Cmc11g0288641 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc11g0288641
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr11: 3144996 .. 3145934 (-)
RNA-Seq Expression	Cmc11g0288641
Synteny	Cmc11g0288641

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGCAAGGCAGGGTAGTTGCTTATGCCTCCCGCCAGCTGAAGAGTCATGAGCATAACCATCCTACCCATGACCTAGAGTTGGCAGCAATGATTTTTGCACTGAAGATATGGAGACATTACCTGTACGGTGAGAAGATACAGATTTCCACTGACCATAAGAGCCTGAAGTACTTCTTTACCCAGAAGGAGTTGAACATGAGGCAGAGGAGGTGGCTTGAGTTAGTGAAAGACTATGACTGCGAGATTTTGTATCACCCAGGTAAGGCAAACGTAGTAGCTGACGTGTTGAGTAGGAAGGTTGCGCATTCTGCAGCGCTTATCACCAAGCAAGCTCCCTTACTAAGAGATCTCGAGAGAGCTGAGATTGCAGTCTCAGTAGGAGAAGTGACCTCACAGTTGGCCCAGTTGACCGTGCAGCTGACCTTGAGACAGAGGATTATTGTTGCTCAGCTAAATGATCCTTACTTGGTCGAGAAGCGTCTATTAGTAGAGGCAGGACGAAGTGAGGATTTCTCCATATCCTCTGACGACGGACTTACTTTCAATGGACGTTTGTACGTGCCAGAAGACAGTGCAGTCAAGGAAGAGCTTTTGAAGGAGGCTCACAGTTCTCCATTTGCTATGCACCCTAGAAGTACGAAGATGTACCAAGACTTGAGGTGTGTTTATTGGTGGAGGAACATGAAGAGAGAAGTGGTAGACTTTGTCAGTAGATGCTTGGTGTGTCAGCAAGTGAAGGCACCTAGACAGAGGCCAGCGGGGCTATTGCAACCCTTGAGTGTGCCAGAATGGAAATGGGAGAGCGTGTCGATGGACTTCATTACGGGACTGTCCAAGACCCTAAAGGGCTACACAGACATTTGGGTTGTCGTCAACAGACTCACAAAGTCAGCCCACTTTGTGCCAGGGAAATCCACTTACACAGCCAGTAAGTGA

mRNA sequence

ATGCAGCAAGGCAGGGTAGTTGCTTATGCCTCCCGCCAGCTGAAGAGTCATGAGCATAACCATCCTACCCATGACCTAGAGTTGGCAGCAATGATTTTTGCACTGAAGATATGGAGACATTACCTGTACGGTGAGAAGATACAGATTTCCACTGACCATAAGAGCCTGAAGTACTTCTTTACCCAGAAGGAGTTGAACATGAGGCAGAGGAGGTGGCTTGAGTTAGTGAAAGACTATGACTGCGAGATTTTGTATCACCCAGGTAAGGCAAACGTAGTAGCTGACGTGTTGAGTAGGAAGGTTGCGCATTCTGCAGCGCTTATCACCAAGCAAGCTCCCTTACTAAGAGATCTCGAGAGAGCTGAGATTGCAGTCTCAGTAGGAGAAGTGACCTCACAGTTGGCCCAGTTGACCGTGCAGCTGACCTTGAGACAGAGGATTATTGTTGCTCAGCTAAATGATCCTTACTTGGTCGAGAAGCGTCTATTAGTAGAGGCAGGACGAAGTGAGGATTTCTCCATATCCTCTGACGACGGACTTACTTTCAATGGACGTTTGTACGTGCCAGAAGACAGTGCAGTCAAGGAAGAGCTTTTGAAGGAGGCTCACAGTTCTCCATTTGCTATGCACCCTAGAAGTACGAAGATGTACCAAGACTTGAGGTGTGTTTATTGGTGGAGGAACATGAAGAGAGAAGTGGTAGACTTTGTCAGTAGATGCTTGGTGTGTCAGCAAGTGAAGGCACCTAGACAGAGGCCAGCGGGGCTATTGCAACCCTTGAGTGTGCCAGAATGGAAATGGGAGAGCGTGTCGATGGACTTCATTACGGGACTGTCCAAGACCCTAAAGGGCTACACAGACATTTGGGTTGTCGTCAACAGACTCACAAAGTCAGCCCACTTTGTGCCAGGGAAATCCACTTACACAGCCAGTAAGTGA

Coding sequence (CDS)

ATGCAGCAAGGCAGGGTAGTTGCTTATGCCTCCCGCCAGCTGAAGAGTCATGAGCATAACCATCCTACCCATGACCTAGAGTTGGCAGCAATGATTTTTGCACTGAAGATATGGAGACATTACCTGTACGGTGAGAAGATACAGATTTCCACTGACCATAAGAGCCTGAAGTACTTCTTTACCCAGAAGGAGTTGAACATGAGGCAGAGGAGGTGGCTTGAGTTAGTGAAAGACTATGACTGCGAGATTTTGTATCACCCAGGTAAGGCAAACGTAGTAGCTGACGTGTTGAGTAGGAAGGTTGCGCATTCTGCAGCGCTTATCACCAAGCAAGCTCCCTTACTAAGAGATCTCGAGAGAGCTGAGATTGCAGTCTCAGTAGGAGAAGTGACCTCACAGTTGGCCCAGTTGACCGTGCAGCTGACCTTGAGACAGAGGATTATTGTTGCTCAGCTAAATGATCCTTACTTGGTCGAGAAGCGTCTATTAGTAGAGGCAGGACGAAGTGAGGATTTCTCCATATCCTCTGACGACGGACTTACTTTCAATGGACGTTTGTACGTGCCAGAAGACAGTGCAGTCAAGGAAGAGCTTTTGAAGGAGGCTCACAGTTCTCCATTTGCTATGCACCCTAGAAGTACGAAGATGTACCAAGACTTGAGGTGTGTTTATTGGTGGAGGAACATGAAGAGAGAAGTGGTAGACTTTGTCAGTAGATGCTTGGTGTGTCAGCAAGTGAAGGCACCTAGACAGAGGCCAGCGGGGCTATTGCAACCCTTGAGTGTGCCAGAATGGAAATGGGAGAGCGTGTCGATGGACTTCATTACGGGACTGTCCAAGACCCTAAAGGGCTACACAGACATTTGGGTTGTCGTCAACAGACTCACAAAGTCAGCCCACTTTGTGCCAGGGAAATCCACTTACACAGCCAGTAAGTGA

Protein sequence

MQQGRVVAYASRQLKSHEHNHPTHDLELAAMIFALKIWRHYLYGEKIQISTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADVLSRKVAHSAALITKQAPLLRDLERAEIAVSVGEVTSQLAQLTVQLTLRQRIIVAQLNDPYLVEKRLLVEAGRSEDFSISSDDGLTFNGRLYVPEDSAVKEELLKEAHSSPFAMHPRSTKMYQDLRCVYWWRNMKREVVDFVSRCLVCQQVKAPRQRPAGLLQPLSVPEWKWESVSMDFITGLSKTLKGYTDIWVVVNRLTKSAHFVPGKSTYTASK

Homology

[Close]

BLAST of Cmc11g0288641 vs. NCBI nr
Match: TYK08868.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 559.7 bits (1441), Expect = 1.6e-155
Identity = 281/312 (90.06%), Postives = 289/312 (92.63%), Query Frame = 0


Query: 1   MQQGRVVAYASRQLKSHEHNHPTHDLELAAMIFALKIWRHYLYGEKIQISTDHKSLKYFF 60
           MQQG+VVAYASRQLKSHE N+PTHDLELAA++F LKIWRHYLYGE+IQI TDHKSLKYFF
Sbjct: 263 MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFTLKIWRHYLYGERIQIYTDHKSLKYFF 322

Query: 61  TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADVLSRKVAHSAALITKQAPLLRDLER 120
           TQKELNMRQRRWLELVKDYDCEILYHPGKANVVAD LSRKVAHSAALITKQ PLLRD ER
Sbjct: 323 TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFER 382

Query: 121 AEIAVSVGEVTSQLAQLTVQLTLRQRIIVAQLNDPYLVEKRLLVEAGRSEDFSISSDDGL 180
           AEIAVSVGEVTSQLAQL VQ TLRQRIIVAQLNDPYLVEKR LVE  + EDFSISS+DGL
Sbjct: 383 AEIAVSVGEVTSQLAQLLVQPTLRQRIIVAQLNDPYLVEKRRLVETEQGEDFSISSNDGL 442

Query: 181 TFNGRLYVPEDSAVKEELLKEAHSSPFAMHPRSTKMYQDLRCVYWWRNMKREVVDFVSRC 240
            F GRL VPEDSAVK ELL EAHSSPF MHP STKMYQDLR VYWWRNMKREV DFVSRC
Sbjct: 443 MFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRNMKREVADFVSRC 502

Query: 241 LVCQQVKAPRQRPAGLLQPLSVPEWKWESVSMDFITGLSKTLKGYTDIWVVVNRLTKSAH 300
           LVCQQVKAPRQRPAGLLQPLSVP WKWESVSMDFITGLSKTLKGYT IWVVV+RLTKSAH
Sbjct: 503 LVCQQVKAPRQRPAGLLQPLSVPGWKWESVSMDFITGLSKTLKGYTVIWVVVDRLTKSAH 562

Query: 301 FVPGKSTYTASK 313
           FVPGKSTYTASK
Sbjct: 563 FVPGKSTYTASK 574

[Close]

BLAST of Cmc11g0288641 vs. NCBI nr
Match: KAA0050011.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 558.5 bits (1438), Expect = 3.6e-155
Identity = 279/310 (90.00%), Postives = 288/310 (92.90%), Query Frame = 0


Query: 1   MQQGRVVAYASRQLKSHEHNHPTHDLELAAMIFALKIWRHYLYGEKIQISTDHKSLKYFF 60
           MQQGRVVAYASRQLKSHE N+PTHDLELAA++FALKIWRHYLYGEKIQI TDHKSLKYFF
Sbjct: 598 MQQGRVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIITDHKSLKYFF 657

Query: 61  TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADVLSRKVAHSAALITKQAPLLRDLER 120
           TQKELNMRQRRWLELVKDYDCE+LYHPGKANVVAD LSRKVAHSAALITKQAPLLRD ER
Sbjct: 658 TQKELNMRQRRWLELVKDYDCEMLYHPGKANVVADALSRKVAHSAALITKQAPLLRDFER 717

Query: 121 AEIAVSVGEVTSQLAQLTVQLTLRQRIIVAQLNDPYLVEKRLLVEAGRSEDFSISSDDGL 180
           AEIAVSVGEVTSQLAQL+VQ TLRQRIIVAQLNDPYLVEKR LVE G+ EDFSISSDDGL
Sbjct: 718 AEIAVSVGEVTSQLAQLSVQPTLRQRIIVAQLNDPYLVEKRRLVETGQGEDFSISSDDGL 777

Query: 181 TFNGRLYVPEDSAVKEELLKEAHSSPFAMHPRSTKMYQDLRCVYWWRNMKREVVDFVSRC 240
           TF GRL VP+DSA+K ELL E HSSPF MHP STKMYQDLR VYWWRNMKREV DFVSRC
Sbjct: 778 TFEGRLCVPKDSAIKTELLTEIHSSPFTMHPGSTKMYQDLRSVYWWRNMKREVADFVSRC 837

Query: 241 LVCQQVKAPRQRPAGLLQPLSVPEWKWESVSMDFITGLSKTLKGYTDIWVVVNRLTKSAH 300
           LVCQQVKAPRQRPAGLLQPLSVP WKWESVSMDFI GL KTLKGYT IWVVV+RLTKSAH
Sbjct: 838 LVCQQVKAPRQRPAGLLQPLSVPGWKWESVSMDFIRGLPKTLKGYTVIWVVVDRLTKSAH 897

Query: 301 FVPGKSTYTA 311
            VPGKSTYTA
Sbjct: 898 LVPGKSTYTA 907

[Close]

BLAST of Cmc11g0288641 vs. NCBI nr
Match: KAA0035204.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 555.1 bits (1429), Expect = 3.9e-154
Identity = 276/312 (88.46%), Postives = 288/312 (92.31%), Query Frame = 0


Query: 1    MQQGRVVAYASRQLKSHEHNHPTHDLELAAMIFALKIWRHYLYGEKIQISTDHKSLKYFF 60
            MQQG+VVAYASRQLK HE N+PTHDLELAA++FALKIWRHYLYGEKIQI TDHKSLKYFF
Sbjct: 837  MQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFF 896

Query: 61   TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADVLSRKVAHSAALITKQAPLLRDLER 120
            TQKELNMRQRRWLELVKDYDCEILYHPGKANVVAD LSRKVAHSAALITKQ PLLRD ER
Sbjct: 897  TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFER 956

Query: 121  AEIAVSVGEVTSQLAQLTVQLTLRQRIIVAQLNDPYLVEKRLLVEAGRSEDFSISSDDGL 180
            AEIAVSVGEVT+QLAQL+VQ TLRQ+IIVAQL DPYLVEKR +VE G+ E+FSISSDDGL
Sbjct: 957  AEIAVSVGEVTAQLAQLSVQPTLRQKIIVAQLEDPYLVEKRRMVETGQGENFSISSDDGL 1016

Query: 181  TFNGRLYVPEDSAVKEELLKEAHSSPFAMHPRSTKMYQDLRCVYWWRNMKREVVDFVSRC 240
             F GRL VPEDS VK ELL EAHSSPF MHP STKMYQDLR VYWWRNMKREV DF+SRC
Sbjct: 1017 MFEGRLCVPEDSVVKTELLSEAHSSPFTMHPGSTKMYQDLRSVYWWRNMKREVADFISRC 1076

Query: 241  LVCQQVKAPRQRPAGLLQPLSVPEWKWESVSMDFITGLSKTLKGYTDIWVVVNRLTKSAH 300
            LVCQQVKAPRQRPAGLLQPLSVP WKWESVSMDFITGL KTLKGYT IWVVV+RLTKSAH
Sbjct: 1077 LVCQQVKAPRQRPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAH 1136

Query: 301  FVPGKSTYTASK 313
            FVPGKSTYTASK
Sbjct: 1137 FVPGKSTYTASK 1148

[Close]

BLAST of Cmc11g0288641 vs. NCBI nr
Match: KAA0035890.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 553.1 bits (1424), Expect = 1.5e-153
Identity = 276/312 (88.46%), Postives = 286/312 (91.67%), Query Frame = 0


Query: 1   MQQGRVVAYASRQLKSHEHNHPTHDLELAAMIFALKIWRHYLYGEKIQISTDHKSLKYFF 60
           MQQG+VVAYASRQLK HE N+PTHDLELAA++FALKIWRHYLYGEKIQI TDHKSLKYFF
Sbjct: 441 MQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFF 500

Query: 61  TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADVLSRKVAHSAALITKQAPLLRDLER 120
           TQKELNMRQRRWLELVKDYDCEILYHPGKANVVAD LSRKVAHSAALITKQ PLLRD ER
Sbjct: 501 TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFER 560

Query: 121 AEIAVSVGEVTSQLAQLTVQLTLRQRIIVAQLNDPYLVEKRLLVEAGRSEDFSISSDDGL 180
           AEIAVSVGEVT+QLAQL+VQ TLRQ+II AQLNDPYL EKR +VE G+ EDFSISSDDGL
Sbjct: 561 AEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVETGQGEDFSISSDDGL 620

Query: 181 TFNGRLYVPEDSAVKEELLKEAHSSPFAMHPRSTKMYQDLRCVYWWRNMKREVVDFVSRC 240
            F GRL VPEDSAVK ELL EAHSSPF MHP STKMYQDLR VYWWR MKREV DFVSRC
Sbjct: 621 MFEGRLCVPEDSAVKMELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKREVADFVSRC 680

Query: 241 LVCQQVKAPRQRPAGLLQPLSVPEWKWESVSMDFITGLSKTLKGYTDIWVVVNRLTKSAH 300
           LVCQQVKAPRQ PAGLLQPLSVP WKWESVSMDFITGL KTLKGYT IWVVV+RLTKSAH
Sbjct: 681 LVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAH 740

Query: 301 FVPGKSTYTASK 313
           FVPGKSTYTASK
Sbjct: 741 FVPGKSTYTASK 752

[Close]

BLAST of Cmc11g0288641 vs. NCBI nr
Match: KAA0045309.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 552.7 bits (1423), Expect = 2.0e-153
Identity = 276/312 (88.46%), Postives = 286/312 (91.67%), Query Frame = 0


Query: 1   MQQGRVVAYASRQLKSHEHNHPTHDLELAAMIFALKIWRHYLYGEKIQISTDHKSLKYFF 60
           MQQG+VVAYASRQLK HE N+PTHDLELAA++FALKIWRHYLYGEKIQI TDHKSLKYFF
Sbjct: 441 MQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFF 500

Query: 61  TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADVLSRKVAHSAALITKQAPLLRDLER 120
           TQKELNMRQRRWLELVKDYDCEILYHPGKANVVAD LSRKVAHSAALITKQ PLLRD ER
Sbjct: 501 TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADSLSRKVAHSAALITKQTPLLRDFER 560

Query: 121 AEIAVSVGEVTSQLAQLTVQLTLRQRIIVAQLNDPYLVEKRLLVEAGRSEDFSISSDDGL 180
           AEIAVSVGEVT+QLAQL+VQ TLRQ+II AQLNDPYL EKR +VE G+ EDFSISSDDGL
Sbjct: 561 AEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVETGQGEDFSISSDDGL 620

Query: 181 TFNGRLYVPEDSAVKEELLKEAHSSPFAMHPRSTKMYQDLRCVYWWRNMKREVVDFVSRC 240
            F GRL VPEDSAVK ELL EAHSSPF MHP STKMYQDLR VYWWR MKREV DFVSRC
Sbjct: 621 MFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKREVADFVSRC 680

Query: 241 LVCQQVKAPRQRPAGLLQPLSVPEWKWESVSMDFITGLSKTLKGYTDIWVVVNRLTKSAH 300
           LVCQQVKAPRQ PAGLLQPLSVP WKWESVSMDFITGL KTLKGYT IWVVV+RLTKSAH
Sbjct: 681 LVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAH 740

Query: 301 FVPGKSTYTASK 313
           FVPGKSTYTASK
Sbjct: 741 FVPGKSTYTASK 752

[Close]

BLAST of Cmc11g0288641 vs. ExPASy Swiss-Prot
Match: Q9UR07 (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 6.1e-33
Identity = 94/312 (30.13%), Postives = 160/312 (51.28%), Query Frame = 0


Query: 7    VAYASRQLKSHEHNHPTHDLELAAMIFALKIWRHYLYG--EKIQISTDHKSLKYFFTQKE 66
            V Y S ++   + N+   D E+ A+I +LK WRHYL    E  +I TDH++L    T + 
Sbjct: 735  VGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNES 794

Query: 67   --LNMRQRRWLELVKDYDCEILYHPGKANVVADVLSRKVAHSAALITKQAPLLRDLERAE 126
               N R  RW   ++D++ EI Y PG AN +AD LSR       ++ +  P+ +D E   
Sbjct: 795  EPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR-------IVDETEPIPKDSEDNS 854

Query: 127  IAVSVGEVTSQLAQLTVQLTLRQRIIVAQLNDPYLVEKRLLVEAGRSEDFSISSDDGLTF 186
            I        + + Q+++    + +++    ND  L+   LL    +  + +I   DGL  
Sbjct: 855  I--------NFVNQISITDDFKNQVVTEYTNDTKLL--NLLNNEDKRVEENIQLKDGLLI 914

Query: 187  NGR--LYVPEDSAVKEELLKEAHSSPFAMHPRSTKMYQDLRCVYWWRNMKREVVDFVSRC 246
            N +  + +P D+ +   ++K+ H     +HP    +   +   + W+ +++++ ++V  C
Sbjct: 915  NSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNC 974

Query: 247  LVCQQVKAPRQRPAGLLQPLSVPEWKWESVSMDFITGLSKTLKGYTDIWVVVNRLTKSAH 306
              CQ  K+   +P G LQP+   E  WES+SMDFIT L ++  GY  ++VVV+R +K A 
Sbjct: 975  HTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAI 1028

Query: 307  FVPGKSTYTASK 313
             VP   + TA +
Sbjct: 1035 LVPCTKSITAEQ 1028

[Close]

BLAST of Cmc11g0288641 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 6.1e-33
Identity = 94/312 (30.13%), Postives = 160/312 (51.28%), Query Frame = 0


Query: 7    VAYASRQLKSHEHNHPTHDLELAAMIFALKIWRHYLYG--EKIQISTDHKSLKYFFTQKE 66
            V Y S ++   + N+   D E+ A+I +LK WRHYL    E  +I TDH++L    T + 
Sbjct: 735  VGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNES 794

Query: 67   --LNMRQRRWLELVKDYDCEILYHPGKANVVADVLSRKVAHSAALITKQAPLLRDLERAE 126
               N R  RW   ++D++ EI Y PG AN +AD LSR       ++ +  P+ +D E   
Sbjct: 795  EPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR-------IVDETEPIPKDSEDNS 854

Query: 127  IAVSVGEVTSQLAQLTVQLTLRQRIIVAQLNDPYLVEKRLLVEAGRSEDFSISSDDGLTF 186
            I        + + Q+++    + +++    ND  L+   LL    +  + +I   DGL  
Sbjct: 855  I--------NFVNQISITDDFKNQVVTEYTNDTKLL--NLLNNEDKRVEENIQLKDGLLI 914

Query: 187  NGR--LYVPEDSAVKEELLKEAHSSPFAMHPRSTKMYQDLRCVYWWRNMKREVVDFVSRC 246
            N +  + +P D+ +   ++K+ H     +HP    +   +   + W+ +++++ ++V  C
Sbjct: 915  NSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNC 974

Query: 247  LVCQQVKAPRQRPAGLLQPLSVPEWKWESVSMDFITGLSKTLKGYTDIWVVVNRLTKSAH 306
              CQ  K+   +P G LQP+   E  WES+SMDFIT L ++  GY  ++VVV+R +K A 
Sbjct: 975  HTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAI 1028

Query: 307  FVPGKSTYTASK 313
             VP   + TA +
Sbjct: 1035 LVPCTKSITAEQ 1028

[Close]

BLAST of Cmc11g0288641 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 6.1e-33
Identity = 94/312 (30.13%), Postives = 160/312 (51.28%), Query Frame = 0


Query: 7    VAYASRQLKSHEHNHPTHDLELAAMIFALKIWRHYLYG--EKIQISTDHKSLKYFFTQKE 66
            V Y S ++   + N+   D E+ A+I +LK WRHYL    E  +I TDH++L    T + 
Sbjct: 735  VGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNES 794

Query: 67   --LNMRQRRWLELVKDYDCEILYHPGKANVVADVLSRKVAHSAALITKQAPLLRDLERAE 126
               N R  RW   ++D++ EI Y PG AN +AD LSR       ++ +  P+ +D E   
Sbjct: 795  EPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR-------IVDETEPIPKDSEDNS 854

Query: 127  IAVSVGEVTSQLAQLTVQLTLRQRIIVAQLNDPYLVEKRLLVEAGRSEDFSISSDDGLTF 186
            I        + + Q+++    + +++    ND  L+   LL    +  + +I   DGL  
Sbjct: 855  I--------NFVNQISITDDFKNQVVTEYTNDTKLL--NLLNNEDKRVEENIQLKDGLLI 914

Query: 187  NGR--LYVPEDSAVKEELLKEAHSSPFAMHPRSTKMYQDLRCVYWWRNMKREVVDFVSRC 246
            N +  + +P D+ +   ++K+ H     +HP    +   +   + W+ +++++ ++V  C
Sbjct: 915  NSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNC 974

Query: 247  LVCQQVKAPRQRPAGLLQPLSVPEWKWESVSMDFITGLSKTLKGYTDIWVVVNRLTKSAH 306
              CQ  K+   +P G LQP+   E  WES+SMDFIT L ++  GY  ++VVV+R +K A 
Sbjct: 975  HTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAI 1028

Query: 307  FVPGKSTYTASK 313
             VP   + TA +
Sbjct: 1035 LVPCTKSITAEQ 1028

[Close]

BLAST of Cmc11g0288641 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 6.1e-33
Identity = 94/312 (30.13%), Postives = 160/312 (51.28%), Query Frame = 0


Query: 7    VAYASRQLKSHEHNHPTHDLELAAMIFALKIWRHYLYG--EKIQISTDHKSLKYFFTQKE 66
            V Y S ++   + N+   D E+ A+I +LK WRHYL    E  +I TDH++L    T + 
Sbjct: 735  VGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNES 794

Query: 67   --LNMRQRRWLELVKDYDCEILYHPGKANVVADVLSRKVAHSAALITKQAPLLRDLERAE 126
               N R  RW   ++D++ EI Y PG AN +AD LSR       ++ +  P+ +D E   
Sbjct: 795  EPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR-------IVDETEPIPKDSEDNS 854

Query: 127  IAVSVGEVTSQLAQLTVQLTLRQRIIVAQLNDPYLVEKRLLVEAGRSEDFSISSDDGLTF 186
            I        + + Q+++    + +++    ND  L+   LL    +  + +I   DGL  
Sbjct: 855  I--------NFVNQISITDDFKNQVVTEYTNDTKLL--NLLNNEDKRVEENIQLKDGLLI 914

Query: 187  NGR--LYVPEDSAVKEELLKEAHSSPFAMHPRSTKMYQDLRCVYWWRNMKREVVDFVSRC 246
            N +  + +P D+ +   ++K+ H     +HP    +   +   + W+ +++++ ++V  C
Sbjct: 915  NSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNC 974

Query: 247  LVCQQVKAPRQRPAGLLQPLSVPEWKWESVSMDFITGLSKTLKGYTDIWVVVNRLTKSAH 306
              CQ  K+   +P G LQP+   E  WES+SMDFIT L ++  GY  ++VVV+R +K A 
Sbjct: 975  HTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAI 1028

Query: 307  FVPGKSTYTASK 313
             VP   + TA +
Sbjct: 1035 LVPCTKSITAEQ 1028

[Close]

BLAST of Cmc11g0288641 vs. ExPASy Swiss-Prot
Match: P0CT36 (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-3 PE=1 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 6.1e-33
Identity = 94/312 (30.13%), Postives = 160/312 (51.28%), Query Frame = 0


Query: 7    VAYASRQLKSHEHNHPTHDLELAAMIFALKIWRHYLYG--EKIQISTDHKSLKYFFTQKE 66
            V Y S ++   + N+   D E+ A+I +LK WRHYL    E  +I TDH++L    T + 
Sbjct: 735  VGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNES 794

Query: 67   --LNMRQRRWLELVKDYDCEILYHPGKANVVADVLSRKVAHSAALITKQAPLLRDLERAE 126
               N R  RW   ++D++ EI Y PG AN +AD LSR       ++ +  P+ +D E   
Sbjct: 795  EPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR-------IVDETEPIPKDSEDNS 854

Query: 127  IAVSVGEVTSQLAQLTVQLTLRQRIIVAQLNDPYLVEKRLLVEAGRSEDFSISSDDGLTF 186
            I        + + Q+++    + +++    ND  L+   LL    +  + +I   DGL  
Sbjct: 855  I--------NFVNQISITDDFKNQVVTEYTNDTKLL--NLLNNEDKRVEENIQLKDGLLI 914

Query: 187  NGR--LYVPEDSAVKEELLKEAHSSPFAMHPRSTKMYQDLRCVYWWRNMKREVVDFVSRC 246
            N +  + +P D+ +   ++K+ H     +HP    +   +   + W+ +++++ ++V  C
Sbjct: 915  NSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNC 974

Query: 247  LVCQQVKAPRQRPAGLLQPLSVPEWKWESVSMDFITGLSKTLKGYTDIWVVVNRLTKSAH 306
              CQ  K+   +P G LQP+   E  WES+SMDFIT L ++  GY  ++VVV+R +K A 
Sbjct: 975  HTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAI 1028

Query: 307  FVPGKSTYTASK 313
             VP   + TA +
Sbjct: 1035 LVPCTKSITAEQ 1028

[Close]

BLAST of Cmc11g0288641 vs. ExPASy TrEMBL
Match: A0A5D3CCF0 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold87G00620 PE=4 SV=1)

HSP 1 Score: 559.7 bits (1441), Expect = 7.8e-156
Identity = 281/312 (90.06%), Postives = 289/312 (92.63%), Query Frame = 0


Query: 1   MQQGRVVAYASRQLKSHEHNHPTHDLELAAMIFALKIWRHYLYGEKIQISTDHKSLKYFF 60
           MQQG+VVAYASRQLKSHE N+PTHDLELAA++F LKIWRHYLYGE+IQI TDHKSLKYFF
Sbjct: 263 MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFTLKIWRHYLYGERIQIYTDHKSLKYFF 322

Query: 61  TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADVLSRKVAHSAALITKQAPLLRDLER 120
           TQKELNMRQRRWLELVKDYDCEILYHPGKANVVAD LSRKVAHSAALITKQ PLLRD ER
Sbjct: 323 TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFER 382

Query: 121 AEIAVSVGEVTSQLAQLTVQLTLRQRIIVAQLNDPYLVEKRLLVEAGRSEDFSISSDDGL 180
           AEIAVSVGEVTSQLAQL VQ TLRQRIIVAQLNDPYLVEKR LVE  + EDFSISS+DGL
Sbjct: 383 AEIAVSVGEVTSQLAQLLVQPTLRQRIIVAQLNDPYLVEKRRLVETEQGEDFSISSNDGL 442

Query: 181 TFNGRLYVPEDSAVKEELLKEAHSSPFAMHPRSTKMYQDLRCVYWWRNMKREVVDFVSRC 240
            F GRL VPEDSAVK ELL EAHSSPF MHP STKMYQDLR VYWWRNMKREV DFVSRC
Sbjct: 443 MFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRNMKREVADFVSRC 502

Query: 241 LVCQQVKAPRQRPAGLLQPLSVPEWKWESVSMDFITGLSKTLKGYTDIWVVVNRLTKSAH 300
           LVCQQVKAPRQRPAGLLQPLSVP WKWESVSMDFITGLSKTLKGYT IWVVV+RLTKSAH
Sbjct: 503 LVCQQVKAPRQRPAGLLQPLSVPGWKWESVSMDFITGLSKTLKGYTVIWVVVDRLTKSAH 562

Query: 301 FVPGKSTYTASK 313
           FVPGKSTYTASK
Sbjct: 563 FVPGKSTYTASK 574

[Close]

BLAST of Cmc11g0288641 vs. ExPASy TrEMBL
Match: A0A5A7U8T4 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold13G001960 PE=4 SV=1)

HSP 1 Score: 558.5 bits (1438), Expect = 1.7e-155
Identity = 279/310 (90.00%), Postives = 288/310 (92.90%), Query Frame = 0


Query: 1   MQQGRVVAYASRQLKSHEHNHPTHDLELAAMIFALKIWRHYLYGEKIQISTDHKSLKYFF 60
           MQQGRVVAYASRQLKSHE N+PTHDLELAA++FALKIWRHYLYGEKIQI TDHKSLKYFF
Sbjct: 598 MQQGRVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIITDHKSLKYFF 657

Query: 61  TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADVLSRKVAHSAALITKQAPLLRDLER 120
           TQKELNMRQRRWLELVKDYDCE+LYHPGKANVVAD LSRKVAHSAALITKQAPLLRD ER
Sbjct: 658 TQKELNMRQRRWLELVKDYDCEMLYHPGKANVVADALSRKVAHSAALITKQAPLLRDFER 717

Query: 121 AEIAVSVGEVTSQLAQLTVQLTLRQRIIVAQLNDPYLVEKRLLVEAGRSEDFSISSDDGL 180
           AEIAVSVGEVTSQLAQL+VQ TLRQRIIVAQLNDPYLVEKR LVE G+ EDFSISSDDGL
Sbjct: 718 AEIAVSVGEVTSQLAQLSVQPTLRQRIIVAQLNDPYLVEKRRLVETGQGEDFSISSDDGL 777

Query: 181 TFNGRLYVPEDSAVKEELLKEAHSSPFAMHPRSTKMYQDLRCVYWWRNMKREVVDFVSRC 240
           TF GRL VP+DSA+K ELL E HSSPF MHP STKMYQDLR VYWWRNMKREV DFVSRC
Sbjct: 778 TFEGRLCVPKDSAIKTELLTEIHSSPFTMHPGSTKMYQDLRSVYWWRNMKREVADFVSRC 837

Query: 241 LVCQQVKAPRQRPAGLLQPLSVPEWKWESVSMDFITGLSKTLKGYTDIWVVVNRLTKSAH 300
           LVCQQVKAPRQRPAGLLQPLSVP WKWESVSMDFI GL KTLKGYT IWVVV+RLTKSAH
Sbjct: 838 LVCQQVKAPRQRPAGLLQPLSVPGWKWESVSMDFIRGLPKTLKGYTVIWVVVDRLTKSAH 897

Query: 301 FVPGKSTYTA 311
            VPGKSTYTA
Sbjct: 898 LVPGKSTYTA 907

[Close]

BLAST of Cmc11g0288641 vs. ExPASy TrEMBL
Match: A0A5A7SVA8 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold346G00290 PE=4 SV=1)

HSP 1 Score: 555.1 bits (1429), Expect = 1.9e-154
Identity = 276/312 (88.46%), Postives = 288/312 (92.31%), Query Frame = 0


Query: 1    MQQGRVVAYASRQLKSHEHNHPTHDLELAAMIFALKIWRHYLYGEKIQISTDHKSLKYFF 60
            MQQG+VVAYASRQLK HE N+PTHDLELAA++FALKIWRHYLYGEKIQI TDHKSLKYFF
Sbjct: 837  MQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFF 896

Query: 61   TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADVLSRKVAHSAALITKQAPLLRDLER 120
            TQKELNMRQRRWLELVKDYDCEILYHPGKANVVAD LSRKVAHSAALITKQ PLLRD ER
Sbjct: 897  TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFER 956

Query: 121  AEIAVSVGEVTSQLAQLTVQLTLRQRIIVAQLNDPYLVEKRLLVEAGRSEDFSISSDDGL 180
            AEIAVSVGEVT+QLAQL+VQ TLRQ+IIVAQL DPYLVEKR +VE G+ E+FSISSDDGL
Sbjct: 957  AEIAVSVGEVTAQLAQLSVQPTLRQKIIVAQLEDPYLVEKRRMVETGQGENFSISSDDGL 1016

Query: 181  TFNGRLYVPEDSAVKEELLKEAHSSPFAMHPRSTKMYQDLRCVYWWRNMKREVVDFVSRC 240
             F GRL VPEDS VK ELL EAHSSPF MHP STKMYQDLR VYWWRNMKREV DF+SRC
Sbjct: 1017 MFEGRLCVPEDSVVKTELLSEAHSSPFTMHPGSTKMYQDLRSVYWWRNMKREVADFISRC 1076

Query: 241  LVCQQVKAPRQRPAGLLQPLSVPEWKWESVSMDFITGLSKTLKGYTDIWVVVNRLTKSAH 300
            LVCQQVKAPRQRPAGLLQPLSVP WKWESVSMDFITGL KTLKGYT IWVVV+RLTKSAH
Sbjct: 1077 LVCQQVKAPRQRPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAH 1136

Query: 301  FVPGKSTYTASK 313
            FVPGKSTYTASK
Sbjct: 1137 FVPGKSTYTASK 1148

[Close]

BLAST of Cmc11g0288641 vs. ExPASy TrEMBL
Match: A0A5A7SXW6 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold56G00560 PE=4 SV=1)

HSP 1 Score: 553.1 bits (1424), Expect = 7.3e-154
Identity = 276/312 (88.46%), Postives = 286/312 (91.67%), Query Frame = 0


Query: 1   MQQGRVVAYASRQLKSHEHNHPTHDLELAAMIFALKIWRHYLYGEKIQISTDHKSLKYFF 60
           MQQG+VVAYASRQLK HE N+PTHDLELAA++FALKIWRHYLYGEKIQI TDHKSLKYFF
Sbjct: 441 MQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFF 500

Query: 61  TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADVLSRKVAHSAALITKQAPLLRDLER 120
           TQKELNMRQRRWLELVKDYDCEILYHPGKANVVAD LSRKVAHSAALITKQ PLLRD ER
Sbjct: 501 TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFER 560

Query: 121 AEIAVSVGEVTSQLAQLTVQLTLRQRIIVAQLNDPYLVEKRLLVEAGRSEDFSISSDDGL 180
           AEIAVSVGEVT+QLAQL+VQ TLRQ+II AQLNDPYL EKR +VE G+ EDFSISSDDGL
Sbjct: 561 AEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVETGQGEDFSISSDDGL 620

Query: 181 TFNGRLYVPEDSAVKEELLKEAHSSPFAMHPRSTKMYQDLRCVYWWRNMKREVVDFVSRC 240
            F GRL VPEDSAVK ELL EAHSSPF MHP STKMYQDLR VYWWR MKREV DFVSRC
Sbjct: 621 MFEGRLCVPEDSAVKMELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKREVADFVSRC 680

Query: 241 LVCQQVKAPRQRPAGLLQPLSVPEWKWESVSMDFITGLSKTLKGYTDIWVVVNRLTKSAH 300
           LVCQQVKAPRQ PAGLLQPLSVP WKWESVSMDFITGL KTLKGYT IWVVV+RLTKSAH
Sbjct: 681 LVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAH 740

Query: 301 FVPGKSTYTASK 313
           FVPGKSTYTASK
Sbjct: 741 FVPGKSTYTASK 752

[Close]

BLAST of Cmc11g0288641 vs. ExPASy TrEMBL
Match: A0A5A7TVN9 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold316G00750 PE=4 SV=1)

HSP 1 Score: 552.7 bits (1423), Expect = 9.5e-154
Identity = 276/312 (88.46%), Postives = 286/312 (91.67%), Query Frame = 0


Query: 1   MQQGRVVAYASRQLKSHEHNHPTHDLELAAMIFALKIWRHYLYGEKIQISTDHKSLKYFF 60
           MQQG+VVAYASRQLK HE N+PTHDLELAA++FALKIWRHYLYGEKIQI TDHKSLKYFF
Sbjct: 441 MQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFF 500

Query: 61  TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADVLSRKVAHSAALITKQAPLLRDLER 120
           TQKELNMRQRRWLELVKDYDCEILYHPGKANVVAD LSRKVAHSAALITKQ PLLRD ER
Sbjct: 501 TQKELNMRQRRWLELVKDYDCEILYHPGKANVVADSLSRKVAHSAALITKQTPLLRDFER 560

Query: 121 AEIAVSVGEVTSQLAQLTVQLTLRQRIIVAQLNDPYLVEKRLLVEAGRSEDFSISSDDGL 180
           AEIAVSVGEVT+QLAQL+VQ TLRQ+II AQLNDPYL EKR +VE G+ EDFSISSDDGL
Sbjct: 561 AEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVETGQGEDFSISSDDGL 620

Query: 181 TFNGRLYVPEDSAVKEELLKEAHSSPFAMHPRSTKMYQDLRCVYWWRNMKREVVDFVSRC 240
            F GRL VPEDSAVK ELL EAHSSPF MHP STKMYQDLR VYWWR MKREV DFVSRC
Sbjct: 621 MFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKREVADFVSRC 680

Query: 241 LVCQQVKAPRQRPAGLLQPLSVPEWKWESVSMDFITGLSKTLKGYTDIWVVVNRLTKSAH 300
           LVCQQVKAPRQ PAGLLQPLSVP WKWESVSMDFITGL KTLKGYT IWVVV+RLTKSAH
Sbjct: 681 LVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAH 740

Query: 301 FVPGKSTYTASK 313
           FVPGKSTYTASK
Sbjct: 741 FVPGKSTYTASK 752

The following BLAST results are available for this feature:

BLAST of Cmc11g0288641 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK08868.1	1.6e-155	90.06	pol protein [Cucumis melo var. makuwa]	[more]
KAA0050011.1	3.6e-155	90.00	pol protein [Cucumis melo var. makuwa]	[more]
KAA0035204.1	3.9e-154	88.46	reverse transcriptase [Cucumis melo var. makuwa]	[more]
KAA0035890.1	1.5e-153	88.46	pol protein [Cucumis melo var. makuwa]	[more]
KAA0045309.1	2.0e-153	88.46	pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc11g0288641 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9UR07	6.1e-33	30.13	Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT41	6.1e-33	30.13	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	6.1e-33	30.13	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT35	6.1e-33	30.13	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT36	6.1e-33	30.13	Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Cmc11g0288641 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CCF0	7.8e-156	90.06	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold87G00620 PE=...	[more]
A0A5A7U8T4	1.7e-155	90.00	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold13G001960 PE...	[more]
A0A5A7SVA8	1.9e-154	88.46	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold34...	[more]
A0A5A7SXW6	7.3e-154	88.46	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold56...	[more]
A0A5A7TVN9	9.5e-154	88.46	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold31...	[more]

BLAST of Cmc11g0288641 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR041373	Reverse transcriptase, RNase H-like domain	PFAM	PF17917	RT_RNaseH	coord: 4..79 e-value: 4.3E-24 score: 84.8
IPR041588	Integrase zinc-binding domain	PFAM	PF17921	Integrase_H2C2	coord: 192..248 e-value: 1.8E-16 score: 60.0
None	No IPR available	GENE3D	1.10.340.70		coord: 153..247 e-value: 7.2E-17 score: 63.4
None	No IPR available	GENE3D	3.10.20.370		coord: 2..50 e-value: 8.4E-6 score: 27.7
None	No IPR available	PANTHER	PTHR24559:SF355	PROTEIN, PUTATIVE-RELATED	coord: 1..100
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 1..100
None	No IPR available	CDD	cd09274	RNase_HI_RT_Ty3	coord: 2..101 e-value: 1.2481E-47 score: 154.188
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 1..85

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc11g0288641.1	Cmc11g0288641.1	mRNA