Cmc11g0288811 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc11g0288811
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Unknown protein
Location	CMiso1.1chr11: 3290442 .. 3292964 (+)
RNA-Seq Expression	Cmc11g0288811
Synteny	Cmc11g0288811

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGAACTTTATTATCGAAATAATTTCCAAGAAACCCTATTTCTTTCTAAACAAAACCCCTAAACTGTCTATTGTTAGAGGGTCAGTTGTAAGCCCAAATCCTAAAGGAAAAAGCGGATTGTAATTCTCATCCCCATAGTTCATCGGAAGTTGATCCGCAGTCTTCAACCACGTCCTCCCTAACTTTCCGGTGAACCCATATTCTCCGTGTAGCACGTCCGTCACGCCCTCCCCTTCCGTTCCCGGCAGCCACGCCACCACCAGCGCGTCCAACTGTGACATGTATTGCTGGCGGCCGGAGACGATGACAACGATGCACTTAACTCAGTTGCACACGTTCTGGATCGTGTCCGAGCCTCCTTCGGCGATCGTTAGGTTCAGGTTTTCGCCTTTGGACTCGGCGGACGGCGTTTCTCCTACAATGAATATTGCGTACGAGAAGTTGTTCGCCTTGACGTAATCGGTTGTTGGATTTACGTTGTAGATGACCTCCGTGTTTGGATCAACGGTTTTCTTCACTGCCTCGAGAATGGTGGTTCCGGTTGTGAGGTTGTTGCCTCTGAGTCCTTGCCGGGTGATTGTCCGGCCGCTGCATTGGTAACCTAGATTGTTGGCGTGAGTTCCGGCTACCGAGATCTTCGGTGCTTTCTTTGACAGAGGAAGAACTGGTTCGTCAGCATTTTCGACATTCTTCAATAGAACAAGTGATTTCCTCACTGCTTCTGTTGCCAAATCTTTGTGTTCCTGTTCAGTGTTCAATTGAATTGGTATAACATTTCAATTTAAACTACATTTCTTTGTCTTTTCAGATCAACTAACCTGGCTTCCAAGCTCATTTACAGATCTGTCATCCGCCAATGGATTCTCAAACAGGTCCATCATAACCTCGACTCTCAAAATCCTTCTCACAGCGTCGTTGATTCGGGACATCGGAATGGCGTTCTTAACGACAAGGTAGGTAAGGCCATCGATGAACTCGGTGTATTTTTTGGAAAGTTATTGTAATTAAATGCAAGGTGGAAAGATTTGAATCCGGGTCCTCTGATCCACAGGTAGATACAGGTCCAGTTGAGCTTAGCTCAACTTGGCAACTCAATGTAATTTTCAGGAACCATAATCTAAAACACGACAATAAAACTAGTTTTATAAGATGTATAGATGCTATGTTGATTATCTTACCATGTCTATTCCATCTTGAACTCCAGAGAGGATTGAGAATGTGTAGTTTGAATGAGCTGGGTCTATGATCTTATCAATACCTTCTCAATCGGAGATTACTAAACCCTGCAATAGTTACGTGTGTTCAAATTTAGGGGACTTTCATTGTATAGGCTTATTATCCATGAGGATCTAGTGCCAATACATACCCTGAAGTTTAGACTGTTCTTAAGGAAATCAACGACGAGTCCATGGTTTGAATGCATTTTCGCACCGTTCCCAATCTTGGATCTCTACAGACCTGAAATGAAAATGCTCATAGTTCTATTTGAATTAGACAAGTTTATATAAAGAAAGAGAAATGAATTTTAGAAAACATACTGCTATGCATGGAGCAAAGATATAATCAATCCCAGTTCCTCTAACTTCTTTACCAGTAGCAGCACCAATCCTTCTTAAAAGTTCAGGTTCCCTGTCACATGAGAAAACTATTTAGCCACCAATAACTCCATATCGATGGCATCGGCAGTTCGTAAAAACGAAGTTTAGATCCTCCTCTCATGTATTTTCACCTGGTTACACCAACCGAGATTGTGGGGGAAGACGGTAGCATTGTAGACACCGTTGTGACCATGGACAGCATCAATACCGTACATTATTGGAATTCCAAGCCTACTTGATAATGTGGCCTGTTGGAATGAATTCACCATGGCAATCCACTCCTGTGCAGTAGCCTTTAGAGATGGGGTACTGCCTCCGCTGCTAAGCACACTGCCAATGGAGTAATCTCTTATGATTTCCGGTGTGATGGCCGAAGAATCCAACTGTGCCATCTGCCCAACCTTATCTGCTAGAGTCATTCTATCCATCAGGTCCTTGATCCGGATGTTAAGCGGCTGTATAGGGTCCTTATACATGACATAGTCTTCATCAACAGCCACCAAAGCTGCCCAGCAACAGAGTAAAACCACCTGATCACCTTCATCTTCTTCTTGGTGAATGGAACCTTGCAGAAATTGAGTTCAGATCTATCTTTAGGTTGATTATGCCTTTTTTATTTCATATGGTCAAGTTGGTAGTCCTTAAATTTTTCTTTCTCCTCCATTTTAGGTATAACCTACGACGGGTTTTGAAATACCAATTCTCAAAACCCGTTGTAGGTTATCTTCTCGGAGAAAGATTTTTAACTTAATTGCTACTTTGTTTTGGATTTGCTGTTGGAATGAAAGAACCTCTTGATTTGCCTCAGAAATATTTCCATTTTGAAAAACAAATGGGTGATGAAATCATTATATGCTGATTGGCTGGTTGAGTATTGGTTTAATCTTTATTGTTTTGGCTTGTTAAAAGAATTGCAGCAATTTTCT

mRNA sequence

TGAACTTTATTATCGAAATAATTTCCAAGAAACCCTATTTCTTTCTAAACAAAACCCCTAAACTGTCTATTGTTAGAGGGTCAGTTGTAAGCCCAAATCCTAAAGGAAAAAGCGGATTGTAATTCTCATCCCCATAGTTCATCGGAAGTTGATCCGCAGTCTTCAACCACGTCCTCCCTAACTTTCCGGTGAACCCATATTCTCCGTGTAGCACGTCCGTCACGCCCTCCCCTTCCGTTCCCGGCAGCCACGCCACCACCAGCGCGTCCAACTGTGACATGTATTGCTGGCGGCCGGAGACGATGACAACGATGCACTTAACTCAGTTGCACACGTTCTGGATCGTGTCCGAGCCTCCTTCGGCGATCGTTAGGTTCAGGTTTTCGCCTTTGGACTCGGCGGACGGCGTTTCTCCTACAATGAATATTGCGTACGAGAAGTTGTTCGCCTTGACGTAATCGGTTGTTGGATTTACGTTGTAGATGACCTCCGTGTTTGGATCAACGGTTTTCTTCACTGCCTCGAGAATGGTGGTTCCGGTTGTGAGGTTGTTGCCTCTGAGTCCTTGCCGGGTGATTGTCCGGCCGCTGCATTGGTAACCTAGATTGTTGGCGTGAGTTCCGGCTACCGAGATCTTCGGTGCTTTCTTTGACAGAGGAAGAACTGATCAACTAACCTGGCTTCCAAGCTCATTTACAGATCTGTCATCCGCCAATGGATTCTCAAACAGGTCCATCATAACCTCGACTCTCAAAATCCTTCTCACAGCGTCGTTGATTCGGGACATCGGAATGGCGTTCTTAACGACAAGGTAGGTAAGGCCATCGATGAACTCGGTGTATTTTTTGGAAAGTTATTGTAATTAAATGCAAGGTGGAAAGATTTGAATCCGGGTCCTCTGATCCACAGGTAGATACAGGTCCAGTTGAGCTTAGCTCAACTTGGCAACTCAATGTAATTTTCAGGAACCATAATCTAAAACACGACAATAAAACTAGTTTTATAAGATGTATAGATGCTATGTTGATTATCTTACCATGTCTATTCCATCTTGAACTCCAGAGAGGATTGAGAATGTGTAGTTTGAATGAGCTGGGTCTATGATCTTATCAATACCTTCTCAATCGGAGATTACTAAACCCTGCAATAGTTACGTGTGTTCAAATTTAGGGGACTTTCATTGTATAGGCTTATTATCCATGAGGATCTAGTGCCAATACATACCCTGAAGTTTAGACTGTTCTTAAGGAAATCAACGACGAGTCCATGGTTTGAATGCATTTTCGCACCGTTCCCAATCTTGGATCTCTACAGACCTGAAATGAAAATGCTCATAGTTCTATTTGAATTAGACAAGTTTATATAAAGAAAGAGAAATGAATTTTAGAAAACATACTGCTATGCATGGAGCAAAGATATAATCAATCCCAGTTCCTCTAACTTCTTTACCAGTAGCAGCACCAATCCTTCTTAAAAGTTCAGGTTCCCTGTCACATGAGAAAACTATTTAGCCACCAATAACTCCATATCGATGGCATCGGCAGTTCGTAAAAACGAAGTTTAGATCCTCCTCTCATGTATTTTCACCTGGTTACACCAACCGAGATTGTGGGGGAAGACGGTAGCATTGTAGACACCGTTGTGACCATGGACAGCATCAATACCGTACATTATTGGAATTCCAAGCCTACTTGATAATGTGGCCTGTTGGAATGAATTCACCATGGCAATCCACTCCTGTGCAGTAGCCTTTAGAGATGGGGTACTGCCTCCGCTGCTAAGCACACTGCCAATGGAGTAATCTCTTATGATTTCCGGTGTGATGGCCGAAGAATCCAACTGTGCCATCTGCCCAACCTTATCTGCTAGAGTCATTCTATCCATCAGGTCCTTGATCCGGATGTTAAGCGGCTGTATAGGGTCCTTATACATGACATAGTCTTCATCAACAGCCACCAAAGCTGCCCAGCAACAGAGTAAAACCACCTGATCACCTTCATCTTCTTCTTGGTGAATGGAACCTTGCAGAAATTGAGTTCAGATCTATCTTTAGGTTGATTATGCCTTTTTTATTTCATATGGTCAAGTTGGTAGTCCTTAAATTTTTCTTTCTCCTCCATTTTAGGTATAACCTACGACGGGTTTTGAAATACCAATTCTCAAAACCCGTTGTAGGTTATCTTCTCGGAGAAAGATTTTTAACTTAATTGCTACTTTGTTTTGGATTTGCTGTTGGAATGAAAGAACCTCTTGATTTGCCTCAGAAATATTTCCATTTTGAAAAACAAATGGGTGATGAAATCATTATATGCTGATTGGCTGGTTGAGTATTGGTTTAATCTTTATTGTTTTGGCTTGTTAAAAGAATTGCAGCAATTTTCT

