Cmc11g0288811 (gene) Melon (Charmono) v1.1

Overview
NameCmc11g0288811
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionUnknown protein
LocationCMiso1.1chr11: 3290442 .. 3292964 (+)
RNA-Seq ExpressionCmc11g0288811
SyntenyCmc11g0288811
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGAACTTTATTATCGAAATAATTTCCAAGAAACCCTATTTCTTTCTAAACAAAACCCCTAAACTGTCTATTGTTAGAGGGTCAGTTGTAAGCCCAAATCCTAAAGGAAAAAGCGGATTGTAATTCTCATCCCCATAGTTCATCGGAAGTTGATCCGCAGTCTTCAACCACGTCCTCCCTAACTTTCCGGTGAACCCATATTCTCCGTGTAGCACGTCCGTCACGCCCTCCCCTTCCGTTCCCGGCAGCCACGCCACCACCAGCGCGTCCAACTGTGACATGTATTGCTGGCGGCCGGAGACGATGACAACGATGCACTTAACTCAGTTGCACACGTTCTGGATCGTGTCCGAGCCTCCTTCGGCGATCGTTAGGTTCAGGTTTTCGCCTTTGGACTCGGCGGACGGCGTTTCTCCTACAATGAATATTGCGTACGAGAAGTTGTTCGCCTTGACGTAATCGGTTGTTGGATTTACGTTGTAGATGACCTCCGTGTTTGGATCAACGGTTTTCTTCACTGCCTCGAGAATGGTGGTTCCGGTTGTGAGGTTGTTGCCTCTGAGTCCTTGCCGGGTGATTGTCCGGCCGCTGCATTGGTAACCTAGATTGTTGGCGTGAGTTCCGGCTACCGAGATCTTCGGTGCTTTCTTTGACAGAGGAAGAACTGGTTCGTCAGCATTTTCGACATTCTTCAATAGAACAAGTGATTTCCTCACTGCTTCTGTTGCCAAATCTTTGTGTTCCTGTTCAGTGTTCAATTGAATTGGTATAACATTTCAATTTAAACTACATTTCTTTGTCTTTTCAGATCAACTAACCTGGCTTCCAAGCTCATTTACAGATCTGTCATCCGCCAATGGATTCTCAAACAGGTCCATCATAACCTCGACTCTCAAAATCCTTCTCACAGCGTCGTTGATTCGGGACATCGGAATGGCGTTCTTAACGACAAGGTAGGTAAGGCCATCGATGAACTCGGTGTATTTTTTGGAAAGTTATTGTAATTAAATGCAAGGTGGAAAGATTTGAATCCGGGTCCTCTGATCCACAGGTAGATACAGGTCCAGTTGAGCTTAGCTCAACTTGGCAACTCAATGTAATTTTCAGGAACCATAATCTAAAACACGACAATAAAACTAGTTTTATAAGATGTATAGATGCTATGTTGATTATCTTACCATGTCTATTCCATCTTGAACTCCAGAGAGGATTGAGAATGTGTAGTTTGAATGAGCTGGGTCTATGATCTTATCAATACCTTCTCAATCGGAGATTACTAAACCCTGCAATAGTTACGTGTGTTCAAATTTAGGGGACTTTCATTGTATAGGCTTATTATCCATGAGGATCTAGTGCCAATACATACCCTGAAGTTTAGACTGTTCTTAAGGAAATCAACGACGAGTCCATGGTTTGAATGCATTTTCGCACCGTTCCCAATCTTGGATCTCTACAGACCTGAAATGAAAATGCTCATAGTTCTATTTGAATTAGACAAGTTTATATAAAGAAAGAGAAATGAATTTTAGAAAACATACTGCTATGCATGGAGCAAAGATATAATCAATCCCAGTTCCTCTAACTTCTTTACCAGTAGCAGCACCAATCCTTCTTAAAAGTTCAGGTTCCCTGTCACATGAGAAAACTATTTAGCCACCAATAACTCCATATCGATGGCATCGGCAGTTCGTAAAAACGAAGTTTAGATCCTCCTCTCATGTATTTTCACCTGGTTACACCAACCGAGATTGTGGGGGAAGACGGTAGCATTGTAGACACCGTTGTGACCATGGACAGCATCAATACCGTACATTATTGGAATTCCAAGCCTACTTGATAATGTGGCCTGTTGGAATGAATTCACCATGGCAATCCACTCCTGTGCAGTAGCCTTTAGAGATGGGGTACTGCCTCCGCTGCTAAGCACACTGCCAATGGAGTAATCTCTTATGATTTCCGGTGTGATGGCCGAAGAATCCAACTGTGCCATCTGCCCAACCTTATCTGCTAGAGTCATTCTATCCATCAGGTCCTTGATCCGGATGTTAAGCGGCTGTATAGGGTCCTTATACATGACATAGTCTTCATCAACAGCCACCAAAGCTGCCCAGCAACAGAGTAAAACCACCTGATCACCTTCATCTTCTTCTTGGTGAATGGAACCTTGCAGAAATTGAGTTCAGATCTATCTTTAGGTTGATTATGCCTTTTTTATTTCATATGGTCAAGTTGGTAGTCCTTAAATTTTTCTTTCTCCTCCATTTTAGGTATAACCTACGACGGGTTTTGAAATACCAATTCTCAAAACCCGTTGTAGGTTATCTTCTCGGAGAAAGATTTTTAACTTAATTGCTACTTTGTTTTGGATTTGCTGTTGGAATGAAAGAACCTCTTGATTTGCCTCAGAAATATTTCCATTTTGAAAAACAAATGGGTGATGAAATCATTATATGCTGATTGGCTGGTTGAGTATTGGTTTAATCTTTATTGTTTTGGCTTGTTAAAAGAATTGCAGCAATTTTCT

