Cmc11g0288691 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc11g0288691
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Fructose-bisphosphate aldolase
Location	CMiso1.1chr11: 3230600 .. 3231611 (+)
RNA-Seq Expression	Cmc11g0288691
Synteny	Cmc11g0288691

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GCCTTATTATATATGCTCATGATTAATGCAAATTCAAGCATCTTACATGGGATTGAGAAGACCACAAACTAAACTAAAAATCATCACCAAAATGTTCATTAAGCTGCTAAGAATACACAAAAATAGTTTTTTTTTTTTTTTCTTTTTTGTTCTTTTTAAATTGCTATAAAGCATCATCATCATAAACACAATAAACACAGCAATTAGTCTCCAACTTCAACCATCATCAGCTTCTTCTTCTTTTTTCATCTTCTTGATCTATAGAAAAGCTTAGTATGTGTAGCCCTTGACAAACATTCCCTCCTTTGCTTCGTCAGACTCACCATCACCAGTGTACTTCCCAAGCTGGGCGAGGGAGTTCGACTTGGCTCGTTGAATCAGAGCATCCTGTGCGGCCTTCACATTCTCTGGTCGTCCACCCCATGTCTTCAAGCAAGTGTTTTGGAGAGCTCTAGCATATGAGAAGGACACATGCCATGGGTTTGGTGCTTGGTTCATGGCATTCAAGTTCAATGTAGCCTCTATCTCAGATTGCCCACCTGATAAAAACTGTTCCACAACCACAAAAAGCAACCCACGTTCAATTCATCAACCAAATTCTTAAATCACTCCTTCACCTAAAATTTTAAACTACACGTGACTTTCTAGATGACATACTCGTGTATCATCTTAAATCAATCCAACGTTTGAGTTGACTAGTGAAGGATAAATTTAATATTATATTATCTAAAAATAATCAACTCATAAACTATATGCTCTTGTCCCTCTTAAATCACTGATTGAGCAAAATTATCAATAGACACAACGATAATGAACGTTAAAAGTTTAAGGGATGTTGTAATGACTTGCCATGATTCCAGGAACAGCAGGAGGGATTCTTCTTTGGAGAAGAGAAAGAGTGTACTTAGCAACTGTCTCAGGGCTTGCTTTGTCTTTGCTCTCAGCTCCAGGAGTAACCATGCTTGGTTTCAAAAGAATTCCTTCAAACAAAACATTGTTCTCTGCAAGGTAG

mRNA sequence

GCCTTATTATATATGCTCATGATTAATGCAAATTCAAGCATCTTACATGGGATTGAGAAGACCACAAACTAAACTAAAAATCATCACCAAAATGTTCATTAAGCTGCTAAGAATACACAAAAATAGTTTTTTTTTTTTTTTCTTTTTTGTTCTTTTTAAATTGCTATAAAGCATCATCATCATAAACACAATAAACACAGCAATTAGTCTCCAACTTCAACCATCATCAGCTTCTTCTTCTTTTTTCATCTTCTTGATCTATAGAAAAGCTTAGTATGTGTAGCCCTTGACAAACATTCCCTCCTTTGCTTCGTCAGACTCACCATCACCAGTGTACTTCCCAAGCTGGGCGAGGGAGTTCGACTTGGCTCGTTGAATCAGAGCATCCTGTGCGGCCTTCACATTCTCTGGTCGTCCACCCCATGTCTTCAAGCAAGTGTTTTGGAGAGCTCTAGCATATGAGAAGGACACATGCCATGGGTTTGGTGCTTGGTTCATGGCATTCAAGTTCAATGTAGCCTCTATCTCAGATTGCCCACCTGATAAAAACTGTTCCACAACCACAAAAAGCAACCCACGTTCAATTCATCAACCAAATTCTTAAATCACTCCTTCACCTAAAATTTTAAACTACACGTGACTTTCTAGATGACATACTCGTGTATCATCTTAAATCAATCCAACGTTTGAGTTGACTAGTGAAGGATAAATTTAATATTATATTATCTAAAAATAATCAACTCATAAACTATATGCTCTTGTCCCTCTTAAATCACTGATTGAGCAAAATTATCAATAGACACAACGATAATGAACGTTAAAAGTTTAAGGGATGTTGTAATGACTTGCCATGATTCCAGGAACAGCAGGAGGGATTCTTCTTTGGAGAAGAGAAAGAGTGTACTTAGCAACTGTCTCAGGGCTTGCTTTGTCTTTGCTCTCAGCTCCAGGAGTAACCATGCTTGGTTTCAAAAGAATTCCTTCAAACAAAACATTGTTCTCTGCAAGGTAG

