Homology
BLAST of Cmc10g0281931 vs. NCBI nr
Match:
TYK03188.1 (gag/pol protein [Cucumis melo var. makuwa])
HSP 1 Score: 826.6 bits (2134), Expect = 1.0e-235
Identity = 421/459 (91.72%), Postives = 423/459 (92.16%), Query Frame = 0
Query: 1 MLVTNPKKLEPRSRLCQFVGCLKETRGGLFFDPQENRVFVSINATFLEEDHMRDHKPRRK 60
MLVTNPKKLEPRSRLCQFVGCLKETRGGLFFDPQENRVFVS NATFLEEDHMRDHKPRRK
Sbjct: 1 MLVTNPKKLEPRSRLCQFVGCLKETRGGLFFDPQENRVFVSKNATFLEEDHMRDHKPRRK 60
Query: 61 LVLNEATDESTRDVDEVGPSSKVDETTTSGQSHPSQSLRMPRRSGRIVSQPNRYLGLTET 120
LVLNEATDESTRDVDEVGPSSKVDETTTSGQSHPSQSLRMPRRSGRIVSQPN YLGLTET
Sbjct: 61 LVLNEATDESTRDVDEVGPSSKVDETTTSGQSHPSQSLRMPRRSGRIVSQPNPYLGLTET 120
Query: 121 HVVILDNGVEDPLSYKQAMNDVDKDQWVKAMDLEIESMYFNSVWE--------------- 180
VVILDNGVEDPLSYKQAMNDVDKDQWVKAMDLEIESMYFNSVWE
Sbjct: 121 QVVILDNGVEDPLSYKQAMNDVDKDQWVKAMDLEIESMYFNSVWEVVDLSEGVKPIGCKW 180
Query: 181 -------------TFKARLVAKVYTQREGVDYEETFSPVAMLKSIRILLSIAAFYNYEIW 240
TFKARLVAKVYTQREGVDYEETF PV+MLKSIR+LLSI AFYNYEIW
Sbjct: 181 IYKRKRDSAGKVQTFKARLVAKVYTQREGVDYEETFFPVSMLKSIRVLLSIVAFYNYEIW 240
Query: 241 KMDVKTAFLNDNLEEIIFISQPEGFITQGQEQKVCKLNRSIYGFKQASRSWNIRFDTAIK 300
KMDVKTAFLNDNLEEIIFISQPEGFITQGQEQKVCKLNRSIYGFKQASRSWNIRFDTAIK
Sbjct: 241 KMDVKTAFLNDNLEEIIFISQPEGFITQGQEQKVCKLNRSIYGFKQASRSWNIRFDTAIK 300
Query: 301 SYGFDQNVDEPCVYKKNNKGKVAFLVLYVDDILLIENDVGYLTDVKAWLVAQFQIKDLGE 360
SYGFDQNVDEPCVYKKNNKGKVAFLVLYVDDILLIENDVGYLTDVKAWLVAQFQIKDLGE
Sbjct: 301 SYGFDQNVDEPCVYKKNNKGKVAFLVLYVDDILLIENDVGYLTDVKAWLVAQFQIKDLGE 360
Query: 361 AQYVLGIQIIRDRKKKMLALSQATYIDKMLVRYLMQNSKKGLLPFRHGVHLSKEQCPKTP 420
AQYVLGIQIIRDRKKKMLALSQATYIDKMLVRYLMQNSKKGLLPFRHGVHLSKEQCPKTP
Sbjct: 361 AQYVLGIQIIRDRKKKMLALSQATYIDKMLVRYLMQNSKKGLLPFRHGVHLSKEQCPKTP 420
Query: 421 QEVEYMRRILYALAVGSLMYVMLCIKPDICYAVGIVSRY 432
QEVE MRRI YALAVGSLMY MLCIKPDICYAVGIVSRY
Sbjct: 421 QEVEDMRRIPYALAVGSLMYAMLCIKPDICYAVGIVSRY 459
BLAST of Cmc10g0281931 vs. NCBI nr
Match:
KAA0056325.1 (gag/pol protein [Cucumis melo var. makuwa])
HSP 1 Score: 823.9 bits (2127), Expect = 6.6e-235
Identity = 420/458 (91.70%), Postives = 422/458 (92.14%), Query Frame = 0
Query: 1 MLVTNPKKLEPRSRLCQFVGCLKETRGGLFFDPQENRVFVSINATFLEEDHMRDHKPRRK 60
MLVTNPKKLEPRSRLCQFVGCLKETRGGLFFDPQENRVFVS NATFLEEDHMRDHKPRRK
Sbjct: 1 MLVTNPKKLEPRSRLCQFVGCLKETRGGLFFDPQENRVFVSKNATFLEEDHMRDHKPRRK 60
Query: 61 LVLNEATDESTRDVDEVGPSSKVDETTTSGQSHPSQSLRMPRRSGRIVSQPNRYLGLTET 120
LVLNEATDESTRDVDEVGPSSKVDETTTSGQSHPSQSLRMPRRSGRIVSQPN YLGLTET
Sbjct: 61 LVLNEATDESTRDVDEVGPSSKVDETTTSGQSHPSQSLRMPRRSGRIVSQPNPYLGLTET 120
Query: 121 HVVILDNGVEDPLSYKQAMNDVDKDQWVKAMDLEIESMYFNSVWE--------------- 180
VVILDNGVEDPLSYKQAMNDVDKDQWVKAMDLEIESMYFNSVWE
Sbjct: 121 QVVILDNGVEDPLSYKQAMNDVDKDQWVKAMDLEIESMYFNSVWEVVDLSEGVKPIGCKW 180
Query: 181 -------------TFKARLVAKVYTQREGVDYEETFSPVAMLKSIRILLSIAAFYNYEIW 240
TFKARLVAKVYTQREGVDYEETF PV+MLKSIR+LLSI AFYNYEIW
Sbjct: 181 IYKRKRDSAGKVQTFKARLVAKVYTQREGVDYEETFFPVSMLKSIRVLLSIVAFYNYEIW 240
Query: 241 KMDVKTAFLNDNLEEIIFISQPEGFITQGQEQKVCKLNRSIYGFKQASRSWNIRFDTAIK 300
KMDVKTAFLNDNLEEIIFISQPEGFITQGQEQKVCKLNRSIYGFKQASRSWNIRFDTAIK
Sbjct: 241 KMDVKTAFLNDNLEEIIFISQPEGFITQGQEQKVCKLNRSIYGFKQASRSWNIRFDTAIK 300
Query: 301 SYGFDQNVDEPCVYKKNNKGKVAFLVLYVDDILLIENDVGYLTDVKAWLVAQFQIKDLGE 360
SYGFDQNVDEPCVYKKNNKGKVAFLVLYVDDILLIENDVGYLTDVKAWLVAQFQIKDLGE
Sbjct: 301 SYGFDQNVDEPCVYKKNNKGKVAFLVLYVDDILLIENDVGYLTDVKAWLVAQFQIKDLGE 360
Query: 361 AQYVLGIQIIRDRKKKMLALSQATYIDKMLVRYLMQNSKKGLLPFRHGVHLSKEQCPKTP 420
AQYVLGIQIIRDRKKKMLALSQATYIDKMLVRYLMQNSKKGLLPFRHGVHLSKEQCPKTP
Sbjct: 361 AQYVLGIQIIRDRKKKMLALSQATYIDKMLVRYLMQNSKKGLLPFRHGVHLSKEQCPKTP 420
Query: 421 QEVEYMRRILYALAVGSLMYVMLCIKPDICYAVGIVSR 431
QEVE MRRI YALAVGSLMY MLCIKPDICYAVGIVSR
Sbjct: 421 QEVEDMRRIPYALAVGSLMYAMLCIKPDICYAVGIVSR 458
BLAST of Cmc10g0281931 vs. NCBI nr
Match:
KAA0025945.1 (gag/pol protein [Cucumis melo var. makuwa] >KAA0026303.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0035786.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0040492.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0041262.1 gag/pol protein [Cucumis melo var. makuwa])
HSP 1 Score: 797.7 bits (2059), Expect = 5.1e-227
Identity = 408/478 (85.36%), Postives = 422/478 (88.28%), Query Frame = 0
Query: 1 MLVTNPKKLEPRSRLCQFVGCLKETRGGLFFDPQENRVFVSINATFLEEDHMRDHKPRRK 60
+LVTNPKKLEPRSRLCQFVG KETRGGLFFDPQENRVFVS NATFLEEDHMR+HKPR K
Sbjct: 582 VLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRSK 641
Query: 61 LVLNEATDESTRDVDEVGPSSKVDETTTSGQSHPSQSLRMPRRSGRIVSQPNRYLGLTET 120
LVL+EATDESTR VDEVGPSS+VDETTTSGQSHPSQSLRMPRRSGR+VSQPNRYLGLTET
Sbjct: 642 LVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTET 701
Query: 121 HVVILDNGVEDPLSYKQAMNDVDKDQWVKAMDLEIESMYFNSVWE--------------- 180
VVI D+GVEDPLSYKQAMNDVDKDQWVKAMDLE+ESMYFNSVWE
Sbjct: 702 QVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKW 761
Query: 181 -------------TFKARLVAKVYTQREGVDYEETFSPVAMLKSIRILLSIAAFYNYEIW 240
TFKARLVAK YTQREGVDYEETFSPVAMLKSIRILLSIA FY+YEIW
Sbjct: 762 IYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIW 821
Query: 241 KMDVKTAFLNDNLEEIIFISQPEGFITQGQEQKVCKLNRSIYGFKQASRSWNIRFDTAIK 300
+MDVKTAFLN NLEE IF+SQPEGFITQGQEQKVCKLNRSIYG KQASRSWNIRFDTAIK
Sbjct: 822 QMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIK 881
Query: 301 SYGFDQNVDEPCVYKKNNKGKVAFLVLYVDDILLIENDVGYLTDVKAWLVAQFQIKDLGE 360
SYGFDQNVDEPCVYKK NKGKVAFLVLYVDDILLI NDVGYLTDVKAWL AQFQ+KDLGE
Sbjct: 882 SYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGE 941
Query: 361 AQYVLGIQIIRDRKKKMLALSQATYIDKMLVRYLMQNSKKGLLPFRHGVHLSKEQCPKTP 420
AQYVLGIQIIRDRK K LALSQATYIDK+LVRY MQNSKKGLLPFRHGVHLSKEQ PKTP
Sbjct: 942 AQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTP 1001
Query: 421 QEVEYMRRILYALAVGSLMYVMLCIKPDICYAVGIVSRYQSNLGLDHWTTVKIILSIL 451
QEVE MRRI YA AVGSLMY MLC +PDICYAVGIVSRYQSN GLDHWT VKI+L L
Sbjct: 1002 QEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYL 1059
BLAST of Cmc10g0281931 vs. NCBI nr
Match:
KAA0059226.1 (gag/pol protein [Cucumis melo var. makuwa])
HSP 1 Score: 797.7 bits (2059), Expect = 5.1e-227
Identity = 408/478 (85.36%), Postives = 422/478 (88.28%), Query Frame = 0
Query: 1 MLVTNPKKLEPRSRLCQFVGCLKETRGGLFFDPQENRVFVSINATFLEEDHMRDHKPRRK 60
+LVTNPKKLEPRSRLCQFVG KETRGGLFFDPQENRVFVS NATFLEEDHMR+HKPR K
Sbjct: 456 VLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRSK 515
Query: 61 LVLNEATDESTRDVDEVGPSSKVDETTTSGQSHPSQSLRMPRRSGRIVSQPNRYLGLTET 120
LVL+EATDESTR VDEVGPSS+VDETTTSGQSHPSQSLRMPRRSGR+VSQPNRYLGLTET
Sbjct: 516 LVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTET 575
Query: 121 HVVILDNGVEDPLSYKQAMNDVDKDQWVKAMDLEIESMYFNSVWE--------------- 180
VVI D+GVEDPLSYKQAMNDVDKDQWVKAMDLE+ESMYFNSVWE
Sbjct: 576 QVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKW 635
Query: 181 -------------TFKARLVAKVYTQREGVDYEETFSPVAMLKSIRILLSIAAFYNYEIW 240
TFKARLVAK YTQREGVDYEETFSPVAMLKSIRILLSIA FY+YEIW
Sbjct: 636 IYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIW 695
Query: 241 KMDVKTAFLNDNLEEIIFISQPEGFITQGQEQKVCKLNRSIYGFKQASRSWNIRFDTAIK 300
+MDVKTAFLN NLEE IF+SQPEGFITQGQEQKVCKLNRSIYG KQASRSWNIRFDTAIK
Sbjct: 696 QMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIK 755
Query: 301 SYGFDQNVDEPCVYKKNNKGKVAFLVLYVDDILLIENDVGYLTDVKAWLVAQFQIKDLGE 360
SYGFDQNVDEPCVYKK NKGKVAFLVLYVDDILLI NDVGYLTDVKAWL AQFQ+KDLGE
Sbjct: 756 SYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGE 815
Query: 361 AQYVLGIQIIRDRKKKMLALSQATYIDKMLVRYLMQNSKKGLLPFRHGVHLSKEQCPKTP 420
AQYVLGIQIIRDRK K LALSQATYIDK+LVRY MQNSKKGLLPFRHGVHLSKEQ PKTP
Sbjct: 816 AQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTP 875
Query: 421 QEVEYMRRILYALAVGSLMYVMLCIKPDICYAVGIVSRYQSNLGLDHWTTVKIILSIL 451
QEVE MRRI YA AVGSLMY MLC +PDICYAVGIVSRYQSN GLDHWT VKI+L L
Sbjct: 876 QEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYL 933
BLAST of Cmc10g0281931 vs. NCBI nr
Match:
KAA0035907.1 (gag/pol protein [Cucumis melo var. makuwa])
HSP 1 Score: 788.9 bits (2036), Expect = 2.4e-224
Identity = 404/478 (84.52%), Postives = 420/478 (87.87%), Query Frame = 0
Query: 1 MLVTNPKKLEPRSRLCQFVGCLKETRGGLFFDPQENRVFVSINATFLEEDHMRDHKPRRK 60
+LVTNPKKLEPRSRLCQFVG KETRGGLFFDP+ENRVFVS NATFLEEDHMR+HKPR K
Sbjct: 582 VLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPKENRVFVSTNATFLEEDHMRNHKPRSK 641
Query: 61 LVLNEATDESTRDVDEVGPSSKVDETTTSGQSHPSQSLRMPRRSGRIVSQPNRYLGLTET 120
LVL+EATDESTR VDEVGPSS+VDETTTSGQSHPSQSLRMPRRSGR+VSQPNRYLGLTET
Sbjct: 642 LVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTET 701
Query: 121 HVVILDNGVEDPLSYKQAMNDVDKDQWVKAMDLEIESMYFNSVWE--------------- 180
VVI D+GVEDPLSYKQAMNDVDKDQWVKAMDLE+ESMYFNSVWE
Sbjct: 702 QVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKW 761
Query: 181 -------------TFKARLVAKVYTQREGVDYEETFSPVAMLKSIRILLSIAAFYNYEIW 240
TFKARLVAK YT++EGVDYEETFS VAMLKSIRILLSIA FY+YEIW
Sbjct: 762 IYKRKRDSAGKVQTFKARLVAKGYTRKEGVDYEETFSSVAMLKSIRILLSIAKFYDYEIW 821
Query: 241 KMDVKTAFLNDNLEEIIFISQPEGFITQGQEQKVCKLNRSIYGFKQASRSWNIRFDTAIK 300
+MDVKTAFLN NLEE IF+SQPEGFITQGQEQKVCKLNRSIYG KQASRSWNIRFDTAIK
Sbjct: 822 QMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIK 881
Query: 301 SYGFDQNVDEPCVYKKNNKGKVAFLVLYVDDILLIENDVGYLTDVKAWLVAQFQIKDLGE 360
SYGFDQNVDEPCVYKK NKGKVAFLVLYVDDILLI NDVGYLTDVKAWL AQFQ+KDLGE
Sbjct: 882 SYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGE 941
Query: 361 AQYVLGIQIIRDRKKKMLALSQATYIDKMLVRYLMQNSKKGLLPFRHGVHLSKEQCPKTP 420
QYVLGIQIIRDRK K LALSQATYIDK+LVRY MQNSKKGLLPFRHGVHLSKEQ PKTP
Sbjct: 942 GQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTP 1001
Query: 421 QEVEYMRRILYALAVGSLMYVMLCIKPDICYAVGIVSRYQSNLGLDHWTTVKIILSIL 451
QEVE MRRI YA AVGSLMY MLC +PDICYAVGIVSRYQSN GLDHWT VKIIL L
Sbjct: 1002 QEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIILKYL 1059
BLAST of Cmc10g0281931 vs. ExPASy Swiss-Prot
Match:
P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)
HSP 1 Score: 288.5 bits (737), Expect = 1.3e-76
Identity = 179/498 (35.94%), Postives = 274/498 (55.02%), Query Frame = 0
Query: 8 KLEPRSRLCQFVGCLKETRGGLFFDPQENRVFVSINATFLEEDHM----RDHKPRRKLVL 67
KL+ +S C F+G E G +DP + +V S + F E + K + ++
Sbjct: 666 KLDDKSIPCIFIGYGDEEFGYRLWDPVKKKVIRSRDVVFRESEVRTAADMSEKVKNGIIP 725
Query: 68 NEATDESTRDVDEVGPSSKVDETTTSGQ-------------------SHPSQSLRMP--- 127
N T ST + + S DE + G+ HP+Q
Sbjct: 726 NFVTIPSTSN-NPTSAESTTDEVSEQGEQPGEVIEQGEQLDEGVEEVEHPTQGEEQHQPL 785
Query: 128 RRSGRIVSQPNRYLGLTETHVVILDNGVEDPLSYKQAMNDVDKDQWVKAMDLEIESMYFN 187
RRS R + RY + +V+I D+ +P S K+ ++ +K+Q +KAM E+ES+ N
Sbjct: 786 RRSERPRVESRRY--PSTEYVLISDD--REPESLKEVLSHPEKNQLMKAMQEEMESLQKN 845
Query: 188 SVWE----------------------------TFKARLVAKVYTQREGVDYEETFSPVAM 247
++ +KARLV K + Q++G+D++E FSPV
Sbjct: 846 GTYKLVELPKGKRPLKCKWVFKLKKDGDCKLVRYKARLVVKGFEQKKGIDFDEIFSPVVK 905
Query: 248 LKSIRILLSIAAFYNYEIWKMDVKTAFLNDNLEEIIFISQPEGFITQGQEQKVCKLNRSI 307
+ SIR +LS+AA + E+ ++DVKTAFL+ +LEE I++ QPEGF G++ VCKLN+S+
Sbjct: 906 MTSIRTILSLAASLDLEVEQLDVKTAFLHGDLEEEIYMEQPEGFEVAGKKHMVCKLNKSL 965
Query: 308 YGFKQASRSWNIRFDTAIKSYGFDQNVDEPCVY-KKNNKGKVAFLVLYVDDILLIENDVG 367
YG KQA R W ++FD+ +KS + + +PCVY K+ ++ L+LYVDD+L++ D G
Sbjct: 966 YGLKQAPRQWYMKFDSFMKSQTYLKTYSDPCVYFKRFSENNFIILLLYVDDMLIVGKDKG 1025
Query: 368 YLTDVKAWLVAQFQIKDLGEAQYVLGIQIIRDRKKKMLALSQATYIDKMLVRYLMQNSKK 427
+ +K L F +KDLG AQ +LG++I+R+R + L LSQ YI+++L R+ M+N+K
Sbjct: 1026 LIAKLKGDLSKSFDMKDLGPAQQILGMKIVRERTSRKLWLSQEKYIERVLERFNMKNAKP 1085
Query: 428 GLLPFRHGVHLSKEQCPKTPQEVEYMRRILYALAVGSLMYVMLCIKPDICYAVGIVSRYQ 451
P + LSK+ CP T +E M ++ Y+ AVGSLMY M+C +PDI +AVG+VSR+
Sbjct: 1086 VSTPLAGHLKLSKKMCPTTVEEKGNMAKVPYSSAVGSLMYAMVCTRPDIAHAVGVVSRFL 1145
BLAST of Cmc10g0281931 vs. ExPASy Swiss-Prot
Match:
P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)
HSP 1 Score: 193.4 bits (490), Expect = 5.7e-48
Identity = 137/477 (28.72%), Postives = 240/477 (50.31%), Query Frame = 0
Query: 13 SRLCQFVGCLKETRGGLFFDPQENRVFVSINATFLEEDHMRDHKPRRKLVLNEATDESTR 72
S+ C + LK+++ + N+ F++ + +DH+ + K NE+ + T
Sbjct: 784 SKECDNIQFLKDSK-------ESNKYFLNESKKRKRDDHLNESKGSGN--PNESRESETA 843
Query: 73 D-VDEVGPSSKVDETTTSGQSHPSQSLRMPRRSGRIVSQPNRYLGLTETHV--VILDNGV 132
+ + E+G +D T + + RRS R+ ++P + + V+L+
Sbjct: 844 EHLKEIG----IDNPTKNDGIE-----IINRRSERLKTKPQISYNEEDNSLNKVVLNAHT 903
Query: 133 ---EDPLSYKQAMNDVDKDQWVKAMDLEIESMYFNSVWE--------------------- 192
+ P S+ + DK W +A++ E+ + N+ W
Sbjct: 904 IFNDVPNSFDEIQYRDDKSSWEEAINTELNAHKINNTWTITKRPENKNIVDSRWVFSVKY 963
Query: 193 -------TFKARLVAKVYTQREGVDYEETFSPVAMLKSIRILLSIAAFYNYEIWKMDVKT 252
+KARLVA+ +TQ+ +DYEETF+PVA + S R +LS+ YN ++ +MDVKT
Sbjct: 964 NELGNPIRYKARLVARGFTQKYQIDYEETFAPVARISSFRFILSLVIQYNLKVHQMDVKT 1023
Query: 253 AFLNDNLEEIIFISQPEGFITQGQEQKVCKLNRSIYGFKQASRSWNIRFDTAIKSYGFDQ 312
AFLN L+E I++ P+G VCKLN++IYG KQA+R W F+ A+K F
Sbjct: 1024 AFLNGTLKEEIYMRLPQGI--SCNSDNVCKLNKAIYGLKQAARCWFEVFEQALKECEFVN 1083
Query: 313 NVDEPCVY--KKNNKGKVAFLVLYVDDILLIENDVGYLTDVKAWLVAQFQIKDLGEAQYV 372
+ + C+Y K N + +++LYVDD+++ D+ + + K +L+ +F++ DL E ++
Sbjct: 1084 SSVDRCIYILDKGNINENIYVLLYVDDVVIATGDMTRMNNFKRYLMEKFRMTDLNEIKHF 1143
Query: 373 LGIQIIRDRKKKMLALSQATYIDKMLVRYLMQNSKKGLLPFRHGVH---LSKEQCPKTPQ 432
+GI+I + ++ + LSQ+ Y+ K+L ++ M+N P ++ L+ ++ TP
Sbjct: 1144 IGIRI--EMQEDKIYLSQSAYVKKILSKFNMENCNAVSTPLPSKINYELLNSDEDCNTP- 1203
Query: 433 EVEYMRRILYALAVGSLMYVMLCIKPDICYAVGIVSRYQSNLGLDHWTTVKIILSIL 451
+G LMY+MLC +PD+ AV I+SRY S + W +K +L L
Sbjct: 1204 ---------CRSLIGCLMYIMLCTRPDLTTAVNILSRYSSKNNSELWQNLKRVLRYL 1228
BLAST of Cmc10g0281931 vs. ExPASy Swiss-Prot
Match:
Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)
HSP 1 Score: 174.5 bits (441), Expect = 2.8e-42
Identity = 114/349 (32.66%), Postives = 169/349 (48.42%), Query Frame = 0
Query: 131 DPLSYKQAMNDVDKDQWVKAMDLEIESMYFNSVWE------------------------- 190
+P + QAM D D+W +AM EI + N W+
Sbjct: 938 EPRTAIQAMKD---DRWRQAMGSEINAQIGNHTWDLVPPPPPSVTIVGCRWIFTKKFNSD 997
Query: 191 ----TFKARLVAKVYTQREGVDYEETFSPVAMLKSIRILLSIAAFYNYEIWKMDVKTAFL 250
+KARLVAK Y QR G+DY ETFSPV SIRI+L +A ++ I ++DV AFL
Sbjct: 998 GSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFL 1057
Query: 251 NDNLEEIIFISQPEGFITQGQEQKVCKLNRSIYGFKQASRSWNIRFDTAIKSYGFDQNVD 310
L + +++SQP GF+ + + VC+L ++IYG KQA R+W + T + + GF ++
Sbjct: 1058 QGTLTDEVYMSQPPGFVDKDRPDYVCRLRKAIYGLKQAPRAWYVELRTYLLTVGFVNSIS 1117
Query: 311 EPCVYKKNNKGKVAFLVLYVDDILLIENDVGYLTDVKAWLVAQFQIKDLGEAQYVLGIQI 370
+ ++ + ++++YVDDIL+ ND L L +F +K+ + Y LGI+
Sbjct: 1118 DTSLFVLQRGRSIIYMLVYVDDILITGNDTVLLKHTLDALSQRFSVKEHEDLHYFLGIE- 1177
Query: 371 IRDRKKKMLALSQATYIDKMLVRYLMQNSKKGLLPFRHGVHLSKEQCPKTPQEVEYMRRI 430
R + L LSQ Y +L R M +K P L+ K P EY
Sbjct: 1178 -AKRVPQGLHLSQRRYTLDLLARTNMLTAKPVATPMATSPKLTLHSGTKLPDPTEYRG-- 1237
Query: 431 LYALAVGSLMYVMLCIKPDICYAVGIVSRYQSNLGLDHWTTVKIILSIL 451
VGSL Y+ +PD+ YAV +S+Y DHW +K +L L
Sbjct: 1238 ----IVGSLQYLAF-TRPDLSYAVNRLSQYMHMPTDDHWNALKRVLRYL 1274
BLAST of Cmc10g0281931 vs. ExPASy Swiss-Prot
Match:
Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)
HSP 1 Score: 164.5 bits (415), Expect = 2.9e-39
Identity = 115/349 (32.95%), Postives = 166/349 (47.56%), Query Frame = 0
Query: 131 DPLSYKQAMNDVDKDQWVKAMDLEIESMYFNSVWE------------------------- 190
+P + QA+ D ++W AM EI + N W+
Sbjct: 955 EPRTAIQALKD---ERWRNAMGSEINAQIGNHTWDLVPPPPSHVTIVGCRWIFTKKYNSD 1014
Query: 191 ----TFKARLVAKVYTQREGVDYEETFSPVAMLKSIRILLSIAAFYNYEIWKMDVKTAFL 250
+KARLVAK Y QR G+DY ETFSPV SIRI+L +A ++ I ++DV AFL
Sbjct: 1015 GSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFL 1074
Query: 251 NDNLEEIIFISQPEGFITQGQEQKVCKLNRSIYGFKQASRSWNIRFDTAIKSYGFDQNVD 310
L + +++SQP GFI + + VCKL +++YG KQA R+W + + + GF +V
Sbjct: 1075 QGTLTDDVYMSQPPGFIDKDRPNYVCKLRKALYGLKQAPRAWYVELRNYLLTIGFVNSVS 1134
Query: 311 EPCVYKKNNKGKVAFLVLYVDDILLIENDVGYLTDVKAWLVAQFQIKDLGEAQYVLGIQI 370
+ ++ + ++++YVDDIL+ ND L + L +F +KD E Y LGI+
Sbjct: 1135 DTSLFVLQRGKSIVYMLVYVDDILITGNDPTLLHNTLDNLSQRFSVKDHEELHYFLGIE- 1194
Query: 371 IRDRKKKMLALSQATYIDKMLVRYLMQNSKKGLLPFRHGVHLSKEQCPKTPQEVEYMRRI 430
R L LSQ YI +L R M +K P LS K EY
Sbjct: 1195 -AKRVPTGLHLSQRRYILDLLARTNMITAKPVTTPMAPSPKLSLYSGTKLTDPTEYRG-- 1254
Query: 431 LYALAVGSLMYVMLCIKPDICYAVGIVSRYQSNLGLDHWTTVKIILSIL 451
VGSL Y+ +PDI YAV +S++ +H +K IL L
Sbjct: 1255 ----IVGSLQYLAF-TRPDISYAVNRLSQFMHMPTEEHLQALKRILRYL 1291
BLAST of Cmc10g0281931 vs. ExPASy Swiss-Prot
Match:
P25600 (Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY5A PE=5 SV=2)
HSP 1 Score: 95.5 bits (236), Expect = 1.6e-18
Identity = 66/237 (27.85%), Postives = 103/237 (43.46%), Query Frame = 0
Query: 214 MDVKTAFLNDNLEEIIFISQPEGFITQGQEQKVCKLNRSIYGFKQASRSWNIRFDTAIKS 273
MDV TAFLN ++E I++ QP GF+ + V +L +YG KQA WN + +K
Sbjct: 1 MDVDTAFLNSTMDEPIYVKQPPGFVNERNPDYVWELYGGMYGLKQAPLLWNEHINNTLKK 60
Query: 274 YGFDQNVDEPCVYKKNNKGKVAFLVLYVDDILLIENDVGYLTDVKAWLVAQFQIKDLGEA 333
GF ++ E +Y ++ ++ +YVDD+L+ VK L + +KDLG+
Sbjct: 61 IGFCRHEGEHGLYFRSTSDGPIYIAVYVDDLLVAAPSPKIYDRVKQELTKLYSMKDLGKV 120
Query: 334 QYVLGIQIIRDRKKKMLALSQATYIDKMLVRYLMQNSKKGLLPFRHGVHLSKEQCPKTPQ 393
LG+ I + LS YI K + K P + L + P
Sbjct: 121 DKFLGLN-IHQSSNGDITLSLQDYIAKAASESEINTFKLTQTPLCNSKPLFETTSPHLKD 180
Query: 394 EVEYMRRILYALAVGSLMYVMLCIKPDICYAVGIVSRYQSNLGLDHWTTVKIILSIL 451
Y VG L++ +PDI Y V ++SR+ H + + +L L
Sbjct: 181 ITPYQS------IVGQLLFCANTGRPDISYPVSLLSRFLREPRAIHLESARRVLRYL 230
BLAST of Cmc10g0281931 vs. ExPASy TrEMBL
Match:
A0A5D3BW42 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11G00940 PE=4 SV=1)
HSP 1 Score: 826.6 bits (2134), Expect = 4.9e-236
Identity = 421/459 (91.72%), Postives = 423/459 (92.16%), Query Frame = 0
Query: 1 MLVTNPKKLEPRSRLCQFVGCLKETRGGLFFDPQENRVFVSINATFLEEDHMRDHKPRRK 60
MLVTNPKKLEPRSRLCQFVGCLKETRGGLFFDPQENRVFVS NATFLEEDHMRDHKPRRK
Sbjct: 1 MLVTNPKKLEPRSRLCQFVGCLKETRGGLFFDPQENRVFVSKNATFLEEDHMRDHKPRRK 60
Query: 61 LVLNEATDESTRDVDEVGPSSKVDETTTSGQSHPSQSLRMPRRSGRIVSQPNRYLGLTET 120
LVLNEATDESTRDVDEVGPSSKVDETTTSGQSHPSQSLRMPRRSGRIVSQPN YLGLTET
Sbjct: 61 LVLNEATDESTRDVDEVGPSSKVDETTTSGQSHPSQSLRMPRRSGRIVSQPNPYLGLTET 120
Query: 121 HVVILDNGVEDPLSYKQAMNDVDKDQWVKAMDLEIESMYFNSVWE--------------- 180
VVILDNGVEDPLSYKQAMNDVDKDQWVKAMDLEIESMYFNSVWE
Sbjct: 121 QVVILDNGVEDPLSYKQAMNDVDKDQWVKAMDLEIESMYFNSVWEVVDLSEGVKPIGCKW 180
Query: 181 -------------TFKARLVAKVYTQREGVDYEETFSPVAMLKSIRILLSIAAFYNYEIW 240
TFKARLVAKVYTQREGVDYEETF PV+MLKSIR+LLSI AFYNYEIW
Sbjct: 181 IYKRKRDSAGKVQTFKARLVAKVYTQREGVDYEETFFPVSMLKSIRVLLSIVAFYNYEIW 240
Query: 241 KMDVKTAFLNDNLEEIIFISQPEGFITQGQEQKVCKLNRSIYGFKQASRSWNIRFDTAIK 300
KMDVKTAFLNDNLEEIIFISQPEGFITQGQEQKVCKLNRSIYGFKQASRSWNIRFDTAIK
Sbjct: 241 KMDVKTAFLNDNLEEIIFISQPEGFITQGQEQKVCKLNRSIYGFKQASRSWNIRFDTAIK 300
Query: 301 SYGFDQNVDEPCVYKKNNKGKVAFLVLYVDDILLIENDVGYLTDVKAWLVAQFQIKDLGE 360
SYGFDQNVDEPCVYKKNNKGKVAFLVLYVDDILLIENDVGYLTDVKAWLVAQFQIKDLGE
Sbjct: 301 SYGFDQNVDEPCVYKKNNKGKVAFLVLYVDDILLIENDVGYLTDVKAWLVAQFQIKDLGE 360
Query: 361 AQYVLGIQIIRDRKKKMLALSQATYIDKMLVRYLMQNSKKGLLPFRHGVHLSKEQCPKTP 420
AQYVLGIQIIRDRKKKMLALSQATYIDKMLVRYLMQNSKKGLLPFRHGVHLSKEQCPKTP
Sbjct: 361 AQYVLGIQIIRDRKKKMLALSQATYIDKMLVRYLMQNSKKGLLPFRHGVHLSKEQCPKTP 420
Query: 421 QEVEYMRRILYALAVGSLMYVMLCIKPDICYAVGIVSRY 432
QEVE MRRI YALAVGSLMY MLCIKPDICYAVGIVSRY
Sbjct: 421 QEVEDMRRIPYALAVGSLMYAMLCIKPDICYAVGIVSRY 459
BLAST of Cmc10g0281931 vs. ExPASy TrEMBL
Match:
A0A5A7URX4 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold186G00160 PE=4 SV=1)
HSP 1 Score: 823.9 bits (2127), Expect = 3.2e-235
Identity = 420/458 (91.70%), Postives = 422/458 (92.14%), Query Frame = 0
Query: 1 MLVTNPKKLEPRSRLCQFVGCLKETRGGLFFDPQENRVFVSINATFLEEDHMRDHKPRRK 60
MLVTNPKKLEPRSRLCQFVGCLKETRGGLFFDPQENRVFVS NATFLEEDHMRDHKPRRK
Sbjct: 1 MLVTNPKKLEPRSRLCQFVGCLKETRGGLFFDPQENRVFVSKNATFLEEDHMRDHKPRRK 60
Query: 61 LVLNEATDESTRDVDEVGPSSKVDETTTSGQSHPSQSLRMPRRSGRIVSQPNRYLGLTET 120
LVLNEATDESTRDVDEVGPSSKVDETTTSGQSHPSQSLRMPRRSGRIVSQPN YLGLTET
Sbjct: 61 LVLNEATDESTRDVDEVGPSSKVDETTTSGQSHPSQSLRMPRRSGRIVSQPNPYLGLTET 120
Query: 121 HVVILDNGVEDPLSYKQAMNDVDKDQWVKAMDLEIESMYFNSVWE--------------- 180
VVILDNGVEDPLSYKQAMNDVDKDQWVKAMDLEIESMYFNSVWE
Sbjct: 121 QVVILDNGVEDPLSYKQAMNDVDKDQWVKAMDLEIESMYFNSVWEVVDLSEGVKPIGCKW 180
Query: 181 -------------TFKARLVAKVYTQREGVDYEETFSPVAMLKSIRILLSIAAFYNYEIW 240
TFKARLVAKVYTQREGVDYEETF PV+MLKSIR+LLSI AFYNYEIW
Sbjct: 181 IYKRKRDSAGKVQTFKARLVAKVYTQREGVDYEETFFPVSMLKSIRVLLSIVAFYNYEIW 240
Query: 241 KMDVKTAFLNDNLEEIIFISQPEGFITQGQEQKVCKLNRSIYGFKQASRSWNIRFDTAIK 300
KMDVKTAFLNDNLEEIIFISQPEGFITQGQEQKVCKLNRSIYGFKQASRSWNIRFDTAIK
Sbjct: 241 KMDVKTAFLNDNLEEIIFISQPEGFITQGQEQKVCKLNRSIYGFKQASRSWNIRFDTAIK 300
Query: 301 SYGFDQNVDEPCVYKKNNKGKVAFLVLYVDDILLIENDVGYLTDVKAWLVAQFQIKDLGE 360
SYGFDQNVDEPCVYKKNNKGKVAFLVLYVDDILLIENDVGYLTDVKAWLVAQFQIKDLGE
Sbjct: 301 SYGFDQNVDEPCVYKKNNKGKVAFLVLYVDDILLIENDVGYLTDVKAWLVAQFQIKDLGE 360
Query: 361 AQYVLGIQIIRDRKKKMLALSQATYIDKMLVRYLMQNSKKGLLPFRHGVHLSKEQCPKTP 420
AQYVLGIQIIRDRKKKMLALSQATYIDKMLVRYLMQNSKKGLLPFRHGVHLSKEQCPKTP
Sbjct: 361 AQYVLGIQIIRDRKKKMLALSQATYIDKMLVRYLMQNSKKGLLPFRHGVHLSKEQCPKTP 420
Query: 421 QEVEYMRRILYALAVGSLMYVMLCIKPDICYAVGIVSR 431
QEVE MRRI YALAVGSLMY MLCIKPDICYAVGIVSR
Sbjct: 421 QEVEDMRRIPYALAVGSLMYAMLCIKPDICYAVGIVSR 458
BLAST of Cmc10g0281931 vs. ExPASy TrEMBL
Match:
A0A5A7TZD0 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G00090 PE=4 SV=1)
HSP 1 Score: 797.7 bits (2059), Expect = 2.5e-227
Identity = 408/478 (85.36%), Postives = 422/478 (88.28%), Query Frame = 0
Query: 1 MLVTNPKKLEPRSRLCQFVGCLKETRGGLFFDPQENRVFVSINATFLEEDHMRDHKPRRK 60
+LVTNPKKLEPRSRLCQFVG KETRGGLFFDPQENRVFVS NATFLEEDHMR+HKPR K
Sbjct: 582 VLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRSK 641
Query: 61 LVLNEATDESTRDVDEVGPSSKVDETTTSGQSHPSQSLRMPRRSGRIVSQPNRYLGLTET 120
LVL+EATDESTR VDEVGPSS+VDETTTSGQSHPSQSLRMPRRSGR+VSQPNRYLGLTET
Sbjct: 642 LVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTET 701
Query: 121 HVVILDNGVEDPLSYKQAMNDVDKDQWVKAMDLEIESMYFNSVWE--------------- 180
VVI D+GVEDPLSYKQAMNDVDKDQWVKAMDLE+ESMYFNSVWE
Sbjct: 702 QVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKW 761
Query: 181 -------------TFKARLVAKVYTQREGVDYEETFSPVAMLKSIRILLSIAAFYNYEIW 240
TFKARLVAK YTQREGVDYEETFSPVAMLKSIRILLSIA FY+YEIW
Sbjct: 762 IYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIW 821
Query: 241 KMDVKTAFLNDNLEEIIFISQPEGFITQGQEQKVCKLNRSIYGFKQASRSWNIRFDTAIK 300
+MDVKTAFLN NLEE IF+SQPEGFITQGQEQKVCKLNRSIYG KQASRSWNIRFDTAIK
Sbjct: 822 QMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIK 881
Query: 301 SYGFDQNVDEPCVYKKNNKGKVAFLVLYVDDILLIENDVGYLTDVKAWLVAQFQIKDLGE 360
SYGFDQNVDEPCVYKK NKGKVAFLVLYVDDILLI NDVGYLTDVKAWL AQFQ+KDLGE
Sbjct: 882 SYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGE 941
Query: 361 AQYVLGIQIIRDRKKKMLALSQATYIDKMLVRYLMQNSKKGLLPFRHGVHLSKEQCPKTP 420
AQYVLGIQIIRDRK K LALSQATYIDK+LVRY MQNSKKGLLPFRHGVHLSKEQ PKTP
Sbjct: 942 AQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTP 1001
Query: 421 QEVEYMRRILYALAVGSLMYVMLCIKPDICYAVGIVSRYQSNLGLDHWTTVKIILSIL 451
QEVE MRRI YA AVGSLMY MLC +PDICYAVGIVSRYQSN GLDHWT VKI+L L
Sbjct: 1002 QEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYL 1059
BLAST of Cmc10g0281931 vs. ExPASy TrEMBL
Match:
A0A5A7UYE8 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G001570 PE=4 SV=1)
HSP 1 Score: 797.7 bits (2059), Expect = 2.5e-227
Identity = 408/478 (85.36%), Postives = 422/478 (88.28%), Query Frame = 0
Query: 1 MLVTNPKKLEPRSRLCQFVGCLKETRGGLFFDPQENRVFVSINATFLEEDHMRDHKPRRK 60
+LVTNPKKLEPRSRLCQFVG KETRGGLFFDPQENRVFVS NATFLEEDHMR+HKPR K
Sbjct: 456 VLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRSK 515
Query: 61 LVLNEATDESTRDVDEVGPSSKVDETTTSGQSHPSQSLRMPRRSGRIVSQPNRYLGLTET 120
LVL+EATDESTR VDEVGPSS+VDETTTSGQSHPSQSLRMPRRSGR+VSQPNRYLGLTET
Sbjct: 516 LVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTET 575
Query: 121 HVVILDNGVEDPLSYKQAMNDVDKDQWVKAMDLEIESMYFNSVWE--------------- 180
VVI D+GVEDPLSYKQAMNDVDKDQWVKAMDLE+ESMYFNSVWE
Sbjct: 576 QVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKW 635
Query: 181 -------------TFKARLVAKVYTQREGVDYEETFSPVAMLKSIRILLSIAAFYNYEIW 240
TFKARLVAK YTQREGVDYEETFSPVAMLKSIRILLSIA FY+YEIW
Sbjct: 636 IYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIW 695
Query: 241 KMDVKTAFLNDNLEEIIFISQPEGFITQGQEQKVCKLNRSIYGFKQASRSWNIRFDTAIK 300
+MDVKTAFLN NLEE IF+SQPEGFITQGQEQKVCKLNRSIYG KQASRSWNIRFDTAIK
Sbjct: 696 QMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIK 755
Query: 301 SYGFDQNVDEPCVYKKNNKGKVAFLVLYVDDILLIENDVGYLTDVKAWLVAQFQIKDLGE 360
SYGFDQNVDEPCVYKK NKGKVAFLVLYVDDILLI NDVGYLTDVKAWL AQFQ+KDLGE
Sbjct: 756 SYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGE 815
Query: 361 AQYVLGIQIIRDRKKKMLALSQATYIDKMLVRYLMQNSKKGLLPFRHGVHLSKEQCPKTP 420
AQYVLGIQIIRDRK K LALSQATYIDK+LVRY MQNSKKGLLPFRHGVHLSKEQ PKTP
Sbjct: 816 AQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTP 875
Query: 421 QEVEYMRRILYALAVGSLMYVMLCIKPDICYAVGIVSRYQSNLGLDHWTTVKIILSIL 451
QEVE MRRI YA AVGSLMY MLC +PDICYAVGIVSRYQSN GLDHWT VKI+L L
Sbjct: 876 QEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYL 933
BLAST of Cmc10g0281931 vs. ExPASy TrEMBL
Match:
A0A5A7T2V9 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold56G00760 PE=4 SV=1)
HSP 1 Score: 788.9 bits (2036), Expect = 1.1e-224
Identity = 404/478 (84.52%), Postives = 420/478 (87.87%), Query Frame = 0
Query: 1 MLVTNPKKLEPRSRLCQFVGCLKETRGGLFFDPQENRVFVSINATFLEEDHMRDHKPRRK 60
+LVTNPKKLEPRSRLCQFVG KETRGGLFFDP+ENRVFVS NATFLEEDHMR+HKPR K
Sbjct: 582 VLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPKENRVFVSTNATFLEEDHMRNHKPRSK 641
Query: 61 LVLNEATDESTRDVDEVGPSSKVDETTTSGQSHPSQSLRMPRRSGRIVSQPNRYLGLTET 120
LVL+EATDESTR VDEVGPSS+VDETTTSGQSHPSQSLRMPRRSGR+VSQPNRYLGLTET
Sbjct: 642 LVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTET 701
Query: 121 HVVILDNGVEDPLSYKQAMNDVDKDQWVKAMDLEIESMYFNSVWE--------------- 180
VVI D+GVEDPLSYKQAMNDVDKDQWVKAMDLE+ESMYFNSVWE
Sbjct: 702 QVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKW 761
Query: 181 -------------TFKARLVAKVYTQREGVDYEETFSPVAMLKSIRILLSIAAFYNYEIW 240
TFKARLVAK YT++EGVDYEETFS VAMLKSIRILLSIA FY+YEIW
Sbjct: 762 IYKRKRDSAGKVQTFKARLVAKGYTRKEGVDYEETFSSVAMLKSIRILLSIAKFYDYEIW 821
Query: 241 KMDVKTAFLNDNLEEIIFISQPEGFITQGQEQKVCKLNRSIYGFKQASRSWNIRFDTAIK 300
+MDVKTAFLN NLEE IF+SQPEGFITQGQEQKVCKLNRSIYG KQASRSWNIRFDTAIK
Sbjct: 822 QMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIK 881
Query: 301 SYGFDQNVDEPCVYKKNNKGKVAFLVLYVDDILLIENDVGYLTDVKAWLVAQFQIKDLGE 360
SYGFDQNVDEPCVYKK NKGKVAFLVLYVDDILLI NDVGYLTDVKAWL AQFQ+KDLGE
Sbjct: 882 SYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGE 941
Query: 361 AQYVLGIQIIRDRKKKMLALSQATYIDKMLVRYLMQNSKKGLLPFRHGVHLSKEQCPKTP 420
QYVLGIQIIRDRK K LALSQATYIDK+LVRY MQNSKKGLLPFRHGVHLSKEQ PKTP
Sbjct: 942 GQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTP 1001
Query: 421 QEVEYMRRILYALAVGSLMYVMLCIKPDICYAVGIVSRYQSNLGLDHWTTVKIILSIL 451
QEVE MRRI YA AVGSLMY MLC +PDICYAVGIVSRYQSN GLDHWT VKIIL L
Sbjct: 1002 QEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIILKYL 1059
BLAST of Cmc10g0281931 vs. TAIR 10
Match:
AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )
HSP 1 Score: 157.5 bits (397), Expect = 2.5e-38
Identity = 107/350 (30.57%), Postives = 174/350 (49.71%), Query Frame = 0
Query: 130 EDPLSYKQAMNDVDKDQWVKAMDLEIESMYFNSVW------------------------- 189
++P +Y +A + W AMD EI +M W
Sbjct: 84 KEPSTYNEAKEFL---VWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSD 143
Query: 190 ---ETFKARLVAKVYTQREGVDYEETFSPVAMLKSIRILLSIAAFYNYEIWKMDVKTAFL 249
E +KARLVAK YTQ+EG+D+ ETFSPV L S++++L+I+A YN+ + ++D+ AFL
Sbjct: 144 GTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFL 203
Query: 250 NDNLEEIIFISQPEGFIT-QGQE---QKVCKLNRSIYGFKQASRSWNIRFDTAIKSYGFD 309
N +L+E I++ P G+ QG VC L +SIYG KQASR W ++F + +GF
Sbjct: 204 NGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFV 263
Query: 310 QNVDEPCVYKKNNKGKVAFLVLYVDDILLIENDVGYLTDVKAWLVAQFQIKDLGEAQYVL 369
Q+ + + K +++YVDDI++ N+ + ++K+ L + F+++DLG +Y L
Sbjct: 264 QSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFL 323
Query: 370 GIQIIRDRKKKMLALSQATYIDKMLVRYLMQNSKKGLLPFRHGVHLSKEQCPKTPQEVEY 429
G++I R + + Q Y +L + K +P V S ++
Sbjct: 324 GLEIARSAAG--INICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAH------SGGDF 383
Query: 430 MRRILYALAVGSLMYVMLCIKPDICYAVGIVSRYQSNLGLDHWTTVKIIL 448
+ Y +G LMY+ + + DI +AV +S++ L H V IL
Sbjct: 384 VDAKAYRRLIGRLMYLQI-TRLDISFAVNKLSQFSEAPRLAHQQAVMKIL 421
BLAST of Cmc10g0281931 vs. TAIR 10
Match:
ATMG00810.1 (DNA/RNA polymerases superfamily protein )
HSP 1 Score: 53.1 bits (126), Expect = 6.6e-07
Identity = 50/152 (32.89%), Postives = 71/152 (46.71%), Query Frame = 0
Query: 296 FLVLYVDDILLIENDVGYLTDVKAWLVAQFQIKDLGEAQYVLGIQIIRDRKKKMLALSQA 355
+L+LYVDDILL + L + L + F +KDLG Y LGIQI L LSQ
Sbjct: 2 YLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQI--KTHPSGLFLSQT 61
Query: 356 TYIDKMLVRYLMQNSKKGLLPFRHGVHLSKEQCPKTPQEVEYMRRILYALAVGSLMYVML 415
Y +++L M + K P ++ S K P ++ VG+L Y+ L
Sbjct: 62 KYAEQILNNAGMLDCKPMSTPLPLKLN-SSVSTAKYPDPSDFRS------IVGALQYLTL 121
Query: 416 CIKPDICYAVGIVSRYQSNLGLDHWTTVKIIL 448
+PDI YAV IV + L + +K +L
Sbjct: 122 -TRPDISYAVNIVCQRMHEPTLADFDLLKRVL 143
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
TYK03188.1 | 1.0e-235 | 91.72 | gag/pol protein [Cucumis melo var. makuwa] | [more] |
KAA0056325.1 | 6.6e-235 | 91.70 | gag/pol protein [Cucumis melo var. makuwa] | [more] |
KAA0025945.1 | 5.1e-227 | 85.36 | gag/pol protein [Cucumis melo var. makuwa] >KAA0026303.1 gag/pol protein [Cucumi... | [more] |
KAA0059226.1 | 5.1e-227 | 85.36 | gag/pol protein [Cucumis melo var. makuwa] | [more] |
KAA0035907.1 | 2.4e-224 | 84.52 | gag/pol protein [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |
P10978 | 1.3e-76 | 35.94 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... | [more] |
P04146 | 5.7e-48 | 28.72 | Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3 | [more] |
Q9ZT94 | 2.8e-42 | 32.66 | Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... | [more] |
Q94HW2 | 2.9e-39 | 32.95 | Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... | [more] |
P25600 | 1.6e-18 | 27.85 | Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain AT... | [more] |
Match Name | E-value | Identity | Description | |
A0A5D3BW42 | 4.9e-236 | 91.72 | Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11G00940... | [more] |
A0A5A7URX4 | 3.2e-235 | 91.70 | Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold186G0016... | [more] |
A0A5A7TZD0 | 2.5e-227 | 85.36 | Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G000... | [more] |
A0A5A7UYE8 | 2.5e-227 | 85.36 | Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G0015... | [more] |
A0A5A7T2V9 | 1.1e-224 | 84.52 | Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold56G00760... | [more] |
Match Name | E-value | Identity | Description | |
AT4G23160.1 | 2.5e-38 | 30.57 | cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | [more] |
ATMG00810.1 | 6.6e-07 | 32.89 | DNA/RNA polymerases superfamily protein | [more] |