Coding sequence (CDS)

ATGTATTGCTGGCGGCCGGAGACGATGACAACGATGCACTTAACTCAGTTGCACACGTTCTGGATCGTGTCCGAGCCTCCTTCGGCGATCGTTAGGTTCAGGTTTTCGCCTTTGGACTCGGCGGACGGCGTTTCTCCTACAATGAATATTGCGTACGAGAAGTTGTTCGCCTTGACGTAA

Protein sequence

MYCWRPETMTTMHLTQLHTFWIVSEPPSAIVRFRFSPLDSADGVSPTMNIAYEKLFALT

Homology

[Close]

BLAST of Cmc11g0288811 vs. NCBI nr
Match: RHN50780.1 (hypothetical protein MtrunA17_Chr6g0461201 [Medicago truncatula])

HSP 1 Score: 54.3 bits (129), Expect = 4.1e-04
Identity = 29/54 (53.70%), Postives = 32/54 (59.26%), Query Frame = 0


Query: 6  PETMTTMHLTQLHTFWIVSEPPSAIVRFRFSPLDSADGVSPTMNIAYEKLFALT 60
          P T TT H T  HT +IVS P   IV+F+ SP  SA GVSPT   AYEK    T
Sbjct: 6  PVTNTTTHFTLPHTLFIVSVPLPEIVKFKLSPFVSAYGVSPTTTTAYEKSLDFT 59

[Close]

BLAST of Cmc11g0288811 vs. ExPASy TrEMBL
Match: A0A396HBS0 (Uncharacterized protein OS=Medicago truncatula OX=3880 GN=MtrunA17_Chr6g0461201 PE=4 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 2.0e-04
Identity = 29/54 (53.70%), Postives = 32/54 (59.26%), Query Frame = 0


Query: 6  PETMTTMHLTQLHTFWIVSEPPSAIVRFRFSPLDSADGVSPTMNIAYEKLFALT 60
          P T TT H T  HT +IVS P   IV+F+ SP  SA GVSPT   AYEK    T
Sbjct: 6  PVTNTTTHFTLPHTLFIVSVPLPEIVKFKLSPFVSAYGVSPTTTTAYEKSLDFT 59

The following BLAST results are available for this feature:

BLAST of Cmc11g0288811 vs. NCBI nr


Match Name	E-value	Identity	Description
RHN50780.1	4.1e-04	53.70	hypothetical protein MtrunA17_Chr6g0461201 [Medicago truncatula]	[more]

BLAST of Cmc11g0288811 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Cmc11g0288811 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A396HBS0	2.0e-04	53.70	Uncharacterized protein OS=Medicago truncatula OX=3880 GN=MtrunA17_Chr6g0461201 ...	[more]

BLAST of Cmc11g0288811 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc11g0288811.1	Cmc11g0288811.1	mRNA