Cmc11g0287571 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc11g0287571
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Actin-depolymerizing factor
Location	CMiso1.1chr11: 2513079 .. 2515403 (-)
RNA-Seq Expression	Cmc11g0287571
Synteny	Cmc11g0287571

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTCTCTCCATTTTCAGACCTCAAAGCTTTACAACGAGACCTCAACAATGGCGATGGCTTTCAAAATGGTAAAAACTAAACTAATTTCCTTAACTTTATCTCTTACAATCAATCTCCTCATTTTTACTTCTTTCTGATTCCATTTCTTTAACGCCGAATCTCAGGCAACCACAGGAATGTGGGTAAGCGACGAGTGTAAGAATTCATTCATGGAGATGAAATGGAAGAAAGTGCATAGGTATATCGTGTTTAAGATCGATGAAGGATCGAGATTAGTCACCGTCGATAAAGTAGGCGGTCCTGCCGAAAGCTACGATGATCTCACCGCTTCATTACCAAACGATGACTGTCGATACGCGGTCTTCGATTTCGATTTCGTTACTGTTGATAATTGCCGTAAGAGCAAGATCTTCTTCATCGCTTGGTATATTCATCGATTCTGTTCTGTTTTTCCTCGATCGCGCATTTGAATCTGGCTTTTCTGTTAAAATCTCTGATTAATTAGATGAGTTTTTTCGTCGGTTCTGATTGTAATCAGGATGATGGAATTAATCCCTAACTAATTGTTTGAATCGAATAGTGTGAATTGAAGGAATCTGTGTTGAATGGAATGAATGATTTGGTACAGGTCACCGACGGAATCGAGAATAAGAGCGAAAATTTTGTATGCAACTTCAAAGGATGGATTGAGGAGAGTACTTGAAGGAATTCATTATGAAGTTCAAGCAACTGATCCAACGGAGATGGGGATCGATGTGATCAAGGACAGAGCAAAATGAACAAATAATTAGAAGAAAAAAAGAAATACTAATCTCTTTAGGTATCTTTTACTTCGAATTTTTAATAATGAAATGACTATCTGCTTTTTCTTTTCTTTTCTTTTTTGTTCTTGGTTTGTTCATCATTTTTTTTTTTTTTTTGTTTGGGAGACTAATGTAAGTAAAAGAAAAAGGAGGAAAAGGGAAATTAAAGCCACTTTTCTTTTTATGTATTATTATTGGGTTTAATTTGGAAAAGAAAAGGAGAAAAGGAGAGCTGATAATTTATGAGTATGATATGTTAGTGTGTAATTTAAATCTTATAGTTGTAATTCAAATGTTATATTATTGTTGTTGTTTTTAATTATCTTTTTGCCTTTTTCATTTTCTTCCCCCACTTCATATTTGATTTTTGACACTTCACCATTTCTTCATTCATACACTTTATGCAATTATTTATCATTATTTTCCAATCCTTGTACATAAATCCTAAAGATACACTTTATGTTAAATTATACTTATATTTGTTCTAAAGATATAGATTAGGGTCAAAATCTCTCAAGCTTTTTTTTCTTTGTTGAATAATCGTATTTAAGAGGCTTGGATTTGTAATCATGGTTTTAATTTGTTGAACTTTACGTCTAAGCTTAGAATTTATATCTAATAATTTAAGGTTTGATAATTTGTTCTTTTGATTTTGAAATTTTATTTTCTATTTGATGATCATTTTGTTTTCCACAAAATTACTACAAATATCTATAAAATTCTATATGGGTTTAAATTTCATAATCTATTGTTGATAAACACTAATAAAAAAATAAATAATGCATTTTACACTTTTAAAAAAATGAGTTAGAAAAGTGATTTTATGATCAATGTTTTTATTTTATACAGTTTTGATCAAATATTGAGTCTATTGGGAATTTAGGATTGGAAACAAGAATGAATTTGTAGGAATTTATAATAATATTTATGAAAGTGAGAATAATAATATTATACATAAAGTCTATATATATATATAGTCTATAAGATCAATAATACAATTACAATACATCATCCAACATGCACATGAGATTTTAATGTAAATAATTGATTTATATCACATTATTTTACATTATGGACATGTTTGTTTGTGATGGGAGTTTGGAATATGATGACGCATGAAATTATATGATTTATTTGGAAGCCATTTTTGGATAATAATACTAATAATAAAGTTACTTTATGTTATATATATATATATTGTGAGCATATATATATGTATGAAGTATTATTGCATGGTGGGTAATCATGGACAATGACTTAGGAACATAAATGTGTGTTGAGGTTTTGGATGAAGATGAGTAGTGATGGTTCATTTTCTTTTTCAGCTGCAAGGAAGTAGAGATAAAGACAATTAATTAACATCATATGACATATAACCATCCTCCATTTCGTTTCTTGTTACGGTTAATTTTGGAACTATAGACTTTTGTAACGTGTTATAAGGCTATTAGTATGATGTTGATCAAGTCATTTTTATCAATGATAGATATTGATCAAGTCATTGTCTATAAATGCATTGGTT

mRNA sequence

GTTCTCTCCATTTTCAGACCTCAAAGCTTTACAACGAGACCTCAACAATGGCGATGGCTTTCAAAATGGCAACCACAGGAATGTGGGTAAGCGACGAGTGTAAGAATTCATTCATGGAGATGAAATGGAAGAAAGTGCATAGGTATATCGTGTTTAAGATCGATGAAGGATCGAGATTAGTCACCGTCGATAAAGTAGGCGGTCCTGCCGAAAGCTACGATGATCTCACCGCTTCATTACCAAACGATGACTGTCGATACGCGGTCTTCGATTTCGATTTCGTTACTGTTGATAATTGCCGTAAGAGCAAGATCTTCTTCATCGCTTGGTCACCGACGGAATCGAGAATAAGAGCGAAAATTTTGTATGCAACTTCAAAGGATGGATTGAGGAGAGTACTTGAAGGAATTCATTATGAAGTTCAAGCAACTGATCCAACGGAGATGGGGATCGATGTGATCAAGGACAGAGCAAAATGAACAAATAATTAGAAGAAAAAAAGAAATACTAATCTCTTTAGCTGCAAGGAAGTAGAGATAAAGACAATTAATTAACATCATATGACATATAACCATCCTCCATTTCGTTTCTTGTTACGGTTAATTTTGGAACTATAGACTTTTGTAACGTGTTATAAGGCTATTAGTATGATGTTGATCAAGTCATTTTTATCAATGATAGATATTGATCAAGTCATTGTCTATAAATGCATTGGTT

Coding sequence (CDS)

ATGGCGATGGCTTTCAAAATGGCAACCACAGGAATGTGGGTAAGCGACGAGTGTAAGAATTCATTCATGGAGATGAAATGGAAGAAAGTGCATAGGTATATCGTGTTTAAGATCGATGAAGGATCGAGATTAGTCACCGTCGATAAAGTAGGCGGTCCTGCCGAAAGCTACGATGATCTCACCGCTTCATTACCAAACGATGACTGTCGATACGCGGTCTTCGATTTCGATTTCGTTACTGTTGATAATTGCCGTAAGAGCAAGATCTTCTTCATCGCTTGGTCACCGACGGAATCGAGAATAAGAGCGAAAATTTTGTATGCAACTTCAAAGGATGGATTGAGGAGAGTACTTGAAGGAATTCATTATGAAGTTCAAGCAACTGATCCAACGGAGATGGGGATCGATGTGATCAAGGACAGAGCAAAATGA

Protein sequence

MAMAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDLTASLPNDDCRYAVFDFDFVTVDNCRKSKIFFIAWSPTESRIRAKILYATSKDGLRRVLEGIHYEVQATDPTEMGIDVIKDRAK

Homology

[Close]

BLAST of Cmc11g0287571 vs. NCBI nr
Match: XP_004147035.1 (actin-depolymerizing factor 5 [Cucumis sativus] >XP_008457680.1 PREDICTED: actin-depolymerizing factor 5-like [Cucumis melo] >KGN61924.1 hypothetical protein Csa_005919 [Cucumis sativus])

HSP 1 Score: 295.4 bits (755), Expect = 2.6e-76
Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 0


Query: 1   MAMAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDL 60
           MAMAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDL
Sbjct: 1   MAMAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDL 60

Query: 61  TASLPNDDCRYAVFDFDFVTVDNCRKSKIFFIAWSPTESRIRAKILYATSKDGLRRVLEG 120
           TASLPNDDCRYAVFDFDFVTVDNCRKSKIFFIAWSPTESRIRAKILYATSKDGLRRVLEG
Sbjct: 61  TASLPNDDCRYAVFDFDFVTVDNCRKSKIFFIAWSPTESRIRAKILYATSKDGLRRVLEG 120

Query: 121 IHYEVQATDPTEMGIDVIKDRAK 144
           IHYEVQATDPTEMGIDVIKDRAK
Sbjct: 121 IHYEVQATDPTEMGIDVIKDRAK 143

[Close]

BLAST of Cmc11g0287571 vs. NCBI nr
Match: XP_038901914.1 (actin-depolymerizing factor 5-like [Benincasa hispida])

HSP 1 Score: 294.3 bits (752), Expect = 5.8e-76
Identity = 142/143 (99.30%), Postives = 143/143 (100.00%), Query Frame = 0


Query: 1   MAMAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDL 60
           MAMAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDL
Sbjct: 1   MAMAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDL 60

Query: 61  TASLPNDDCRYAVFDFDFVTVDNCRKSKIFFIAWSPTESRIRAKILYATSKDGLRRVLEG 120
           TASLPNDDCRYAVFDFDFVTVDNCRKSKIFFIAWSPTESRIRAKILYATSKDGLRRVLEG
Sbjct: 61  TASLPNDDCRYAVFDFDFVTVDNCRKSKIFFIAWSPTESRIRAKILYATSKDGLRRVLEG 120

Query: 121 IHYEVQATDPTEMGIDVIKDRAK 144
           IHYEVQATDPTEMG+DVIKDRAK
Sbjct: 121 IHYEVQATDPTEMGMDVIKDRAK 143

[Close]

BLAST of Cmc11g0287571 vs. NCBI nr
Match: KAG6571025.1 (Actin-depolymerizing factor 5, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 288.9 bits (738), Expect = 2.4e-74
Identity = 140/143 (97.90%), Postives = 141/143 (98.60%), Query Frame = 0


Query: 1   MAMAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDL 60
           MAMAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDL
Sbjct: 624 MAMAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDL 683

Query: 61  TASLPNDDCRYAVFDFDFVTVDNCRKSKIFFIAWSPTESRIRAKILYATSKDGLRRVLEG 120
           TASLPNDDCRYAVFDFDFVTVDNCRKSKIFFIAWSPT SRIRAKILYATSK GLRRVLEG
Sbjct: 684 TASLPNDDCRYAVFDFDFVTVDNCRKSKIFFIAWSPTASRIRAKILYATSKAGLRRVLEG 743

Query: 121 IHYEVQATDPTEMGIDVIKDRAK 144
           IHYEVQATDPTEMG+DVIKDRAK
Sbjct: 744 IHYEVQATDPTEMGMDVIKDRAK 766

[Close]

BLAST of Cmc11g0287571 vs. NCBI nr
Match: XP_022943996.1 (actin-depolymerizing factor 5-like [Cucurbita moschata] >XP_022986745.1 actin-depolymerizing factor 5-like [Cucurbita maxima] >KAG7010856.1 Actin-depolymerizing factor 5, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 288.9 bits (738), Expect = 2.4e-74
Identity = 140/143 (97.90%), Postives = 141/143 (98.60%), Query Frame = 0


Query: 1   MAMAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDL 60
           MAMAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDL
Sbjct: 1   MAMAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDL 60

Query: 61  TASLPNDDCRYAVFDFDFVTVDNCRKSKIFFIAWSPTESRIRAKILYATSKDGLRRVLEG 120
           TASLPNDDCRYAVFDFDFVTVDNCRKSKIFFIAWSPT SRIRAKILYATSK GLRRVLEG
Sbjct: 61  TASLPNDDCRYAVFDFDFVTVDNCRKSKIFFIAWSPTASRIRAKILYATSKAGLRRVLEG 120

Query: 121 IHYEVQATDPTEMGIDVIKDRAK 144
           IHYEVQATDPTEMG+DVIKDRAK
Sbjct: 121 IHYEVQATDPTEMGMDVIKDRAK 143

[Close]

BLAST of Cmc11g0287571 vs. NCBI nr
Match: XP_023512924.1 (actin-depolymerizing factor 5-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 284.6 bits (727), Expect = 4.6e-73
Identity = 138/143 (96.50%), Postives = 140/143 (97.90%), Query Frame = 0


Query: 1   MAMAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDL 60
           MAMAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGG AESYDDL
Sbjct: 1   MAMAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGSAESYDDL 60

Query: 61  TASLPNDDCRYAVFDFDFVTVDNCRKSKIFFIAWSPTESRIRAKILYATSKDGLRRVLEG 120
           TASLPNDDCRYAVFDFDFVTVDNCRKSKIFFIAWSPT SRIRAKILYATSK GLRRVLEG
Sbjct: 61  TASLPNDDCRYAVFDFDFVTVDNCRKSKIFFIAWSPTASRIRAKILYATSKAGLRRVLEG 120

Query: 121 IHYEVQATDPTEMGIDVIKDRAK 144
           IHYE+QATDPTEMG+DVIKDRAK
Sbjct: 121 IHYELQATDPTEMGMDVIKDRAK 143

[Close]

BLAST of Cmc11g0287571 vs. ExPASy Swiss-Prot
Match: Q9ZNT3 (Actin-depolymerizing factor 5 OS=Arabidopsis thaliana OX=3702 GN=ADF5 PE=1 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 9.6e-66
Identity = 122/143 (85.31%), Postives = 130/143 (90.91%), Query Frame = 0


Query: 1   MAMAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDL 60
           MAMAFKMATTGM V+DEC +SFM+MKWKKVHRYIVFKI+E SR VTVDKVGG  ESY DL
Sbjct: 1   MAMAFKMATTGMRVTDECTSSFMDMKWKKVHRYIVFKIEEKSRKVTVDKVGGAGESYHDL 60

Query: 61  TASLPNDDCRYAVFDFDFVTVDNCRKSKIFFIAWSPTESRIRAKILYATSKDGLRRVLEG 120
             SLP DDCRYAVFDFDFVTVDNCRKSKIFFIAWSP  S+IRAKILYATSKDGLRRVLEG
Sbjct: 61  EDSLPVDDCRYAVFDFDFVTVDNCRKSKIFFIAWSPEASKIRAKILYATSKDGLRRVLEG 120

Query: 121 IHYEVQATDPTEMGIDVIKDRAK 144
           IHYE+QATDPTEMG D+I+DRAK
Sbjct: 121 IHYELQATDPTEMGFDIIQDRAK 143

[Close]

BLAST of Cmc11g0287571 vs. ExPASy Swiss-Prot
Match: O49606 (Actin-depolymerizing factor 9 OS=Arabidopsis thaliana OX=3702 GN=ADF9 PE=2 SV=2)

HSP 1 Score: 235.7 bits (600), Expect = 3.2e-61
Identity = 108/141 (76.60%), Postives = 123/141 (87.23%), Query Frame = 0


Query: 3   MAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDLTA 62
           MA K AT+GMW++D+CK SFMEMKWKKVHRY+V+K++E SR VTVDKVG   ESYDDL A
Sbjct: 1   MALKTATSGMWMTDDCKKSFMEMKWKKVHRYVVYKLEEKSRKVTVDKVGAAGESYDDLAA 60

Query: 63  SLPNDDCRYAVFDFDFVTVDNCRKSKIFFIAWSPTESRIRAKILYATSKDGLRRVLEGIH 122
           SLP DDCRYAVFDFD+VTVDNCR SKIFFI WSP  SRIR K++YATSK GLRRVL+G+H
Sbjct: 61  SLPEDDCRYAVFDFDYVTVDNCRMSKIFFITWSPEASRIREKMMYATSKSGLRRVLDGVH 120

Query: 123 YEVQATDPTEMGIDVIKDRAK 144
           YE+QATDPTEMG D I+DRAK
Sbjct: 121 YELQATDPTEMGFDKIQDRAK 141

[Close]

BLAST of Cmc11g0287571 vs. ExPASy Swiss-Prot
Match: Q10P87 (Actin-depolymerizing factor 5 OS=Oryza sativa subsp. japonica OX=39947 GN=ADF5 PE=2 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 5.4e-61
Identity = 111/143 (77.62%), Postives = 126/143 (88.11%), Query Frame = 0


Query: 1   MAMAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDL 60
           MAMA+KMAT GM V +EC+  FMEMKWKKVHR++V+KIDE SR V VDKVGGP E Y++L
Sbjct: 1   MAMAYKMATEGMNVKEECQRWFMEMKWKKVHRFVVYKIDERSRAVLVDKVGGPGEGYEEL 60

Query: 61  TASLPNDDCRYAVFDFDFVTVDNCRKSKIFFIAWSPTESRIRAKILYATSKDGLRRVLEG 120
            A+LP DDCRYAVFDFDFVTVDNC+KSKIFFIAWSPT SRIRAKILYATSK GLRRVL+G
Sbjct: 61  VAALPTDDCRYAVFDFDFVTVDNCQKSKIFFIAWSPTASRIRAKILYATSKQGLRRVLDG 120

Query: 121 IHYEVQATDPTEMGIDVIKDRAK 144
           +HYEVQATD +EMG DVI+ RA+
Sbjct: 121 VHYEVQATDSSEMGYDVIRGRAQ 143

[Close]

BLAST of Cmc11g0287571 vs. ExPASy Swiss-Prot
Match: Q8SAG3 (Actin-depolymerizing factor OS=Vitis vinifera OX=29760 PE=2 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 1.5e-50
Identity = 89/135 (65.93%), Postives = 116/135 (85.93%), Query Frame = 0


Query: 8   ATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDLTASLPND 67
           A++GM V+D  KN+F+E+K KKVHRY++FKIDE  + V V+K GGPAES+D+  A+LP +
Sbjct: 8   ASSGMGVADHSKNTFLELKRKKVHRYVIFKIDEKKKEVVVEKTGGPAESFDEFAAALPEN 67

Query: 68  DCRYAVFDFDFVTVDNCRKSKIFFIAWSPTESRIRAKILYATSKDGLRRVLEGIHYEVQA 127
           DCRYAV+DFDFVT +NC+KSKIFFIAWSP  SRIRAK+LYATSK+  RR L+G+HYE+QA
Sbjct: 68  DCRYAVYDFDFVTSENCQKSKIFFIAWSPDSSRIRAKMLYATSKERFRRELDGVHYEIQA 127

Query: 128 TDPTEMGIDVIKDRA 143
           TDPTEM ++V+++RA
Sbjct: 128 TDPTEMDLEVLRERA 142

[Close]

BLAST of Cmc11g0287571 vs. ExPASy Swiss-Prot
Match: Q9ZSK2 (Actin-depolymerizing factor 6 OS=Arabidopsis thaliana OX=3702 GN=ADF6 PE=1 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 2.4e-48
Identity = 87/135 (64.44%), Postives = 112/135 (82.96%), Query Frame = 0


Query: 8   ATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDLTASLPND 67
           A +GM V+DE K +F+E++ KK HRY+VFKIDE  + V V+K G P ESYDD  ASLP++
Sbjct: 11  AISGMGVADESKTTFLELQRKKTHRYVVFKIDESKKEVVVEKTGNPTESYDDFLASLPDN 70

Query: 68  DCRYAVFDFDFVTVDNCRKSKIFFIAWSPTESRIRAKILYATSKDGLRRVLEGIHYEVQA 127
           DCRYAV+DFDFVT +NC+KSKIFF AWSP+ S IRAK+LY+TSKD L R L+GIHYE+QA
Sbjct: 71  DCRYAVYDFDFVTSENCQKSKIFFFAWSPSTSGIRAKVLYSTSKDQLSRELQGIHYEIQA 130

Query: 128 TDPTEMGIDVIKDRA 143
           TDPTE+ ++V+++RA
Sbjct: 131 TDPTEVDLEVLRERA 145

[Close]

BLAST of Cmc11g0287571 vs. ExPASy TrEMBL
Match: A0A0A0LLM1 (ADF-H domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G270170 PE=3 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 1.3e-76
Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 0


Query: 1   MAMAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDL 60
           MAMAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDL
Sbjct: 1   MAMAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDL 60

Query: 61  TASLPNDDCRYAVFDFDFVTVDNCRKSKIFFIAWSPTESRIRAKILYATSKDGLRRVLEG 120
           TASLPNDDCRYAVFDFDFVTVDNCRKSKIFFIAWSPTESRIRAKILYATSKDGLRRVLEG
Sbjct: 61  TASLPNDDCRYAVFDFDFVTVDNCRKSKIFFIAWSPTESRIRAKILYATSKDGLRRVLEG 120

Query: 121 IHYEVQATDPTEMGIDVIKDRAK 144
           IHYEVQATDPTEMGIDVIKDRAK
Sbjct: 121 IHYEVQATDPTEMGIDVIKDRAK 143

[Close]

BLAST of Cmc11g0287571 vs. ExPASy TrEMBL
Match: A0A1S3C6R0 (actin-depolymerizing factor 5-like OS=Cucumis melo OX=3656 GN=LOC103497322 PE=3 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 1.3e-76
Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 0


Query: 1   MAMAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDL 60
           MAMAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDL
Sbjct: 1   MAMAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDL 60

Query: 61  TASLPNDDCRYAVFDFDFVTVDNCRKSKIFFIAWSPTESRIRAKILYATSKDGLRRVLEG 120
           TASLPNDDCRYAVFDFDFVTVDNCRKSKIFFIAWSPTESRIRAKILYATSKDGLRRVLEG
Sbjct: 61  TASLPNDDCRYAVFDFDFVTVDNCRKSKIFFIAWSPTESRIRAKILYATSKDGLRRVLEG 120

Query: 121 IHYEVQATDPTEMGIDVIKDRAK 144
           IHYEVQATDPTEMGIDVIKDRAK
Sbjct: 121 IHYEVQATDPTEMGIDVIKDRAK 143

[Close]

BLAST of Cmc11g0287571 vs. ExPASy TrEMBL
Match: A0A6J1JEW6 (actin-depolymerizing factor 5-like OS=Cucurbita maxima OX=3661 GN=LOC111484412 PE=3 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 1.2e-74
Identity = 140/143 (97.90%), Postives = 141/143 (98.60%), Query Frame = 0


Query: 1   MAMAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDL 60
           MAMAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDL
Sbjct: 1   MAMAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDL 60

Query: 61  TASLPNDDCRYAVFDFDFVTVDNCRKSKIFFIAWSPTESRIRAKILYATSKDGLRRVLEG 120
           TASLPNDDCRYAVFDFDFVTVDNCRKSKIFFIAWSPT SRIRAKILYATSK GLRRVLEG
Sbjct: 61  TASLPNDDCRYAVFDFDFVTVDNCRKSKIFFIAWSPTASRIRAKILYATSKAGLRRVLEG 120

Query: 121 IHYEVQATDPTEMGIDVIKDRAK 144
           IHYEVQATDPTEMG+DVIKDRAK
Sbjct: 121 IHYEVQATDPTEMGMDVIKDRAK 143

[Close]

BLAST of Cmc11g0287571 vs. ExPASy TrEMBL
Match: A0A6J1FT84 (actin-depolymerizing factor 5-like OS=Cucurbita moschata OX=3662 GN=LOC111448560 PE=3 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 1.2e-74
Identity = 140/143 (97.90%), Postives = 141/143 (98.60%), Query Frame = 0


Query: 1   MAMAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDL 60
           MAMAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDL
Sbjct: 1   MAMAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDL 60

Query: 61  TASLPNDDCRYAVFDFDFVTVDNCRKSKIFFIAWSPTESRIRAKILYATSKDGLRRVLEG 120
           TASLPNDDCRYAVFDFDFVTVDNCRKSKIFFIAWSPT SRIRAKILYATSK GLRRVLEG
Sbjct: 61  TASLPNDDCRYAVFDFDFVTVDNCRKSKIFFIAWSPTASRIRAKILYATSKAGLRRVLEG 120

Query: 121 IHYEVQATDPTEMGIDVIKDRAK 144
           IHYEVQATDPTEMG+DVIKDRAK
Sbjct: 121 IHYEVQATDPTEMGMDVIKDRAK 143

[Close]

BLAST of Cmc11g0287571 vs. ExPASy TrEMBL
Match: A0A6J1I143 (actin-depolymerizing factor 5-like OS=Cucurbita maxima OX=3661 GN=LOC111469893 PE=3 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 2.9e-73
Identity = 138/143 (96.50%), Postives = 139/143 (97.20%), Query Frame = 0


Query: 1   MAMAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDL 60
           MAMAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGG AESYDDL
Sbjct: 1   MAMAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGSAESYDDL 60

Query: 61  TASLPNDDCRYAVFDFDFVTVDNCRKSKIFFIAWSPTESRIRAKILYATSKDGLRRVLEG 120
           TASLP DDCRYAVFDFDFVT+DNCRKSKIFFIAWSPT SRIRAKILYATSK GLRRVLEG
Sbjct: 61  TASLPTDDCRYAVFDFDFVTIDNCRKSKIFFIAWSPTASRIRAKILYATSKAGLRRVLEG 120

Query: 121 IHYEVQATDPTEMGIDVIKDRAK 144
           IHYEVQATDPTEMGIDVIKDRAK
Sbjct: 121 IHYEVQATDPTEMGIDVIKDRAK 143

[Close]

BLAST of Cmc11g0287571 vs. TAIR 10
Match: AT2G16700.1 (actin depolymerizing factor 5 )

HSP 1 Score: 250.8 bits (639), Expect = 6.8e-67
Identity = 122/143 (85.31%), Postives = 130/143 (90.91%), Query Frame = 0


Query: 1   MAMAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDL 60
           MAMAFKMATTGM V+DEC +SFM+MKWKKVHRYIVFKI+E SR VTVDKVGG  ESY DL
Sbjct: 1   MAMAFKMATTGMRVTDECTSSFMDMKWKKVHRYIVFKIEEKSRKVTVDKVGGAGESYHDL 60

Query: 61  TASLPNDDCRYAVFDFDFVTVDNCRKSKIFFIAWSPTESRIRAKILYATSKDGLRRVLEG 120
             SLP DDCRYAVFDFDFVTVDNCRKSKIFFIAWSP  S+IRAKILYATSKDGLRRVLEG
Sbjct: 61  EDSLPVDDCRYAVFDFDFVTVDNCRKSKIFFIAWSPEASKIRAKILYATSKDGLRRVLEG 120

Query: 121 IHYEVQATDPTEMGIDVIKDRAK 144
           IHYE+QATDPTEMG D+I+DRAK
Sbjct: 121 IHYELQATDPTEMGFDIIQDRAK 143

[Close]

BLAST of Cmc11g0287571 vs. TAIR 10
Match: AT4G34970.1 (actin depolymerizing factor 9 )

HSP 1 Score: 235.7 bits (600), Expect = 2.3e-62
Identity = 108/141 (76.60%), Postives = 123/141 (87.23%), Query Frame = 0


Query: 3   MAFKMATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDLTA 62
           MA K AT+GMW++D+CK SFMEMKWKKVHRY+V+K++E SR VTVDKVG   ESYDDL A
Sbjct: 1   MALKTATSGMWMTDDCKKSFMEMKWKKVHRYVVYKLEEKSRKVTVDKVGAAGESYDDLAA 60

Query: 63  SLPNDDCRYAVFDFDFVTVDNCRKSKIFFIAWSPTESRIRAKILYATSKDGLRRVLEGIH 122
           SLP DDCRYAVFDFD+VTVDNCR SKIFFI WSP  SRIR K++YATSK GLRRVL+G+H
Sbjct: 61  SLPEDDCRYAVFDFDYVTVDNCRMSKIFFITWSPEASRIREKMMYATSKSGLRRVLDGVH 120

Query: 123 YEVQATDPTEMGIDVIKDRAK 144
           YE+QATDPTEMG D I+DRAK
Sbjct: 121 YELQATDPTEMGFDKIQDRAK 141

[Close]

BLAST of Cmc11g0287571 vs. TAIR 10
Match: AT2G16700.2 (actin depolymerizing factor 5 )

HSP 1 Score: 230.3 bits (586), Expect = 9.5e-61
Identity = 111/132 (84.09%), Postives = 119/132 (90.15%), Query Frame = 0


Query: 12  MWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDLTASLPNDDCRY 71
           M V+DEC +SFM+MKWKKVHRYIVFKI+E SR VTVDKVGG  ESY DL  SLP DDCRY
Sbjct: 1   MRVTDECTSSFMDMKWKKVHRYIVFKIEEKSRKVTVDKVGGAGESYHDLEDSLPVDDCRY 60

Query: 72  AVFDFDFVTVDNCRKSKIFFIAWSPTESRIRAKILYATSKDGLRRVLEGIHYEVQATDPT 131
           AVFDFDFVTVDNCRKSKIFFIAWSP  S+IRAKILYATSKDGLRRVLEGIHYE+QATDPT
Sbjct: 61  AVFDFDFVTVDNCRKSKIFFIAWSPEASKIRAKILYATSKDGLRRVLEGIHYELQATDPT 120

Query: 132 EMGIDVIKDRAK 144
           EMG D+I+DRAK
Sbjct: 121 EMGFDIIQDRAK 132

[Close]

BLAST of Cmc11g0287571 vs. TAIR 10
Match: AT2G31200.1 (actin depolymerizing factor 6 )

HSP 1 Score: 193.0 bits (489), Expect = 1.7e-49
Identity = 87/135 (64.44%), Postives = 112/135 (82.96%), Query Frame = 0


Query: 8   ATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDLTASLPND 67
           A +GM V+DE K +F+E++ KK HRY+VFKIDE  + V V+K G P ESYDD  ASLP++
Sbjct: 11  AISGMGVADESKTTFLELQRKKTHRYVVFKIDESKKEVVVEKTGNPTESYDDFLASLPDN 70

Query: 68  DCRYAVFDFDFVTVDNCRKSKIFFIAWSPTESRIRAKILYATSKDGLRRVLEGIHYEVQA 127
           DCRYAV+DFDFVT +NC+KSKIFF AWSP+ S IRAK+LY+TSKD L R L+GIHYE+QA
Sbjct: 71  DCRYAVYDFDFVTSENCQKSKIFFFAWSPSTSGIRAKVLYSTSKDQLSRELQGIHYEIQA 130

Query: 128 TDPTEMGIDVIKDRA 143
           TDPTE+ ++V+++RA
Sbjct: 131 TDPTEVDLEVLRERA 145

[Close]

BLAST of Cmc11g0287571 vs. TAIR 10
Match: AT4G00680.1 (actin depolymerizing factor 8 )

HSP 1 Score: 184.5 bits (467), Expect = 6.0e-47
Identity = 81/134 (60.45%), Postives = 111/134 (82.84%), Query Frame = 0


Query: 8   ATTGMWVSDECKNSFMEMKWKKVHRYIVFKIDEGSRLVTVDKVGGPAESYDDLTASLPND 67
           + +GM V+DECK  F+E+K K+ +R+IVFKIDE ++ V ++K+G P E+YDD T+S+P+D
Sbjct: 4   SASGMHVNDECKIKFLELKAKRTYRFIVFKIDEKAQQVQIEKLGNPEETYDDFTSSIPDD 63

Query: 68  DCRYAVFDFDFVTVDNCRKSKIFFIAWSPTESRIRAKILYATSKDGLRRVLEGIHYEVQA 127
           +CRYAV+DFDF T DNC+KSKIFFIAWSP  SR+R+K+LYA+SKD  +R +EGI  E+QA
Sbjct: 64  ECRYAVYDFDFTTEDNCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKREMEGIQVELQA 123

Query: 128 TDPTEMGIDVIKDR 142
           TDP+EM +D+IK R
Sbjct: 124 TDPSEMSLDIIKGR 137

The following BLAST results are available for this feature:

BLAST of Cmc11g0287571 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004147035.1	2.6e-76	100.00	actin-depolymerizing factor 5 [Cucumis sativus] >XP_008457680.1 PREDICTED: actin...	[more]
XP_038901914.1	5.8e-76	99.30	actin-depolymerizing factor 5-like [Benincasa hispida]	[more]
KAG6571025.1	2.4e-74	97.90	Actin-depolymerizing factor 5, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022943996.1	2.4e-74	97.90	actin-depolymerizing factor 5-like [Cucurbita moschata] >XP_022986745.1 actin-de...	[more]
XP_023512924.1	4.6e-73	96.50	actin-depolymerizing factor 5-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cmc11g0287571 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZNT3	9.6e-66	85.31	Actin-depolymerizing factor 5 OS=Arabidopsis thaliana OX=3702 GN=ADF5 PE=1 SV=1	[more]
O49606	3.2e-61	76.60	Actin-depolymerizing factor 9 OS=Arabidopsis thaliana OX=3702 GN=ADF9 PE=2 SV=2	[more]
Q10P87	5.4e-61	77.62	Actin-depolymerizing factor 5 OS=Oryza sativa subsp. japonica OX=39947 GN=ADF5 P...	[more]
Q8SAG3	1.5e-50	65.93	Actin-depolymerizing factor OS=Vitis vinifera OX=29760 PE=2 SV=1	[more]
Q9ZSK2	2.4e-48	64.44	Actin-depolymerizing factor 6 OS=Arabidopsis thaliana OX=3702 GN=ADF6 PE=1 SV=1	[more]

BLAST of Cmc11g0287571 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LLM1	1.3e-76	100.00	ADF-H domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G270170 PE=3 ...	[more]
A0A1S3C6R0	1.3e-76	100.00	actin-depolymerizing factor 5-like OS=Cucumis melo OX=3656 GN=LOC103497322 PE=3 ...	[more]
A0A6J1JEW6	1.2e-74	97.90	actin-depolymerizing factor 5-like OS=Cucurbita maxima OX=3661 GN=LOC111484412 P...	[more]
A0A6J1FT84	1.2e-74	97.90	actin-depolymerizing factor 5-like OS=Cucurbita moschata OX=3662 GN=LOC111448560...	[more]
A0A6J1I143	2.9e-73	96.50	actin-depolymerizing factor 5-like OS=Cucurbita maxima OX=3661 GN=LOC111469893 P...	[more]

BLAST of Cmc11g0287571 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G16700.1	6.8e-67	85.31	actin depolymerizing factor 5	[more]
AT4G34970.1	2.3e-62	76.60	actin depolymerizing factor 9	[more]
AT2G16700.2	9.5e-61	84.09	actin depolymerizing factor 5	[more]
AT2G31200.1	1.7e-49	64.44	actin depolymerizing factor 6	[more]
AT4G00680.1	6.0e-47	60.45	actin depolymerizing factor 8	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002108	Actin-depolymerising factor homology domain	SMART	SM00102	adf_2	coord: 16..143 e-value: 3.9E-49 score: 179.2
IPR002108	Actin-depolymerising factor homology domain	PFAM	PF00241	Cofilin_ADF	coord: 18..140 e-value: 5.0E-32 score: 110.3
IPR002108	Actin-depolymerising factor homology domain	PROSITE	PS51263	ADF_H	coord: 11..143 score: 35.765701
IPR029006	ADF-H/Gelsolin-like domain superfamily	GENE3D	3.40.20.10	Severin	coord: 8..143 e-value: 5.4E-45 score: 154.5
None	No IPR available	PANTHER	PTHR11913:SF98	ACTIN DEPOLYMERIZING FACTOR 5-RELATED	coord: 5..143
None	No IPR available	SUPERFAMILY	55753	Actin depolymerizing proteins	coord: 6..141
IPR017904	ADF/Cofilin	PANTHER	PTHR11913	COFILIN-RELATED	coord: 5..143
IPR017904	ADF/Cofilin	CDD	cd11286	ADF_cofilin_like	coord: 10..142 e-value: 1.13934E-59 score: 178.905

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc11g0287571.1	Cmc11g0287571.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030042	actin filament depolymerization
cellular_component	GO:0015629	actin cytoskeleton
molecular_function	GO:0003779	actin binding