Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. TTTGAAAGTGGAAGATAAGATTATTGAAGGGGAAAAGATGAGTGAGAGAGGGGAATGGCAAAACTCAAAAGAGAAAGACGGAGGACAGATGAAGTCCAGCGGCGACCGGCAATTGTATCCATATCCATATCCATATCCATATCCAGGTCCTTTCTTTACTCCTCAAACTCCGGCGTCGAGGAGCAAAATCAAAAACAACTTTCTCAAGACAGGCACCATCGGCATCGCCGCCAACTCATCCTCTACCACCAACAAATAAATTATTCATCCAACTCTGTTTTCTTTCTCTCTCTGTTTTAATTAGTTTCTATGTGCTTTAATAATTAATTTGAAGTTTCATCTACCATATAATATAATGTTTTAATATCATTCTAAATTCTCATTCCTCTCATCAATCTCTCCTGCTTAGTTAAAATTATATATATATCCCCACATCCATTTCGTCATTGGAAATGGATCAGTCCTTATGCGGTATTAACGGTGCCTTGAGAGTAGAGATGTCCACAGGACAGGGAGGGCCGGGATGTCACTACCCGTCCGTCCCACTCCCTATTCCATCCCCACAAATTTTCCTACTCTCCACTCCATCTCCCATTCTCATTCTCGGTGTATTTGGGGATTTTTCGTCTATTTTGGATGGGTCTTTGTAGAGTCTCGACACATCTTTTATTAAAAATTATTCGATGAAACTATCACAAGATATCTAAGAGTTAGAATTTATATATTATTTAAACAATCGCGATAATAGGTAGACATTGAAGGTTTGCTTGGTTAATTTTTAGTTTTTTTTGTTACTCTGGTATCCTAAAAAAGATTTGGTTTCACTCTCTAATAGTAAAACACAGATAATAAAGTAACAGAATTCAGTGGTAGAAATGTATTTATAGGTCGAATTTTCAATTAAAAGAACAGACAAAAGATAATGTAGTTACCAAAAGGTC mRNA sequence TTTGAAAGTGGAAGATAAGATTATTGAAGGGGAAAAGATGAGTGAGAGAGGGGAATGGCAAAACTCAAAAGAGAAAGACGGAGGACAGATGAAGTCCAGCGGCGACCGGCAATTGTATCCATATCCATATCCATATCCATATCCAGGTCCTTTCTTTACTCCTCAAACTCCGGCGTCGAGGAGCAAAATCAAAAACAACTTTCTCAAGACAGGCACCATCGGCATCGCCGCCAACTCATCCTCTACCACCAACAAATAAATTATTCATCCAACTCTGTTTTCTTTCTCTCTCTGTTTTAATTAGTTTCTATGTGCTTTAATAATTAATTTGAAGTTTCATCTACCATATAATATAATGTTTTAATATCATTCTAAATTCTCATTCCTCTCATCAATCTCTCCTGCTTAGTTAAAATTATATATATATCCCCACATCCATTTCGTCATTGGAAATGGATCAGTCCTTATGCGGTATTAACGGTGCCTTGAGAGTAGAGATGTCCACAGGACAGGGAGGGCCGGGATGTCACTACCCGTCCGTCCCACTCCCTATTCCATCCCCACAAATTTTCCTACTCTCCACTCCATCTCCCATTCTCATTCTCGGTGTATTTGGGGATTTTTCGTCTATTTTGGATGGGTCTTTGTAGAGTCTCGACACATCTTTTATTAAAAATTATTCGATGAAACTATCACAAGATATCTAAGAGTTAGAATTTATATATTATTTAAACAATCGCGATAATAGGTAGACATTGAAGGTTTGCTTGGTTAATTTTTAGTTTTTTTTGTTACTCTGGTATCCTAAAAAAGATTTGGTTTCACTCTCTAATAGTAAAACACAGATAATAAAGTAACAGAATTCAGTGGTAGAAATGTATTTATAGGTCGAATTTTCAATTAAAAGAACAGACAAAAGATAATGTAGTTACCAAAAGGTC Coding sequence (CDS) ATGAGTGAGAGAGGGGAATGGCAAAACTCAAAAGAGAAAGACGGAGGACAGATGAAGTCCAGCGGCGACCGGCAATTGTATCCATATCCATATCCATATCCATATCCAGGTCCTTTCTTTACTCCTCAAACTCCGGCGTCGAGGAGCAAAATCAAAAACAACTTTCTCAAGACAGGCACCATCGGCATCGCCGCCAACTCATCCTCTACCACCAACAAATAA Protein sequence MSERGEWQNSKEKDGGQMKSSGDRQLYPYPYPYPYPGPFFTPQTPASRSKIKNNFLKTGTIGIAANSSSTTNK
Homology
BLAST of Cmc11g0284661 vs. NCBI nr
Match: KAE8651988.1 (hypothetical protein Csa_016955 [Cucumis sativus]) HSP 1 Score: 73.6 bits (179), Expect = 8.2e-10 Identity = 43/73 (58.90%), Postives = 51/73 (69.86%), Query Frame = 0
Query: 1 MSERGEWQNSKEKDGGQMKSSGDRQLYPYPYPYPYPGPFFTPQTPASRSKIKNNFLKTGT 60
MSER + Q SK+KDG +MKS +R+ P PYPG ++ Q PASRS +KN FL TG
Sbjct: 6 MSERSDKQKSKDKDGEKMKSGAERK--SKPCTTPYPGYSYSSQYPASRSALKNQFLSTGN 65
Query: 61 IGIAANSSSTTNK 74
GIAANSSSTTNK
Sbjct: 66 FGIAANSSSTTNK 76
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KAE8651988.1 | 8.2e-10 | 58.90 | hypothetical protein Csa_016955 [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
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| Match Name | E-value | Identity | Description | |
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InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..28 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..19 |
Relationships
The following mRNA feature(s) are a part of this gene:
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