mRNA sequence

TGAACTTTATTATCGAAATAATTTCCAAGAAACCCTATTTCTTTCTAAACAAAACCCCTAAACTGTCTATTGTTAGAGGGTCAGTTGTAAGCCCAAATCCTAAAGGAAAAAGCGGATTGTAATTCTCATCCCCATAGTTCATCGGAAGTTGATCCGCAGTCTTCAACCACGTCCTCCCTAACTTTCCGGTGAACCCATATTCTCCGTGTAGCACGTCCGTCACGCCCTCCCCTTCCGTTCCCGGCAGCCACGCCACCACCAGCGCGTCCAACTGTGACATGTATTGCTGGCGGCCGGAGACGATGACAACGATGCACTTAACTCAGTTGCACACGTTCTGGATCGTGTCCGAGCCTCCTTCGGCGATCGTTAGGTTCAGGTTTTCGCCTTTGGACTCGGCGGACGGCGTTTCTCCTACAATGAATATTGCGTACGAGAAGTTGTTCGCCTTGACGTAATCGGTTGTTGGATTTACGTTGTAGATGACCTCCGTGTTTGGATCAACGGTTTTCTTCACTGCCTCGAGAATGGTGGTTCCGGTTGTGAGGTTGTTGCCTCTGAGTCCTTGCCGGGTGATTGTCCGGCCGCTGCATTGGTAACCTAGATTGTTGGCGTGAGTTCCGGCTACCGAGATCTTCGGTGCTTTCTTTGACAGAGGAAGAACTGATCAACTAACCTGGCTTCCAAGCTCATTTACAGATCTGTCATCCGCCAATGGATTCTCAAACAGGTCCATCATAACCTCGACTCTCAAAATCCTTCTCACAGCGTCGTTGATTCGGGACATCGGAATGGCGTTCTTAACGACAAGGTAGGTAAGGCCATCGATGAACTCGGTGTATTTTTTGGAAAGTTATTGTAATTAAATGCAAGGTGGAAAGATTTGAATCCGGGTCCTCTGATCCACAGGTAGATACAGGTCCAGTTGAGCTTAGCTCAACTTGGCAACTCAATGTAATTTTCAGGAACCATAATCTAAAACACGACAATAAAACTAGTTTTATAAGATGTATAGATGCTATGTTGATTATCTTACCATGTCTATTCCATCTTGAACTCCAGAGAGGATTGAGAATGTGTAGTTTGAATGAGCTGGGTCTATGATCTTATCAATACCTTCTCAATCGGAGATTACTAAACCCTGCAATAGTTACGTGTGTTCAAATTTAGGGGACTTTCATTGTATAGGCTTATTATCCATGAGGATCTAGTGCCAATACATACCCTGAAGTTTAGACTGTTCTTAAGGAAATCAACGACGAGTCCATGGTTTGAATGCATTTTCGCACCGTTCCCAATCTTGGATCTCTACAGACCTGAAATGAAAATGCTCATAGTTCTATTTGAATTAGACAAGTTTATATAAAGAAAGAGAAATGAATTTTAGAAAACATACTGCTATGCATGGAGCAAAGATATAATCAATCCCAGTTCCTCTAACTTCTTTACCAGTAGCAGCACCAATCCTTCTTAAAAGTTCAGGTTCCCTGTCACATGAGAAAACTATTTAGCCACCAATAACTCCATATCGATGGCATCGGCAGTTCGTAAAAACGAAGTTTAGATCCTCCTCTCATGTATTTTCACCTGGTTACACCAACCGAGATTGTGGGGGAAGACGGTAGCATTGTAGACACCGTTGTGACCATGGACAGCATCAATACCGTACATTATTGGAATTCCAAGCCTACTTGATAATGTGGCCTGTTGGAATGAATTCACCATGGCAATCCACTCCTGTGCAGTAGCCTTTAGAGATGGGGTACTGCCTCCGCTGCTAAGCACACTGCCAATGGAGTAATCTCTTATGATTTCCGGTGTGATGGCCGAAGAATCCAACTGTGCCATCTGCCCAACCTTATCTGCTAGAGTCATTCTATCCATCAGGTCCTTGATCCGGATGTTAAGCGGCTGTATAGGGTCCTTATACATGACATAGTCTTCATCAACAGCCACCAAAGCTGCCCAGCAACAGAGTAAAACCACCTGATCACCTTCATCTTCTTCTTGGTGAATGGAACCTTGCAGAAATTGAGTTCAGATCTATCTTTAGGTTGATTATGCCTTTTTTATTTCATATGGTCAAGTTGGTAGTCCTTAAATTTTTCTTTCTCCTCCATTTTAGGTATAACCTACGACGGGTTTTGAAATACCAATTCTCAAAACCCGTTGTAGGTTATCTTCTCGGAGAAAGATTTTTAACTTAATTGCTACTTTGTTTTGGATTTGCTGTTGGAATGAAAGAACCTCTTGATTTGCCTCAGAAATATTTCCATTTTGAAAAACAAATGGGTGATGAAATCATTATATGCTGATTGGCTGGTTGAGTATTGGTTTAATCTTTATTGTTTTGGCTTGTTAAAAGAATTGCAGCAATTTTCT

Coding sequence (CDS)

ATGTATTGCTGGCGGCCGGAGACGATGACAACGATGCACTTAACTCAGTTGCACACGTTCTGGATCGTGTCCGAGCCTCCTTCGGCGATCGTTAGGTTCAGGTTTTCGCCTTTGGACTCGGCGGACGGCGTTTCTCCTACAATGAATATTGCGTACGAGAAGTTGTTCGCCTTGACGTAA

Protein sequence

MYCWRPETMTTMHLTQLHTFWIVSEPPSAIVRFRFSPLDSADGVSPTMNIAYEKLFALT
Homology
[Close]
BLAST of Cmc11g0288811 vs. NCBI nr
Match: RHN50780.1 (hypothetical protein MtrunA17_Chr6g0461201 [Medicago truncatula])

HSP 1 Score: 54.3 bits (129), Expect = 4.1e-04
Identity = 29/54 (53.70%), Postives = 32/54 (59.26%), Query Frame = 0 

Query: 6  PETMTTMHLTQLHTFWIVSEPPSAIVRFRFSPLDSADGVSPTMNIAYEKLFALT 60
          P T TT H T  HT +IVS P   IV+F+ SP  SA GVSPT   AYEK    T
Sbjct: 6  PVTNTTTHFTLPHTLFIVSVPLPEIVKFKLSPFVSAYGVSPTTTTAYEKSLDFT 59

[Close]
BLAST of Cmc11g0288811 vs. ExPASy TrEMBL
Match: A0A396HBS0 (Uncharacterized protein OS=Medicago truncatula OX=3880 GN=MtrunA17_Chr6g0461201 PE=4 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 2.0e-04
Identity = 29/54 (53.70%), Postives = 32/54 (59.26%), Query Frame = 0 

Query: 6  PETMTTMHLTQLHTFWIVSEPPSAIVRFRFSPLDSADGVSPTMNIAYEKLFALT 60
          P T TT H T  HT +IVS P   IV+F+ SP  SA GVSPT   AYEK    T
Sbjct: 6  PVTNTTTHFTLPHTLFIVSVPLPEIVKFKLSPFVSAYGVSPTTTTAYEKSLDFT 59

The following BLAST results are available for this feature:
BLAST of Cmc11g0288811 vs. NCBI nr
Match NameE-valueIdentityDescription
RHN50780.14.1e-0453.70hypothetical protein MtrunA17_Chr6g0461201 [Medicago truncatula][more]
BLAST of Cmc11g0288811 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Cmc11g0288811 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A396HBS02.0e-0453.70Uncharacterized protein OS=Medicago truncatula OX=3880 GN=MtrunA17_Chr6g0461201 ... [more]
BLAST of Cmc11g0288811 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc11g0288811.1Cmc11g0288811.1mRNA