Cmc11g0287241 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc11g0287241
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Unknown protein
Location	CMiso1.1chr11: 2284852 .. 2288711 (-)
RNA-Seq Expression	Cmc11g0287241
Synteny	Cmc11g0287241

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CATTTTCAAAAGTTATATATTTTTTTTTTGAACTTGTAAAACTATTTTTCTTAGTCAATGTCAACCACAATCCAGATTGGCGGAGATCTGGCTGAAATTGATCGAAAAAAATAGTTTTAACCGTTTAAGAAACGAAAACCAAAACATTTGGTTACTTTTGTCAATCTACCATTTTATTTAAATAGTGTAGAAGTCGTGTCACGTATATATCCACCGGATCCGACGGTGGCGACGGCCGTTGCTGCCTCTGCTCGACGCAAGCCACCACATGAGTTCGCCCTGTTGTATTATCGTTGGTGCCGAAATCCTGATCTCCTGAGACGCTGGTTTGCATCTTCTAGGGTTTTTTTATATATATTATTAGTTCTTTAGCGTACTGGATAGTTAGTGATCGTTTCACTTCTTTGATTTTTCATCGCAATGTGCCCAGATAAATTGTATTTACATGAACGTTATTGAATTTCAATCAAGCCGAGAGTAGTCGCACTTCGAATTCTACCTCTCGGAAGCTTAATTCCTGCTAGATTAGTGTAGTGCAGGTCCTTATAGATTTCCTAACGTTTTGACTTCGAGGAAAGAGAGTAGGTCTTAGCATAGCATGTGTACTGGAAGCCTGTAGAGTATAGGATGGACCTTGGGAATTGTACCATGCTAATAGAGCGAGATTCTCAGAGTTCCGACAAGATAATTTGTACGGCCTACGGCTTGATTTTGTTGGTTTTTGATATTGAAAATCGGGAGGAATCCATTATTGGGTCGGAAAACTCACGGTAAAGATTAGAAGATGGTTATGAATTAAGAACATTTTAGTTCTTTTTCACAATTTTGAAGTTGATGGGAAAGTGTTATTGTTCTTTATGTACTTATCTACAATTTATGGAGGCGTTCTTATGAGCTGAGAATATTTTAATTCTTTTACAAAATTTTGAAGCTGATGGGAAAGTATGGTTCTTTATGTACTTGTCTACAATTTGTGAAGGCATTCTTATAAACTAATAACATTTTAGGTCTTTTTCATCATTTTGAAGTTGATGGGAAACTTTGGTTGTTCTTTATTGACTTGTTTACAATTTTTGGAGGCATTCTTATGGACTTCCATTGTCGTATGTACGTGTGTCATCAAACCTTTTGTTTGCTTTTTTTTTTTCAGTACTGGGAACATATATGAACCCCCTATCTGTATCTTTAAAGCCTAAACCATTACAAAATACTGTCATCAAGCAAGTTCTTGTCGCTTTTGGTTGCTGCTGAAAACTTTTGATGTTGTGTGCTCTGCTTTATAAACTTTTAGTTCTTTTTCTGTCTGCTGACCTGTTTCCACTGATAAAACAAATAAATCGTGAAGAAGCAAAAAATTGAGCTATTTCTCATTAATCAACATCAGTACGTAGAAACCACTGGTTATGAAACCGTATATTGCAAGATTGATATGATTAGAGTACTCGTTTGGATCTGATAAAGTTGTTCTGCTTAAGATTTTAAGTGCTTATGAGATTTTTTTCCCAAAGCTGACTAATATGATTTGTGCTAAAAGAGCCTTTCCATGTGGGCCTAATTGCTTTTTCACCATCATTATCCATTTTGTGTTGCTCAAGTTTTTATGTTCTTTAATTGATTGGGGTAGTGCATTATTAGCCAGTCCTGAGTATAGTTCACTGGCTCCCTCTACAATTGATCTTTTCCAATTTTCAGATCATTTTGATTCTCATCTTCTCAGTTACCTTGTTTTTTATCTGTAAACATGTTCAAAATTTTGTTGGTTTCATTTCTAGCTTGTTTGGATAAAACCATTTGAACAAGAAACATCACATCATCACATCAAGTTGCCATTCAATAAAGTGTTTGTCTAAAGAGAAAAAGGTAAGAGAGAGGATAGCAAATTTGATGGTAATTTTACTCTATGAAGTTCAGAGTTCTGAAAGCAGCCCCCCCACCAGGAAAAGATAGAAAAGAGAAAGCAAAACAAAAAGGGTACAGATTTAATTACAGTCTCCTATTCCTACTTACGTCACATCAGATATATTACTGACCTGGTGTTTTTCCTCTCTTCCTTATCCTCTCTCTCTCTCTATCTCCTTGGATTTTCCCTAACAGGAATGATAAATGAAGCCTTTTCAAGCTGCAGGTCACTCCCAACCCAACTAACAGTCATCATGCAACGCCCAACCTTCTACAGCTTCAATGGCAGCTTTTGCTAGAGAGATCAAAGTTAAGGCTTTGCTTGGCAGTCCCACCTACTTGTCTAAAACGAATTGTGCCACTGCCACCATCTATGGATGCTTGGTTGTTAATCACTTATTCACCGAAAGAAGAGTGAATCAATGTAGATTTGGTTGTACGGATGGCGACAATCCTAAGGTGAGTTTTTAAACAAGAAAGATTCTTAAAGACGACTAGTTACATCTATCTTTATGCATCACACACGATAGTTTGCTACATGATAAATATTTTTATAAATATTTATTTTGTGTACTTAATAAGGATGAGATGCATAGAAATAGATTTATAGAGAGGATAAATTGTAAATTTGGTTGGTGTGATTCGGAAAAAGTTATAATTTAGTCTCTGATTTTACGAAGTTTTATCAAATTAGAAGGATTAGATTTTAACTTTCTCCAAACCATTACCATGTTTAGAGCAACTATTTAGGGCAGTTGGGTCTTTTTCTTCTTCTTCTTCTTCTTCTTATTGCTAATCTAAGTGAAAATTATTTGCAAAAGTTTAGTGGCTTTTGTGAAGTCCTTGTATTAATCAAATTCTAAAGGGAAATCTTGTACTTTATGTCAATCATTCCTTCCAAATCTGATGAGAAAAAGAAAAAGAGGCTATTTTGCTTCCTACTTTTTTTCAAGTTTAAGAAACCAATGGAATGCTAAGTATGGAGGCAAAGAACATTTGATTGGTGAGTTTGAAAGACAAAAGTTTCCAATATTTAGATGTGTTGTCTTTTCTAATCTAGCTATCCTCATGATATATTATTTCGGCATAAATATGAAAACATGTGGACTAAATTATTACAAAGGGACCAAAAGTGTTTTTAATCGTATAATAGAGTATCTGAGGCCTACTTTCCATTTTATCTGTATGATTCTAAATTTAAAAACAAAACATTTTTAAAGTTTATTTTATCTTTTGCCTATCATCATTGGCACTTCTTTAATGTACATGACACATGTGACAGATCATTGAAGATCTACATATGGGATTATTGTAGCTAACTACTTATGGGATTTTCTTTCATCCCACATTATCTTTTTTTTTTTTTTATAATTATTATTATTGAATTGGACTCCTACATTTTGCTTCTTCTTTTCATCTCTACTTTTGGTGTTTTTTTTTTTTTTTTTTTTAGTTTTTTTAGCTTCTTTTCATCTTTACTTTCTGTTTTCATTTCATCCTTAGGGTTTTAAGGTTTACATTTTCACTTTTAATATTTTACCAAAATAATAATTCACTTTGATATTTGTTTCCGGTAACTAATAATTAATTTGGATGAATTACAATAAAGTAAAATTTCACCAATCTCCTTGTCACCATTGCAGTTAATTTAAAATGTCTACATCATAACTATTCTCAGCAATTGAAGGAAAGATATCGCTAAAAATCAAACTTGAGCGATTCAGAGGAAGGAGGTAATGTGTAAATGTTGAAATCTAGGGAAACGAATATTAAACTCAAACTTAAACGTGAAAAGATAATATCTTAAATCATATGAAATAAATATAAATTAAAATTTGATTGAAAACTTGGGTCGAAAAAAATATTTTTCTCTAAAATTCGAATAAGAGAACTTATTATATGTGAAAATTGAAAGTTTATCAACCCGTTGTATATTTTAAATGGATTTATTTTAGAAATAG

mRNA sequence

CATTTTCAAAAGTTATATATTTTTTTTTTGAACTTGTAAAACTATTTTTCTTAGTCAATGTCAACCACAATCCAGATTGGCGGAGATCTGGCTGAAATTGATCGAAAAAAATAGTTTTAACCGTTTAAGAAACGAAAACCAAAACATTTGGTTACTTTTGTCAATCTACCATTTTATTTAAATAGTGTAGAAGTCGTGTCACGTATATATCCACCGGATCCGACGGTGGCGACGGCCGTTGCTGCCTCTGCTCGACGCAAGCCACCACATGAGTTCGCCCTGTTGTATTATCGTTGGTGCCGAAATCCTGATCTCCTGAGACGCTGCTTGTTTGGATAAAACCATTTGAACAAGAAACATCACATCATCACATCAAGTTGCCATTCAATAAAGTGTTTGTCTAAAGAGAAAAAGGTAAGAGAGAGGATAGCAAATTTGATGGTAATTTTACTCTATGAAGTTCAGAGTTCTGAAAGCAGCCCCCCCACCAGGAAAAGATAGAAAAGAGAAAGCAAAACAAAAAGGGAATGATAAATGAAGCCTTTTCAAGCTGCAGGTCACTCCCAACCCAACTAACAGTCATCATGCAACGCCCAACCTTCTACAGCTTCAATGGCAGCTTTTGCTAGAGAGATCAAAGTTAAGGCTTTGCTTGGCAGTCCCACCTACTTGTCTAAAACGAATTGTGCCACTGCCACCATCTATGGATGCTTGGTTGTTAATCACTTATTCACCGAAAGAAGAGTGAATCAATGTAGATTTGGTTGTACGGATGGCGACAATCCTAAGTTAATTTAAAATGTCTACATCATAACTATTCTCAGCAATTGAAGGAAAGATATCGCTAAAAATCAAACTTGAGCGATTCAGAGGAAGGAGGTAATGTGTAAATGTTGAAATCTAGGGAAACGAATATTAAACTCAAACTTAAACGTGAAAAGATAATATCTTAAATCATATGAAATAAATATAAATTAAAATTTGATTGAAAACTTGGGTCGAAAAAAATATTTTTCTCTAAAATTCGAATAAGAGAACTTATTATATGTGAAAATTGAAAGTTTATCAACCCGTTGTATATTTTAAATGGATTTATTTTAGAAATAG

Coding sequence (CDS)

ATGGCAGCTTTTGCTAGAGAGATCAAAGTTAAGGCTTTGCTTGGCAGTCCCACCTACTTGTCTAAAACGAATTGTGCCACTGCCACCATCTATGGATGCTTGGTTGTTAATCACTTATTCACCGAAAGAAGAGTGAATCAATGTAGATTTGGTTGTACGGATGGCGACAATCCTAAGTTAATTTAA

Protein sequence

MAAFAREIKVKALLGSPTYLSKTNCATATIYGCLVVNHLFTERRVNQCRFGCTDGDNPKLI

Homology

[Close]

BLAST of Cmc11g0287241 vs. NCBI nr
Match: XP_022971136.1 (uncharacterized protein LOC111469901 [Cucurbita maxima] >XP_022971137.1 uncharacterized protein LOC111469901 [Cucurbita maxima] >XP_022971138.1 uncharacterized protein LOC111469901 [Cucurbita maxima])

HSP 1 Score: 84.0 bits (206), Expect = 5.0e-13
Identity = 37/52 (71.15%), Postives = 44/52 (84.62%), Query Frame = 0


Query: 9   KVKALLGSPTYLSKTNCATATIYGCLVVNHLFTERRVNQCRFGCTDGDNPKL 61
           + KAL  SPTYLSKT+CATAT++GCLVV H  TERRVNQCRF CTDG +P++
Sbjct: 53  RAKALFDSPTYLSKTSCATATLFGCLVVPHSPTERRVNQCRFFCTDGGSPEI 104

[Close]

BLAST of Cmc11g0287241 vs. ExPASy TrEMBL
Match: A0A6J1I151 (uncharacterized protein LOC111469901 OS=Cucurbita maxima OX=3661 GN=LOC111469901 PE=4 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 2.4e-13
Identity = 37/52 (71.15%), Postives = 44/52 (84.62%), Query Frame = 0


Query: 9   KVKALLGSPTYLSKTNCATATIYGCLVVNHLFTERRVNQCRFGCTDGDNPKL 61
           + KAL  SPTYLSKT+CATAT++GCLVV H  TERRVNQCRF CTDG +P++
Sbjct: 53  RAKALFDSPTYLSKTSCATATLFGCLVVPHSPTERRVNQCRFFCTDGGSPEI 104

The following BLAST results are available for this feature:

BLAST of Cmc11g0287241 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022971136.1	5.0e-13	71.15	uncharacterized protein LOC111469901 [Cucurbita maxima] >XP_022971137.1 uncharac...	[more]

BLAST of Cmc11g0287241 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Cmc11g0287241 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I151	2.4e-13	71.15	uncharacterized protein LOC111469901 OS=Cucurbita maxima OX=3661 GN=LOC111469901...	[more]

BLAST of Cmc11g0287241 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PROSITE	PS51257	PROKAR_LIPOPROTEIN	coord: 1..33 score: 5.0

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc11g0287241.1	Cmc11g0287241.1	mRNA