Cmc10g0281251 (gene) Melon (Charmono) v1.1

Overview
NameCmc10g0281251
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionGag/pol protein
LocationCMiso1.1chr10: 19482466 .. 19482924 (-)
RNA-Seq ExpressionCmc10g0281251
SyntenyCmc10g0281251
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTCAAACATCTTATATAGACAAAATGTTGTCAAGATATAAGATGCGGAATTCCAAAATGGGTCTACTGTCGAACATATATGAAATTCATTTATTAAAAGAACAATGTCCAAGGACACCTCAAGAAGTCGAGGATATGAGTAACATACCCTATGCTTCTACTGTTGGGAGCCTGATGTATGCAATGTTGTGTACTAGTCCTGACATTTGCTATTCAGTGTGGATAATTAGCAGGTATCAGCCCAATCCTGGACGTGATCATTGGACAGCCGTTAAGAATATTCTAAAATATCTTAGAAGAACAAAAGACTACATGCTTGTGTATAGTTCTAAGGATATGATCCTTACTGGATACACTGACTCCGATTTTCAAACTGATAAAGATGCTAGAAATTCTACATCAGGATCAGTTTTCACTTTGAATGAAGGAGCAGTAGTTTGGAGAAGCATAAAATAA

mRNA sequence

ATGTCTCAAACATCTTATATAGACAAAATGTTGTCAAGATATAAGATGCGGAATTCCAAAATGGGTCTACTGTCGAACATATATGAAATTCATTTATTAAAAGAACAATGTCCAAGGACACCTCAAGAAGTCGAGGATATGAGTAACATACCCTATGCTTCTACTGTTGGGAGCCTGATGTATGCAATGTTGTGTACTAGTCCTGACATTTGCTATTCAGTGTGGATAATTAGCAGGTATCAGCCCAATCCTGGACGTGATCATTGGACAGCCGTTAAGAATATTCTAAAATATCTTAGAAGAACAAAAGACTACATGCTTGTGTATAGTTCTAAGGATATGATCCTTACTGGATACACTGACTCCGATTTTCAAACTGATAAAGATGCTAGAAATTCTACATCAGGATCAGTTTTCACTTTGAATGAAGGAGCAGTAGTTTGGAGAAGCATAAAATAA

Coding sequence (CDS)

ATGTCTCAAACATCTTATATAGACAAAATGTTGTCAAGATATAAGATGCGGAATTCCAAAATGGGTCTACTGTCGAACATATATGAAATTCATTTATTAAAAGAACAATGTCCAAGGACACCTCAAGAAGTCGAGGATATGAGTAACATACCCTATGCTTCTACTGTTGGGAGCCTGATGTATGCAATGTTGTGTACTAGTCCTGACATTTGCTATTCAGTGTGGATAATTAGCAGGTATCAGCCCAATCCTGGACGTGATCATTGGACAGCCGTTAAGAATATTCTAAAATATCTTAGAAGAACAAAAGACTACATGCTTGTGTATAGTTCTAAGGATATGATCCTTACTGGATACACTGACTCCGATTTTCAAACTGATAAAGATGCTAGAAATTCTACATCAGGATCAGTTTTCACTTTGAATGAAGGAGCAGTAGTTTGGAGAAGCATAAAATAA

Protein sequence

MSQTSYIDKMLSRYKMRNSKMGLLSNIYEIHLLKEQCPRTPQEVEDMSNIPYASTVGSLMYAMLCTSPDICYSVWIISRYQPNPGRDHWTAVKNILKYLRRTKDYMLVYSSKDMILTGYTDSDFQTDKDARNSTSGSVFTLNEGAVVWRSIK
Homology
BLAST of Cmc10g0281251 vs. NCBI nr
Match: TYK11050.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 270.4 bits (690), Expect = 9.5e-69
Identity = 131/152 (86.18%), Postives = 139/152 (91.45%), Query Frame = 0

Query: 1   MSQTSYIDKMLSRYKMRNSKMGLLSNIYEIHLLKEQCPRTPQEVEDMSNIPYASTVGSLM 60
           MSQTSYIDKMLSRYKM+NSK GLL   Y IHL KEQCP+TPQEVEDMSNIPYAS +GSLM
Sbjct: 122 MSQTSYIDKMLSRYKMQNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASAIGSLM 181

Query: 61  YAMLCTSPDICYSVWIISRYQPNPGRDHWTAVKNILKYLRRTKDYMLVYSSKDMILTGYT 120
           YAMLCT  DICYSV I++RYQ NPGRDHWTAVKNILKYLRRTKDYMLVY SKD+ILTGYT
Sbjct: 182 YAMLCTRVDICYSVGIVNRYQSNPGRDHWTAVKNILKYLRRTKDYMLVYGSKDLILTGYT 241

Query: 121 DSDFQTDKDARNSTSGSVFTLNEGAVVWRSIK 153
           DSDFQTDKDAR STSGS+FTLNEGAVVW+SIK
Sbjct: 242 DSDFQTDKDARKSTSGSIFTLNEGAVVWKSIK 273

BLAST of Cmc10g0281251 vs. NCBI nr
Match: KAA0026227.1 (gag/pol protein [Cucumis melo var. makuwa] >TYK30725.1 gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 270.0 bits (689), Expect = 1.2e-68
Identity = 133/152 (87.50%), Postives = 139/152 (91.45%), Query Frame = 0

Query: 1   MSQTSYIDKMLSRYKMRNSKMGLLSNIYEIHLLKEQCPRTPQEVEDMSNIPYASTVGSLM 60
           MSQTSYIDKMLSRYKM+NSK  LLS+ Y IHL KEQCP+TPQEVEDMSNIPYAS VGSLM
Sbjct: 1   MSQTSYIDKMLSRYKMQNSKKDLLSDRYGIHLSKEQCPKTPQEVEDMSNIPYASAVGSLM 60

Query: 61  YAMLCTSPDICYSVWIISRYQPNPGRDHWTAVKNILKYLRRTKDYMLVYSSKDMILTGYT 120
           YAMLCT PDICYSV I+SRYQ NPGRDHWTAVKNILKYLRRTKDYMLVY SKD+ILT YT
Sbjct: 61  YAMLCTRPDICYSVGIVSRYQSNPGRDHWTAVKNILKYLRRTKDYMLVYGSKDLILTRYT 120

Query: 121 DSDFQTDKDARNSTSGSVFTLNEGAVVWRSIK 153
           + DFQTDKDAR STSGSVFTLNEGAVVWRSIK
Sbjct: 121 NFDFQTDKDARKSTSGSVFTLNEGAVVWRSIK 152

BLAST of Cmc10g0281251 vs. NCBI nr
Match: KAA0050132.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 262.3 bits (669), Expect = 2.6e-66
Identity = 129/152 (84.87%), Postives = 135/152 (88.82%), Query Frame = 0

Query: 1   MSQTSYIDKMLSRYKMRNSKMGLLSNIYEIHLLKEQCPRTPQEVEDMSNIPYASTVGSLM 60
           MSQTSY+DKMLSRYKM+N K  LLS  Y IHL KEQCP+TPQEVEDMSNI YA  VGSLM
Sbjct: 73  MSQTSYMDKMLSRYKMQNFKKALLSYRYGIHLSKEQCPKTPQEVEDMSNISYAYAVGSLM 132

Query: 61  YAMLCTSPDICYSVWIISRYQPNPGRDHWTAVKNILKYLRRTKDYMLVYSSKDMILTGYT 120
           YAMLCT PDICYSV I+SRYQ NPGRDHWTA+KNILKYLRRTKDYMLVY SKD+IL GYT
Sbjct: 133 YAMLCTRPDICYSVGIVSRYQSNPGRDHWTAIKNILKYLRRTKDYMLVYGSKDLILIGYT 192

Query: 121 DSDFQTDKDARNSTSGSVFTLNEGAVVWRSIK 153
           DSDFQTDKDAR STSGSVFTLN GAVVWRSIK
Sbjct: 193 DSDFQTDKDARKSTSGSVFTLNGGAVVWRSIK 224

BLAST of Cmc10g0281251 vs. NCBI nr
Match: KAA0063746.1 (gag/pol protein [Cucumis melo var. makuwa] >TYK14949.1 gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 261.9 bits (668), Expect = 3.4e-66
Identity = 129/152 (84.87%), Postives = 135/152 (88.82%), Query Frame = 0

Query: 1   MSQTSYIDKMLSRYKMRNSKMGLLSNIYEIHLLKEQCPRTPQEVEDMSNIPYASTVGSLM 60
           MSQTSYIDKMLSRYKM+NSK  +L   Y IHL KEQCP+TPQEVEDMSNI Y S VGSLM
Sbjct: 71  MSQTSYIDKMLSRYKMQNSKKDMLPYRYGIHLSKEQCPKTPQEVEDMSNILYVSVVGSLM 130

Query: 61  YAMLCTSPDICYSVWIISRYQPNPGRDHWTAVKNILKYLRRTKDYMLVYSSKDMILTGYT 120
           YA+LCT PDICYSV I+SRYQ NPGRDHWTAVKNILKYLRR KDYMLVY SKD+ILTGYT
Sbjct: 131 YALLCTRPDICYSVGIVSRYQSNPGRDHWTAVKNILKYLRRIKDYMLVYGSKDLILTGYT 190

Query: 121 DSDFQTDKDARNSTSGSVFTLNEGAVVWRSIK 153
           DSDFQTDKDAR STSGSVFTLN GAVVWRSIK
Sbjct: 191 DSDFQTDKDARKSTSGSVFTLNGGAVVWRSIK 222

BLAST of Cmc10g0281251 vs. NCBI nr
Match: KAA0046768.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 260.0 bits (663), Expect = 1.3e-65
Identity = 129/152 (84.87%), Postives = 134/152 (88.16%), Query Frame = 0

Query: 1   MSQTSYIDKMLSRYKMRNSKMGLLSNIYEIHLLKEQCPRTPQEVEDMSNIPYASTVGSLM 60
           MSQTSYIDKMLSRYKM+NSK GLL   Y I L KEQCP+TPQEVEDMSNIPYAS +GSLM
Sbjct: 327 MSQTSYIDKMLSRYKMQNSKKGLLPYRYGIDLSKEQCPKTPQEVEDMSNIPYASAIGSLM 386

Query: 61  YAMLCTSPDICYSVWIISRYQPNPGRDHWTAVKNILKYLRRTKDYMLVYSSKDMILTGYT 120
           YAMLCT PDICYSV I+SRYQ NP RDHWTAVKNILKY RRTKDYMLVY SKD+ILTGYT
Sbjct: 387 YAMLCTRPDICYSVGIVSRYQSNPRRDHWTAVKNILKYHRRTKDYMLVYGSKDLILTGYT 446

Query: 121 DSDFQTDKDARNSTSGSVFTLNEGAVVWRSIK 153
           DSDFQTDKDAR ST GSVFTLN  AVVWRSIK
Sbjct: 447 DSDFQTDKDARKSTLGSVFTLNGAAVVWRSIK 478

BLAST of Cmc10g0281251 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 7.9e-34
Identity = 69/150 (46.00%), Postives = 100/150 (66.67%), Query Frame = 0

Query: 1    MSQTSYIDKMLSRYKMRNSKMGLLSNIYEIHLLKEQCPRTPQEVEDMSNIPYASTVGSLM 60
            +SQ  YI+++L R+ M+N+K         + L K+ CP T +E  +M+ +PY+S VGSLM
Sbjct: 1060 LSQEKYIERVLERFNMKNAKPVSTPLAGHLKLSKKMCPTTVEEKGNMAKVPYSSAVGSLM 1119

Query: 61   YAMLCTSPDICYSVWIISRYQPNPGRDHWTAVKNILKYLRRTKDYMLVYSSKDMILTGYT 120
            YAM+CT PDI ++V ++SR+  NPG++HW AVK IL+YLR T    L +   D IL GYT
Sbjct: 1120 YAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCFGGSDPILKGYT 1179

Query: 121  DSDFQTDKDARNSTSGSVFTLNEGAVVWRS 151
            D+D   D D R S++G +FT + GA+ W+S
Sbjct: 1180 DADMAGDIDNRKSSTGYLFTFSGGAISWQS 1209

BLAST of Cmc10g0281251 vs. ExPASy Swiss-Prot
Match: P0CV72 (Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 PE=2 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 1.9e-19
Identity = 46/107 (42.99%), Postives = 70/107 (65.42%), Query Frame = 0

Query: 47  MSNIPYASTVGSLMYAMLCTSPDICYSVWIISRYQPNPGRDHWTAVKNILKYLRRTKDYM 106
           M N+PY S VG++MY M+ T PD+  +V ++S++  +P   HW A+K +L+YL+ T+ Y 
Sbjct: 1   MKNVPYLSAVGAIMYLMVVTRPDLAAAVGVLSQFASDPCPTHWQALKRVLRYLQSTQTYG 60

Query: 107 LVYSSKDMI-LTGYTDSDFQTDKDARNSTSGSVFTLNEGAVVWRSIK 153
           L ++      L GY+D+D+  D ++R STSG +F LN G V WRS K
Sbjct: 61  LEFTRAGTAKLVGYSDADWAGDVESRRSTSGYLFKLNGGCVSWRSKK 107

BLAST of Cmc10g0281251 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 79.3 bits (194), Expect = 4.1e-14
Identity = 51/148 (34.46%), Postives = 77/148 (52.03%), Query Frame = 0

Query: 1    MSQTSYIDKMLSRYKMRNS---KMGLLSNI-YEIHLLKEQCPRTPQEVEDMSNIPYASTV 60
            +SQ++Y+ K+LS++ M N       L S I YE+    E C           N P  S +
Sbjct: 1137 LSQSAYVKKILSKFNMENCNAVSTPLPSKINYELLNSDEDC-----------NTPCRSLI 1196

Query: 61   GSLMYAMLCTSPDICYSVWIISRYQPNPGRDHWTAVKNILKYLRRTKDYMLVYSSK---D 120
            G LMY MLCT PD+  +V I+SRY      + W  +K +L+YL+ T D  L++      +
Sbjct: 1197 GCLMYIMLCTRPDLTTAVNILSRYSSKNNSELWQNLKRVLRYLKGTIDMKLIFKKNLAFE 1256

Query: 121  MILTGYTDSDFQTDKDARNSTSGSVFTL 142
              + GY DSD+   +  R ST+G +F +
Sbjct: 1257 NKIIGYVDSDWAGSEIDRKSTTGYLFKM 1273

BLAST of Cmc10g0281251 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 2.7e-10
Identity = 47/153 (30.72%), Postives = 70/153 (45.75%), Query Frame = 0

Query: 1    MSQTSYIDKMLSRYKMRNSKMGLLSNIYEIHLLKEQCPRTPQEVEDMSNIPYASTVGSLM 60
            +SQ  Y   +L+R  M  +K           L      + P   E      Y   VGSL 
Sbjct: 1183 LSQRRYTLDLLARTNMLTAKPVATPMATSPKLTLHSGTKLPDPTE------YRGIVGSLQ 1242

Query: 61   YAMLCTSPDICYSVWIISRYQPNPGRDHWTAVKNILKYLRRTKDY-MLVYSSKDMILTGY 120
            Y +  T PD+ Y+V  +S+Y   P  DHW A+K +L+YL  T D+ + +     + L  Y
Sbjct: 1243 Y-LAFTRPDLSYAVNRLSQYMHMPTDDHWNALKRVLRYLAGTPDHGIFLKKGNTLSLHAY 1302

Query: 121  TDSDFQTDKDARNSTSGSVFTLNEGAVVWRSIK 153
            +D+D+  D D   ST+G +  L    + W S K
Sbjct: 1303 SDADWAGDTDDYVSTNGYIVYLGHHPISWSSKK 1328

BLAST of Cmc10g0281251 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 2.5e-08
Identity = 36/102 (35.29%), Postives = 55/102 (53.92%), Query Frame = 0

Query: 52   YASTVGSLMYAMLCTSPDICYSVWIISRYQPNPGRDHWTAVKNILKYLRRTKDY-MLVYS 111
            Y   VGSL Y +  T PDI Y+V  +S++   P  +H  A+K IL+YL  T ++ + +  
Sbjct: 1245 YRGIVGSLQY-LAFTRPDISYAVNRLSQFMHMPTEEHLQALKRILRYLAGTPNHGIFLKK 1304

Query: 112  SKDMILTGYTDSDFQTDKDARNSTSGSVFTLNEGAVVWRSIK 153
               + L  Y+D+D+  DKD   ST+G +  L    + W S K
Sbjct: 1305 GNTLSLHAYSDADWAGDKDDYVSTNGYIVYLGHHPISWSSKK 1345

BLAST of Cmc10g0281251 vs. ExPASy TrEMBL
Match: A0A5D3CI71 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold73G00330 PE=4 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 4.6e-69
Identity = 131/152 (86.18%), Postives = 139/152 (91.45%), Query Frame = 0

Query: 1   MSQTSYIDKMLSRYKMRNSKMGLLSNIYEIHLLKEQCPRTPQEVEDMSNIPYASTVGSLM 60
           MSQTSYIDKMLSRYKM+NSK GLL   Y IHL KEQCP+TPQEVEDMSNIPYAS +GSLM
Sbjct: 122 MSQTSYIDKMLSRYKMQNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASAIGSLM 181

Query: 61  YAMLCTSPDICYSVWIISRYQPNPGRDHWTAVKNILKYLRRTKDYMLVYSSKDMILTGYT 120
           YAMLCT  DICYSV I++RYQ NPGRDHWTAVKNILKYLRRTKDYMLVY SKD+ILTGYT
Sbjct: 182 YAMLCTRVDICYSVGIVNRYQSNPGRDHWTAVKNILKYLRRTKDYMLVYGSKDLILTGYT 241

Query: 121 DSDFQTDKDARNSTSGSVFTLNEGAVVWRSIK 153
           DSDFQTDKDAR STSGS+FTLNEGAVVW+SIK
Sbjct: 242 DSDFQTDKDARKSTSGSIFTLNEGAVVWKSIK 273

BLAST of Cmc10g0281251 vs. ExPASy TrEMBL
Match: A0A5A7SNE2 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold343G00570 PE=4 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 6.0e-69
Identity = 133/152 (87.50%), Postives = 139/152 (91.45%), Query Frame = 0

Query: 1   MSQTSYIDKMLSRYKMRNSKMGLLSNIYEIHLLKEQCPRTPQEVEDMSNIPYASTVGSLM 60
           MSQTSYIDKMLSRYKM+NSK  LLS+ Y IHL KEQCP+TPQEVEDMSNIPYAS VGSLM
Sbjct: 1   MSQTSYIDKMLSRYKMQNSKKDLLSDRYGIHLSKEQCPKTPQEVEDMSNIPYASAVGSLM 60

Query: 61  YAMLCTSPDICYSVWIISRYQPNPGRDHWTAVKNILKYLRRTKDYMLVYSSKDMILTGYT 120
           YAMLCT PDICYSV I+SRYQ NPGRDHWTAVKNILKYLRRTKDYMLVY SKD+ILT YT
Sbjct: 61  YAMLCTRPDICYSVGIVSRYQSNPGRDHWTAVKNILKYLRRTKDYMLVYGSKDLILTRYT 120

Query: 121 DSDFQTDKDARNSTSGSVFTLNEGAVVWRSIK 153
           + DFQTDKDAR STSGSVFTLNEGAVVWRSIK
Sbjct: 121 NFDFQTDKDARKSTSGSVFTLNEGAVVWRSIK 152

BLAST of Cmc10g0281251 vs. ExPASy TrEMBL
Match: A0A5A7U2R8 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G001560 PE=4 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 1.2e-66
Identity = 129/152 (84.87%), Postives = 135/152 (88.82%), Query Frame = 0

Query: 1   MSQTSYIDKMLSRYKMRNSKMGLLSNIYEIHLLKEQCPRTPQEVEDMSNIPYASTVGSLM 60
           MSQTSY+DKMLSRYKM+N K  LLS  Y IHL KEQCP+TPQEVEDMSNI YA  VGSLM
Sbjct: 73  MSQTSYMDKMLSRYKMQNFKKALLSYRYGIHLSKEQCPKTPQEVEDMSNISYAYAVGSLM 132

Query: 61  YAMLCTSPDICYSVWIISRYQPNPGRDHWTAVKNILKYLRRTKDYMLVYSSKDMILTGYT 120
           YAMLCT PDICYSV I+SRYQ NPGRDHWTA+KNILKYLRRTKDYMLVY SKD+IL GYT
Sbjct: 133 YAMLCTRPDICYSVGIVSRYQSNPGRDHWTAIKNILKYLRRTKDYMLVYGSKDLILIGYT 192

Query: 121 DSDFQTDKDARNSTSGSVFTLNEGAVVWRSIK 153
           DSDFQTDKDAR STSGSVFTLN GAVVWRSIK
Sbjct: 193 DSDFQTDKDARKSTSGSVFTLNGGAVVWRSIK 224

BLAST of Cmc10g0281251 vs. ExPASy TrEMBL
Match: A0A5A7VBE3 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold437G00140 PE=4 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 1.6e-66
Identity = 129/152 (84.87%), Postives = 135/152 (88.82%), Query Frame = 0

Query: 1   MSQTSYIDKMLSRYKMRNSKMGLLSNIYEIHLLKEQCPRTPQEVEDMSNIPYASTVGSLM 60
           MSQTSYIDKMLSRYKM+NSK  +L   Y IHL KEQCP+TPQEVEDMSNI Y S VGSLM
Sbjct: 71  MSQTSYIDKMLSRYKMQNSKKDMLPYRYGIHLSKEQCPKTPQEVEDMSNILYVSVVGSLM 130

Query: 61  YAMLCTSPDICYSVWIISRYQPNPGRDHWTAVKNILKYLRRTKDYMLVYSSKDMILTGYT 120
           YA+LCT PDICYSV I+SRYQ NPGRDHWTAVKNILKYLRR KDYMLVY SKD+ILTGYT
Sbjct: 131 YALLCTRPDICYSVGIVSRYQSNPGRDHWTAVKNILKYLRRIKDYMLVYGSKDLILTGYT 190

Query: 121 DSDFQTDKDARNSTSGSVFTLNEGAVVWRSIK 153
           DSDFQTDKDAR STSGSVFTLN GAVVWRSIK
Sbjct: 191 DSDFQTDKDARKSTSGSVFTLNGGAVVWRSIK 222

BLAST of Cmc10g0281251 vs. ExPASy TrEMBL
Match: A0A5A7TV73 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold216G00520 PE=4 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 6.2e-66
Identity = 129/152 (84.87%), Postives = 134/152 (88.16%), Query Frame = 0

Query: 1   MSQTSYIDKMLSRYKMRNSKMGLLSNIYEIHLLKEQCPRTPQEVEDMSNIPYASTVGSLM 60
           MSQTSYIDKMLSRYKM+NSK GLL   Y I L KEQCP+TPQEVEDMSNIPYAS +GSLM
Sbjct: 327 MSQTSYIDKMLSRYKMQNSKKGLLPYRYGIDLSKEQCPKTPQEVEDMSNIPYASAIGSLM 386

Query: 61  YAMLCTSPDICYSVWIISRYQPNPGRDHWTAVKNILKYLRRTKDYMLVYSSKDMILTGYT 120
           YAMLCT PDICYSV I+SRYQ NP RDHWTAVKNILKY RRTKDYMLVY SKD+ILTGYT
Sbjct: 387 YAMLCTRPDICYSVGIVSRYQSNPRRDHWTAVKNILKYHRRTKDYMLVYGSKDLILTGYT 446

Query: 121 DSDFQTDKDARNSTSGSVFTLNEGAVVWRSIK 153
           DSDFQTDKDAR ST GSVFTLN  AVVWRSIK
Sbjct: 447 DSDFQTDKDARKSTLGSVFTLNGAAVVWRSIK 478

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
TYK11050.19.5e-6986.18gag/pol protein [Cucumis melo var. makuwa][more]
KAA0026227.11.2e-6887.50gag/pol protein [Cucumis melo var. makuwa] >TYK30725.1 gag/pol protein [Cucumis ... [more]
KAA0050132.12.6e-6684.87gag/pol protein [Cucumis melo var. makuwa][more]
KAA0063746.13.4e-6684.87gag/pol protein [Cucumis melo var. makuwa] >TYK14949.1 gag/pol protein [Cucumis ... [more]
KAA0046768.11.3e-6584.87gag/pol protein [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
P109787.9e-3446.00Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... [more]
P0CV721.9e-1942.99Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 P... [more]
P041464.1e-1434.46Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3[more]
Q9ZT942.7e-1030.72Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... [more]
Q94HW22.5e-0835.29Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... [more]
Match NameE-valueIdentityDescription
A0A5D3CI714.6e-6986.18Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold73G00330... [more]
A0A5A7SNE26.0e-6987.50Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold343G0057... [more]
A0A5A7U2R81.2e-6684.87Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G0015... [more]
A0A5A7VBE31.6e-6684.87Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold437G0014... [more]
A0A5A7TV736.2e-6684.87Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold216G0052... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11439:SF308SUBFAMILY NOT NAMEDcoord: 39..137
NoneNo IPR availablePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 39..137

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc10g0281251.1Cmc10g0281251.1mRNA