Cmc11g0288281 (gene) Melon (Charmono) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAATCCGTTTGCCTTCGGTCCTCCTCAGTGCCAAGCAGATTCTCAAGATGAAGTCTGTTTCTACAAGATGTCAGTCTGACGTTCCCAAAGGCCATATTCCGGTGTACGTCGGAGAAAACCAGAGAAAGCGATTTTTTGTTCCGATTTCTTACTTGAATCATCCTTCATTTGTGAATTTACTTAGTAGAGCTGAAGAAGAGTTTGGATTCAGCCATCCAACTGGAGGTTTGATCATTCCCTGCAAAGAAGAAGCCTTCATTGATGTCACTTCTAGATTGCATATTTCATGA ATGGGAATCCGTTTGCCTTCGGTCCTCCTCAGTGCCAAGCAGATTCTCAAGATGAAGTCTGTTTCTACAAGATGTCAGTCTGACGTTCCCAAAGGCCATATTCCGGTGTACGTCGGAGAAAACCAGAGAAAGCGATTTTTTGTTCCGATTTCTTACTTGAATCATCCTTCATTTGTGAATTTACTTAGTAGAGCTGAAGAAGAGTTTGGATTCAGCCATCCAACTGGAGGTTTGATCATTCCCTGCAAAGAAGAAGCCTTCATTGATGTCACTTCTAGATTGCATATTTCATGA ATGGGAATCCGTTTGCCTTCGGTCCTCCTCAGTGCCAAGCAGATTCTCAAGATGAAGTCTGTTTCTACAAGATGTCAGTCTGACGTTCCCAAAGGCCATATTCCGGTGTACGTCGGAGAAAACCAGAGAAAGCGATTTTTTGTTCCGATTTCTTACTTGAATCATCCTTCATTTGTGAATTTACTTAGTAGAGCTGAAGAAGAGTTTGGATTCAGCCATCCAACTGGAGGTTTGATCATTCCCTGCAAAGAAGAAGCCTTCATTGATGTCACTTCTAGATTGCATATTTCATGA MGIRLPSVLLSAKQILKMKSVSTRCQSDVPKGHIPVYVGENQRKRFFVPISYLNHPSFVNLLSRAEEEFGFSHPTGGLIIPCKEEAFIDVTSRLHIS Homology
BLAST of Cmc11g0288281 vs. NCBI nr
Match: KGN61931.2 (hypothetical protein Csa_006339 [Cucumis sativus]) HSP 1 Score: 196.8 bits (499), Expect = 8.5e-47 Identity = 95/97 (97.94%), Postives = 96/97 (98.97%), Query Frame = 0
BLAST of Cmc11g0288281 vs. NCBI nr
Match: XP_011649272.1 (auxin-responsive protein SAUR21 [Cucumis sativus]) HSP 1 Score: 194.5 bits (493), Expect = 4.2e-46 Identity = 94/97 (96.91%), Postives = 95/97 (97.94%), Query Frame = 0
BLAST of Cmc11g0288281 vs. NCBI nr
Match: XP_011649275.1 (auxin-responsive protein SAUR23 [Cucumis sativus]) HSP 1 Score: 194.1 bits (492), Expect = 5.5e-46 Identity = 94/97 (96.91%), Postives = 94/97 (96.91%), Query Frame = 0
BLAST of Cmc11g0288281 vs. NCBI nr
Match: XP_008457634.1 (PREDICTED: auxin-responsive protein SAUR21-like [Cucumis melo] >KAA0045675.1 auxin-responsive protein SAUR21-like [Cucumis melo var. makuwa] >TYJ99608.1 auxin-responsive protein SAUR21-like [Cucumis melo var. makuwa]) HSP 1 Score: 192.6 bits (488), Expect = 1.6e-45 Identity = 93/97 (95.88%), Postives = 95/97 (97.94%), Query Frame = 0
BLAST of Cmc11g0288281 vs. NCBI nr
Match: XP_022146116.1 (auxin-responsive protein SAUR23-like [Momordica charantia]) HSP 1 Score: 172.9 bits (437), Expect = 1.3e-39 Identity = 82/97 (84.54%), Postives = 89/97 (91.75%), Query Frame = 0
BLAST of Cmc11g0288281 vs. ExPASy Swiss-Prot
Match: Q9FK62 (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 6.2e-24 Identity = 55/86 (63.95%), Postives = 65/86 (75.58%), Query Frame = 0
BLAST of Cmc11g0288281 vs. ExPASy Swiss-Prot
Match: Q9FJF6 (Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana OX=3702 GN=SAUR23 PE=2 SV=1) HSP 1 Score: 110.9 bits (276), Expect = 8.0e-24 Identity = 55/87 (63.22%), Postives = 65/87 (74.71%), Query Frame = 0
BLAST of Cmc11g0288281 vs. ExPASy Swiss-Prot
Match: Q9FJG0 (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana OX=3702 GN=SAUR20 PE=1 SV=1) HSP 1 Score: 110.5 bits (275), Expect = 1.0e-23 Identity = 55/85 (64.71%), Postives = 64/85 (75.29%), Query Frame = 0
BLAST of Cmc11g0288281 vs. ExPASy Swiss-Prot
Match: Q9FJF7 (Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana OX=3702 GN=SAUR22 PE=2 SV=1) HSP 1 Score: 110.2 bits (274), Expect = 1.4e-23 Identity = 54/86 (62.79%), Postives = 65/86 (75.58%), Query Frame = 0
BLAST of Cmc11g0288281 vs. ExPASy Swiss-Prot
Match: Q9FJG1 (Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana OX=3702 GN=SAUR19 PE=2 SV=1) HSP 1 Score: 109.8 bits (273), Expect = 1.8e-23 Identity = 54/86 (62.79%), Postives = 66/86 (76.74%), Query Frame = 0
BLAST of Cmc11g0288281 vs. ExPASy TrEMBL
Match: A0A0A0LM65 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G258730 PE=3 SV=1) HSP 1 Score: 194.5 bits (493), Expect = 2.0e-46 Identity = 94/97 (96.91%), Postives = 95/97 (97.94%), Query Frame = 0
BLAST of Cmc11g0288281 vs. ExPASy TrEMBL
Match: A0A0A0LLF7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G258750 PE=3 SV=1) HSP 1 Score: 194.1 bits (492), Expect = 2.7e-46 Identity = 94/97 (96.91%), Postives = 94/97 (96.91%), Query Frame = 0
BLAST of Cmc11g0288281 vs. ExPASy TrEMBL
Match: A0A5A7TWB4 (Auxin-responsive protein SAUR21-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G001820 PE=3 SV=1) HSP 1 Score: 192.6 bits (488), Expect = 7.8e-46 Identity = 93/97 (95.88%), Postives = 95/97 (97.94%), Query Frame = 0
BLAST of Cmc11g0288281 vs. ExPASy TrEMBL
Match: A0A1S3C626 (auxin-responsive protein SAUR21-like OS=Cucumis melo OX=3656 GN=LOC103497282 PE=3 SV=1) HSP 1 Score: 192.6 bits (488), Expect = 7.8e-46 Identity = 93/97 (95.88%), Postives = 95/97 (97.94%), Query Frame = 0
BLAST of Cmc11g0288281 vs. ExPASy TrEMBL
Match: A0A6J1CYD2 (auxin-responsive protein SAUR23-like OS=Momordica charantia OX=3673 GN=LOC111015411 PE=3 SV=1) HSP 1 Score: 172.9 bits (437), Expect = 6.4e-40 Identity = 82/97 (84.54%), Postives = 89/97 (91.75%), Query Frame = 0
BLAST of Cmc11g0288281 vs. TAIR 10
Match: AT4G38840.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 119.0 bits (297), Expect = 2.1e-27 Identity = 58/99 (58.59%), Postives = 71/99 (71.72%), Query Frame = 0
BLAST of Cmc11g0288281 vs. TAIR 10
Match: AT4G34810.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 111.7 bits (278), Expect = 3.3e-25 Identity = 57/104 (54.81%), Postives = 74/104 (71.15%), Query Frame = 0
BLAST of Cmc11g0288281 vs. TAIR 10
Match: AT2G21210.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 111.3 bits (277), Expect = 4.4e-25 Identity = 56/98 (57.14%), Postives = 70/98 (71.43%), Query Frame = 0
BLAST of Cmc11g0288281 vs. TAIR 10
Match: AT5G18080.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 111.3 bits (277), Expect = 4.4e-25 Identity = 55/86 (63.95%), Postives = 65/86 (75.58%), Query Frame = 0
BLAST of Cmc11g0288281 vs. TAIR 10
Match: AT5G18060.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 110.9 bits (276), Expect = 5.7e-25 Identity = 55/87 (63.22%), Postives = 65/87 (74.71%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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