Coding sequence (CDS)

ATGATTCCAGGAACAGCAGGAGGGATTCTTCTTTGGAGAAGAGAAAGAGTGTACTTAGCAACTGTCTCAGGGCTTGCTTTGTCTTTGCTCTCAGCTCCAGGAGTAACCATGCTTGGTTTCAAAAGAATTCCTTCAAACAAAACATTGTTCTCTGCAAGGTAG

Protein sequence

MIPGTAGGILLWRRERVYLATVSGLALSLLSAPGVTMLGFKRIPSNKTLFSAR

Homology

[Close]

BLAST of Cmc11g0288691 vs. NCBI nr
Match: KAG9142510.1 (hypothetical protein Leryth_017011 [Lithospermum erythrorhizon])

HSP 1 Score: 74.7 bits (182), Expect = 2.7e-10
Identity = 40/53 (75.47%), Postives = 43/53 (81.13%), Query Frame = 0


Query: 1  MIPGTAGGILLWRRERVYLATVSGLALSLLSAPGVTMLGFKRIPSNKTLFSAR 54
          MIP TAG IL+ R  RVY AT SG+ALSL S PGVTMLGF+RIPSN TLFSAR
Sbjct: 17 MIPETAGEILVLRSFRVYAATCSGVALSLHSVPGVTMLGFRRIPSNMTLFSAR 69

[Close]

BLAST of Cmc11g0288691 vs. NCBI nr
Match: CAA7403712.1 (unnamed protein product [Spirodela intermedia])

HSP 1 Score: 68.9 bits (167), Expect = 1.5e-08
Identity = 37/53 (69.81%), Postives = 41/53 (77.36%), Query Frame = 0


Query: 1   MIPGTAGGILLWRRERVYLATVSGLALSLLSAPGVTMLGFKRIPSNKTLFSAR 54
           MIPGTAGG+   RR RVY AT SG+A SL SAPGVTMLG +R+PS  TLF AR
Sbjct: 101 MIPGTAGGMRRRRRLRVYSATFSGVARSLHSAPGVTMLGLRRMPSKSTLFWAR 153

[Close]

BLAST of Cmc11g0288691 vs. NCBI nr
Match: CAA2627648.1 (unnamed protein product [Spirodela intermedia])

HSP 1 Score: 67.8 bits (164), Expect = 3.2e-08
Identity = 36/53 (67.92%), Postives = 41/53 (77.36%), Query Frame = 0


Query: 1   MIPGTAGGILLWRRERVYLATVSGLALSLLSAPGVTMLGFKRIPSNKTLFSAR 54
           M+PGTAGG+   RR RVY AT SG+A SL SAPGVTMLG +R+PS  TLF AR
Sbjct: 101 MMPGTAGGMRRRRRLRVYSATFSGVARSLHSAPGVTMLGLRRMPSKSTLFWAR 153

[Close]

BLAST of Cmc11g0288691 vs. ExPASy TrEMBL
Match: A0A0A9LZT9 (Fructose-bisphosphate aldolase OS=Arundo donax OX=35708 PE=4 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.1e-09
Identity = 39/53 (73.58%), Postives = 39/53 (73.58%), Query Frame = 0


Query: 1  MIPGTAGGILLWRRERVYLATVSGLALSLLSAPGVTMLGFKRIPSNKTLFSAR 54
          MIPGTAGG LL     VY A  SG A SL SAPGVTMLGF RIPSNKTLF AR
Sbjct: 1  MIPGTAGGTLLRSIVNVYFAMASGEAFSLCSAPGVTMLGFSRIPSNKTLFWAR 53

[Close]

BLAST of Cmc11g0288691 vs. ExPASy TrEMBL
Match: A0A7I8L1T6 (Hypothetical protein OS=Spirodela intermedia OX=51605 GN=SI8410_10014390 PE=4 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 7.1e-09
Identity = 37/53 (69.81%), Postives = 41/53 (77.36%), Query Frame = 0


Query: 1   MIPGTAGGILLWRRERVYLATVSGLALSLLSAPGVTMLGFKRIPSNKTLFSAR 54
           MIPGTAGG+   RR RVY AT SG+A SL SAPGVTMLG +R+PS  TLF AR
Sbjct: 101 MIPGTAGGMRRRRRLRVYSATFSGVARSLHSAPGVTMLGLRRMPSKSTLFWAR 153

[Close]

BLAST of Cmc11g0288691 vs. ExPASy TrEMBL
Match: A0A7I8J9L0 (Hypothetical protein OS=Spirodela intermedia OX=51605 GN=SI7747_10013301 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.6e-08
Identity = 36/53 (67.92%), Postives = 41/53 (77.36%), Query Frame = 0


Query: 1   MIPGTAGGILLWRRERVYLATVSGLALSLLSAPGVTMLGFKRIPSNKTLFSAR 54
           M+PGTAGG+   RR RVY AT SG+A SL SAPGVTMLG +R+PS  TLF AR
Sbjct: 101 MMPGTAGGMRRRRRLRVYSATFSGVARSLHSAPGVTMLGLRRMPSKSTLFWAR 153

[Close]

BLAST of Cmc11g0288691 vs. ExPASy TrEMBL
Match: A0A7C9DYN2 (Uncharacterized protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 1.1e-04
Identity = 29/53 (54.72%), Postives = 36/53 (67.92%), Query Frame = 0


Query: 1  MIPGTAGGILLWRRERVYLATVSGLALSLLSAPGVTMLGFKRIPSNKTLFSAR 54
          M+PGTAGG +L +   VY A  SG A  L S PGVTMLGF ++PS +T +S R
Sbjct: 19 MMPGTAGGTVLCKARTVYSAMTSG-ATFLFSDPGVTMLGFNKVPSRRTWWSLR 70

The following BLAST results are available for this feature:

BLAST of Cmc11g0288691 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG9142510.1	2.7e-10	75.47	hypothetical protein Leryth_017011 [Lithospermum erythrorhizon]	[more]
CAA7403712.1	1.5e-08	69.81	unnamed protein product [Spirodela intermedia]	[more]
CAA2627648.1	3.2e-08	67.92	unnamed protein product [Spirodela intermedia]	[more]

BLAST of Cmc11g0288691 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Cmc11g0288691 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A9LZT9	1.1e-09	73.58	Fructose-bisphosphate aldolase OS=Arundo donax OX=35708 PE=4 SV=1	[more]
A0A7I8L1T6	7.1e-09	69.81	Hypothetical protein OS=Spirodela intermedia OX=51605 GN=SI8410_10014390 PE=4 SV...	[more]
A0A7I8J9L0	1.6e-08	67.92	Hypothetical protein OS=Spirodela intermedia OX=51605 GN=SI7747_10013301 PE=4 SV...	[more]
A0A7C9DYN2	1.1e-04	54.72	Uncharacterized protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1	[more]

BLAST of Cmc11g0288691 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc11g0288691.1	Cmc11g0288691.1	mRNA