Cmc11g0287911 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc11g0287911
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr11: 2755244 .. 2757124 (+)
RNA-Seq Expression	Cmc11g0287911
Synteny	Cmc11g0287911

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGGCTAGTAAACTGCTCAGCCAGGGAACTTGGGGCATCTTGGCAAGCGTAGTGGATATTAGAGAGCCAGAAGTTTCCCTATCGTCTGAACCAGTGGTGAGGGAGTACCCCGATGTTTTCCCAGACGAACTCCCAGGACTTCCGCCTCCCAGAGAAGTAGACTTCGCCATCGAGTTAGAGCCGGGCACTGCCCCTATCTCGAGGGCCCCTTACAGAATGGCTCCAGCCGAGCTAAAGGAGTTGAAGGTCCGGTTACAGGAGTTGCTGGACAAAGGCTTCATCCGGCCCAGTGTGTCGCCTTGGGGAGCCCCAGTATTGTTCGTGAAGAAGAAGGATGGGTCGATGCGCCTTTGTATTGACTACCGAGAGCTGAACAAGGTGACAGTCAAAAACCGCTACCCCTTGCCCAGAATTGACGACCTGTTCGATCAGTTGCAGGGAGCCACTGTCTTTTCCAAGATCGACCTGCGATCAGGCTATCACCAGTTGAGGATTAGGGACGGTGACATTCCCAAGACGGCCTTTCGATCGAGGTACGGACATTACGAATTCGTTGTGATGTCTTTCGGCTTGACTAACGCTCCTGCAGTATTCATGGATTTGATGAACAGGGTGTTTAAGGACTTTCTAGACTCGTTCGTCATAGTCTTCATTGACGACATCCTCATTTACTCAAAAACTGAGGCGGAGCACGAGAAGCACTTACACCAGGTTTTGGAGACCCTTCGAGCCAACAAGTTGTATGCCAAATTCTCCAAGTGTGAATTCTGGTTAAGGAAGGTGACGTTTCTTGGCCACGTGGTTTCCAGTGAGGGAGTTTCAGTAGATCCCGCAAAGATTGAAGCGGTGACCAACTGGACTCGACCGTCCACGGTTAGTGAAATTCGAAGTTTTCTGGGCTTGGCAGGTTACTACAGGAGGTTCGTGGAAGACTTCTCACGTATAGCCAGCCCGTTGACCCAGTTGACCAGAAAGGGAACCCCTTTTGTCTGGAGCCCAGCATGCGAGAGGAGCTTTCAGGAGCTCAAACAGAAGCTAGTGACTGCACCGGTCCTGACAGTGCCCGATGGTTCGGGAAACTTTGTAATTTATAGTGACGCCTCCAAGAAGGGACTGGGCTGTGTCCTGATGCAGCAAGGTAAGGTAGTTGCTTATGCCTCCCGCCAGTTGAAGATCCATGAGCAGAACTACCCTACCCATGACTTGGAGTTGGCAGCTGTAGTCTTTGCACTGAAGATATGGAGGCACCATCTGTACGGTGAGAAGATTCAGATTTACACCGACCATAAGAGCCTGAAGTACTTCTTCACTCAGAAGGAGTTGAACATGAGGCAGAGGAGGTGGCTCGAGTTGGTGAAAGACTACGACTGCGAGATCCTATACCACCCAGGCAAAGCAAATGTAGTGGCTGACGCGCTGAGTAGGAAAGTGGCACATTCAGCAGCGCTAATCACCAAGCAGACCCCCTTACTCAGAGATTTTGAGAGAGCCGAGATTGCAGTCTCAGTAGGTGAGGTTACCGCACAGTTGGCTCAGTTGACAGTTCAGCCAACCTTGAGGCAAAAGATCATTGCTGCTCAGCTGAATGATCCTTACTTGGCAGAGAAGCGTCGCGTGGTAGAGACAGAGGAAGGTGAAGACTTCTCCATATCCTCTGACGGTGGCCTTATGTTTGAGGGACGCCTGTGTGTGCCGGAAGACAGCGCAGTTAAGACGGAGCTTTTGACTGAGGCCCACAGTTCCCCGTTTACCATGCACCCTGGGAGTACGAAGATGTACCAGGACTTAAGGAGTGTCTATTGGTGGAGGGGCATGAAGAGGGATGTGGCAGACTTTGTCAGTAGATGCTTGGTGTGCCCAACAGGTGAAGGCACCTAG

mRNA sequence

ATGAAGGCTAGTAAACTGCTCAGCCAGGGAACTTGGGGCATCTTGGCAAGCGTAGTGGATATTAGAGAGCCAGAAGTTTCCCTATCGTCTGAACCAGTGGTGAGGGAGTACCCCGATGTTTTCCCAGACGAACTCCCAGGACTTCCGCCTCCCAGAGAAGTAGACTTCGCCATCGAGTTAGAGCCGGGCACTGCCCCTATCTCGAGGGCCCCTTACAGAATGGCTCCAGCCGAGCTAAAGGAGTTGAAGGTCCGGTTACAGGAGTTGCTGGACAAAGGCTTCATCCGGCCCAGTGTGTCGCCTTGGGGAGCCCCAGTATTGTTCGTGAAGAAGAAGGATGGGTCGATGCGCCTTTGTATTGACTACCGAGAGCTGAACAAGGTGACAGTCAAAAACCGCTACCCCTTGCCCAGAATTGACGACCTGTTCGATCAGTTGCAGGGAGCCACTGTCTTTTCCAAGATCGACCTGCGATCAGGCTATCACCAGTTGAGGATTAGGGACGGTGACATTCCCAAGACGGCCTTTCGATCGAGGTACGGACATTACGAATTCGTTGTGATGTCTTTCGGCTTGACTAACGCTCCTGCAGTATTCATGGATTTGATGAACAGGGTGTTTAAGGACTTTCTAGACTCGTTCGTCATAGTCTTCATTGACGACATCCTCATTTACTCAAAAACTGAGGCGGAGCACGAGAAGCACTTACACCAGGTTTTGGAGACCCTTCGAGCCAACAAGTTGTATGCCAAATTCTCCAAGTGTGAATTCTGGTTAAGGAAGGTGACGTTTCTTGGCCACGTGGTTTCCAGTGAGGGAGTTTCAGTAGATCCCGCAAAGATTGAAGCGGTGACCAACTGGACTCGACCGTCCACGGTTAGTGAAATTCGAAGTTTTCTGGGCTTGGCAGGTTACTACAGGAGGTTCGTGGAAGACTTCTCACGTATAGCCAGCCCGTTGACCCAGTTGACCAGAAAGGGAACCCCTTTTGTCTGGAGCCCAGCATGCGAGAGGAGCTTTCAGGAGCTCAAACAGAAGCTAGTGACTGCACCGGTCCTGACAGTGCCCGATGGTTCGGGAAACTTTGTAATTTATAGTGACGCCTCCAAGAAGGGACTGGGCTGTGTCCTGATGCAGCAAGGTAAGGTAGTTGCTTATGCCTCCCGCCAGTTGAAGATCCATGAGCAGAACTACCCTACCCATGACTTGGAGTTGGCAGCTGTAGTCTTTGCACTGAAGATATGGAGGCACCATCTGTACGGTGAGAAGATTCAGATTTACACCGACCATAAGAGCCTGAAGTACTTCTTCACTCAGAAGGAGTTGAACATGAGGCAGAGGAGGTGGCTCGAGTTGGTGAAAGACTACGACTGCGAGATCCTATACCACCCAGGCAAAGCAAATGTAGTGGCTGACGCGCTGAGTAGGAAAGTGGCACATTCAGCAGCGCTAATCACCAAGCAGACCCCCTTACTCAGAGATTTTGAGAGAGCCGAGATTGCAGTCTCAGTAGGTGAGGTTACCGCACAGTTGGCTCAGTTGACAGTTCAGCCAACCTTGAGGCAAAAGATCATTGCTGCTCAGCTGAATGATCCTTACTTGGCAGAGAAGCGTCGCGTGGTAGAGACAGAGGAAGGTGAAGACTTCTCCATATCCTCTGACGGTGGCCTTATGTTTGAGGGACGCCTGTGTGTGCCGGAAGACAGCGCAGTTAAGACGGAGCTTTTGACTGAGGCCCACAGTTCCCCGTTTACCATGCACCCTGGGAGTACGAAGATGTACCAGGACTTAAGGAGTGTCTATTGGTGGAGGGGCATGAAGAGGGATGTGGCAGACTTTGTCAGTAGATGCTTGGTGTGCCCAACAGGTGAAGGCACCTAG

Coding sequence (CDS)

ATGAAGGCTAGTAAACTGCTCAGCCAGGGAACTTGGGGCATCTTGGCAAGCGTAGTGGATATTAGAGAGCCAGAAGTTTCCCTATCGTCTGAACCAGTGGTGAGGGAGTACCCCGATGTTTTCCCAGACGAACTCCCAGGACTTCCGCCTCCCAGAGAAGTAGACTTCGCCATCGAGTTAGAGCCGGGCACTGCCCCTATCTCGAGGGCCCCTTACAGAATGGCTCCAGCCGAGCTAAAGGAGTTGAAGGTCCGGTTACAGGAGTTGCTGGACAAAGGCTTCATCCGGCCCAGTGTGTCGCCTTGGGGAGCCCCAGTATTGTTCGTGAAGAAGAAGGATGGGTCGATGCGCCTTTGTATTGACTACCGAGAGCTGAACAAGGTGACAGTCAAAAACCGCTACCCCTTGCCCAGAATTGACGACCTGTTCGATCAGTTGCAGGGAGCCACTGTCTTTTCCAAGATCGACCTGCGATCAGGCTATCACCAGTTGAGGATTAGGGACGGTGACATTCCCAAGACGGCCTTTCGATCGAGGTACGGACATTACGAATTCGTTGTGATGTCTTTCGGCTTGACTAACGCTCCTGCAGTATTCATGGATTTGATGAACAGGGTGTTTAAGGACTTTCTAGACTCGTTCGTCATAGTCTTCATTGACGACATCCTCATTTACTCAAAAACTGAGGCGGAGCACGAGAAGCACTTACACCAGGTTTTGGAGACCCTTCGAGCCAACAAGTTGTATGCCAAATTCTCCAAGTGTGAATTCTGGTTAAGGAAGGTGACGTTTCTTGGCCACGTGGTTTCCAGTGAGGGAGTTTCAGTAGATCCCGCAAAGATTGAAGCGGTGACCAACTGGACTCGACCGTCCACGGTTAGTGAAATTCGAAGTTTTCTGGGCTTGGCAGGTTACTACAGGAGGTTCGTGGAAGACTTCTCACGTATAGCCAGCCCGTTGACCCAGTTGACCAGAAAGGGAACCCCTTTTGTCTGGAGCCCAGCATGCGAGAGGAGCTTTCAGGAGCTCAAACAGAAGCTAGTGACTGCACCGGTCCTGACAGTGCCCGATGGTTCGGGAAACTTTGTAATTTATAGTGACGCCTCCAAGAAGGGACTGGGCTGTGTCCTGATGCAGCAAGGTAAGGTAGTTGCTTATGCCTCCCGCCAGTTGAAGATCCATGAGCAGAACTACCCTACCCATGACTTGGAGTTGGCAGCTGTAGTCTTTGCACTGAAGATATGGAGGCACCATCTGTACGGTGAGAAGATTCAGATTTACACCGACCATAAGAGCCTGAAGTACTTCTTCACTCAGAAGGAGTTGAACATGAGGCAGAGGAGGTGGCTCGAGTTGGTGAAAGACTACGACTGCGAGATCCTATACCACCCAGGCAAAGCAAATGTAGTGGCTGACGCGCTGAGTAGGAAAGTGGCACATTCAGCAGCGCTAATCACCAAGCAGACCCCCTTACTCAGAGATTTTGAGAGAGCCGAGATTGCAGTCTCAGTAGGTGAGGTTACCGCACAGTTGGCTCAGTTGACAGTTCAGCCAACCTTGAGGCAAAAGATCATTGCTGCTCAGCTGAATGATCCTTACTTGGCAGAGAAGCGTCGCGTGGTAGAGACAGAGGAAGGTGAAGACTTCTCCATATCCTCTGACGGTGGCCTTATGTTTGAGGGACGCCTGTGTGTGCCGGAAGACAGCGCAGTTAAGACGGAGCTTTTGACTGAGGCCCACAGTTCCCCGTTTACCATGCACCCTGGGAGTACGAAGATGTACCAGGACTTAAGGAGTGTCTATTGGTGGAGGGGCATGAAGAGGGATGTGGCAGACTTTGTCAGTAGATGCTTGGTGTGCCCAACAGGTGAAGGCACCTAG

Protein sequence

MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVRLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEKHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHHLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVVETEEGEDFSISSDGGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCPTGEGT

Homology

[Close]

BLAST of Cmc11g0287911 vs. NCBI nr
Match: KAA0053301.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1234.6 bits (3193), Expect = 0.0e+00
Identity = 613/620 (98.87%), Postives = 618/620 (99.68%), Query Frame = 0


Query: 1   MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL 60
           MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL
Sbjct: 1   MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL 60

Query: 61  EPGTAPISRAPYRMAPAELKELKVRLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 120
           EPGTAPISRAPYRMAPAELKELKV+LQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI
Sbjct: 61  EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 120

Query: 121 DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRY 180
           DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRY
Sbjct: 121 DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRY 180

Query: 181 GHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEKHLHQVL 240
           GHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHE+HLHQVL
Sbjct: 181 GHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVL 240

Query: 241 ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFL 300
           ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFL
Sbjct: 241 ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFL 300

Query: 301 GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSG 360
           GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSG
Sbjct: 301 GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSG 360

Query: 361 NFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHHLY 420
           NFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRH+LY
Sbjct: 361 NFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLY 420

Query: 421 GEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAH 480
            EKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAH
Sbjct: 421 DEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAH 480

Query: 481 SAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRV 540
           SAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRV
Sbjct: 481 SAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRV 540

Query: 541 VETEEGEDFSISSDGGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSV 600
           VETE+GEDFSISSDGGLMFE RLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSV
Sbjct: 541 VETEQGEDFSISSDGGLMFEERLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSV 600

Query: 601 YWWRGMKRDVADFVSRCLVC 621
           YWWRGMKRDVADFVS+CLVC
Sbjct: 601 YWWRGMKRDVADFVSKCLVC 620

[Close]

BLAST of Cmc11g0287911 vs. NCBI nr
Match: TYK20443.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1233.8 bits (3191), Expect = 0.0e+00
Identity = 612/620 (98.71%), Postives = 618/620 (99.68%), Query Frame = 0


Query: 1    MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL 60
            MKASKLLSQGTWGILASVVD+REPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL
Sbjct: 862  MKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL 921

Query: 61   EPGTAPISRAPYRMAPAELKELKVRLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 120
            EPGTAPISRAPYRMAPAELKELKV+LQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI
Sbjct: 922  EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 981

Query: 121  DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRY 180
            DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRY
Sbjct: 982  DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRY 1041

Query: 181  GHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEKHLHQVL 240
            GHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHE+HLHQVL
Sbjct: 1042 GHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVL 1101

Query: 241  ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFL 300
            ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFL
Sbjct: 1102 ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFL 1161

Query: 301  GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSG 360
            GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSG
Sbjct: 1162 GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSG 1221

Query: 361  NFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHHLY 420
            NFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRH+LY
Sbjct: 1222 NFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLY 1281

Query: 421  GEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAH 480
            GEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAH
Sbjct: 1282 GEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAH 1341

Query: 481  SAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRV 540
            SAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQL+DPYLAEKRRV
Sbjct: 1342 SAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLDDPYLAEKRRV 1401

Query: 541  VETEEGEDFSISSDGGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSV 600
            VETE+GE FSISSD GLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSV
Sbjct: 1402 VETEQGEGFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSV 1461

Query: 601  YWWRGMKRDVADFVSRCLVC 621
            YWWRGMKRDVADFVSRCLVC
Sbjct: 1462 YWWRGMKRDVADFVSRCLVC 1481

[Close]

BLAST of Cmc11g0287911 vs. NCBI nr
Match: KAA0025998.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1233.8 bits (3191), Expect = 0.0e+00
Identity = 612/620 (98.71%), Postives = 618/620 (99.68%), Query Frame = 0


Query: 1    MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL 60
            MKASKLLSQGTWGILASVVD+REPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL
Sbjct: 526  MKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL 585

Query: 61   EPGTAPISRAPYRMAPAELKELKVRLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 120
            EPGTAPISRAPYRMAPAELKELKV+LQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI
Sbjct: 586  EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 645

Query: 121  DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRY 180
            DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRY
Sbjct: 646  DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRY 705

Query: 181  GHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEKHLHQVL 240
            GHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHE+HLHQVL
Sbjct: 706  GHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVL 765

Query: 241  ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFL 300
            ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFL
Sbjct: 766  ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFL 825

Query: 301  GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSG 360
            GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSG
Sbjct: 826  GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSG 885

Query: 361  NFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHHLY 420
            NFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRH+LY
Sbjct: 886  NFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLY 945

Query: 421  GEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAH 480
            GEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAH
Sbjct: 946  GEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAH 1005

Query: 481  SAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRV 540
            SAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQL+DPYLAEKRRV
Sbjct: 1006 SAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLDDPYLAEKRRV 1065

Query: 541  VETEEGEDFSISSDGGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSV 600
            VETE+GE FSISSD GLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSV
Sbjct: 1066 VETEQGEGFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSV 1125

Query: 601  YWWRGMKRDVADFVSRCLVC 621
            YWWRGMKRDVADFVSRCLVC
Sbjct: 1126 YWWRGMKRDVADFVSRCLVC 1145

[Close]

BLAST of Cmc11g0287911 vs. NCBI nr
Match: TYK01576.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1233.8 bits (3191), Expect = 0.0e+00
Identity = 612/620 (98.71%), Postives = 618/620 (99.68%), Query Frame = 0


Query: 1    MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL 60
            MKASKLLSQGTWGILASVVD+REPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL
Sbjct: 863  MKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL 922

Query: 61   EPGTAPISRAPYRMAPAELKELKVRLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 120
            EPGTAPISRAPYRMAPAELKELKV+LQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI
Sbjct: 923  EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 982

Query: 121  DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRY 180
            DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRY
Sbjct: 983  DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRY 1042

Query: 181  GHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEKHLHQVL 240
            GHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHE+HLHQVL
Sbjct: 1043 GHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVL 1102

Query: 241  ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFL 300
            ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFL
Sbjct: 1103 ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFL 1162

Query: 301  GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSG 360
            GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSG
Sbjct: 1163 GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSG 1222

Query: 361  NFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHHLY 420
            NFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRH+LY
Sbjct: 1223 NFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLY 1282

Query: 421  GEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAH 480
            GEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAH
Sbjct: 1283 GEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAH 1342

Query: 481  SAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRV 540
            SAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQL+DPYLAEKRRV
Sbjct: 1343 SAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLDDPYLAEKRRV 1402

Query: 541  VETEEGEDFSISSDGGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSV 600
            VETE+GE FSISSD GLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSV
Sbjct: 1403 VETEQGEGFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSV 1462

Query: 601  YWWRGMKRDVADFVSRCLVC 621
            YWWRGMKRDVADFVSRCLVC
Sbjct: 1463 YWWRGMKRDVADFVSRCLVC 1482

[Close]

BLAST of Cmc11g0287911 vs. NCBI nr
Match: TYK06888.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1233.8 bits (3191), Expect = 0.0e+00
Identity = 612/620 (98.71%), Postives = 618/620 (99.68%), Query Frame = 0


Query: 1    MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL 60
            MKASKLLSQGTWGILASVVD+REPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL
Sbjct: 481  MKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL 540

Query: 61   EPGTAPISRAPYRMAPAELKELKVRLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 120
            EPGTAPISRAPYRMAPAELKELKV+LQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI
Sbjct: 541  EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 600

Query: 121  DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRY 180
            DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRY
Sbjct: 601  DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRY 660

Query: 181  GHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEKHLHQVL 240
            GHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHE+HLHQVL
Sbjct: 661  GHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVL 720

Query: 241  ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFL 300
            ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFL
Sbjct: 721  ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFL 780

Query: 301  GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSG 360
            GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSG
Sbjct: 781  GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSG 840

Query: 361  NFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHHLY 420
            NFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRH+LY
Sbjct: 841  NFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLY 900

Query: 421  GEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAH 480
            GEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAH
Sbjct: 901  GEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAH 960

Query: 481  SAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRV 540
            SAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQL+DPYLAEKRRV
Sbjct: 961  SAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLDDPYLAEKRRV 1020

Query: 541  VETEEGEDFSISSDGGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSV 600
            VETE+GE FSISSD GLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSV
Sbjct: 1021 VETEQGEGFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSV 1080

Query: 601  YWWRGMKRDVADFVSRCLVC 621
            YWWRGMKRDVADFVSRCLVC
Sbjct: 1081 YWWRGMKRDVADFVSRCLVC 1100

[Close]

BLAST of Cmc11g0287911 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 331.3 bits (848), Expect = 2.4e-89
Identity = 193/618 (31.23%), Postives = 330/618 (53.40%), Query Frame = 0


Query: 21  IREPEVSLSSEPVVREYPDVFPD-ELPGLPPP-REVDFAIELEPGTAPISRAPYRMAPAE 80
           ++EPE+      + +E+ D+  +     LP P + ++F +EL      +    Y + P +
Sbjct: 369 VKEPEL----PDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQENYRLPIRNYPLPPGK 428

Query: 81  LKELKVRLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPR 140
           ++ +   + + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP 
Sbjct: 429 MQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPL 488

Query: 141 IDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAV 200
           I+ L  ++QG+T+F+K+DL+S YH +R+R GD  K AFR   G +E++VM +G++ APA 
Sbjct: 489 IEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAH 548

Query: 201 FMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEKHLHQVLETLRANKLYAKFSKCEFW 260
           F   +N +  +  +S V+ ++DDILI+SK+E+EH KH+  VL+ L+   L    +KCEF 
Sbjct: 549 FQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFH 608

Query: 261 LRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRIAS 320
             +V F+G+ +S +G +     I+ V  W +P    E+R FLG   Y R+F+   S++  
Sbjct: 609 QSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTH 668

Query: 321 PLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLM 380
           PL  L +K   + W+P   ++ + +KQ LV+ PVL   D S   ++ +DAS   +G VL 
Sbjct: 669 PLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLS 728

Query: 381 QQGK-----VVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHHLYG--EKIQIYTDHK 440
           Q+        V Y S ++   + NY   D E+ A++ +LK WRH+L    E  +I TDH+
Sbjct: 729 QKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHR 788

Query: 441 SLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQT 500
           +L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR       ++ +  
Sbjct: 789 NLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR-------IVDETE 848

Query: 501 PLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLA-----EKRRVVETE 560
           P+ +D E   I          + Q+++    + +++    ND  L      E +RV E  
Sbjct: 849 PIPKDSEDNSINF--------VNQISITDDFKNQVVTEYTNDTKLLNLLNNEDKRVEENI 908

Query: 561 EGEDFSISSDGGLMFEGR--LCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYW 620
           + +D       GL+   +  + +P D+ +   ++ + H     +HPG   +   +   + 
Sbjct: 909 QLKD-------GLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFT 960

[Close]

BLAST of Cmc11g0287911 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 331.3 bits (848), Expect = 2.4e-89
Identity = 193/618 (31.23%), Postives = 330/618 (53.40%), Query Frame = 0


Query: 21  IREPEVSLSSEPVVREYPDVFPD-ELPGLPPP-REVDFAIELEPGTAPISRAPYRMAPAE 80
           ++EPE+      + +E+ D+  +     LP P + ++F +EL      +    Y + P +
Sbjct: 369 VKEPEL----PDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQENYRLPIRNYPLPPGK 428

Query: 81  LKELKVRLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPR 140
           ++ +   + + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP 
Sbjct: 429 MQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPL 488

Query: 141 IDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAV 200
           I+ L  ++QG+T+F+K+DL+S YH +R+R GD  K AFR   G +E++VM +G++ APA 
Sbjct: 489 IEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAH 548

Query: 201 FMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEKHLHQVLETLRANKLYAKFSKCEFW 260
           F   +N +  +  +S V+ ++DDILI+SK+E+EH KH+  VL+ L+   L    +KCEF 
Sbjct: 549 FQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFH 608

Query: 261 LRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRIAS 320
             +V F+G+ +S +G +     I+ V  W +P    E+R FLG   Y R+F+   S++  
Sbjct: 609 QSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTH 668

Query: 321 PLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLM 380
           PL  L +K   + W+P   ++ + +KQ LV+ PVL   D S   ++ +DAS   +G VL 
Sbjct: 669 PLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLS 728

Query: 381 QQGK-----VVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHHLYG--EKIQIYTDHK 440
           Q+        V Y S ++   + NY   D E+ A++ +LK WRH+L    E  +I TDH+
Sbjct: 729 QKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHR 788

Query: 441 SLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQT 500
           +L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR       ++ +  
Sbjct: 789 NLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR-------IVDETE 848

Query: 501 PLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLA-----EKRRVVETE 560
           P+ +D E   I          + Q+++    + +++    ND  L      E +RV E  
Sbjct: 849 PIPKDSEDNSINF--------VNQISITDDFKNQVVTEYTNDTKLLNLLNNEDKRVEENI 908

Query: 561 EGEDFSISSDGGLMFEGR--LCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYW 620
           + +D       GL+   +  + +P D+ +   ++ + H     +HPG   +   +   + 
Sbjct: 909 QLKD-------GLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFT 960

[Close]

BLAST of Cmc11g0287911 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 331.3 bits (848), Expect = 2.4e-89
Identity = 193/618 (31.23%), Postives = 330/618 (53.40%), Query Frame = 0


Query: 21  IREPEVSLSSEPVVREYPDVFPD-ELPGLPPP-REVDFAIELEPGTAPISRAPYRMAPAE 80
           ++EPE+      + +E+ D+  +     LP P + ++F +EL      +    Y + P +
Sbjct: 369 VKEPEL----PDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQENYRLPIRNYPLPPGK 428

Query: 81  LKELKVRLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPR 140
           ++ +   + + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP 
Sbjct: 429 MQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPL 488

Query: 141 IDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAV 200
           I+ L  ++QG+T+F+K+DL+S YH +R+R GD  K AFR   G +E++VM +G++ APA 
Sbjct: 489 IEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAH 548

Query: 201 FMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEKHLHQVLETLRANKLYAKFSKCEFW 260
           F   +N +  +  +S V+ ++DDILI+SK+E+EH KH+  VL+ L+   L    +KCEF 
Sbjct: 549 FQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFH 608

Query: 261 LRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRIAS 320
             +V F+G+ +S +G +     I+ V  W +P    E+R FLG   Y R+F+   S++  
Sbjct: 609 QSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTH 668

Query: 321 PLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLM 380
           PL  L +K   + W+P   ++ + +KQ LV+ PVL   D S   ++ +DAS   +G VL 
Sbjct: 669 PLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLS 728

Query: 381 QQGK-----VVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHHLYG--EKIQIYTDHK 440
           Q+        V Y S ++   + NY   D E+ A++ +LK WRH+L    E  +I TDH+
Sbjct: 729 QKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHR 788

Query: 441 SLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQT 500
           +L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR       ++ +  
Sbjct: 789 NLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR-------IVDETE 848

Query: 501 PLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLA-----EKRRVVETE 560
           P+ +D E   I          + Q+++    + +++    ND  L      E +RV E  
Sbjct: 849 PIPKDSEDNSINF--------VNQISITDDFKNQVVTEYTNDTKLLNLLNNEDKRVEENI 908

Query: 561 EGEDFSISSDGGLMFEGR--LCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYW 620
           + +D       GL+   +  + +P D+ +   ++ + H     +HPG   +   +   + 
Sbjct: 909 QLKD-------GLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFT 960

[Close]

BLAST of Cmc11g0287911 vs. ExPASy Swiss-Prot
Match: P0CT36 (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-3 PE=1 SV=1)

HSP 1 Score: 331.3 bits (848), Expect = 2.4e-89
Identity = 193/618 (31.23%), Postives = 330/618 (53.40%), Query Frame = 0


Query: 21  IREPEVSLSSEPVVREYPDVFPD-ELPGLPPP-REVDFAIELEPGTAPISRAPYRMAPAE 80
           ++EPE+      + +E+ D+  +     LP P + ++F +EL      +    Y + P +
Sbjct: 369 VKEPEL----PDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQENYRLPIRNYPLPPGK 428

Query: 81  LKELKVRLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPR 140
           ++ +   + + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP 
Sbjct: 429 MQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPL 488

Query: 141 IDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAV 200
           I+ L  ++QG+T+F+K+DL+S YH +R+R GD  K AFR   G +E++VM +G++ APA 
Sbjct: 489 IEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAH 548

Query: 201 FMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEKHLHQVLETLRANKLYAKFSKCEFW 260
           F   +N +  +  +S V+ ++DDILI+SK+E+EH KH+  VL+ L+   L    +KCEF 
Sbjct: 549 FQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFH 608

Query: 261 LRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRIAS 320
             +V F+G+ +S +G +     I+ V  W +P    E+R FLG   Y R+F+   S++  
Sbjct: 609 QSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTH 668

Query: 321 PLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLM 380
           PL  L +K   + W+P   ++ + +KQ LV+ PVL   D S   ++ +DAS   +G VL 
Sbjct: 669 PLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLS 728

Query: 381 QQGK-----VVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHHLYG--EKIQIYTDHK 440
           Q+        V Y S ++   + NY   D E+ A++ +LK WRH+L    E  +I TDH+
Sbjct: 729 QKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHR 788

Query: 441 SLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQT 500
           +L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR       ++ +  
Sbjct: 789 NLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR-------IVDETE 848

Query: 501 PLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLA-----EKRRVVETE 560
           P+ +D E   I          + Q+++    + +++    ND  L      E +RV E  
Sbjct: 849 PIPKDSEDNSINF--------VNQISITDDFKNQVVTEYTNDTKLLNLLNNEDKRVEENI 908

Query: 561 EGEDFSISSDGGLMFEGR--LCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYW 620
           + +D       GL+   +  + +P D+ +   ++ + H     +HPG   +   +   + 
Sbjct: 909 QLKD-------GLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFT 960

[Close]

BLAST of Cmc11g0287911 vs. ExPASy Swiss-Prot
Match: P0CT37 (Transposon Tf2-4 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-4 PE=3 SV=1)

HSP 1 Score: 331.3 bits (848), Expect = 2.4e-89
Identity = 193/618 (31.23%), Postives = 330/618 (53.40%), Query Frame = 0


Query: 21  IREPEVSLSSEPVVREYPDVFPD-ELPGLPPP-REVDFAIELEPGTAPISRAPYRMAPAE 80
           ++EPE+      + +E+ D+  +     LP P + ++F +EL      +    Y + P +
Sbjct: 369 VKEPEL----PDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQENYRLPIRNYPLPPGK 428

Query: 81  LKELKVRLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPR 140
           ++ +   + + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP 
Sbjct: 429 MQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPL 488

Query: 141 IDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVVMSFGLTNAPAV 200
           I+ L  ++QG+T+F+K+DL+S YH +R+R GD  K AFR   G +E++VM +G++ APA 
Sbjct: 489 IEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAH 548

Query: 201 FMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEKHLHQVLETLRANKLYAKFSKCEFW 260
           F   +N +  +  +S V+ ++DDILI+SK+E+EH KH+  VL+ L+   L    +KCEF 
Sbjct: 549 FQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFH 608

Query: 261 LRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFLGLAGYYRRFVEDFSRIAS 320
             +V F+G+ +S +G +     I+ V  W +P    E+R FLG   Y R+F+   S++  
Sbjct: 609 QSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTH 668

Query: 321 PLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLM 380
           PL  L +K   + W+P   ++ + +KQ LV+ PVL   D S   ++ +DAS   +G VL 
Sbjct: 669 PLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLS 728

Query: 381 QQGK-----VVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHHLYG--EKIQIYTDHK 440
           Q+        V Y S ++   + NY   D E+ A++ +LK WRH+L    E  +I TDH+
Sbjct: 729 QKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHR 788

Query: 441 SLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQT 500
           +L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR       ++ +  
Sbjct: 789 NLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR-------IVDETE 848

Query: 501 PLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLA-----EKRRVVETE 560
           P+ +D E   I          + Q+++    + +++    ND  L      E +RV E  
Sbjct: 849 PIPKDSEDNSINF--------VNQISITDDFKNQVVTEYTNDTKLLNLLNNEDKRVEENI 908

Query: 561 EGEDFSISSDGGLMFEGR--LCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYW 620
           + +D       GL+   +  + +P D+ +   ++ + H     +HPG   +   +   + 
Sbjct: 909 QLKD-------GLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFT 960

[Close]

BLAST of Cmc11g0287911 vs. ExPASy TrEMBL
Match: A0A5A7UIB4 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold102G001140 PE=4 SV=1)

HSP 1 Score: 1234.6 bits (3193), Expect = 0.0e+00
Identity = 613/620 (98.87%), Postives = 618/620 (99.68%), Query Frame = 0


Query: 1   MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL 60
           MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL
Sbjct: 1   MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL 60

Query: 61  EPGTAPISRAPYRMAPAELKELKVRLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 120
           EPGTAPISRAPYRMAPAELKELKV+LQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI
Sbjct: 61  EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 120

Query: 121 DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRY 180
           DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRY
Sbjct: 121 DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRY 180

Query: 181 GHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEKHLHQVL 240
           GHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHE+HLHQVL
Sbjct: 181 GHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVL 240

Query: 241 ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFL 300
           ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFL
Sbjct: 241 ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFL 300

Query: 301 GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSG 360
           GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSG
Sbjct: 301 GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSG 360

Query: 361 NFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHHLY 420
           NFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRH+LY
Sbjct: 361 NFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLY 420

Query: 421 GEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAH 480
            EKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAH
Sbjct: 421 DEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAH 480

Query: 481 SAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRV 540
           SAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRV
Sbjct: 481 SAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRV 540

Query: 541 VETEEGEDFSISSDGGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSV 600
           VETE+GEDFSISSDGGLMFE RLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSV
Sbjct: 541 VETEQGEDFSISSDGGLMFEERLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSV 600

Query: 601 YWWRGMKRDVADFVSRCLVC 621
           YWWRGMKRDVADFVS+CLVC
Sbjct: 601 YWWRGMKRDVADFVSKCLVC 620

[Close]

BLAST of Cmc11g0287911 vs. ExPASy TrEMBL
Match: A0A5D3BTN0 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G001560 PE=4 SV=1)

HSP 1 Score: 1233.8 bits (3191), Expect = 0.0e+00
Identity = 612/620 (98.71%), Postives = 618/620 (99.68%), Query Frame = 0


Query: 1    MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL 60
            MKASKLLSQGTWGILASVVD+REPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL
Sbjct: 863  MKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL 922

Query: 61   EPGTAPISRAPYRMAPAELKELKVRLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 120
            EPGTAPISRAPYRMAPAELKELKV+LQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI
Sbjct: 923  EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 982

Query: 121  DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRY 180
            DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRY
Sbjct: 983  DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRY 1042

Query: 181  GHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEKHLHQVL 240
            GHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHE+HLHQVL
Sbjct: 1043 GHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVL 1102

Query: 241  ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFL 300
            ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFL
Sbjct: 1103 ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFL 1162

Query: 301  GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSG 360
            GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSG
Sbjct: 1163 GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSG 1222

Query: 361  NFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHHLY 420
            NFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRH+LY
Sbjct: 1223 NFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLY 1282

Query: 421  GEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAH 480
            GEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAH
Sbjct: 1283 GEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAH 1342

Query: 481  SAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRV 540
            SAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQL+DPYLAEKRRV
Sbjct: 1343 SAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLDDPYLAEKRRV 1402

Query: 541  VETEEGEDFSISSDGGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSV 600
            VETE+GE FSISSD GLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSV
Sbjct: 1403 VETEQGEGFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSV 1462

Query: 601  YWWRGMKRDVADFVSRCLVC 621
            YWWRGMKRDVADFVSRCLVC
Sbjct: 1463 YWWRGMKRDVADFVSRCLVC 1482

[Close]

BLAST of Cmc11g0287911 vs. ExPASy TrEMBL
Match: A0A5A7SIJ5 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold34G003210 PE=4 SV=1)

HSP 1 Score: 1233.8 bits (3191), Expect = 0.0e+00
Identity = 612/620 (98.71%), Postives = 618/620 (99.68%), Query Frame = 0


Query: 1    MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL 60
            MKASKLLSQGTWGILASVVD+REPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL
Sbjct: 526  MKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL 585

Query: 61   EPGTAPISRAPYRMAPAELKELKVRLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 120
            EPGTAPISRAPYRMAPAELKELKV+LQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI
Sbjct: 586  EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 645

Query: 121  DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRY 180
            DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRY
Sbjct: 646  DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRY 705

Query: 181  GHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEKHLHQVL 240
            GHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHE+HLHQVL
Sbjct: 706  GHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVL 765

Query: 241  ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFL 300
            ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFL
Sbjct: 766  ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFL 825

Query: 301  GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSG 360
            GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSG
Sbjct: 826  GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSG 885

Query: 361  NFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHHLY 420
            NFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRH+LY
Sbjct: 886  NFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLY 945

Query: 421  GEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAH 480
            GEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAH
Sbjct: 946  GEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAH 1005

Query: 481  SAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRV 540
            SAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQL+DPYLAEKRRV
Sbjct: 1006 SAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLDDPYLAEKRRV 1065

Query: 541  VETEEGEDFSISSDGGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSV 600
            VETE+GE FSISSD GLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSV
Sbjct: 1066 VETEQGEGFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSV 1125

Query: 601  YWWRGMKRDVADFVSRCLVC 621
            YWWRGMKRDVADFVSRCLVC
Sbjct: 1126 YWWRGMKRDVADFVSRCLVC 1145

[Close]

BLAST of Cmc11g0287911 vs. ExPASy TrEMBL
Match: A0A5D3C6W3 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G001930 PE=4 SV=1)

HSP 1 Score: 1233.8 bits (3191), Expect = 0.0e+00
Identity = 612/620 (98.71%), Postives = 618/620 (99.68%), Query Frame = 0


Query: 1    MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL 60
            MKASKLLSQGTWGILASVVD+REPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL
Sbjct: 481  MKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL 540

Query: 61   EPGTAPISRAPYRMAPAELKELKVRLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 120
            EPGTAPISRAPYRMAPAELKELKV+LQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI
Sbjct: 541  EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 600

Query: 121  DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRY 180
            DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRY
Sbjct: 601  DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRY 660

Query: 181  GHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEKHLHQVL 240
            GHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHE+HLHQVL
Sbjct: 661  GHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVL 720

Query: 241  ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFL 300
            ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFL
Sbjct: 721  ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFL 780

Query: 301  GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSG 360
            GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSG
Sbjct: 781  GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSG 840

Query: 361  NFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHHLY 420
            NFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRH+LY
Sbjct: 841  NFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLY 900

Query: 421  GEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAH 480
            GEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAH
Sbjct: 901  GEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAH 960

Query: 481  SAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRV 540
            SAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQL+DPYLAEKRRV
Sbjct: 961  SAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLDDPYLAEKRRV 1020

Query: 541  VETEEGEDFSISSDGGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSV 600
            VETE+GE FSISSD GLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSV
Sbjct: 1021 VETEQGEGFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSV 1080

Query: 601  YWWRGMKRDVADFVSRCLVC 621
            YWWRGMKRDVADFVSRCLVC
Sbjct: 1081 YWWRGMKRDVADFVSRCLVC 1100

[Close]

BLAST of Cmc11g0287911 vs. ExPASy TrEMBL
Match: A0A5A7V2A0 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold154G001000 PE=4 SV=1)

HSP 1 Score: 1233.8 bits (3191), Expect = 0.0e+00
Identity = 612/620 (98.71%), Postives = 618/620 (99.68%), Query Frame = 0


Query: 1    MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL 60
            MKASKLLSQGTWGILASVVD+REPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL
Sbjct: 909  MKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL 968

Query: 61   EPGTAPISRAPYRMAPAELKELKVRLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 120
            EPGTAPISRAPYRMAPAELKELKV+LQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI
Sbjct: 969  EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 1028

Query: 121  DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRY 180
            DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRY
Sbjct: 1029 DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRY 1088

Query: 181  GHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEKHLHQVL 240
            GHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHE+HLHQVL
Sbjct: 1089 GHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVL 1148

Query: 241  ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFL 300
            ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFL
Sbjct: 1149 ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFL 1208

Query: 301  GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSG 360
            GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSG
Sbjct: 1209 GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSG 1268

Query: 361  NFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHHLY 420
            NFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRH+LY
Sbjct: 1269 NFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLY 1328

Query: 421  GEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAH 480
            GEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAH
Sbjct: 1329 GEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAH 1388

Query: 481  SAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRV 540
            SAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQL+DPYLAEKRRV
Sbjct: 1389 SAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLDDPYLAEKRRV 1448

Query: 541  VETEEGEDFSISSDGGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSV 600
            VETE+GE FSISSD GLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSV
Sbjct: 1449 VETEQGEGFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSV 1508

Query: 601  YWWRGMKRDVADFVSRCLVC 621
            YWWRGMKRDVADFVSRCLVC
Sbjct: 1509 YWWRGMKRDVADFVSRCLVC 1528

[Close]

BLAST of Cmc11g0287911 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 116.3 bits (290), Expect = 8.8e-26
Identity = 54/125 (43.20%), Postives = 78/125 (62.40%), Query Frame = 0


Query: 235 HLHQVLETLRANKLYAKFSKCEFWLRKVTFLG--HVVSSEGVSVDPAKIEAVTNWTRPST 294
           HL  VL+    ++ YA   KC F   ++ +LG  H++S EGVS DPAK+EA+  W  P  
Sbjct: 3   HLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEPKN 62

Query: 295 VSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPV 354
            +E+R FLGL GYYRRFV+++ +I  PLT+L +K +   W+     +F+ LK  + T PV
Sbjct: 63  TTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKKNS-LKWTEMAALAFKALKGAVTTLPV 122

Query: 355 LTVPD 358
           L +PD
Sbjct: 123 LALPD 126

The following BLAST results are available for this feature:

BLAST of Cmc11g0287911 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0053301.1	0.0e+00	98.87	pol protein [Cucumis melo var. makuwa]	[more]
TYK20443.1	0.0e+00	98.71	pol protein [Cucumis melo var. makuwa]	[more]
KAA0025998.1	0.0e+00	98.71	pol protein [Cucumis melo var. makuwa]	[more]
TYK01576.1	0.0e+00	98.71	pol protein [Cucumis melo var. makuwa]	[more]
TYK06888.1	0.0e+00	98.71	pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc11g0287911 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0CT41	2.4e-89	31.23	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	2.4e-89	31.23	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT35	2.4e-89	31.23	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT36	2.4e-89	31.23	Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT37	2.4e-89	31.23	Transposon Tf2-4 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Cmc11g0287911 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UIB4	0.0e+00	98.87	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold102G001140 P...	[more]
A0A5D3BTN0	0.0e+00	98.71	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold45...	[more]
A0A5A7SIJ5	0.0e+00	98.71	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold34...	[more]
A0A5D3C6W3	0.0e+00	98.71	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13...	[more]
A0A5A7V2A0	0.0e+00	98.71	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold15...	[more]

BLAST of Cmc11g0287911 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00860.1	8.8e-26	43.20	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 279..366 e-value: 4.7E-32 score: 111.9
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 134..269 e-value: 7.2E-94 score: 315.0
None	No IPR available	GENE3D	1.10.340.70		coord: 533..622 e-value: 3.2E-17 score: 64.5
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 55..194 e-value: 7.2E-94 score: 315.0
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 1..488
None	No IPR available	PANTHER	PTHR24559:SF383	DNA/RNA POLYMERASES SUPERFAMILY PROTEIN	coord: 1..488
None	No IPR available	CDD	cd01647	RT_LTR	coord: 93..269 e-value: 7.41659E-99 score: 297.585
None	No IPR available	CDD	cd09274	RNase_HI_RT_Ty3	coord: 363..478 e-value: 4.58635E-58 score: 188.856
IPR041373	Reverse transcriptase, RNase H-like domain	PFAM	PF17917	RT_RNaseH	coord: 360..456 e-value: 1.1E-32 score: 112.5
IPR041588	Integrase zinc-binding domain	PFAM	PF17921	Integrase_H2C2	coord: 569..620 e-value: 4.6E-15 score: 55.4
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 367..488 e-value: 1.6E-5 score: 26.7
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 109..268 e-value: 8.2E-28 score: 97.4
IPR000477	Reverse transcriptase domain	PROSITE	PS50878	RT_POL	coord: 90..269 score: 10.351545
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 33..462

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc11g0287911.1	Cmc11g0287911.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding