Cmc11g0287351 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc11g0287351
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Pre-mRNA-splicing factor SYF2
Location	CMiso1.1chr11: 2364266 .. 2367966 (+)
RNA-Seq Expression	Cmc11g0287351
Synteny	Cmc11g0287351

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTATAATTATTATTTATATTTTTGGGAGGGATCTTGTGCAATTCTTCTCCCTTCTTCCCTAAACGCGAAGAGGAATCTGTTCCCTTCTGCTTCTTCTTCCTCCTCTTCTTCTTCGTGTTCTAACCCAAGCGGAAAAACCTAGGTTTCAGGTGCTGTTCTGTAGCTCTCTTTTAGCATCACTTATTCTTTTATTACTTTTCTCATAGTTTCCTATGCTTGCTTTTGCTTGAATTTCGGTTTTGCATCGCAAGATTTGACTGGAAGTAGCGATTGTTTTCGTGCTGCTATTTGTTTTTTTTTTTCTTGCTTGTTCGCTTTCCCAGAATACGAACAATAAAAAGGATTGTTGTTTTCCCCCCTTTTTTGGGTCTGTTTTTTTGGATGCTATAGTGGACTCAATCCTTTGTTATGTTGCTGTTCTTCGCTTCTCTTCCCCGGAAGAATCAAATTTCCGTCGGATAACTATGTTGGTTCGATAAATTCGGTTGCTTTAACAAGATTCGGTTGGAAATTTGAATGTTTTTTTTTTTTTTTTTGCTTGTTTGATTGATCATGTAATGCGACCATTGCATCCAATGGCACCCTTTTCCGGTTGTTTCGTTTATGGGTTTAAGAGTCCATAATTCTTTTACAAGATTTTTGAGCTCCGTTTAATTGTGTCTCTATATGCAGTGTATTATTGGGGTAAGATAAGTTGTTGCAGAGATGTCTGATGAAGGAAGAGTACACCCTGATTGTAGAAATGCTTCTAATCCTTATCATGAATGTAGCGAGTACTGCTTTAAAGTAATAGCTCAAATCAAAGCCCGGAGTCAGAAAAACGAGCCAGGTTTTTTGCCATACTGCAATGTCTTTGCAATTACCTTGAGCATCATGACTTTCTCTAATTGTCATCACTGTTTACCCTTTTGTGAAATTATTAATGCCCTCTTCGATTTACTTACTTCTTCTAAATTGTTCAAAATTGGCTCTATAAATTGCTTAATCGTCTTTGATTCCCTCCACCCTTCAATTTCTGATTATGTCATTAGCTACGTTTTCCTTCGCCTTTAATTTTTTCTCGTGAATTGTGATCACAGTTCCCACTTCATCAGAAACTGTACAAGCTGGTCGAAGTAGTGGTTCTTCCAGTTTTGTGCCTCCTGATGAGTATGAAGATCTTCATGATGAAAAGCCTGACGAAGAAGGGCACAGCGATGGTGATCTTGACAAATTTAGTGGCGAGGAAATTGTGGAAGGAGACTTCACAAAGCTCACGGGGAGGAAAAAGAAGTTGTTTGAAATTAGGCTTAAGATGGTAATTTTCTACAATTTTTAAAAAAGTAACAATCAACTATTATCGAGTAGTCATGACTTAGGCATGGTGGATGCAGAATGAGGCTCGGAAAGCTAATCAAACAGCAATCGCTGCTGAGAAAAAGAAAATGGAACCTCCATCAGAATCAAGAGGCATTTCTAAACAAAAGTGGCTTGAGGATCGGAAGAAGAAAATTGGGAAGCTTTTGGATGCAAATGGCTTGGATATGACAAAATCATATATGTTAGATACACAAGAGGCAGCAGAGGCCAAATATAAGAAATGGGAGAAGGATCCAGCTCCCTATGGATGGGATGGTGAGTCTCTATTCTTTTGTGCACATGGGCTCTTTAGAATACGTGCAGCTGCACCTATGTTTTCCGTTTGACATAAAATTATACTATGCTGATTTTAGCTTTTGTGTGTATAGACAGATGATTTTTTAGTAATTTTATAAGGAACCCTATTATGCTGTTTGATGATGGAAACATGATCTGATTCTAGGATATAGATATTATGTGGTGAGATGTCTAGGATGTGTATGCATACTCCTGCCCTAATTGGTGTGAACTCTTGTGTAGTATGGTTTTTCATAGCTATAGTCCTCTATGTTTCTCTCTGGTACAGAGCCATTTAGATTGATTGTTTAACTTTGATTTGTATCATATTCCAATATAATTACTTTTCTTTAGGGATGTGGGATGGCTTGGGTATAAAGTTTACTTAACTGGTTGTGTTTGACCTATTTCTTGTCACTATTTTAACACTTGTATTAAAAAAAGGTTAAACTGCGTTTGTTTTGACAGTCTTTAACCAGAAAACTTTATATAATGCATACAAGAAGAGGACGAAGAATGTAAATATTGACCTTGAGGAATATAATAAAATGAAAGAATCTGATCCTGAGTTCTACCGTGAGGCTTCAAGTCTTCAGTATGGAAAGGTAATGTTAGTTCCATGGTATAATTTCCAGTCTCGACCGTAGATGCAATTATTAGATTTCTTAGGACATAGCTTTCCCCACTACTCTGCAGGCACCTAAGATTTCAGAGGATAAGATAGAGAATATGGTGAAAGAACTCAAAGACCGAGATGAGAAGCGAAAGTCGTTTAGCCGTAGGAGGAAGTTCCATGAAGACAAGGATATCGATTCCATCAATGACCGTAATGAGCATTTCAACAAAAAGATTGAGCGGGCCTTTGGTAGATACACTCTGGAGATCAAAAACAATCTTGAGCGAGGAACTGCATTACCTGATTAAGGTATTGCTTAGAAGTGGCTCTGTTAGTTCCTACATGCAACTTTTTCCCTCTCCATATGCTTGATGCATGTTTTCCTCTTATTGTTTTTCACTACCTGCTAAGGAAGACTTACGTACAACCTAAACTGCACCCATCTTCATGTATCCCTTTCAATTTCAAAGTGAAAAAAAATATTTTTAGAAAAGAAGTTTTTGTGACGTGGCAGCTTGGAATTAGGCACTTGGGTGGGTGGGCTGCAAAAAGATAGCGCAACCAAGTGTTTTTCTCCTTTTTACCCTTGCTCCCCTTTCTCTGTTGTAACAAATTGTATCTTCTATGTTCTTTATCTGGCTGAAATTATGTTTTTTTCTTTCTAACCATGGTTTCCTTTGCTTGATTGAATCTTATGTTCTTTTTCGTTTTTCTGTAGGATTTTCGAGGAAGATCGGAATTCTAGTAGTTTGGAGTATTTAAAGCCTTTCTCCTTTAATTTCGAAAAGAAGTTATTCTGTAAAAGATTTCTGGCAAAGCTACAGAATTCTCCTTTTAAGTGAAGAGAAAATTGTAAGGTCACATGCCTTAGATAAGCAATGTACAATGTAGCAATATATTTGACAATAGTAACTTTGATTGAGTTTGTTTCATTGTGAATACCTTTGTTTCAACAGGTACGAATTAACCCAAACAAAGGATATCATTTTTTCTCCCCCTTAACAAAGATGGTAAAGAACGAGTAATTTTGACTGACTTATAACAATTCCATCTCAATGTACGAGTTAGATTTCTTTCCAAGTCACCTGTGCTTCCACGACAACAAAGAAATGCTTCCTAGTTTGGTAGATTACTTGTAGATCATGTAGATATCATTGTGTATTGTGTATTTATAAATGCAGTAAGTAGAAAGTAGAAAGTTTGAGTATCAAAATAAGCTTATTTTTTATTGCAGCTATCACACTATCACATCGCATATTTGTAGTTAACTAGGTTCTTACATAATGTGTCAAGTTCAATCGTCCACCCTCCTTGAAAACTACTTTTTTTTTTTCTTTTATGTTGGTTTCTAGGTTTTTGTTTAATGGCTTTTTTCATTAATTACAAAAGACAATTTAAAAAAGAAAAGCAATAATATCCCTTCTACTATGAGATCAAGATCCTTGGCTAT

mRNA sequence

GTATAATTATTATTTATATTTTTGGGAGGGATCTTGTGCAATTCTTCTCCCTTCTTCCCTAAACGCGAAGAGGAATCTGTTCCCTTCTGCTTCTTCTTCCTCCTCTTCTTCTTCGTGTTCTAACCCAAGCGGAAAAACCTAGGTTTCAGTGTATTATTGGGGTAAGATAAGTTGTTGCAGAGATGTCTGATGAAGGAAGAGTACACCCTGATTGTAGAAATGCTTCTAATCCTTATCATGAATGTAGCGAGTACTGCTTTAAAGTAATAGCTCAAATCAAAGCCCGGAGTCAGAAAAACGAGCCAGTTCCCACTTCATCAGAAACTGTACAAGCTGGTCGAAGTAGTGGTTCTTCCAGTTTTGTGCCTCCTGATGAGTATGAAGATCTTCATGATGAAAAGCCTGACGAAGAAGGGCACAGCGATGGTGATCTTGACAAATTTAGTGGCGAGGAAATTGTGGAAGGAGACTTCACAAAGCTCACGGGGAGGAAAAAGAAGTTGTTTGAAATTAGGCTTAAGATGAATGAGGCTCGGAAAGCTAATCAAACAGCAATCGCTGCTGAGAAAAAGAAAATGGAACCTCCATCAGAATCAAGAGGCATTTCTAAACAAAAGTGGCTTGAGGATCGGAAGAAGAAAATTGGGAAGCTTTTGGATGCAAATGGCTTGGATATGACAAAATCATATATGTTAGATACACAAGAGGCAGCAGAGGCCAAATATAAGAAATGGGAGAAGGATCCAGCTCCCTATGGATGGGATGTCTTTAACCAGAAAACTTTATATAATGCATACAAGAAGAGGACGAAGAATGTAAATATTGACCTTGAGGAATATAATAAAATGAAAGAATCTGATCCTGAGTTCTACCGTGAGGCTTCAAGTCTTCAGTATGGAAAGGCACCTAAGATTTCAGAGGATAAGATAGAGAATATGGTGAAAGAACTCAAAGACCGAGATGAGAAGCGAAAGTCGTTTAGCCGTAGGAGGAAGTTCCATGAAGACAAGGATATCGATTCCATCAATGACCGTAATGAGCATTTCAACAAAAAGATTGAGCGGGCCTTTGGTAGATACACTCTGGAGATCAAAAACAATCTTGAGCGAGGAACTGCATTACCTGATTAAGGATTTTCGAGGAAGATCGGAATTCTAGTAGTTTGGAGTATTTAAAGCCTTTCTCCTTTAATTTCGAAAAGAAGTTATTCTGTAAAAGATTTCTGGCAAAGCTACAGAATTCTCCTTTTAAGTGAAGAGAAAATTGTACGAATTAACCCAAACAAAGGATATCATTTTTTCTCCCCCTTAACAAAGATGGTAAAGAACGAGTAATTTTGACTGACTTATAACAATTCCATCTCAATGTACGAGTTAGATTTCTTTCCAAGTCACCTGTGCTTCCACGACAACAAAGAAATGCTTCCTAGTTTGGTAGATTACTTGTAGATCATGTAGATATCATTGTGTATTGTGTATTTATAAATGCAGTAAGTAGAAAGTAGAAAGTTTGAGTATCAAAATAAGCTTATTTTTTATTGCAGCTATCACACTATCACATCGCATATTTGTAGTTAACTAGGTTCTTACATAATGTGTCAAGTTCAATCGTCCACCCTCCTTGAAAACTACTTTTTTTTTTTCTTTTATGTTGGTTTCTAGGTTTTTGTTTAATGGCTTTTTTCATTAATTACAAAAGACAATTTAAAAAAGAAAAGCAATAATATCCCTTCTACTATGAGATCAAGATCCTTGGCTAT

Coding sequence (CDS)

ATGTCTGATGAAGGAAGAGTACACCCTGATTGTAGAAATGCTTCTAATCCTTATCATGAATGTAGCGAGTACTGCTTTAAAGTAATAGCTCAAATCAAAGCCCGGAGTCAGAAAAACGAGCCAGTTCCCACTTCATCAGAAACTGTACAAGCTGGTCGAAGTAGTGGTTCTTCCAGTTTTGTGCCTCCTGATGAGTATGAAGATCTTCATGATGAAAAGCCTGACGAAGAAGGGCACAGCGATGGTGATCTTGACAAATTTAGTGGCGAGGAAATTGTGGAAGGAGACTTCACAAAGCTCACGGGGAGGAAAAAGAAGTTGTTTGAAATTAGGCTTAAGATGAATGAGGCTCGGAAAGCTAATCAAACAGCAATCGCTGCTGAGAAAAAGAAAATGGAACCTCCATCAGAATCAAGAGGCATTTCTAAACAAAAGTGGCTTGAGGATCGGAAGAAGAAAATTGGGAAGCTTTTGGATGCAAATGGCTTGGATATGACAAAATCATATATGTTAGATACACAAGAGGCAGCAGAGGCCAAATATAAGAAATGGGAGAAGGATCCAGCTCCCTATGGATGGGATGTCTTTAACCAGAAAACTTTATATAATGCATACAAGAAGAGGACGAAGAATGTAAATATTGACCTTGAGGAATATAATAAAATGAAAGAATCTGATCCTGAGTTCTACCGTGAGGCTTCAAGTCTTCAGTATGGAAAGGCACCTAAGATTTCAGAGGATAAGATAGAGAATATGGTGAAAGAACTCAAAGACCGAGATGAGAAGCGAAAGTCGTTTAGCCGTAGGAGGAAGTTCCATGAAGACAAGGATATCGATTCCATCAATGACCGTAATGAGCATTTCAACAAAAAGATTGAGCGGGCCTTTGGTAGATACACTCTGGAGATCAAAAACAATCTTGAGCGAGGAACTGCATTACCTGATTAA

Protein sequence

MSDEGRVHPDCRNASNPYHECSEYCFKVIAQIKARSQKNEPVPTSSETVQAGRSSGSSSFVPPDEYEDLHDEKPDEEGHSDGDLDKFSGEEIVEGDFTKLTGRKKKLFEIRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKSYMLDTQEAAEAKYKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNIDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIENMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYTLEIKNNLERGTALPD

Homology

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BLAST of Cmc11g0287351 vs. NCBI nr
Match: XP_008457705.1 (PREDICTED: pre-mRNA-splicing factor syf2 [Cucumis melo] >KAA0045744.1 pre-mRNA-splicing factor syf2 [Cucumis melo var. makuwa] >TYJ99538.1 pre-mRNA-splicing factor syf2 [Cucumis melo var. makuwa])

HSP 1 Score: 619.8 bits (1597), Expect = 1.3e-173
Identity = 315/315 (100.00%), Postives = 315/315 (100.00%), Query Frame = 0


Query: 1   MSDEGRVHPDCRNASNPYHECSEYCFKVIAQIKARSQKNEPVPTSSETVQAGRSSGSSSF 60
           MSDEGRVHPDCRNASNPYHECSEYCFKVIAQIKARSQKNEPVPTSSETVQAGRSSGSSSF
Sbjct: 1   MSDEGRVHPDCRNASNPYHECSEYCFKVIAQIKARSQKNEPVPTSSETVQAGRSSGSSSF 60

Query: 61  VPPDEYEDLHDEKPDEEGHSDGDLDKFSGEEIVEGDFTKLTGRKKKLFEIRLKMNEARKA 120
           VPPDEYEDLHDEKPDEEGHSDGDLDKFSGEEIVEGDFTKLTGRKKKLFEIRLKMNEARKA
Sbjct: 61  VPPDEYEDLHDEKPDEEGHSDGDLDKFSGEEIVEGDFTKLTGRKKKLFEIRLKMNEARKA 120

Query: 121 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKSYMLDTQEAAEAK 180
           NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKSYMLDTQEAAEAK
Sbjct: 121 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKSYMLDTQEAAEAK 180

Query: 181 YKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNIDLEEYNKMKESDPEFYREASSLQYGK 240
           YKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNIDLEEYNKMKESDPEFYREASSLQYGK
Sbjct: 181 YKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNIDLEEYNKMKESDPEFYREASSLQYGK 240

Query: 241 APKISEDKIENMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300
           APKISEDKIENMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Sbjct: 241 APKISEDKIENMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300

Query: 301 LEIKNNLERGTALPD 316
           LEIKNNLERGTALPD
Sbjct: 301 LEIKNNLERGTALPD 315

[Close]

BLAST of Cmc11g0287351 vs. NCBI nr
Match: XP_011649295.1 (pre-mRNA-splicing factor syf2 [Cucumis sativus] >KGN61940.1 hypothetical protein Csa_006692 [Cucumis sativus])

HSP 1 Score: 610.5 bits (1573), Expect = 8.0e-171
Identity = 309/315 (98.10%), Postives = 313/315 (99.37%), Query Frame = 0


Query: 1   MSDEGRVHPDCRNASNPYHECSEYCFKVIAQIKARSQKNEPVPTSSETVQAGRSSGSSSF 60
           MSDEGRVHPDCRNASNPYHECSEYCFKVIA++KARSQKNEPVPTSSETVQAGRSSGSSSF
Sbjct: 1   MSDEGRVHPDCRNASNPYHECSEYCFKVIAELKARSQKNEPVPTSSETVQAGRSSGSSSF 60

Query: 61  VPPDEYEDLHDEKPDEEGHSDGDLDKFSGEEIVEGDFTKLTGRKKKLFEIRLKMNEARKA 120
           VPPDEYEDLHDEKPDEEGHSDGDLDKFSGEE VEGDFTKLTGRKKKLFEIRLKMNEARKA
Sbjct: 61  VPPDEYEDLHDEKPDEEGHSDGDLDKFSGEENVEGDFTKLTGRKKKLFEIRLKMNEARKA 120

Query: 121 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKSYMLDTQEAAEAK 180
           NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTK+YMLDTQEAAE K
Sbjct: 121 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAENK 180

Query: 181 YKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNIDLEEYNKMKESDPEFYREASSLQYGK 240
           YKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNIDLEEYNKMKESDPEFYREASSLQYGK
Sbjct: 181 YKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNIDLEEYNKMKESDPEFYREASSLQYGK 240

Query: 241 APKISEDKIENMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300
           APKISEDKI+NMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Sbjct: 241 APKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300

Query: 301 LEIKNNLERGTALPD 316
           LEIKNNLERGTALPD
Sbjct: 301 LEIKNNLERGTALPD 315

[Close]

BLAST of Cmc11g0287351 vs. NCBI nr
Match: XP_038900868.1 (pre-mRNA-splicing factor syf2 [Benincasa hispida])

HSP 1 Score: 592.8 bits (1527), Expect = 1.7e-165
Identity = 302/315 (95.87%), Postives = 309/315 (98.10%), Query Frame = 0


Query: 1   MSDEGRVHPDCRNASNPYHECSEYCFKVIAQIKARSQKNEPVPTSSETVQAGRSSGSSSF 60
           MSDEGRVHPDCRNASNPYHECSEYCFKVIA++KARSQKNEPVPT SE VQAG  SGSS+F
Sbjct: 1   MSDEGRVHPDCRNASNPYHECSEYCFKVIAEVKARSQKNEPVPTLSEAVQAGH-SGSSNF 60

Query: 61  VPPDEYEDLHDEKPDEEGHSDGDLDKFSGEEIVEGDFTKLTGRKKKLFEIRLKMNEARKA 120
           VPPDEYEDLHDEKPD EGHSDGD+DKFSGEE VEGDFTKLTGRKKKLFEIRLKMNEARKA
Sbjct: 61  VPPDEYEDLHDEKPD-EGHSDGDIDKFSGEENVEGDFTKLTGRKKKLFEIRLKMNEARKA 120

Query: 121 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKSYMLDTQEAAEAK 180
           NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTK+YMLDTQEAAEAK
Sbjct: 121 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAEAK 180

Query: 181 YKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNIDLEEYNKMKESDPEFYREASSLQYGK 240
           YKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVN+DLEEYNKMKESDPEFYREASSLQYGK
Sbjct: 181 YKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGK 240

Query: 241 APKISEDKIENMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300
           APKISEDKI+NMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Sbjct: 241 APKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300

Query: 301 LEIKNNLERGTALPD 316
           LEIKNNLERGTALPD
Sbjct: 301 LEIKNNLERGTALPD 313

[Close]

BLAST of Cmc11g0287351 vs. NCBI nr
Match: XP_022943827.1 (pre-mRNA-splicing factor syf2-like [Cucurbita moschata] >XP_022943828.1 pre-mRNA-splicing factor syf2-like [Cucurbita moschata])

HSP 1 Score: 589.3 bits (1518), Expect = 1.9e-164
Identity = 296/315 (93.97%), Postives = 310/315 (98.41%), Query Frame = 0


Query: 1   MSDEGRVHPDCRNASNPYHECSEYCFKVIAQIKARSQKNEPVPTSSETVQAGRSSGSSSF 60
           MSDEGRVHPDCRNASNPYHEC+EYCFKVIA++KAR+Q+NEPVPTSSE VQAGRSSGSS+F
Sbjct: 1   MSDEGRVHPDCRNASNPYHECTEYCFKVIAEVKARNQQNEPVPTSSEGVQAGRSSGSSNF 60

Query: 61  VPPDEYEDLHDEKPDEEGHSDGDLDKFSGEEIVEGDFTKLTGRKKKLFEIRLKMNEARKA 120
           VPPDEYEDL DEKP+EEGHSDGD DKFSG E VEGDFTKLTGRKKKLFEIRLKMNEARKA
Sbjct: 61  VPPDEYEDLRDEKPNEEGHSDGDTDKFSGGENVEGDFTKLTGRKKKLFEIRLKMNEARKA 120

Query: 121 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKSYMLDTQEAAEAK 180
           NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDM+K+YMLDTQEAAE+K
Sbjct: 121 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMSKAYMLDTQEAAESK 180

Query: 181 YKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNIDLEEYNKMKESDPEFYREASSLQYGK 240
           YKKWEKDPAPYGWDVFNQKTLY+AYKKRTKNVN+DLEEYNKMKESDPEFYREASSLQYGK
Sbjct: 181 YKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGK 240

Query: 241 APKISEDKIENMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300
           APKISEDKI+NMVKELKDR+EKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Sbjct: 241 APKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300

Query: 301 LEIKNNLERGTALPD 316
           LEIKNNLERGTALPD
Sbjct: 301 LEIKNNLERGTALPD 315

[Close]

BLAST of Cmc11g0287351 vs. NCBI nr
Match: KAG7010847.1 (Pre-mRNA-splicing factor syf2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 589.3 bits (1518), Expect = 1.9e-164
Identity = 296/315 (93.97%), Postives = 310/315 (98.41%), Query Frame = 0


Query: 1   MSDEGRVHPDCRNASNPYHECSEYCFKVIAQIKARSQKNEPVPTSSETVQAGRSSGSSSF 60
           MSDEGRVHPDCRNASNPYHEC+EYCFKVIA++KAR+Q+NEPVPTSSE VQAGRSSGSS+F
Sbjct: 433 MSDEGRVHPDCRNASNPYHECTEYCFKVIAEVKARNQQNEPVPTSSEGVQAGRSSGSSNF 492

Query: 61  VPPDEYEDLHDEKPDEEGHSDGDLDKFSGEEIVEGDFTKLTGRKKKLFEIRLKMNEARKA 120
           VPPDEYEDL DEKP+EEGHSDGD DKFSG E VEGDFTKLTGRKKKLFEIRLKMNEARKA
Sbjct: 493 VPPDEYEDLRDEKPNEEGHSDGDTDKFSGGENVEGDFTKLTGRKKKLFEIRLKMNEARKA 552

Query: 121 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKSYMLDTQEAAEAK 180
           NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDM+K+YMLDTQEAAE+K
Sbjct: 553 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMSKAYMLDTQEAAESK 612

Query: 181 YKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNIDLEEYNKMKESDPEFYREASSLQYGK 240
           YKKWEKDPAPYGWDVFNQKTLY+AYKKRTKNVN+DLEEYNKMKESDPEFYREASSLQYGK
Sbjct: 613 YKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGK 672

Query: 241 APKISEDKIENMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300
           APKISEDKI+NMVKELKDR+EKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Sbjct: 673 APKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 732

Query: 301 LEIKNNLERGTALPD 316
           LEIKNNLERGTALPD
Sbjct: 733 LEIKNNLERGTALPD 747

[Close]

BLAST of Cmc11g0287351 vs. ExPASy Swiss-Prot
Match: Q8AVQ6 (Pre-mRNA-splicing factor syf2 OS=Xenopus laevis OX=8355 GN=syf2 PE=2 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 4.8e-25
Identity = 84/219 (38.36%), Postives = 125/219 (57.08%), Query Frame = 0


Query: 99  KLTGRKKKLFEIRLKMNEARKANQTAIAAEKKKMEPPS--ESRGISKQKWLEDRKKKIGK 158
           K   R +K  E+ LK NEARK N   +  E K+ + PS  E+R    +  L++ +KK  +
Sbjct: 26  KREARLRKFRELHLKTNEARKLNHQEVVEEDKRQKLPSNWEARKARLEWELKNEEKK--R 85

Query: 159 LLDANGLDMTKSYMLD--TQEAAEAKYKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNI 218
              ANG+D  ++ +L+   ++A   + KK  K+P   G+  +    L   Y++ TK +  
Sbjct: 86  ECAANGVDFERAKLLEISAEDAERWERKKKRKNP-DLGFSDYAAAQL-RQYQRLTKQIKP 145

Query: 219 DLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIENMVKELKDRDEKRKSFSRRRKFHE 278
           D+EEY   KE   E +   S   Y      S+  I+ MV +L+ + EKR+ +SRRR +++
Sbjct: 146 DMEEYEMEKEKQGELFYPTSDSLYHGTHVPSQSGIDRMVTDLEKQIEKREKYSRRRAYND 205

Query: 279 DKDIDSINDRNEHFNKKIERAFGRYTLEIKNNLERGTAL 314
           D DID IN+RN  FNKK ER +G+YT EIK NLERGTA+
Sbjct: 206 DADIDYINERNAKFNKKAERFYGKYTAEIKQNLERGTAV 240

[Close]

BLAST of Cmc11g0287351 vs. ExPASy Swiss-Prot
Match: Q28G05 (Pre-mRNA-splicing factor syf2 OS=Xenopus tropicalis OX=8364 GN=syf2 PE=2 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 1.4e-24
Identity = 83/219 (37.90%), Postives = 125/219 (57.08%), Query Frame = 0


Query: 99  KLTGRKKKLFEIRLKMNEARKANQTAIAAEKKKMEPPS--ESRGISKQKWLEDRKKKIGK 158
           K   R +K  E+ LK NEARK N   +  E K+ + PS  E+R    +  L++ +KK  +
Sbjct: 35  KREARLRKFRELHLKTNEARKLNHQEVVEEDKRQKLPSNWEARKARLEWELKEEEKK--R 94

Query: 159 LLDANGLDMTKSYMLD--TQEAAEAKYKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNI 218
              ANG+D  ++ +L+   ++A   + KK  K+P   G+  +    L   Y++ TK +  
Sbjct: 95  ECAANGVDYERAKLLEISAEDAERWERKKKRKNP-DLGFSDYAAAQL-RQYQRLTKQIKP 154

Query: 219 DLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIENMVKELKDRDEKRKSFSRRRKFHE 278
           D+EEY   K+   E +   S   Y      S+  I+ MV +L+ + EKR+ +SRRR +++
Sbjct: 155 DMEEYEMEKQKQGEMFYPTSESLYHGTHIPSQSGIDRMVTDLEKQIEKREKYSRRRAYND 214

Query: 279 DKDIDSINDRNEHFNKKIERAFGRYTLEIKNNLERGTAL 314
           D DID IN+RN  FNKK ER +G+YT EIK NLERGTA+
Sbjct: 215 DADIDYINERNAKFNKKAERFYGKYTAEIKQNLERGTAV 249

[Close]

BLAST of Cmc11g0287351 vs. ExPASy Swiss-Prot
Match: Q6DGP2 (Pre-mRNA-splicing factor syf2 OS=Danio rerio OX=7955 GN=syf2 PE=2 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 2.6e-23
Identity = 85/229 (37.12%), Postives = 127/229 (55.46%), Query Frame = 0


Query: 90  EEIVEGDFT-KLTGRKKKLFEIRLKMNEARKANQTAIAAEKKKMEPPSE---SRGISKQK 149
           EE+ E     K   R +K  E+  K NEARK N   +  E K+++ PS     +   + +
Sbjct: 14  EEVTETPAAQKREERLRKFRELHFKRNEARKLNHQEVVEEDKRLKLPSNWEAKKARLEYE 73

Query: 150 WLEDRKKKIGKLLDANGLDMTKSYMLDTQEAAEAKYKKWEKDPAPYGWDVFNQKTLYNAY 209
            L D+KKK          D  K   +  ++A   + KK +++P P G+  + +  L   Y
Sbjct: 74  LLVDQKKK-ECAERGEDYDRVKLLEISAEDAERWERKKKKRNPDP-GFSGYAEAQL-RQY 133

Query: 210 KKRTKNVNIDLEEYNKMKES-DPEFYREASSLQYGKAPKISEDKIENMVKELKDRDEKRK 269
           ++ TK +  D+E Y K KE    +F+  ++SL YG     S+D I  MV +++ + EKR 
Sbjct: 134 QRLTKQIKPDMENYEKQKEECGEDFHPTSNSLIYGTHVP-SKDSINRMVDDVEKQIEKRA 193

Query: 270 SFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYTLEIKNNLERGTAL 314
            +SRRR +++D DID IN+RN  FNKK ER +G+YT EIK NLERGTA+
Sbjct: 194 KYSRRRAYNDDADIDYINERNAKFNKKAERFYGKYTAEIKQNLERGTAV 238

[Close]

BLAST of Cmc11g0287351 vs. ExPASy Swiss-Prot
Match: Q6DV01 (Pre-mRNA-splicing factor syf2 OS=Gekko japonicus OX=146911 GN=syf2 PE=2 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 7.6e-23
Identity = 80/215 (37.21%), Postives = 128/215 (59.53%), Query Frame = 0


Query: 105 KKLFEIRLKMNEARKANQTAIAAEKKKMEPPSE-SRGISKQKW---LEDRKKKIGKLLDA 164
           +K  E+ LK NEARK N   +  E K+++ P+      S+ +W   +E++KK+      A
Sbjct: 41  RKFRELHLKRNEARKLNHQEVVEEDKRLKLPANWEAKKSRLEWELKVEEKKKE----CVA 100

Query: 165 NGLDMTKSYMLD-TQEAAEAKYKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNIDLEEY 224
            G D  +  +L+ + E AE   +K +K     G+  +    +   Y++ T+ +  DLE+Y
Sbjct: 101 KGEDYERVKLLEISAEDAERFERKRKKRNPDLGFSDYAAAQM-RQYQRLTRQIKPDLEKY 160

Query: 225 NKMK-ESDPEFYREASSLQYGKAPKISEDKIENMVKELKDRDEKRKSFSRRRKFHEDKDI 284
            K++ ES  EFY  ++SL +G      E  ++ MV++L+ + +KR+ +SRRR +++D DI
Sbjct: 161 AKLREESGEEFYPTSNSLLHGTHVPCKEG-VDKMVEDLEKQIQKREKYSRRRPYNDDADI 220

Query: 285 DSINDRNEHFNKKIERAFGRYTLEIKNNLERGTAL 314
           D IN+RN  FNKK ER +G+YT EIK NLERGTA+
Sbjct: 221 DYINERNAKFNKKAERFYGKYTAEIKQNLERGTAV 249

[Close]

BLAST of Cmc11g0287351 vs. ExPASy Swiss-Prot
Match: Q9D198 (Pre-mRNA-splicing factor SYF2 OS=Mus musculus OX=10090 GN=Syf2 PE=2 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 9.9e-23
Identity = 82/215 (38.14%), Postives = 125/215 (58.14%), Query Frame = 0


Query: 103 RKKKLFEIRLKMNEARKANQTAIAAEKKKMEPPS--ESRGISKQKWLEDRKKKIGKLLDA 162
           R +K  E+ LK NEARK N   +  E K+++ P+  E++    +  L++ +KK  K   A
Sbjct: 32  RLRKFRELHLKRNEARKLNHQEVVEEDKRLKLPANWEAKKARLEWELQEEEKK--KECAA 91

Query: 163 NGLDMTKSYMLD-TQEAAEAKYKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNIDLEEY 222
            G D  K  +L+ + E AE   ++ +K     G+  +    L   Y + TK +  D+E Y
Sbjct: 92  RGEDYEKVKLLEISAEDAERWERRKKKKNPDLGFSDYAAAQL-RQYHRLTKQIKPDMESY 151

Query: 223 NKMKESDPE-FYREASSLQYGKAPKISEDKIENMVKELKDRDEKRKSFSRRRKFHEDKDI 282
            + +E   E F+  ++SL +G     SE+ I+ MV +L+ + EKR  +SRRR +++D DI
Sbjct: 152 ERQREKHGEDFFPTSNSLLHGTHVPSSEE-IDRMVLDLEKQIEKRDKYSRRRPYNDDADI 211

Query: 283 DSINDRNEHFNKKIERAFGRYTLEIKNNLERGTAL 314
           D IN+RN  FNKK ER +G+YT EIK NLERGTA+
Sbjct: 212 DYINERNAKFNKKAERFYGKYTAEIKQNLERGTAV 242

[Close]

BLAST of Cmc11g0287351 vs. ExPASy TrEMBL
Match: A0A5A7TRR3 (Pre-mRNA-splicing factor SYF2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G001060 PE=3 SV=1)

HSP 1 Score: 619.8 bits (1597), Expect = 6.4e-174
Identity = 315/315 (100.00%), Postives = 315/315 (100.00%), Query Frame = 0


Query: 1   MSDEGRVHPDCRNASNPYHECSEYCFKVIAQIKARSQKNEPVPTSSETVQAGRSSGSSSF 60
           MSDEGRVHPDCRNASNPYHECSEYCFKVIAQIKARSQKNEPVPTSSETVQAGRSSGSSSF
Sbjct: 1   MSDEGRVHPDCRNASNPYHECSEYCFKVIAQIKARSQKNEPVPTSSETVQAGRSSGSSSF 60

Query: 61  VPPDEYEDLHDEKPDEEGHSDGDLDKFSGEEIVEGDFTKLTGRKKKLFEIRLKMNEARKA 120
           VPPDEYEDLHDEKPDEEGHSDGDLDKFSGEEIVEGDFTKLTGRKKKLFEIRLKMNEARKA
Sbjct: 61  VPPDEYEDLHDEKPDEEGHSDGDLDKFSGEEIVEGDFTKLTGRKKKLFEIRLKMNEARKA 120

Query: 121 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKSYMLDTQEAAEAK 180
           NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKSYMLDTQEAAEAK
Sbjct: 121 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKSYMLDTQEAAEAK 180

Query: 181 YKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNIDLEEYNKMKESDPEFYREASSLQYGK 240
           YKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNIDLEEYNKMKESDPEFYREASSLQYGK
Sbjct: 181 YKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNIDLEEYNKMKESDPEFYREASSLQYGK 240

Query: 241 APKISEDKIENMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300
           APKISEDKIENMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Sbjct: 241 APKISEDKIENMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300

Query: 301 LEIKNNLERGTALPD 316
           LEIKNNLERGTALPD
Sbjct: 301 LEIKNNLERGTALPD 315

[Close]

BLAST of Cmc11g0287351 vs. ExPASy TrEMBL
Match: A0A1S3C6T5 (Pre-mRNA-splicing factor SYF2 OS=Cucumis melo OX=3656 GN=LOC103497339 PE=3 SV=1)

HSP 1 Score: 619.8 bits (1597), Expect = 6.4e-174
Identity = 315/315 (100.00%), Postives = 315/315 (100.00%), Query Frame = 0


Query: 1   MSDEGRVHPDCRNASNPYHECSEYCFKVIAQIKARSQKNEPVPTSSETVQAGRSSGSSSF 60
           MSDEGRVHPDCRNASNPYHECSEYCFKVIAQIKARSQKNEPVPTSSETVQAGRSSGSSSF
Sbjct: 1   MSDEGRVHPDCRNASNPYHECSEYCFKVIAQIKARSQKNEPVPTSSETVQAGRSSGSSSF 60

Query: 61  VPPDEYEDLHDEKPDEEGHSDGDLDKFSGEEIVEGDFTKLTGRKKKLFEIRLKMNEARKA 120
           VPPDEYEDLHDEKPDEEGHSDGDLDKFSGEEIVEGDFTKLTGRKKKLFEIRLKMNEARKA
Sbjct: 61  VPPDEYEDLHDEKPDEEGHSDGDLDKFSGEEIVEGDFTKLTGRKKKLFEIRLKMNEARKA 120

Query: 121 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKSYMLDTQEAAEAK 180
           NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKSYMLDTQEAAEAK
Sbjct: 121 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKSYMLDTQEAAEAK 180

Query: 181 YKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNIDLEEYNKMKESDPEFYREASSLQYGK 240
           YKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNIDLEEYNKMKESDPEFYREASSLQYGK
Sbjct: 181 YKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNIDLEEYNKMKESDPEFYREASSLQYGK 240

Query: 241 APKISEDKIENMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300
           APKISEDKIENMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Sbjct: 241 APKISEDKIENMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300

Query: 301 LEIKNNLERGTALPD 316
           LEIKNNLERGTALPD
Sbjct: 301 LEIKNNLERGTALPD 315

[Close]

BLAST of Cmc11g0287351 vs. ExPASy TrEMBL
Match: A0A0A0LJ81 (Pre-mRNA-splicing factor SYF2 OS=Cucumis sativus OX=3659 GN=Csa_2G270830 PE=3 SV=1)

HSP 1 Score: 610.5 bits (1573), Expect = 3.9e-171
Identity = 309/315 (98.10%), Postives = 313/315 (99.37%), Query Frame = 0


Query: 1   MSDEGRVHPDCRNASNPYHECSEYCFKVIAQIKARSQKNEPVPTSSETVQAGRSSGSSSF 60
           MSDEGRVHPDCRNASNPYHECSEYCFKVIA++KARSQKNEPVPTSSETVQAGRSSGSSSF
Sbjct: 1   MSDEGRVHPDCRNASNPYHECSEYCFKVIAELKARSQKNEPVPTSSETVQAGRSSGSSSF 60

Query: 61  VPPDEYEDLHDEKPDEEGHSDGDLDKFSGEEIVEGDFTKLTGRKKKLFEIRLKMNEARKA 120
           VPPDEYEDLHDEKPDEEGHSDGDLDKFSGEE VEGDFTKLTGRKKKLFEIRLKMNEARKA
Sbjct: 61  VPPDEYEDLHDEKPDEEGHSDGDLDKFSGEENVEGDFTKLTGRKKKLFEIRLKMNEARKA 120

Query: 121 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKSYMLDTQEAAEAK 180
           NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTK+YMLDTQEAAE K
Sbjct: 121 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAENK 180

Query: 181 YKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNIDLEEYNKMKESDPEFYREASSLQYGK 240
           YKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNIDLEEYNKMKESDPEFYREASSLQYGK
Sbjct: 181 YKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNIDLEEYNKMKESDPEFYREASSLQYGK 240

Query: 241 APKISEDKIENMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300
           APKISEDKI+NMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Sbjct: 241 APKISEDKIDNMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300

Query: 301 LEIKNNLERGTALPD 316
           LEIKNNLERGTALPD
Sbjct: 301 LEIKNNLERGTALPD 315

[Close]

BLAST of Cmc11g0287351 vs. ExPASy TrEMBL
Match: A0A6J1FXE9 (Pre-mRNA-splicing factor SYF2 OS=Cucurbita moschata OX=3662 GN=LOC111448448 PE=3 SV=1)

HSP 1 Score: 589.3 bits (1518), Expect = 9.2e-165
Identity = 296/315 (93.97%), Postives = 310/315 (98.41%), Query Frame = 0


Query: 1   MSDEGRVHPDCRNASNPYHECSEYCFKVIAQIKARSQKNEPVPTSSETVQAGRSSGSSSF 60
           MSDEGRVHPDCRNASNPYHEC+EYCFKVIA++KAR+Q+NEPVPTSSE VQAGRSSGSS+F
Sbjct: 1   MSDEGRVHPDCRNASNPYHECTEYCFKVIAEVKARNQQNEPVPTSSEGVQAGRSSGSSNF 60

Query: 61  VPPDEYEDLHDEKPDEEGHSDGDLDKFSGEEIVEGDFTKLTGRKKKLFEIRLKMNEARKA 120
           VPPDEYEDL DEKP+EEGHSDGD DKFSG E VEGDFTKLTGRKKKLFEIRLKMNEARKA
Sbjct: 61  VPPDEYEDLRDEKPNEEGHSDGDTDKFSGGENVEGDFTKLTGRKKKLFEIRLKMNEARKA 120

Query: 121 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKSYMLDTQEAAEAK 180
           NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDM+K+YMLDTQEAAE+K
Sbjct: 121 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMSKAYMLDTQEAAESK 180

Query: 181 YKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNIDLEEYNKMKESDPEFYREASSLQYGK 240
           YKKWEKDPAPYGWDVFNQKTLY+AYKKRTKNVN+DLEEYNKMKESDPEFYREASSLQYGK
Sbjct: 181 YKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGK 240

Query: 241 APKISEDKIENMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300
           APKISEDKI+NMVKELKDR+EKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Sbjct: 241 APKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300

Query: 301 LEIKNNLERGTALPD 316
           LEIKNNLERGTALPD
Sbjct: 301 LEIKNNLERGTALPD 315

[Close]

BLAST of Cmc11g0287351 vs. ExPASy TrEMBL
Match: A0A6J1JD37 (Pre-mRNA-splicing factor SYF2 OS=Cucurbita maxima OX=3661 GN=LOC111483944 PE=3 SV=1)

HSP 1 Score: 588.2 bits (1515), Expect = 2.1e-164
Identity = 295/315 (93.65%), Postives = 310/315 (98.41%), Query Frame = 0


Query: 1   MSDEGRVHPDCRNASNPYHECSEYCFKVIAQIKARSQKNEPVPTSSETVQAGRSSGSSSF 60
           MSDEGRVHPDCRNASNPYHEC+EYCFKVIA++KAR+Q+NEPVPTSSE VQAGRSSGSS+F
Sbjct: 1   MSDEGRVHPDCRNASNPYHECTEYCFKVIAEVKARNQQNEPVPTSSEGVQAGRSSGSSNF 60

Query: 61  VPPDEYEDLHDEKPDEEGHSDGDLDKFSGEEIVEGDFTKLTGRKKKLFEIRLKMNEARKA 120
           VPPDEYEDL DEKP+EEGHSDGD DKFSG E VEGDFTKLTGRKKKLFEIRLKMNEARKA
Sbjct: 61  VPPDEYEDLRDEKPNEEGHSDGDTDKFSGGENVEGDFTKLTGRKKKLFEIRLKMNEARKA 120

Query: 121 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKSYMLDTQEAAEAK 180
           NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDM+K+YMLDTQEAAE+K
Sbjct: 121 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMSKAYMLDTQEAAESK 180

Query: 181 YKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNIDLEEYNKMKESDPEFYREASSLQYGK 240
           YKKWEKDPAPYGWDVFNQKTLY+AYKKRTKNVN+DLEEYNKMK+SDPEFYREASSLQYGK
Sbjct: 181 YKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDLEEYNKMKDSDPEFYREASSLQYGK 240

Query: 241 APKISEDKIENMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300
           APKISEDKI+NMVKELKDR+EKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Sbjct: 241 APKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300

Query: 301 LEIKNNLERGTALPD 316
           LEIKNNLERGTALPD
Sbjct: 301 LEIKNNLERGTALPD 315

[Close]

BLAST of Cmc11g0287351 vs. TAIR 10
Match: AT2G16860.1 (GCIP-interacting family protein )

HSP 1 Score: 410.6 bits (1054), Expect = 1.1e-114
Identity = 216/315 (68.57%), Postives = 256/315 (81.27%), Query Frame = 0


Query: 1   MSDEGRVHPDCRNASNPYHECSEYCFKVIAQIKARSQKNEPVPTSSETVQAGRSSGSSSF 60
           M  E RVHPDC NASNPYHEC EYCFK IA+ KAR +K              +++G +  
Sbjct: 1   MVSERRVHPDCINASNPYHECVEYCFKKIAEAKARFEK--------------QNTGLAK- 60

Query: 61  VPPDEYEDLHDEKPDEEGHSDGDLDKFSGEEIVEGDFTKLTGRKKKLFEIRLKMNEARKA 120
           V     E L D++ +E+   + + ++ + E  V  D T+LTGR+KKLFE+RLKMNEARK+
Sbjct: 61  VHEQTREPLDDKRIEEDSSEEEEEEEDNQEPQV--DVTQLTGRQKKLFELRLKMNEARKS 120

Query: 121 NQTAIAAEKKKMEPPSESRGISKQKWLEDRKKKIGKLLDANGLDMTKSYMLDTQEAAEAK 180
           NQT + +EKKKME P+E++GISKQKWLE RKKKIGKLLDANGLDMT++YMLDTQEAAE+K
Sbjct: 121 NQTDVGSEKKKMEAPTETKGISKQKWLEGRKKKIGKLLDANGLDMTQAYMLDTQEAAESK 180

Query: 181 YKKWEKDPAPYGWDVFNQKTLYNAYKKRTKNVNIDLEEYNKMKESDPEFYREASSLQYGK 240
           YKKWEK+P P GWDVFNQKTLYNAYKKRTKN+ +DLEEYN+M+ +DPEFYREASSLQYGK
Sbjct: 181 YKKWEKEPTPAGWDVFNQKTLYNAYKKRTKNIQVDLEEYNRMRAADPEFYREASSLQYGK 240

Query: 241 APKISEDKIENMVKELKDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT 300
           APK S+DKI+ M KEL DR++KR+ FSRRRKF E+KDIDSINDRNEHFNKKIERAFG+YT
Sbjct: 241 APKTSQDKIDKMAKELLDREQKRQEFSRRRKFREEKDIDSINDRNEHFNKKIERAFGKYT 298

Query: 301 LEIKNNLERGTALPD 316
           LEIKNNLERGTALPD
Sbjct: 301 LEIKNNLERGTALPD 298

[Close]

BLAST of Cmc11g0287351 vs. TAIR 10
Match: AT4G38560.1 (Arabidopsis phospholipase-like protein (PEARLI 4) family )

HSP 1 Score: 42.4 bits (98), Expect = 8.1e-04
Identity = 16/26 (61.54%), Postives = 19/26 (73.08%), Query Frame = 0


Query: 5  GRVHPDCRNASNPYHECSEYCFKVIA 31
          G VH DC N+ NPYHEC + CFK I+
Sbjct: 3  GIVHHDCPNSGNPYHECHDQCFKRIS 28

[Close]

BLAST of Cmc11g0287351 vs. TAIR 10
Match: AT4G38560.2 (Arabidopsis phospholipase-like protein (PEARLI 4) family )

HSP 1 Score: 42.4 bits (98), Expect = 8.1e-04
Identity = 16/26 (61.54%), Postives = 19/26 (73.08%), Query Frame = 0


Query: 5  GRVHPDCRNASNPYHECSEYCFKVIA 31
          G VH DC N+ NPYHEC + CFK I+
Sbjct: 3  GIVHHDCPNSGNPYHECHDQCFKRIS 28

The following BLAST results are available for this feature:

BLAST of Cmc11g0287351 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008457705.1	1.3e-173	100.00	PREDICTED: pre-mRNA-splicing factor syf2 [Cucumis melo] >KAA0045744.1 pre-mRNA-s...	[more]
XP_011649295.1	8.0e-171	98.10	pre-mRNA-splicing factor syf2 [Cucumis sativus] >KGN61940.1 hypothetical protein...	[more]
XP_038900868.1	1.7e-165	95.87	pre-mRNA-splicing factor syf2 [Benincasa hispida]	[more]
XP_022943827.1	1.9e-164	93.97	pre-mRNA-splicing factor syf2-like [Cucurbita moschata] >XP_022943828.1 pre-mRNA...	[more]
KAG7010847.1	1.9e-164	93.97	Pre-mRNA-splicing factor syf2 [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Cmc11g0287351 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8AVQ6	4.8e-25	38.36	Pre-mRNA-splicing factor syf2 OS=Xenopus laevis OX=8355 GN=syf2 PE=2 SV=1	[more]
Q28G05	1.4e-24	37.90	Pre-mRNA-splicing factor syf2 OS=Xenopus tropicalis OX=8364 GN=syf2 PE=2 SV=1	[more]
Q6DGP2	2.6e-23	37.12	Pre-mRNA-splicing factor syf2 OS=Danio rerio OX=7955 GN=syf2 PE=2 SV=1	[more]
Q6DV01	7.6e-23	37.21	Pre-mRNA-splicing factor syf2 OS=Gekko japonicus OX=146911 GN=syf2 PE=2 SV=1	[more]
Q9D198	9.9e-23	38.14	Pre-mRNA-splicing factor SYF2 OS=Mus musculus OX=10090 GN=Syf2 PE=2 SV=1	[more]

BLAST of Cmc11g0287351 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TRR3	6.4e-174	100.00	Pre-mRNA-splicing factor SYF2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A1S3C6T5	6.4e-174	100.00	Pre-mRNA-splicing factor SYF2 OS=Cucumis melo OX=3656 GN=LOC103497339 PE=3 SV=1	[more]
A0A0A0LJ81	3.9e-171	98.10	Pre-mRNA-splicing factor SYF2 OS=Cucumis sativus OX=3659 GN=Csa_2G270830 PE=3 SV...	[more]
A0A6J1FXE9	9.2e-165	93.97	Pre-mRNA-splicing factor SYF2 OS=Cucurbita moschata OX=3662 GN=LOC111448448 PE=3...	[more]
A0A6J1JD37	2.1e-164	93.65	Pre-mRNA-splicing factor SYF2 OS=Cucurbita maxima OX=3661 GN=LOC111483944 PE=3 S...	[more]

BLAST of Cmc11g0287351 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G16860.1	1.1e-114	68.57	GCIP-interacting family protein	[more]
AT4G38560.1	8.1e-04	61.54	Arabidopsis phospholipase-like protein (PEARLI 4) family	[more]
AT4G38560.2	8.1e-04	61.54	Arabidopsis phospholipase-like protein (PEARLI 4) family	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013260	mRNA splicing factor SYF2	PFAM	PF08231	SYF2	coord: 161..308 e-value: 6.7E-34 score: 117.6
IPR013260	mRNA splicing factor SYF2	PANTHER	PTHR13264	GCIP-INTERACTING PROTEIN P29	coord: 1..315
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 37..61
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 64..90
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 258..284
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 35..90
None	No IPR available	PANTHER	PTHR13264:SF5	PRE-MRNA-SPLICING FACTOR SYF2	coord: 1..315

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc11g0287351.1	Cmc11g0287351.1	mRNA