQLKNPKLRMKMEVSLELDNPDPGEEEKPKKHSKNKSKRKHRSNAKSDSDSEASVFE
Sbjct: 121 SRTQQLKNPKLRMKMEVSLELDNPDPGEEEKPKKHSKNKSKRKHRSNAKSDSDSEASVFE 180

Query: 246 TDSGSSSVTESDDSSEESSSDYSSSSESECERSRRRRKKQKRGRRKRRYSSSSDSSDSDS 305
           TDSGSSSVTESDDSSEESSSDYSSSSESECERSRRRRKKQKRGRRKRRYSSSSDSSDSDS
Sbjct: 181 TDSGSSSVTESDDSSEESSSDYSSSSESECERSRRRRKKQKRGRRKRRYSSSSDSSDSDS 240

Query: 306 RSESESDSDNERSRRKSRRHSRRR 330
           RSESESDSDNERSRRKSRRHSRRR
Sbjct: 241 RSESESDSDNERSRRKSRRHSRRR 264

[Close]

BLAST of Cmc11g0288981 vs. ExPASy TrEMBL
Match: A0A0A0LJ33 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G249870 PE=4 SV=1)

HSP 1 Score: 430.3 bits (1105), Expect = 7.5e-117
Identity = 258/264 (97.73%), Postives = 261/264 (98.86%), Query Frame = 0


Query: 66  MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 125
           MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR
Sbjct: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 60

Query: 126 EAKRQMYLMSTEKAVRLGERKDIKGSMSSAGGAAAQCQKCYQMGHWTYECKNERVYISRP 185
           EAKRQMYLMSTEKAVRLGERKDIKGSMS AGGAAAQCQKCYQMGHWTYECKNERVYISRP
Sbjct: 61  EAKRQMYLMSTEKAVRLGERKDIKGSMSGAGGAAAQCQKCYQMGHWTYECKNERVYISRP 120

Query: 186 SRTQQLKNPKLRMKMEVSLELDNPDPGEEEKPKKHSKNKSKRKHRSNAKSDSDSEASVFE 245
           SRTQQLKNPKLRMKMEVSLELDNPDPGEE+KPKKHSK KSKRKHRSNAKS+SDSEASVFE
Sbjct: 121 SRTQQLKNPKLRMKMEVSLELDNPDPGEEKKPKKHSKKKSKRKHRSNAKSNSDSEASVFE 180

Query: 246 TDSGSSSVTESDDSSEESSSDYSSSSESECERSRRRRKKQKRGRRKRRYSSSSDSSDSDS 305
           TDSGSSSVTESDDSSEESSSDYSSSSESE ERSRRRRKKQKRGRRKRRYSSSSDSSDSDS
Sbjct: 181 TDSGSSSVTESDDSSEESSSDYSSSSESESERSRRRRKKQKRGRRKRRYSSSSDSSDSDS 240

Query: 306 RSESESDSDNERSRRKSRRHSRRR 330
           RSESESDSDNERSRRKSRRHSR+R
Sbjct: 241 RSESESDSDNERSRRKSRRHSRKR 264

[Close]

BLAST of Cmc11g0288981 vs. ExPASy TrEMBL
Match: A0A6J1H6H5 (zinc finger CCHC domain-containing protein 10-like OS=Cucurbita moschata OX=3662 GN=LOC111460472 PE=4 SV=1)

HSP 1 Score: 388.3 bits (996), Expect = 3.3e-104
Identity = 245/268 (91.42%), Postives = 250/268 (93.28%), Query Frame = 0


Query: 66  MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 125
           MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAA AAARNVNAYGQKEEGPSRWQEKR
Sbjct: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAATAAARNVNAYGQKEEGPSRWQEKR 60

Query: 126 EAKRQMYLMSTEKAVRLGERKDIKGSMSSAGGAAAQCQKCYQMGHWTYECKNERVYISRP 185
           EAKRQMYLMSTEKAVRLGERKDIK SMSSAGGAAAQCQKCYQ GHWTYECKNERVYISRP
Sbjct: 61  EAKRQMYLMSTEKAVRLGERKDIKVSMSSAGGAAAQCQKCYQSGHWTYECKNERVYISRP 120

Query: 186 SRTQQLKNPKLRMKMEVSLELDNPDPGEEEK--PKKHSKNKSKRKHRSNAKSDSDSEASV 245
           SRTQQLKNPKLRMKM VSLELDNPD G+EEK   KK  K KSKRKHRS  KS+SDSEASV
Sbjct: 121 SRTQQLKNPKLRMKMAVSLELDNPDSGDEEKKTKKKQLKKKSKRKHRSEPKSNSDSEASV 180

Query: 246 FETDSGSSSVTESDDSSEESSSDYSSSSESECERS--RRRRKKQKRGRRKRRYSSSSDSS 305
           FETDSGSSSVT SDDSSEESSSDYSSSS+SE ERS  RRRRKKQKRGRRKRRYSSSSDSS
Sbjct: 181 FETDSGSSSVTGSDDSSEESSSDYSSSSDSESERSRRRRRRKKQKRGRRKRRYSSSSDSS 240

Query: 306 DSDSRSESESDSDNERSRRKSRRHSRRR 330
           DSDS SESESDSD+ERSRRKSRRHSR+R
Sbjct: 241 DSDSGSESESDSDHERSRRKSRRHSRKR 268

[Close]

BLAST of Cmc11g0288981 vs. ExPASy TrEMBL
Match: A0A6J1L1Z2 (zinc finger CCHC domain-containing protein 10 OS=Cucurbita maxima OX=3661 GN=LOC111499120 PE=4 SV=1)

HSP 1 Score: 387.1 bits (993), Expect = 7.3e-104
Identity = 243/268 (90.67%), Postives = 250/268 (93.28%), Query Frame = 0


Query: 66  MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 125
           MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAA AAARNVNAYGQKEEGPSRWQEKR
Sbjct: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAATAAARNVNAYGQKEEGPSRWQEKR 60

Query: 126 EAKRQMYLMSTEKAVRLGERKDIKGSMSSAGGAAAQCQKCYQMGHWTYECKNERVYISRP 185
           EAKRQMYLMSTEKAVRLGERKDIK SMSSAGGAAAQCQKCYQ GHWTYECKNERVYISRP
Sbjct: 61  EAKRQMYLMSTEKAVRLGERKDIKVSMSSAGGAAAQCQKCYQSGHWTYECKNERVYISRP 120

Query: 186 SRTQQLKNPKLRMKMEVSLELDNPDPGEEEK--PKKHSKNKSKRKHRSNAKSDSDSEASV 245
           SRTQQLKNPKLRMKM VSLE+DNPD G+EEK   K+  K KSKRKHRS  KS+SDSEASV
Sbjct: 121 SRTQQLKNPKLRMKMAVSLEMDNPDSGDEEKKTKKRQLKKKSKRKHRSELKSNSDSEASV 180

Query: 246 FETDSGSSSVTESDDSSEESSSDYSSSSESECERS--RRRRKKQKRGRRKRRYSSSSDSS 305
           FETDSGSSSVT SDDSSEESSSDYSSSS+SE ERS  RRRRKKQKRGRRKRRYSSSSDSS
Sbjct: 181 FETDSGSSSVTGSDDSSEESSSDYSSSSDSESERSRRRRRRKKQKRGRRKRRYSSSSDSS 240

Query: 306 DSDSRSESESDSDNERSRRKSRRHSRRR 330
           DSDS SESESDSD+ERSRRKSRRHSR+R
Sbjct: 241 DSDSESESESDSDHERSRRKSRRHSRKR 268

[Close]

BLAST of Cmc11g0288981 vs. TAIR 10
Match: AT5G49400.1 (zinc knuckle (CCHC-type) family protein )

HSP 1 Score: 265.8 bits (678), Expect = 4.7e-71
Identity = 188/283 (66.43%), Postives = 216/283 (76.33%), Query Frame = 0


Query: 66  MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 125
           MS+ K+EKSQ AA+RIKAA L+AAKGLSR QAERAAAAAARNVNAYGQKEEGPSRWQEKR
Sbjct: 1   MSNSKDEKSQDAADRIKAATLTAAKGLSRTQAERAAAAAARNVNAYGQKEEGPSRWQEKR 60

Query: 126 EAKRQMYLMSTEKAVRLGERKDIKGSMSSAG---GAAAQCQKCYQMGHWTYECKNERVYI 185
           E KRQMYLMSTEKAVRLGERKD   S S+ G    AA+QCQKC+Q GHWTYECKNERVYI
Sbjct: 61  ELKRQMYLMSTEKAVRLGERKDKTMSASAVGSSASAASQCQKCFQAGHWTYECKNERVYI 120

Query: 186 SRPSRTQQLKNPKLRMKMEVSLELDNPDPGEEEKP---------KKHSKNKSKRKHRSNA 245
           SRPSRTQQLKNPKLR K  V     + D  EEE+P         +K SK KSKRKHRS +
Sbjct: 121 SRPSRTQQLKNPKLRTKPSVDDLDGSDDDDEEERPDATNGKAEVEKRSK-KSKRKHRSKS 180

Query: 246 KSDSDSEASVFETDSGSSSVTESDDSSEESSSDYSSSSESECERSRRR-------RKKQK 305
            S+SDSEASVFETD        SD SS ESSS+YSSSS+SE ER RRR       ++KQ+
Sbjct: 181 DSESDSEASVFETD--------SDGSSGESSSEYSSSSDSEDERRRRRKAKKSKKKQKQR 240

Query: 306 RGRRKRRYSSSSDSSDSDSRSESESDSDNERSRRKSRRHSRRR 330
           + RR+R  SSSS+SS+S+S S+S+SD D  R ++KS+RHS +R
Sbjct: 241 KERRRRYSSSSSESSESESASDSDSDEDRSRRKKKSKRHSNKR 274

The following BLAST results are available for this feature:

BLAST of Cmc11g0288981 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008460988.2	3.0e-120	100.00	PREDICTED: zinc finger CCHC domain-containing protein 10 [Cucumis melo] >XP_0084...	[more]
XP_011649249.1	1.5e-116	97.73	zinc finger CCHC domain-containing protein 10 [Cucumis sativus] >KGN61833.1 hypo...	[more]
KAG6575110.1	9.1e-109	85.29	Zinc finger CCHC domain-containing protein 10, partial [Cucurbita argyrosperma s...	[more]
KAG7013679.1	4.0e-104	91.42	Zinc finger CCHC domain-containing protein 10 [Cucurbita argyrosperma subsp. arg...	[more]
XP_022959515.1	6.7e-104	91.42	zinc finger CCHC domain-containing protein 10-like [Cucurbita moschata]	[more]

BLAST of Cmc11g0288981 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5EB97	1.8e-06	39.76	Zinc finger CCHC domain-containing protein 10 OS=Rattus norvegicus OX=10116 GN=Z...	[more]
Q9CX48	3.0e-06	39.02	Zinc finger CCHC domain-containing protein 10 OS=Mus musculus OX=10090 GN=Zcchc1...	[more]
Q8TBK6	4.4e-05	36.31	Zinc finger CCHC domain-containing protein 10 OS=Homo sapiens OX=9606 GN=ZCCHC10...	[more]

BLAST of Cmc11g0288981 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CDQ2	1.5e-120	100.00	zinc finger CCHC domain-containing protein 10 OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
A0A5A7TW64	1.5e-120	100.00	Zinc finger CCHC domain-containing protein 10 OS=Cucumis melo var. makuwa OX=119...	[more]
A0A0A0LJ33	7.5e-117	97.73	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G249870 PE=4 SV=1	[more]
A0A6J1H6H5	3.3e-104	91.42	zinc finger CCHC domain-containing protein 10-like OS=Cucurbita moschata OX=3662...	[more]
A0A6J1L1Z2	7.3e-104	90.67	zinc finger CCHC domain-containing protein 10 OS=Cucurbita maxima OX=3661 GN=LOC...	[more]

BLAST of Cmc11g0288981 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G49400.1	4.7e-71	66.43	zinc knuckle (CCHC-type) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF13917	zf-CCHC_3	coord: 157..194 e-value: 4.0E-20 score: 71.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 294..319
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 206..220
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 237..271
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 206..329
IPR039715	Zinc finger CCHC domain-containing protein 10	PANTHER	PTHR13491	ZCCHC10 PROTEIN	coord: 66..316
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 147..178

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc11g0288981.1	Cmc11g0288981.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding