Cmc11g0288671 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc11g0288671
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr11: 3165210 .. 3167256 (+)
RNA-Seq Expression	Cmc11g0288671
Synteny	Cmc11g0288671

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTCCAAGCGAGCTTAAAGAATTGAAGATGCAGTTACAAGAACTAGTTGACAAGGGATACATTAGGCCTAGTGTTTCGCCATGGGGAGCACCAGTGCTATTTGTGAAAAAGAAAGATGGTACCCTCAGATTATGTATTGACTATAGACAGTTAAACAAGGTTACAATACGTAACAAGTATCCTTTACCATGCATCGATGACTTATTTGATCAATTGAGGGGAGCAGCGTTGTTCTCTAAGATTGACTTAAGGTCAGGATACCACCAGTTGAAGGTTAGAGAATCAGATATTGCTAAGACATCATTTAGAATGAGGTATGGGCATTATGAGTTTCAAGTTATGCCATTCGGTTTAAAGAATGCGCCAGCGGTTTTCATGGATCTCATAAACAGGATCTTCCATCAGTATTTAGATCAATTTGTGATCGTGTTCATTGATGATATATTAGTTTACTCGGTTGACAGAGAAGGCCATGAGGAACATCTGAGGATTGTTCTACAGACTCTACATGATAAACAATTGTACGCTAAGTTTAGTAAATGTGAGTTCTGGTTGGAACAAGTAGTATTTTTGGGGCATGTAGTTTCAGCAAAAGGAGTTAGTGTCGATCCATAAAAAGTAGAAGCGGTTGTCAATTGGGAAAGACCAACTAGTGCGATAGAAGTACATAGTTTCCTGGGTTTGGCAGGATACTATAGGCGTTTTATTGAGAATTTCTCACGATTGGCATTGCCTTTAACCGCTTTGACAAGGAAGAATGCTAAGTTTGAGTGGTCAGAAAAATGCGAGCAAAGTTTTCAGGAATTGAAGAAAAGACTAGTCACAGCACCTATTCTGGCACTTCCTATAACAGGGAATGACTATGTGATTTATTGTGATGCTTCAAGGCTAGGATTAGGTTTTGTGCTTATGCAAGATGGGAATGTAATAGCTTATGCTTCAAGGCCGTTGAAGGAGCATGAGTGTAATTACCCTACCCATGATCTTGAGCTAGCAGCAGTTGTTTTAGCACTAAAAATCTGGAGACACTATTTGTTCGGGGAAAAGTGCCATATTTTCACAGATCATAAAAGTCTGAAGTATATTTTTGATCAGAAAGAGATAAATCTGAGACAAAGGCGATGGCTAGAACTGATTAAAGATTATGATTGTACTATAGAGTATCATCCAGGTAAGGCTAACTTAGTAGCAGATGCATTAAGTAGGAAGTTAAGACTTTCGAAGAGTGCCTTATATGGTATTCAAGTAGCTTTGTTGAATGAGTTAAGAGGCAGTAGTAACTACAGAGGATTCAGGAAGTCTCTTAGCTCAATTTCAGGTTCGGTCTTCTCTAGTAACTAAGATTGTAAGAAGACAGTCAGAAGACAGTAATTTACAGAAGAAGCTTGAGAAATCCAAGAAAGGCCTAGAGGTGGAGTTTGAGCTGAGAACAGATGGAGCCATTGTTAAACAAGGAAGATTATGTGTTCCGAATATCAGTGAGTTTAAGAATGCTATTCTAAAAGAAGCTCATAGTTTAGCTTACGCTATGCATCCAGGTAGCACCAAGATGTACAGAACTTTAAAGAAGACTTATTGGTGGCCTGGAATGAAGCAAGAGATAGTTGAATATGTTGATAGATGTTTGATTTGTCAACAAGTTAAACCAGTAAGACAGAGGCCAGGAGGATTTCTTAATCCTTTTCCAGTGCCAAAGTGGAAATGGGAGCATATTACTATGGATTTTCTATTTGGATTACTTCGTACATCCAGTGGACATGATGGTATATGGGTAATAATAGACAGGCGCACCAAGACGACACAATTTATACCGATTAAAACGACATCTACGTTAGACCAGCTAGCTAGATTATATGTTGATAAGATTGTGAGTGAGTATGGAGTACCAGTGTCCATAGTTTCAGATAGGGATCCGAGGTTTACTTCTAAATTTTGGCCTAGTTTACAGAAAGCAATGGGAATAGGGCTAAAGTTTAGTACATCATTTCATCCCCAAACAGATGGTCAGTCCGAGAGGACCATCCAAACTTTAGAGGACATATAG

mRNA sequence

ATGGCTCCAAGCGAGCTTAAAGAATTGAAGATGCAGTTACAAGAACTAGTTGACAAGGGATACATTAGGCCTAGTGTTTCGCCATGGGGAGCACCAGTGCTATTTGTGAAAAAGAAAGATGGTACCCTCAGATTATGTATTGACTATAGACAGTTAAACAAGGTTACAATACGTAACAAGTATCCTTTACCATGCATCGATGACTTATTTGATCAATTGAGGGGAGCAGCGTTGTTCTCTAAGATTGACTTAAGGTCAGGATACCACCAGTTGAAGGTTAGAGAATCAGATATTGCTAAGACATCATTTAGAATGAGGTATGGGCATTATGAGTTTCAAGTTATGCCATTCGGTTTAAAGAATGCGCCAGCGGTTTTCATGGATCTCATAAACAGGATCTTCCATCAGTATTTAGATCAATTTGTGATCGTGTTCATTGATGATATATTAGTTTACTCGGTTGACAGAGAAGGCCATGAGGAACATCTGAGGATTGTTCTACAGACTCTACATGATAAACAATTGTACGCTAAGTTTAGTAAATCGGTTGTCAATTGGGAAAGACCAACTAGTGCGATAGAAGTACATAGTTTCCTGGGTTTGGCAGGATACTATAGGCGTTTTATTGAGAATTTCTCACGATTGGCATTGCCTTTAACCGCTTTGACAAGGAAGAATGCTAAGTTTGAGTGGTCAGAAAAATGCGAGCAAAGTTTTCAGGAATTGAAGAAAAGACTAGTCACAGCACCTATTCTGGCACTTCCTATAACAGGGAATGACTATGTGATTTATTGTGATGCTTCAAGGCTAGGATTAGGTTTTGTGCTTATGCAAGATGGGAATGTAATAGCTTATGCTTCAAGGCCGTTGAAGGAGCATGAGTGTAATTACCCTACCCATGATCTTGAGCTAGCAGCAGTTGTTTTAGCACTAAAAATCTGGAGACACTATTTGTTCGGGGAAAAGTGCCATATTTTCACAGATCATAAAAGTCTGAAGTATATTTTTGATCAGAAAGAGATAAATCTGAGACAAAGGCGATGGCTAGAACTGATTAAAGATTATGATTGTACTATAGAGTATCATCCAGGTAAGGCTAACTTAGTAGCAGATGCATTAAGTAGGAAACAGTCAGAAGACAGTAATTTACAGAAGAAGCTTGAGAAATCCAAGAAAGGCCTAGAGGTGGAGTTTGAGCTGAGAACAGATGGAGCCATTGTTAAACAAGGAAGATTATGTGTTCCGAATATCAGTGAGTTTAAGAATGCTATTCTAAAAGAAGCTCATAGTTTAGCTTACGCTATGCATCCAGGTAGCACCAAGATGTACAGAACTTTAAAGAAGACTTATTGGTGGCCTGGAATGAAGCAAGAGATAGTTGAATATGTTGATAGATGTTTGATTTGTCAACAAGTTAAACCAGTAAGACAGAGGCCAGGAGGATTTCTTAATCCTTTTCCAGTGCCAAAGTGGAAATGGGAGCATATTACTATGGATTTTCTATTTGGATTACTTCGTACATCCAGTGGACATGATGGTATATGGGTAATAATAGACAGGCGCACCAAGACGACACAATTTATACCGATTAAAACGACATCTACGTTAGACCAGCTAGCTAGATTATATGTTGATAAGATTGTGAGTGAGTATGGAGTACCAGTGTCCATAGTTTCAGATAGGGATCCGAGGTTTACTTCTAAATTTTGGCCTAGTTTACAGAAAGCAATGGGAATAGGGCTAAAGTTTAGTACATCATTTCATCCCCAAACAGATGGTCAGTCCGAGAGGACCATCCAAACTTTAGAGGACATATAG

Coding sequence (CDS)

ATGGCTCCAAGCGAGCTTAAAGAATTGAAGATGCAGTTACAAGAACTAGTTGACAAGGGATACATTAGGCCTAGTGTTTCGCCATGGGGAGCACCAGTGCTATTTGTGAAAAAGAAAGATGGTACCCTCAGATTATGTATTGACTATAGACAGTTAAACAAGGTTACAATACGTAACAAGTATCCTTTACCATGCATCGATGACTTATTTGATCAATTGAGGGGAGCAGCGTTGTTCTCTAAGATTGACTTAAGGTCAGGATACCACCAGTTGAAGGTTAGAGAATCAGATATTGCTAAGACATCATTTAGAATGAGGTATGGGCATTATGAGTTTCAAGTTATGCCATTCGGTTTAAAGAATGCGCCAGCGGTTTTCATGGATCTCATAAACAGGATCTTCCATCAGTATTTAGATCAATTTGTGATCGTGTTCATTGATGATATATTAGTTTACTCGGTTGACAGAGAAGGCCATGAGGAACATCTGAGGATTGTTCTACAGACTCTACATGATAAACAATTGTACGCTAAGTTTAGTAAATCGGTTGTCAATTGGGAAAGACCAACTAGTGCGATAGAAGTACATAGTTTCCTGGGTTTGGCAGGATACTATAGGCGTTTTATTGAGAATTTCTCACGATTGGCATTGCCTTTAACCGCTTTGACAAGGAAGAATGCTAAGTTTGAGTGGTCAGAAAAATGCGAGCAAAGTTTTCAGGAATTGAAGAAAAGACTAGTCACAGCACCTATTCTGGCACTTCCTATAACAGGGAATGACTATGTGATTTATTGTGATGCTTCAAGGCTAGGATTAGGTTTTGTGCTTATGCAAGATGGGAATGTAATAGCTTATGCTTCAAGGCCGTTGAAGGAGCATGAGTGTAATTACCCTACCCATGATCTTGAGCTAGCAGCAGTTGTTTTAGCACTAAAAATCTGGAGACACTATTTGTTCGGGGAAAAGTGCCATATTTTCACAGATCATAAAAGTCTGAAGTATATTTTTGATCAGAAAGAGATAAATCTGAGACAAAGGCGATGGCTAGAACTGATTAAAGATTATGATTGTACTATAGAGTATCATCCAGGTAAGGCTAACTTAGTAGCAGATGCATTAAGTAGGAAACAGTCAGAAGACAGTAATTTACAGAAGAAGCTTGAGAAATCCAAGAAAGGCCTAGAGGTGGAGTTTGAGCTGAGAACAGATGGAGCCATTGTTAAACAAGGAAGATTATGTGTTCCGAATATCAGTGAGTTTAAGAATGCTATTCTAAAAGAAGCTCATAGTTTAGCTTACGCTATGCATCCAGGTAGCACCAAGATGTACAGAACTTTAAAGAAGACTTATTGGTGGCCTGGAATGAAGCAAGAGATAGTTGAATATGTTGATAGATGTTTGATTTGTCAACAAGTTAAACCAGTAAGACAGAGGCCAGGAGGATTTCTTAATCCTTTTCCAGTGCCAAAGTGGAAATGGGAGCATATTACTATGGATTTTCTATTTGGATTACTTCGTACATCCAGTGGACATGATGGTATATGGGTAATAATAGACAGGCGCACCAAGACGACACAATTTATACCGATTAAAACGACATCTACGTTAGACCAGCTAGCTAGATTATATGTTGATAAGATTGTGAGTGAGTATGGAGTACCAGTGTCCATAGTTTCAGATAGGGATCCGAGGTTTACTTCTAAATTTTGGCCTAGTTTACAGAAAGCAATGGGAATAGGGCTAAAGTTTAGTACATCATTTCATCCCCAAACAGATGGTCAGTCCGAGAGGACCATCCAAACTTTAGAGGACATATAG

Protein sequence

MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPCIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKTSFRMRYGHYEFQVMPFGLKNAPAVFMDLINRIFHQYLDQFVIVFIDDILVYSVDREGHEEHLRIVLQTLHDKQLYAKFSKSVVNWERPTSAIEVHSFLGLAGYYRRFIENFSRLALPLTALTRKNAKFEWSEKCEQSFQELKKRLVTAPILALPITGNDYVIYCDASRLGLGFVLMQDGNVIAYASRPLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKEINLRQRRWLELIKDYDCTIEYHPGKANLVADALSRKQSEDSNLQKKLEKSKKGLEVEFELRTDGAIVKQGRLCVPNISEFKNAILKEAHSLAYAMHPGSTKMYRTLKKTYWWPGMKQEIVEYVDRCLICQQVKPVRQRPGGFLNPFPVPKWKWEHITMDFLFGLLRTSSGHDGIWVIIDRRTKTTQFIPIKTTSTLDQLARLYVDKIVSEYGVPVSIVSDRDPRFTSKFWPSLQKAMGIGLKFSTSFHPQTDGQSERTIQTLEDI

Homology

[Close]

BLAST of Cmc11g0288671 vs. NCBI nr
Match: KAA0035455.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >KAA0046782.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >TYK01987.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >TYK03719.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >TYK25877.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 1130.2 bits (2922), Expect = 0.0e+00
Identity = 566/684 (82.75%), Postives = 583/684 (85.23%), Query Frame = 0


Query: 1    MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNK 60
            MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNK
Sbjct: 665  MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNK 724

Query: 61   YPLPCIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKTSFRMRYGHYEFQVMPFGLK 120
            YPLP IDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKT+FR RYGHYEF+VMPFGL 
Sbjct: 725  YPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLT 784

Query: 121  NAPAVFMDLINRIFHQYLDQFVIVFIDDILVYSVDREGHEEHLRIVLQTLHDKQLYAKFS 180
            NAPAVFMDL+NRIFH+YLDQFVIVFIDDILVYSVDRE HEEHLRIVLQTL +KQLYAKFS
Sbjct: 785  NAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFS 844

Query: 181  K----------------------------SVVNWERPTSAIEVHSFLGLAGYYRRFIENF 240
            K                            +VVNWERP SA EV SFLGLAGYYRRFIE+F
Sbjct: 845  KCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDF 904

Query: 241  SRLALPLTALTRKNAKFEWSEKCEQSFQELKKRLVTAPILALPITGNDYVIYCDASRLGL 300
            SRLALPLTALTRKN KFEWS+KCEQSFQELKKRLVTAPILALP+TG DYVIYCDASRLGL
Sbjct: 905  SRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL 964

Query: 301  GFVLMQDGNVIAYASRPLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSL 360
            G VLMQDGNVIAYASR LKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSL
Sbjct: 965  GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSL 1024

Query: 361  KYIFDQKEINLRQRRWLELIKDYDCTIEYHPGKANLVADALSRK---------------- 420
            KYIFDQKE+NLRQRRWLELIKDYDCTIEYHPGKAN+VADALSRK                
Sbjct: 1025 KYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCGIRVALL 1084

Query: 421  -----------------------------------QSEDSNLQKKLEKSKKGLEVEFELR 480
                                               QSEDSNLQKK EKSKKGLEVEFELR
Sbjct: 1085 NELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELR 1144

Query: 481  TDGAIVKQGRLCVPNISEFKNAILKEAHSLAYAMHPGSTKMYRTLKKTYWWPGMKQEIVE 540
            TDGAIVKQGRLCVPNISE KNAIL+EAHS AYAMHPGSTKMYRTLKKTYWW GMKQEI E
Sbjct: 1145 TDGAIVKQGRLCVPNISELKNAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAE 1204

Query: 541  YVDRCLICQQVKPVRQRPGGFLNPFPVPKWKWEHITMDFLFGLLRTSSGHDGIWVIIDRR 600
            YVDRCLICQQVKPVRQRPGGFLNP PVP+WKWEHITMDFLFGL RTSSGHDGIWVI+DR 
Sbjct: 1205 YVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRL 1264

Query: 601  TKTTQFIPIKTTSTLDQLARLYVDKIVSEYGVPVSIVSDRDPRFTSKFWPSLQKAMGIGL 606
            TKTT+FIPIK TSTLDQLARLYVDKIVS+YGVPVSIVSDRDPRFTSKFWPSLQKAMG GL
Sbjct: 1265 TKTTRFIPIKMTSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGL 1324

[Close]

BLAST of Cmc11g0288671 vs. NCBI nr
Match: KAA0037582.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 1130.2 bits (2922), Expect = 0.0e+00
Identity = 566/684 (82.75%), Postives = 583/684 (85.23%), Query Frame = 0


Query: 1   MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNK 60
           MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNK
Sbjct: 249 MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNK 308

Query: 61  YPLPCIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKTSFRMRYGHYEFQVMPFGLK 120
           YPLP IDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKT+FR RYGHYEF+VMPFGL 
Sbjct: 309 YPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLT 368

Query: 121 NAPAVFMDLINRIFHQYLDQFVIVFIDDILVYSVDREGHEEHLRIVLQTLHDKQLYAKFS 180
           NAPAVFMDL+NRIFH+YLDQFVIVFIDDILVYSVDRE HEEHLRIVLQTL +KQLYAKFS
Sbjct: 369 NAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFS 428

Query: 181 K----------------------------SVVNWERPTSAIEVHSFLGLAGYYRRFIENF 240
           K                            +VVNWERP SA EV SFLGLAGYYRRFIE+F
Sbjct: 429 KCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDF 488

Query: 241 SRLALPLTALTRKNAKFEWSEKCEQSFQELKKRLVTAPILALPITGNDYVIYCDASRLGL 300
           SRLALPLTALTRKN KFEWS+KCEQSFQELKKRLVTAPILALP+TG DYVIYCDASRLGL
Sbjct: 489 SRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL 548

Query: 301 GFVLMQDGNVIAYASRPLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSL 360
           G VLMQDGNVIAYASR LKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSL
Sbjct: 549 GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSL 608

Query: 361 KYIFDQKEINLRQRRWLELIKDYDCTIEYHPGKANLVADALSRK---------------- 420
           KYIFDQKE+NLRQRRWLELIKDYDCTIEYHPGKAN+VADALSRK                
Sbjct: 609 KYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCGIRVALL 668

Query: 421 -----------------------------------QSEDSNLQKKLEKSKKGLEVEFELR 480
                                              QSEDSNLQKK EKSKKGLEVEFELR
Sbjct: 669 NELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELR 728

Query: 481 TDGAIVKQGRLCVPNISEFKNAILKEAHSLAYAMHPGSTKMYRTLKKTYWWPGMKQEIVE 540
           TDGAIVKQGRLCVPNISE KNAIL+EAHS AYAMHPGSTKMYRTLKKTYWW GMKQEI E
Sbjct: 729 TDGAIVKQGRLCVPNISELKNAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAE 788

Query: 541 YVDRCLICQQVKPVRQRPGGFLNPFPVPKWKWEHITMDFLFGLLRTSSGHDGIWVIIDRR 600
           YVDRCLICQQVKPVRQRPGGFLNP PVP+WKWEHITMDFLFGL RTSSGHDGIWVI+DR 
Sbjct: 789 YVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRL 848

Query: 601 TKTTQFIPIKTTSTLDQLARLYVDKIVSEYGVPVSIVSDRDPRFTSKFWPSLQKAMGIGL 606
           TKTT+FIPIK TSTLDQLARLYVDKIVS+YGVPVSIVSDRDPRFTSKFWPSLQKAMG GL
Sbjct: 849 TKTTRFIPIKMTSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGL 908

[Close]

BLAST of Cmc11g0288671 vs. NCBI nr
Match: KAA0056684.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 1130.2 bits (2922), Expect = 0.0e+00
Identity = 566/684 (82.75%), Postives = 583/684 (85.23%), Query Frame = 0


Query: 1    MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNK 60
            MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNK
Sbjct: 876  MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNK 935

Query: 61   YPLPCIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKTSFRMRYGHYEFQVMPFGLK 120
            YPLP IDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKT+FR RYGHYEF+VMPFGL 
Sbjct: 936  YPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLT 995

Query: 121  NAPAVFMDLINRIFHQYLDQFVIVFIDDILVYSVDREGHEEHLRIVLQTLHDKQLYAKFS 180
            NAPAVFMDL+NRIFH+YLDQFVIVFIDDILVYSVDRE HEEHLRIVLQTL +KQLYAKFS
Sbjct: 996  NAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFS 1055

Query: 181  K----------------------------SVVNWERPTSAIEVHSFLGLAGYYRRFIENF 240
            K                            +VVNWERP SA EV SFLGLAGYYRRFIE+F
Sbjct: 1056 KCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDF 1115

Query: 241  SRLALPLTALTRKNAKFEWSEKCEQSFQELKKRLVTAPILALPITGNDYVIYCDASRLGL 300
            SRLALPLTALTRKN KFEWS+KCEQSFQELKKRLVTAPILALP+TG DYVIYCDASRLGL
Sbjct: 1116 SRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL 1175

Query: 301  GFVLMQDGNVIAYASRPLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSL 360
            G VLMQDGNVIAYASR LKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSL
Sbjct: 1176 GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSL 1235

Query: 361  KYIFDQKEINLRQRRWLELIKDYDCTIEYHPGKANLVADALSRK---------------- 420
            KYIFDQKE+NLRQRRWLELIKDYDCTIEYHPGKAN+VADALSRK                
Sbjct: 1236 KYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCGIRVALL 1295

Query: 421  -----------------------------------QSEDSNLQKKLEKSKKGLEVEFELR 480
                                               QSEDSNLQKK EKSKKGLEVEFELR
Sbjct: 1296 NELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELR 1355

Query: 481  TDGAIVKQGRLCVPNISEFKNAILKEAHSLAYAMHPGSTKMYRTLKKTYWWPGMKQEIVE 540
            TDGAIVKQGRLCVPNISE KNAIL+EAHS AYAMHPGSTKMYRTLKKTYWW GMKQEI E
Sbjct: 1356 TDGAIVKQGRLCVPNISELKNAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAE 1415

Query: 541  YVDRCLICQQVKPVRQRPGGFLNPFPVPKWKWEHITMDFLFGLLRTSSGHDGIWVIIDRR 600
            YVDRCLICQQVKPVRQRPGGFLNP PVP+WKWEHITMDFLFGL RTSSGHDGIWVI+DR 
Sbjct: 1416 YVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRL 1475

Query: 601  TKTTQFIPIKTTSTLDQLARLYVDKIVSEYGVPVSIVSDRDPRFTSKFWPSLQKAMGIGL 606
            TKTT+FIPIK TSTLDQLARLYVDKIVS+YGVPVSIVSDRDPRFTSKFWPSLQKAMG GL
Sbjct: 1476 TKTTRFIPIKMTSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGL 1535

[Close]

BLAST of Cmc11g0288671 vs. NCBI nr
Match: KAA0041108.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 1130.2 bits (2922), Expect = 0.0e+00
Identity = 566/684 (82.75%), Postives = 583/684 (85.23%), Query Frame = 0


Query: 1    MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNK 60
            MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNK
Sbjct: 1084 MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNK 1143

Query: 61   YPLPCIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKTSFRMRYGHYEFQVMPFGLK 120
            YPLP IDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKT+FR RYGHYEF+VMPFGL 
Sbjct: 1144 YPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLT 1203

Query: 121  NAPAVFMDLINRIFHQYLDQFVIVFIDDILVYSVDREGHEEHLRIVLQTLHDKQLYAKFS 180
            NAPAVFMDL+NRIFH+YLDQFVIVFIDDILVYSVDRE HEEHLRIVLQTL +KQLYAKFS
Sbjct: 1204 NAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFS 1263

Query: 181  K----------------------------SVVNWERPTSAIEVHSFLGLAGYYRRFIENF 240
            K                            +VVNWERP SA EV SFLGLAGYYRRFIE+F
Sbjct: 1264 KCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDF 1323

Query: 241  SRLALPLTALTRKNAKFEWSEKCEQSFQELKKRLVTAPILALPITGNDYVIYCDASRLGL 300
            SRLALPLTALTRKN KFEWS+KCEQSFQELKKRLVTAPILALP+TG DYVIYCDASRLGL
Sbjct: 1324 SRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL 1383

Query: 301  GFVLMQDGNVIAYASRPLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSL 360
            G VLMQDGNVIAYASR LKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSL
Sbjct: 1384 GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSL 1443

Query: 361  KYIFDQKEINLRQRRWLELIKDYDCTIEYHPGKANLVADALSRK---------------- 420
            KYIFDQKE+NLRQRRWLELIKDYDCTIEYHPGKAN+VADALSRK                
Sbjct: 1444 KYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCGIRVALL 1503

Query: 421  -----------------------------------QSEDSNLQKKLEKSKKGLEVEFELR 480
                                               QSEDSNLQKK EKSKKGLEVEFELR
Sbjct: 1504 NELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELR 1563

Query: 481  TDGAIVKQGRLCVPNISEFKNAILKEAHSLAYAMHPGSTKMYRTLKKTYWWPGMKQEIVE 540
            TDGAIVKQGRLCVPNISE KNAIL+EAHS AYAMHPGSTKMYRTLKKTYWW GMKQEI E
Sbjct: 1564 TDGAIVKQGRLCVPNISELKNAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAE 1623

Query: 541  YVDRCLICQQVKPVRQRPGGFLNPFPVPKWKWEHITMDFLFGLLRTSSGHDGIWVIIDRR 600
            YVDRCLICQQVKPVRQRPGGFLNP PVP+WKWEHITMDFLFGL RTSSGHDGIWVI+DR 
Sbjct: 1624 YVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRL 1683

Query: 601  TKTTQFIPIKTTSTLDQLARLYVDKIVSEYGVPVSIVSDRDPRFTSKFWPSLQKAMGIGL 606
            TKTT+FIPIK TSTLDQLARLYVDKIVS+YGVPVSIVSDRDPRFTSKFWPSLQKAMG GL
Sbjct: 1684 TKTTRFIPIKMTSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGL 1743

[Close]

BLAST of Cmc11g0288671 vs. NCBI nr
Match: TYK01991.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 1130.2 bits (2922), Expect = 0.0e+00
Identity = 566/684 (82.75%), Postives = 583/684 (85.23%), Query Frame = 0


Query: 1   MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNK 60
           MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNK
Sbjct: 172 MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNK 231

Query: 61  YPLPCIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKTSFRMRYGHYEFQVMPFGLK 120
           YPLP IDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKT+FR RYGHYEF+VMPFGL 
Sbjct: 232 YPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLT 291

Query: 121 NAPAVFMDLINRIFHQYLDQFVIVFIDDILVYSVDREGHEEHLRIVLQTLHDKQLYAKFS 180
           NAPAVFMDL+NRIFH+YLDQFVIVFIDDILVYSVDRE HEEHLRIVLQTL +KQLYAKFS
Sbjct: 292 NAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFS 351

Query: 181 K----------------------------SVVNWERPTSAIEVHSFLGLAGYYRRFIENF 240
           K                            +VVNWERP SA EV SFLGLAGYYRRFIE+F
Sbjct: 352 KCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDF 411

Query: 241 SRLALPLTALTRKNAKFEWSEKCEQSFQELKKRLVTAPILALPITGNDYVIYCDASRLGL 300
           SRLALPLTALTRKN KFEWS+KCEQSFQELKKRLVTAPILALP+TG DYVIYCDASRLGL
Sbjct: 412 SRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL 471

Query: 301 GFVLMQDGNVIAYASRPLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSL 360
           G VLMQDGNVIAYASR LKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSL
Sbjct: 472 GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSL 531

Query: 361 KYIFDQKEINLRQRRWLELIKDYDCTIEYHPGKANLVADALSRK---------------- 420
           KYIFDQKE+NLRQRRWLELIKDYDCTIEYHPGKAN+VADALSRK                
Sbjct: 532 KYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCGIRVALL 591

Query: 421 -----------------------------------QSEDSNLQKKLEKSKKGLEVEFELR 480
                                              QSEDSNLQKK EKSKKGLEVEFELR
Sbjct: 592 NELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELR 651

Query: 481 TDGAIVKQGRLCVPNISEFKNAILKEAHSLAYAMHPGSTKMYRTLKKTYWWPGMKQEIVE 540
           TDGAIVKQGRLCVPNISE KNAIL+EAHS AYAMHPGSTKMYRTLKKTYWW GMKQEI E
Sbjct: 652 TDGAIVKQGRLCVPNISELKNAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAE 711

Query: 541 YVDRCLICQQVKPVRQRPGGFLNPFPVPKWKWEHITMDFLFGLLRTSSGHDGIWVIIDRR 600
           YVDRCLICQQVKPVRQRPGGFLNP PVP+WKWEHITMDFLFGL RTSSGHDGIWVI+DR 
Sbjct: 712 YVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRL 771

Query: 601 TKTTQFIPIKTTSTLDQLARLYVDKIVSEYGVPVSIVSDRDPRFTSKFWPSLQKAMGIGL 606
           TKTT+FIPIK TSTLDQLARLYVDKIVS+YGVPVSIVSDRDPRFTSKFWPSLQKAMG GL
Sbjct: 772 TKTTRFIPIKMTSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGL 831

[Close]

BLAST of Cmc11g0288671 vs. ExPASy Swiss-Prot
Match: Q7LHG5 (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2)

HSP 1 Score: 375.9 bits (964), Expect = 8.3e-103
Identity = 238/680 (35.00%), Postives = 352/680 (51.76%), Query Frame = 0


Query: 7    KELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPCI 66
            +E+   +Q+L+D  +I PS SP  +PV+ V KKDGT RLC+DYR LNK TI + +PLP I
Sbjct: 636  QEINKIVQKLLDNKFIVPSKSPCSSPVVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRI 695

Query: 67   DDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKTSFRMRYGHYEFQVMPFGLKNAPAVF 126
            D+L  ++  A +F+ +DL SGYHQ+ +   D  KT+F    G YE+ VMPFGL NAP+ F
Sbjct: 696  DNLLSRIGNAQIFTTLDLHSGYHQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTF 755

Query: 127  MDLINRIFHQYLDQFVIVFIDDILVYSVDREGHEEHLRIVLQTLHDKQLYAKFSK----- 186
               +   F     +FV V++DDIL++S   E H +HL  VL+ L ++ L  K  K     
Sbjct: 756  ARYMADTFRDL--RFVNVYLDDILIFSESPEEHWKHLDTVLERLKNENLIVKKKKCKFAS 815

Query: 187  -----------------------SVVNWERPTSAIEVHSFLGLAGYYRRFIENFSRLALP 246
                                   ++ ++  P +  +   FLG+  YYRRFI N S++A P
Sbjct: 816  EETEFLGYSIGIQKIAPLQHKCAAIRDFPTPKTVKQAQRFLGMINYYRRFIPNCSKIAQP 875

Query: 247  LTALTRKNAKFEWSEKCEQSFQELKKRLVTAPILALPITGNDYVIYCDASRLGLGFVLMQ 306
            +        K +W+EK +++ ++LK  L  +P+L       +Y +  DAS+ G+G VL +
Sbjct: 876  IQLFICD--KSQWTEKQDKAIEKLKAALCNSPVLVPFNNKANYRLTTDASKDGIGAVLEE 935

Query: 307  DGN------VIAYASRPLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSL 366
              N      V+ Y S+ L+  + NYP  +LEL  ++ AL  +R+ L G+   + TDH SL
Sbjct: 936  VDNKNKLVGVVGYFSKSLESAQKNYPAGELELLGIIKALHHFRYMLHGKHFTLRTDHISL 995

Query: 367  KYIFDQKEINLRQRRWLELIKDYDCTIEYHPGKANLVADALSR----------------- 426
              + ++ E   R +RWL+ +  YD T+EY  G  N+VADA+SR                 
Sbjct: 996  LSLQNKNEPARRVQRWLDDLATYDFTLEYLAGPKNVVADAISRAIYTITPETSRPIDTES 1055

Query: 427  ------------------KQSEDSNL-----------QKKLEKS---KKGLEVEFELRTD 486
                              K+    N+           QKKLE S   +K   +E E+   
Sbjct: 1056 WKSYYKSDPLCSAVLIHMKELTQHNVTPEDMSAFRSYQKKLELSETFRKNYSLEDEM--- 1115

Query: 487  GAIVKQGRLCVPNISEFKNAILKEAHS-LAYAMHPGSTKMYRTLKKTYWWPGMKQEIVEY 546
              I  Q RL VP   + +NA+++  H    +  H G T     +   Y+WP ++  I++Y
Sbjct: 1116 --IYYQDRLVVP--IKQQNAVMRLYHDHTLFGGHFGVTVTLAKISPIYYWPKLQHSIIQY 1175

Query: 547  VDRCLICQQVKPVRQRPGGFLNPFPVPKWKWEHITMDFLFGLLRTSSGHDGIWVIIDRRT 603
            +  C+ CQ +K  R R  G L P P+ + +W  I+MDF+ GL  TS+  + I V++DR +
Sbjct: 1176 IRTCVQCQLIKSHRPRLHGLLQPLPIAEGRWLDISMDFVTGLPPTSNNLNMILVVVDRFS 1235

[Close]

BLAST of Cmc11g0288671 vs. ExPASy Swiss-Prot
Match: Q99315 (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3)

HSP 1 Score: 375.2 bits (962), Expect = 1.4e-102
Identity = 238/680 (35.00%), Postives = 351/680 (51.62%), Query Frame = 0


Query: 7    KELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPCI 66
            +E+   +Q+L+D  +I PS SP  +PV+ V KKDGT RLC+DYR LNK TI + +PLP I
Sbjct: 610  QEINKIVQKLLDNKFIVPSKSPCSSPVVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRI 669

Query: 67   DDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKTSFRMRYGHYEFQVMPFGLKNAPAVF 126
            D+L  ++  A +F+ +DL SGYHQ+ +   D  KT+F    G YE+ VMPFGL NAP+ F
Sbjct: 670  DNLLSRIGNAQIFTTLDLHSGYHQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTF 729

Query: 127  MDLINRIFHQYLDQFVIVFIDDILVYSVDREGHEEHLRIVLQTLHDKQLYAKFSK----- 186
               +   F     +FV V++DDIL++S   E H +HL  VL+ L ++ L  K  K     
Sbjct: 730  ARYMADTFRDL--RFVNVYLDDILIFSESPEEHWKHLDTVLERLKNENLIVKKKKCKFAS 789

Query: 187  -----------------------SVVNWERPTSAIEVHSFLGLAGYYRRFIENFSRLALP 246
                                   ++ ++  P +  +   FLG+  YYRRFI N S++A P
Sbjct: 790  EETEFLGYSIGIQKIAPLQHKCAAIRDFPTPKTVKQAQRFLGMINYYRRFIPNCSKIAQP 849

Query: 247  LTALTRKNAKFEWSEKCEQSFQELKKRLVTAPILALPITGNDYVIYCDASRLGLGFVLMQ 306
            +        K +W+EK +++  +LK  L  +P+L       +Y +  DAS+ G+G VL +
Sbjct: 850  IQLFICD--KSQWTEKQDKAIDKLKDALCNSPVLVPFNNKANYRLTTDASKDGIGAVLEE 909

Query: 307  DGN------VIAYASRPLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSL 366
              N      V+ Y S+ L+  + NYP  +LEL  ++ AL  +R+ L G+   + TDH SL
Sbjct: 910  VDNKNKLVGVVGYFSKSLESAQKNYPAGELELLGIIKALHHFRYMLHGKHFTLRTDHISL 969

Query: 367  KYIFDQKEINLRQRRWLELIKDYDCTIEYHPGKANLVADALSR----------------- 426
              + ++ E   R +RWL+ +  YD T+EY  G  N+VADA+SR                 
Sbjct: 970  LSLQNKNEPARRVQRWLDDLATYDFTLEYLAGPKNVVADAISRAVYTITPETSRPIDTES 1029

Query: 427  ------------------KQSEDSNL-----------QKKLEKS---KKGLEVEFELRTD 486
                              K+    N+           QKKLE S   +K   +E E+   
Sbjct: 1030 WKSYYKSDPLCSAVLIHMKELTQHNVTPEDMSAFRSYQKKLELSETFRKNYSLEDEM--- 1089

Query: 487  GAIVKQGRLCVPNISEFKNAILKEAHS-LAYAMHPGSTKMYRTLKKTYWWPGMKQEIVEY 546
              I  Q RL VP   + +NA+++  H    +  H G T     +   Y+WP ++  I++Y
Sbjct: 1090 --IYYQDRLVVP--IKQQNAVMRLYHDHTLFGGHFGVTVTLAKISPIYYWPKLQHSIIQY 1149

Query: 547  VDRCLICQQVKPVRQRPGGFLNPFPVPKWKWEHITMDFLFGLLRTSSGHDGIWVIIDRRT 603
            +  C+ CQ +K  R R  G L P P+ + +W  I+MDF+ GL  TS+  + I V++DR +
Sbjct: 1150 IRTCVQCQLIKSHRPRLHGLLQPLPIAEGRWLDISMDFVTGLPPTSNNLNMILVVVDRFS 1209

[Close]

BLAST of Cmc11g0288671 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 372.5 bits (955), Expect = 9.2e-102
Identity = 211/677 (31.17%), Postives = 349/677 (51.55%), Query Frame = 0


Query: 1    MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNK 60
            + P +++ +  ++ + +  G IR S +    PV+FV KK+GTLR+ +DY+ LNK    N 
Sbjct: 420  LPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNI 479

Query: 61   YPLPCIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKTSFRMRYGHYEFQVMPFGLK 120
            YPLP I+ L  +++G+ +F+K+DL+S YH ++VR+ D  K +FR   G +E+ VMP+G+ 
Sbjct: 480  YPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGIS 539

Query: 121  NAPAVFMDLINRIFHQYLDQFVIVFIDDILVYSVDREGHEEHLRIVLQTLHDKQLYAKFS 180
             APA F   IN I  +  +  V+ ++DDIL++S     H +H++ VLQ L +  L    +
Sbjct: 540  TAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQA 599

Query: 181  K----------------------------SVVNWERPTSAIEVHSFLGLAGYYRRFIENF 240
            K                             V+ W++P +  E+  FLG   Y R+FI   
Sbjct: 600  KCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKT 659

Query: 241  SRLALPLTALTRKNAKFEWSEKCEQSFQELKKRLVTAPILALPITGNDYVIYCDASRLGL 300
            S+L  PL  L +K+ +++W+    Q+ + +K+ LV+ P+L         ++  DAS + +
Sbjct: 660  SQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAV 719

Query: 301  GFVLMQDGN-----VIAYASRPLKEHECNYPTHDLELAAVVLALKIWRHYLFG--EKCHI 360
            G VL Q  +      + Y S  + + + NY   D E+ A++ +LK WRHYL    E   I
Sbjct: 720  GAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKI 779

Query: 361  FTDHKSL--KYIFDQKEINLRQRRWLELIKDYDCTIEYHPGKANLVADALSR-------- 420
             TDH++L  +   + +  N R  RW   ++D++  I Y PG AN +ADALSR        
Sbjct: 780  LTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSRIVDETEPI 839

Query: 421  -KQSEDSN--------------------------LQKKLEKSKKGLEVEFELRTDGAIVK 480
             K SED++                          L   L    K +E   +L+    I  
Sbjct: 840  PKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLNLLNNEDKRVEENIQLKDGLLINS 899

Query: 481  QGRLCVPNISEFKNAILKEAHSLAYAMHPGSTKMYRTLKKTYWWPGMKQEIVEYVDRCLI 540
            + ++ +PN ++    I+K+ H     +HPG   +   + + + W G++++I EYV  C  
Sbjct: 900  KDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHT 959

Query: 541  CQQVKPVRQRPGGFLNPFPVPKWKWEHITMDFLFGLLRTSSGHDGIWVIIDRRTKTTQFI 600
            CQ  K    +P G L P P  +  WE ++MDF+   L  SSG++ ++V++DR +K    +
Sbjct: 960  CQINKSRNHKPYGPLQPIPPSERPWESLSMDFITA-LPESSGYNALFVVVDRFSKMAILV 1019

Query: 601  PIKTTSTLDQLARLYVDKIVSEYGVPVSIVSDRDPRFTSKFWPSLQKAMGIGLKFSTSFH 606
            P   + T +Q AR++  ++++ +G P  I++D D  FTS+ W          +KFS  + 
Sbjct: 1020 PCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYR 1079

[Close]

BLAST of Cmc11g0288671 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 372.5 bits (955), Expect = 9.2e-102
Identity = 211/677 (31.17%), Postives = 349/677 (51.55%), Query Frame = 0


Query: 1    MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNK 60
            + P +++ +  ++ + +  G IR S +    PV+FV KK+GTLR+ +DY+ LNK    N 
Sbjct: 420  LPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNI 479

Query: 61   YPLPCIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKTSFRMRYGHYEFQVMPFGLK 120
            YPLP I+ L  +++G+ +F+K+DL+S YH ++VR+ D  K +FR   G +E+ VMP+G+ 
Sbjct: 480  YPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGIS 539

Query: 121  NAPAVFMDLINRIFHQYLDQFVIVFIDDILVYSVDREGHEEHLRIVLQTLHDKQLYAKFS 180
             APA F   IN I  +  +  V+ ++DDIL++S     H +H++ VLQ L +  L    +
Sbjct: 540  TAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQA 599

Query: 181  K----------------------------SVVNWERPTSAIEVHSFLGLAGYYRRFIENF 240
            K                             V+ W++P +  E+  FLG   Y R+FI   
Sbjct: 600  KCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKT 659

Query: 241  SRLALPLTALTRKNAKFEWSEKCEQSFQELKKRLVTAPILALPITGNDYVIYCDASRLGL 300
            S+L  PL  L +K+ +++W+    Q+ + +K+ LV+ P+L         ++  DAS + +
Sbjct: 660  SQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAV 719

Query: 301  GFVLMQDGN-----VIAYASRPLKEHECNYPTHDLELAAVVLALKIWRHYLFG--EKCHI 360
            G VL Q  +      + Y S  + + + NY   D E+ A++ +LK WRHYL    E   I
Sbjct: 720  GAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKI 779

Query: 361  FTDHKSL--KYIFDQKEINLRQRRWLELIKDYDCTIEYHPGKANLVADALSR-------- 420
             TDH++L  +   + +  N R  RW   ++D++  I Y PG AN +ADALSR        
Sbjct: 780  LTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSRIVDETEPI 839

Query: 421  -KQSEDSN--------------------------LQKKLEKSKKGLEVEFELRTDGAIVK 480
             K SED++                          L   L    K +E   +L+    I  
Sbjct: 840  PKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLNLLNNEDKRVEENIQLKDGLLINS 899

Query: 481  QGRLCVPNISEFKNAILKEAHSLAYAMHPGSTKMYRTLKKTYWWPGMKQEIVEYVDRCLI 540
            + ++ +PN ++    I+K+ H     +HPG   +   + + + W G++++I EYV  C  
Sbjct: 900  KDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHT 959

Query: 541  CQQVKPVRQRPGGFLNPFPVPKWKWEHITMDFLFGLLRTSSGHDGIWVIIDRRTKTTQFI 600
            CQ  K    +P G L P P  +  WE ++MDF+   L  SSG++ ++V++DR +K    +
Sbjct: 960  CQINKSRNHKPYGPLQPIPPSERPWESLSMDFITA-LPESSGYNALFVVVDRFSKMAILV 1019

Query: 601  PIKTTSTLDQLARLYVDKIVSEYGVPVSIVSDRDPRFTSKFWPSLQKAMGIGLKFSTSFH 606
            P   + T +Q AR++  ++++ +G P  I++D D  FTS+ W          +KFS  + 
Sbjct: 1020 PCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYR 1079

[Close]

BLAST of Cmc11g0288671 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 372.5 bits (955), Expect = 9.2e-102
Identity = 211/677 (31.17%), Postives = 349/677 (51.55%), Query Frame = 0


Query: 1    MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNK 60
            + P +++ +  ++ + +  G IR S +    PV+FV KK+GTLR+ +DY+ LNK    N 
Sbjct: 420  LPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNI 479

Query: 61   YPLPCIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKTSFRMRYGHYEFQVMPFGLK 120
            YPLP I+ L  +++G+ +F+K+DL+S YH ++VR+ D  K +FR   G +E+ VMP+G+ 
Sbjct: 480  YPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGIS 539

Query: 121  NAPAVFMDLINRIFHQYLDQFVIVFIDDILVYSVDREGHEEHLRIVLQTLHDKQLYAKFS 180
             APA F   IN I  +  +  V+ ++DDIL++S     H +H++ VLQ L +  L    +
Sbjct: 540  TAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQA 599

Query: 181  K----------------------------SVVNWERPTSAIEVHSFLGLAGYYRRFIENF 240
            K                             V+ W++P +  E+  FLG   Y R+FI   
Sbjct: 600  KCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKT 659

Query: 241  SRLALPLTALTRKNAKFEWSEKCEQSFQELKKRLVTAPILALPITGNDYVIYCDASRLGL 300
            S+L  PL  L +K+ +++W+    Q+ + +K+ LV+ P+L         ++  DAS + +
Sbjct: 660  SQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAV 719

Query: 301  GFVLMQDGN-----VIAYASRPLKEHECNYPTHDLELAAVVLALKIWRHYLFG--EKCHI 360
            G VL Q  +      + Y S  + + + NY   D E+ A++ +LK WRHYL    E   I
Sbjct: 720  GAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKI 779

Query: 361  FTDHKSL--KYIFDQKEINLRQRRWLELIKDYDCTIEYHPGKANLVADALSR-------- 420
             TDH++L  +   + +  N R  RW   ++D++  I Y PG AN +ADALSR        
Sbjct: 780  LTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSRIVDETEPI 839

Query: 421  -KQSEDSN--------------------------LQKKLEKSKKGLEVEFELRTDGAIVK 480
             K SED++                          L   L    K +E   +L+    I  
Sbjct: 840  PKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLNLLNNEDKRVEENIQLKDGLLINS 899

Query: 481  QGRLCVPNISEFKNAILKEAHSLAYAMHPGSTKMYRTLKKTYWWPGMKQEIVEYVDRCLI 540
            + ++ +PN ++    I+K+ H     +HPG   +   + + + W G++++I EYV  C  
Sbjct: 900  KDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHT 959

Query: 541  CQQVKPVRQRPGGFLNPFPVPKWKWEHITMDFLFGLLRTSSGHDGIWVIIDRRTKTTQFI 600
            CQ  K    +P G L P P  +  WE ++MDF+   L  SSG++ ++V++DR +K    +
Sbjct: 960  CQINKSRNHKPYGPLQPIPPSERPWESLSMDFITA-LPESSGYNALFVVVDRFSKMAILV 1019

Query: 601  PIKTTSTLDQLARLYVDKIVSEYGVPVSIVSDRDPRFTSKFWPSLQKAMGIGLKFSTSFH 606
            P   + T +Q AR++  ++++ +G P  I++D D  FTS+ W          +KFS  + 
Sbjct: 1020 PCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYR 1079

[Close]

BLAST of Cmc11g0288671 vs. ExPASy TrEMBL
Match: A0A5A7U2V7 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold374G00630 PE=4 SV=1)

HSP 1 Score: 1130.2 bits (2922), Expect = 0.0e+00
Identity = 566/684 (82.75%), Postives = 583/684 (85.23%), Query Frame = 0


Query: 1    MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNK 60
            MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNK
Sbjct: 627  MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNK 686

Query: 61   YPLPCIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKTSFRMRYGHYEFQVMPFGLK 120
            YPLP IDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKT+FR RYGHYEF+VMPFGL 
Sbjct: 687  YPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLT 746

Query: 121  NAPAVFMDLINRIFHQYLDQFVIVFIDDILVYSVDREGHEEHLRIVLQTLHDKQLYAKFS 180
            NAPAVFMDL+NRIFH+YLDQFVIVFIDDILVYSVDRE HEEHLRIVLQTL +KQLYAKFS
Sbjct: 747  NAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFS 806

Query: 181  K----------------------------SVVNWERPTSAIEVHSFLGLAGYYRRFIENF 240
            K                            +VVNWERP SA EV SFLGLAGYYRRFIE+F
Sbjct: 807  KCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDF 866

Query: 241  SRLALPLTALTRKNAKFEWSEKCEQSFQELKKRLVTAPILALPITGNDYVIYCDASRLGL 300
            SRLALPLTALTRKN KFEWS+KCEQSFQELKKRLVTAPILALP+TG DYVIYCDASRLGL
Sbjct: 867  SRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL 926

Query: 301  GFVLMQDGNVIAYASRPLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSL 360
            G VLMQDGNVIAYASR LKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSL
Sbjct: 927  GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSL 986

Query: 361  KYIFDQKEINLRQRRWLELIKDYDCTIEYHPGKANLVADALSRK---------------- 420
            KYIFDQKE+NLRQRRWLELIKDYDCTIEYHPGKAN+VADALSRK                
Sbjct: 987  KYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCGIRVALL 1046

Query: 421  -----------------------------------QSEDSNLQKKLEKSKKGLEVEFELR 480
                                               QSEDSNLQKK EKSKKGLEVEFELR
Sbjct: 1047 NELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELR 1106

Query: 481  TDGAIVKQGRLCVPNISEFKNAILKEAHSLAYAMHPGSTKMYRTLKKTYWWPGMKQEIVE 540
            TDGAIVKQGRLCVPNISE KNAIL+EAHS AYAMHPGSTKMYRTLKKTYWW GMKQEI E
Sbjct: 1107 TDGAIVKQGRLCVPNISELKNAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAE 1166

Query: 541  YVDRCLICQQVKPVRQRPGGFLNPFPVPKWKWEHITMDFLFGLLRTSSGHDGIWVIIDRR 600
            YVDRCLICQQVKPVRQRPGGFLNP PVP+WKWEHITMDFLFGL RTSSGHDGIWVI+DR 
Sbjct: 1167 YVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRL 1226

Query: 601  TKTTQFIPIKTTSTLDQLARLYVDKIVSEYGVPVSIVSDRDPRFTSKFWPSLQKAMGIGL 606
            TKTT+FIPIK TSTLDQLARLYVDKIVS+YGVPVSIVSDRDPRFTSKFWPSLQKAMG GL
Sbjct: 1227 TKTTRFIPIKMTSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGL 1286

[Close]

BLAST of Cmc11g0288671 vs. ExPASy TrEMBL
Match: A0A5D3BHI1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold115G00450 PE=4 SV=1)

HSP 1 Score: 1130.2 bits (2922), Expect = 0.0e+00
Identity = 566/684 (82.75%), Postives = 583/684 (85.23%), Query Frame = 0


Query: 1    MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNK 60
            MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNK
Sbjct: 665  MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNK 724

Query: 61   YPLPCIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKTSFRMRYGHYEFQVMPFGLK 120
            YPLP IDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKT+FR RYGHYEF+VMPFGL 
Sbjct: 725  YPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLT 784

Query: 121  NAPAVFMDLINRIFHQYLDQFVIVFIDDILVYSVDREGHEEHLRIVLQTLHDKQLYAKFS 180
            NAPAVFMDL+NRIFH+YLDQFVIVFIDDILVYSVDRE HEEHLRIVLQTL +KQLYAKFS
Sbjct: 785  NAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFS 844

Query: 181  K----------------------------SVVNWERPTSAIEVHSFLGLAGYYRRFIENF 240
            K                            +VVNWERP SA EV SFLGLAGYYRRFIE+F
Sbjct: 845  KCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDF 904

Query: 241  SRLALPLTALTRKNAKFEWSEKCEQSFQELKKRLVTAPILALPITGNDYVIYCDASRLGL 300
            SRLALPLTALTRKN KFEWS+KCEQSFQELKKRLVTAPILALP+TG DYVIYCDASRLGL
Sbjct: 905  SRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL 964

Query: 301  GFVLMQDGNVIAYASRPLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSL 360
            G VLMQDGNVIAYASR LKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSL
Sbjct: 965  GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSL 1024

Query: 361  KYIFDQKEINLRQRRWLELIKDYDCTIEYHPGKANLVADALSRK---------------- 420
            KYIFDQKE+NLRQRRWLELIKDYDCTIEYHPGKAN+VADALSRK                
Sbjct: 1025 KYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCGIRVALL 1084

Query: 421  -----------------------------------QSEDSNLQKKLEKSKKGLEVEFELR 480
                                               QSEDSNLQKK EKSKKGLEVEFELR
Sbjct: 1085 NELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELR 1144

Query: 481  TDGAIVKQGRLCVPNISEFKNAILKEAHSLAYAMHPGSTKMYRTLKKTYWWPGMKQEIVE 540
            TDGAIVKQGRLCVPNISE KNAIL+EAHS AYAMHPGSTKMYRTLKKTYWW GMKQEI E
Sbjct: 1145 TDGAIVKQGRLCVPNISELKNAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAE 1204

Query: 541  YVDRCLICQQVKPVRQRPGGFLNPFPVPKWKWEHITMDFLFGLLRTSSGHDGIWVIIDRR 600
            YVDRCLICQQVKPVRQRPGGFLNP PVP+WKWEHITMDFLFGL RTSSGHDGIWVI+DR 
Sbjct: 1205 YVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRL 1264

Query: 601  TKTTQFIPIKTTSTLDQLARLYVDKIVSEYGVPVSIVSDRDPRFTSKFWPSLQKAMGIGL 606
            TKTT+FIPIK TSTLDQLARLYVDKIVS+YGVPVSIVSDRDPRFTSKFWPSLQKAMG GL
Sbjct: 1265 TKTTRFIPIKMTSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGL 1324

[Close]

BLAST of Cmc11g0288671 vs. ExPASy TrEMBL
Match: A0A5A7T1Y5 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold436G00980 PE=4 SV=1)

HSP 1 Score: 1130.2 bits (2922), Expect = 0.0e+00
Identity = 566/684 (82.75%), Postives = 583/684 (85.23%), Query Frame = 0


Query: 1    MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNK 60
            MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNK
Sbjct: 665  MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNK 724

Query: 61   YPLPCIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKTSFRMRYGHYEFQVMPFGLK 120
            YPLP IDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKT+FR RYGHYEF+VMPFGL 
Sbjct: 725  YPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLT 784

Query: 121  NAPAVFMDLINRIFHQYLDQFVIVFIDDILVYSVDREGHEEHLRIVLQTLHDKQLYAKFS 180
            NAPAVFMDL+NRIFH+YLDQFVIVFIDDILVYSVDRE HEEHLRIVLQTL +KQLYAKFS
Sbjct: 785  NAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFS 844

Query: 181  K----------------------------SVVNWERPTSAIEVHSFLGLAGYYRRFIENF 240
            K                            +VVNWERP SA EV SFLGLAGYYRRFIE+F
Sbjct: 845  KCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDF 904

Query: 241  SRLALPLTALTRKNAKFEWSEKCEQSFQELKKRLVTAPILALPITGNDYVIYCDASRLGL 300
            SRLALPLTALTRKN KFEWS+KCEQSFQELKKRLVTAPILALP+TG DYVIYCDASRLGL
Sbjct: 905  SRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL 964

Query: 301  GFVLMQDGNVIAYASRPLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSL 360
            G VLMQDGNVIAYASR LKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSL
Sbjct: 965  GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSL 1024

Query: 361  KYIFDQKEINLRQRRWLELIKDYDCTIEYHPGKANLVADALSRK---------------- 420
            KYIFDQKE+NLRQRRWLELIKDYDCTIEYHPGKAN+VADALSRK                
Sbjct: 1025 KYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCGIRVALL 1084

Query: 421  -----------------------------------QSEDSNLQKKLEKSKKGLEVEFELR 480
                                               QSEDSNLQKK EKSKKGLEVEFELR
Sbjct: 1085 NELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELR 1144

Query: 481  TDGAIVKQGRLCVPNISEFKNAILKEAHSLAYAMHPGSTKMYRTLKKTYWWPGMKQEIVE 540
            TDGAIVKQGRLCVPNISE KNAIL+EAHS AYAMHPGSTKMYRTLKKTYWW GMKQEI E
Sbjct: 1145 TDGAIVKQGRLCVPNISELKNAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAE 1204

Query: 541  YVDRCLICQQVKPVRQRPGGFLNPFPVPKWKWEHITMDFLFGLLRTSSGHDGIWVIIDRR 600
            YVDRCLICQQVKPVRQRPGGFLNP PVP+WKWEHITMDFLFGL RTSSGHDGIWVI+DR 
Sbjct: 1205 YVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRL 1264

Query: 601  TKTTQFIPIKTTSTLDQLARLYVDKIVSEYGVPVSIVSDRDPRFTSKFWPSLQKAMGIGL 606
            TKTT+FIPIK TSTLDQLARLYVDKIVS+YGVPVSIVSDRDPRFTSKFWPSLQKAMG GL
Sbjct: 1265 TKTTRFIPIKMTSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGL 1324

[Close]

BLAST of Cmc11g0288671 vs. ExPASy TrEMBL
Match: A0A5A7UUL6 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold132G00090 PE=4 SV=1)

HSP 1 Score: 1130.2 bits (2922), Expect = 0.0e+00
Identity = 566/684 (82.75%), Postives = 583/684 (85.23%), Query Frame = 0


Query: 1   MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNK 60
           MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNK
Sbjct: 297 MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNK 356

Query: 61  YPLPCIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKTSFRMRYGHYEFQVMPFGLK 120
           YPLP IDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKT+FR RYGHYEF+VMPFGL 
Sbjct: 357 YPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLT 416

Query: 121 NAPAVFMDLINRIFHQYLDQFVIVFIDDILVYSVDREGHEEHLRIVLQTLHDKQLYAKFS 180
           NAPAVFMDL+NRIFH+YLDQFVIVFIDDILVYSVDRE HEEHLRIVLQTL +KQLYAKFS
Sbjct: 417 NAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFS 476

Query: 181 K----------------------------SVVNWERPTSAIEVHSFLGLAGYYRRFIENF 240
           K                            +VVNWERP SA EV SFLGLAGYYRRFIE+F
Sbjct: 477 KCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDF 536

Query: 241 SRLALPLTALTRKNAKFEWSEKCEQSFQELKKRLVTAPILALPITGNDYVIYCDASRLGL 300
           SRLALPLTALTRKN KFEWS+KCEQSFQELKKRLVTAPILALP+TG DYVIYCDASRLGL
Sbjct: 537 SRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL 596

Query: 301 GFVLMQDGNVIAYASRPLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSL 360
           G VLMQDGNVIAYASR LKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSL
Sbjct: 597 GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSL 656

Query: 361 KYIFDQKEINLRQRRWLELIKDYDCTIEYHPGKANLVADALSRK---------------- 420
           KYIFDQKE+NLRQRRWLELIKDYDCTIEYHPGKAN+VADALSRK                
Sbjct: 657 KYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCGIRVALL 716

Query: 421 -----------------------------------QSEDSNLQKKLEKSKKGLEVEFELR 480
                                              QSEDSNLQKK EKSKKGLEVEFELR
Sbjct: 717 NELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELR 776

Query: 481 TDGAIVKQGRLCVPNISEFKNAILKEAHSLAYAMHPGSTKMYRTLKKTYWWPGMKQEIVE 540
           TDGAIVKQGRLCVPNISE KNAIL+EAHS AYAMHPGSTKMYRTLKKTYWW GMKQEI E
Sbjct: 777 TDGAIVKQGRLCVPNISELKNAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAE 836

Query: 541 YVDRCLICQQVKPVRQRPGGFLNPFPVPKWKWEHITMDFLFGLLRTSSGHDGIWVIIDRR 600
           YVDRCLICQQVKPVRQRPGGFLNP PVP+WKWEHITMDFLFGL RTSSGHDGIWVI+DR 
Sbjct: 837 YVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRL 896

Query: 601 TKTTQFIPIKTTSTLDQLARLYVDKIVSEYGVPVSIVSDRDPRFTSKFWPSLQKAMGIGL 606
           TKTT+FIPIK TSTLDQLARLYVDKIVS+YGVPVSIVSDRDPRFTSKFWPSLQKAMG GL
Sbjct: 897 TKTTRFIPIKMTSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGL 956

[Close]

BLAST of Cmc11g0288671 vs. ExPASy TrEMBL
Match: A0A5A7UNA3 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold73G00100 PE=4 SV=1)

HSP 1 Score: 1130.2 bits (2922), Expect = 0.0e+00
Identity = 566/684 (82.75%), Postives = 583/684 (85.23%), Query Frame = 0


Query: 1    MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNK 60
            MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNK
Sbjct: 876  MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNK 935

Query: 61   YPLPCIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKTSFRMRYGHYEFQVMPFGLK 120
            YPLP IDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKT+FR RYGHYEF+VMPFGL 
Sbjct: 936  YPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLT 995

Query: 121  NAPAVFMDLINRIFHQYLDQFVIVFIDDILVYSVDREGHEEHLRIVLQTLHDKQLYAKFS 180
            NAPAVFMDL+NRIFH+YLDQFVIVFIDDILVYSVDRE HEEHLRIVLQTL +KQLYAKFS
Sbjct: 996  NAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFS 1055

Query: 181  K----------------------------SVVNWERPTSAIEVHSFLGLAGYYRRFIENF 240
            K                            +VVNWERP SA EV SFLGLAGYYRRFIE+F
Sbjct: 1056 KCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDF 1115

Query: 241  SRLALPLTALTRKNAKFEWSEKCEQSFQELKKRLVTAPILALPITGNDYVIYCDASRLGL 300
            SRLALPLTALTRKN KFEWS+KCEQSFQELKKRLVTAPILALP+TG DYVIYCDASRLGL
Sbjct: 1116 SRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL 1175

Query: 301  GFVLMQDGNVIAYASRPLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSL 360
            G VLMQDGNVIAYASR LKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSL
Sbjct: 1176 GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSL 1235

Query: 361  KYIFDQKEINLRQRRWLELIKDYDCTIEYHPGKANLVADALSRK---------------- 420
            KYIFDQKE+NLRQRRWLELIKDYDCTIEYHPGKAN+VADALSRK                
Sbjct: 1236 KYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCGIRVALL 1295

Query: 421  -----------------------------------QSEDSNLQKKLEKSKKGLEVEFELR 480
                                               QSEDSNLQKK EKSKKGLEVEFELR
Sbjct: 1296 NELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELR 1355

Query: 481  TDGAIVKQGRLCVPNISEFKNAILKEAHSLAYAMHPGSTKMYRTLKKTYWWPGMKQEIVE 540
            TDGAIVKQGRLCVPNISE KNAIL+EAHS AYAMHPGSTKMYRTLKKTYWW GMKQEI E
Sbjct: 1356 TDGAIVKQGRLCVPNISELKNAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAE 1415

Query: 541  YVDRCLICQQVKPVRQRPGGFLNPFPVPKWKWEHITMDFLFGLLRTSSGHDGIWVIIDRR 600
            YVDRCLICQQVKPVRQRPGGFLNP PVP+WKWEHITMDFLFGL RTSSGHDGIWVI+DR 
Sbjct: 1416 YVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRL 1475

Query: 601  TKTTQFIPIKTTSTLDQLARLYVDKIVSEYGVPVSIVSDRDPRFTSKFWPSLQKAMGIGL 606
            TKTT+FIPIK TSTLDQLARLYVDKIVS+YGVPVSIVSDRDPRFTSKFWPSLQKAMG GL
Sbjct: 1476 TKTTRFIPIKMTSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGL 1535

[Close]

BLAST of Cmc11g0288671 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 75.5 bits (184), Expect = 1.7e-13
Identity = 32/75 (42.67%), Postives = 50/75 (66.67%), Query Frame = 0


Query: 181 KSVVNWERPTSAIEVHSFLGLAGYYRRFIENFSRLALPLTALTRKNAKFEWSEKCEQSFQ 240
           +++V W  P +  E+  FLGL GYYRRF++N+ ++  PLT L +KN+  +W+E    +F+
Sbjct: 52  EAMVGWPEPKNTTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKKNS-LKWTEMAALAFK 111

Query: 241 ELKKRLVTAPILALP 256
            LK  + T P+LALP
Sbjct: 112 ALKGAVTTLPVLALP 125

The following BLAST results are available for this feature:

BLAST of Cmc11g0288671 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0035455.1	0.0e+00	82.75	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >KAA0046782.1...	[more]
KAA0037582.1	0.0e+00	82.75	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]	[more]
KAA0056684.1	0.0e+00	82.75	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]	[more]
KAA0041108.1	0.0e+00	82.75	reverse transcriptase [Cucumis melo var. makuwa]	[more]
TYK01991.1	0.0e+00	82.75	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc11g0288671 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q7LHG5	8.3e-103	35.00	Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
Q99315	1.4e-102	35.00	Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
P0CT41	9.2e-102	31.17	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	9.2e-102	31.17	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT35	9.2e-102	31.17	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Cmc11g0288671 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U2V7	0.0e+00	82.75	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold37...	[more]
A0A5D3BHI1	0.0e+00	82.75	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11...	[more]
A0A5A7T1Y5	0.0e+00	82.75	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold43...	[more]
A0A5A7UUL6	0.0e+00	82.75	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold13...	[more]
A0A5A7UNA3	0.0e+00	82.75	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold73...	[more]

BLAST of Cmc11g0288671 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00860.1	1.7e-13	42.67	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.340.70		coord: 380..473 e-value: 3.9E-19 score: 70.7
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 1..121 e-value: 4.3E-74 score: 250.4
None	No IPR available	GENE3D	3.10.20.370		coord: 261..326 e-value: 3.6E-5 score: 25.7
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 181..483
None	No IPR available	PANTHER	PTHR24559:SF355	PROTEIN, PUTATIVE-RELATED	coord: 181..483
None	No IPR available	CDD	cd01647	RT_LTR	coord: 20..183 e-value: 1.87712E-80 score: 249.435
None	No IPR available	CDD	cd09274	RNase_HI_RT_Ty3	coord: 262..376 e-value: 3.76168E-54 score: 178.07
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 36..184 e-value: 1.1E-22 score: 80.6
IPR000477	Reverse transcriptase domain	PROSITE	PS50878	RT_POL	coord: 17..203 score: 12.872922
IPR041373	Reverse transcriptase, RNase H-like domain	PFAM	PF17917	RT_RNaseH	coord: 260..355 e-value: 2.1E-29 score: 101.9
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 61..183 e-value: 4.3E-74 score: 250.4
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 185..260 e-value: 1.8E-28 score: 100.4
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 484..605 e-value: 1.6E-27 score: 98.1
IPR041588	Integrase zinc-binding domain	PFAM	PF17921	Integrase_H2C2	coord: 419..474 e-value: 5.1E-19 score: 68.1
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 483..605 score: 16.86499
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 2..361
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 484..604

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc11g0288671.1	Cmc11g0288671.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding