Cmc10g0281111 (gene) Melon (Charmono) v1.1

Overview
NameCmc10g0281111
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionTy3/gypsy retrotransposon protein
LocationCMiso1.1chr10: 19287249 .. 19287899 (+)
RNA-Seq ExpressionCmc10g0281111
SyntenyCmc10g0281111
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATTGGAAGGTGAAGGAAGAATTTCTACCGCTGGAACTCGGAGGGGTTGATGTTGTGTTAGGTATGCAATGGCTTCATTCACTGGGAGTAACAGTAGTTGATTGGAAAAACCTTACACTTACGTTTTCTAGTGAAGGAAAACAAATTTCGATAAAAGGGGATCCTAGCCTTACTAAATCACGAATCAGTCTCAAGAGTATGTTTAAGACTTGGCTTGATCAAGATGAAGGATTTTTGATCGATTGTAGAGCAATACAAGTTCGTGAAGAGAATGAGCAGACTAATACAGCAACTGTTATCCATGAAGCTGAACCCCTACAAAACATGTTGAAACAATTCGGAGATGTTTTTGACTGGCCTGAAAAGCTTCCACCAAGAAGAAAAATTGAACATCAAATACATCTCAAAGAAGGGACTAACCCAATAAACGTTAGACCTTATAAATATGGGTTTCAACAAAAAGCAGAAATGGAAAAACTGGTGGAGGAAATGCTAACTTCAGGGATTATTAGGCCAAGTAATAGCCCCTTTTCAAGCCCGGTACTGCTAGTTAAAAAGAAAGATGGCAGCTGGCGTTTTTGTGTCGATTACCGTGCAGTAAACACTGCTACAATTCCGGATAAATTTTCAATACCAGTGGTTGAATAA

mRNA sequence

ATGAATTGGAAGGTGAAGGAAGAATTTCTACCGCTGGAACTCGGAGGGGTTGATGTTGTGTTAGGTATGCAATGGCTTCATTCACTGGGAGTAACAGTAGTTGATTGGAAAAACCTTACACTTACGTTTTCTAGTGAAGGAAAACAAATTTCGATAAAAGGGGATCCTAGCCTTACTAAATCACGAATCAGTCTCAAGAGTATGTTTAAGACTTGGCTTGATCAAGATGAAGGATTTTTGATCGATTGTAGAGCAATACAAGTTCGTGAAGAGAATGAGCAGACTAATACAGCAACTGTTATCCATGAAGCTGAACCCCTACAAAACATGTTGAAACAATTCGGAGATGTTTTTGACTGGCCTGAAAAGCTTCCACCAAGAAGAAAAATTGAACATCAAATACATCTCAAAGAAGGGACTAACCCAATAAACGTTAGACCTTATAAATATGGGTTTCAACAAAAAGCAGAAATGGAAAAACTGGTGGAGGAAATGCTAACTTCAGGGATTATTAGGCCAAGTAATAGCCCCTTTTCAAGCCCGGTACTGCTAGTTAAAAAGAAAGATGGCAGCTGGCGTTTTTGTGTCGATTACCGTGCAGTAAACACTGCTACAATTCCGGATAAATTTTCAATACCAGTGGTTGAATAA

Coding sequence (CDS)

ATGAATTGGAAGGTGAAGGAAGAATTTCTACCGCTGGAACTCGGAGGGGTTGATGTTGTGTTAGGTATGCAATGGCTTCATTCACTGGGAGTAACAGTAGTTGATTGGAAAAACCTTACACTTACGTTTTCTAGTGAAGGAAAACAAATTTCGATAAAAGGGGATCCTAGCCTTACTAAATCACGAATCAGTCTCAAGAGTATGTTTAAGACTTGGCTTGATCAAGATGAAGGATTTTTGATCGATTGTAGAGCAATACAAGTTCGTGAAGAGAATGAGCAGACTAATACAGCAACTGTTATCCATGAAGCTGAACCCCTACAAAACATGTTGAAACAATTCGGAGATGTTTTTGACTGGCCTGAAAAGCTTCCACCAAGAAGAAAAATTGAACATCAAATACATCTCAAAGAAGGGACTAACCCAATAAACGTTAGACCTTATAAATATGGGTTTCAACAAAAAGCAGAAATGGAAAAACTGGTGGAGGAAATGCTAACTTCAGGGATTATTAGGCCAAGTAATAGCCCCTTTTCAAGCCCGGTACTGCTAGTTAAAAAGAAAGATGGCAGCTGGCGTTTTTGTGTCGATTACCGTGCAGTAAACACTGCTACAATTCCGGATAAATTTTCAATACCAGTGGTTGAATAA

Protein sequence

MNWKVKEEFLPLELGGVDVVLGMQWLHSLGVTVVDWKNLTLTFSSEGKQISIKGDPSLTKSRISLKSMFKTWLDQDEGFLIDCRAIQVREENEQTNTATVIHEAEPLQNMLKQFGDVFDWPEKLPPRRKIEHQIHLKEGTNPINVRPYKYGFQQKAEMEKLVEEMLTSGIIRPSNSPFSSPVLLVKKKDGSWRFCVDYRAVNTATIPDKFSIPVVE
Homology
BLAST of Cmc10g0281111 vs. NCBI nr
Match: KAA0056478.1 (transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa] >TYK29049.1 transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 446.0 bits (1146), Expect = 1.8e-121
Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 0

Query: 1   MNWKVKEEFLPLELGGVDVVLGMQWLHSLGVTVVDWKNLTLTFSSEGKQISIKGDPSLTK 60
           MNWKVKEEFLPLELGGVDVVLGMQWLHSLGVTVVDWKNLTLTFSSEGKQISIKGDPSLTK
Sbjct: 406 MNWKVKEEFLPLELGGVDVVLGMQWLHSLGVTVVDWKNLTLTFSSEGKQISIKGDPSLTK 465

Query: 61  SRISLKSMFKTWLDQDEGFLIDCRAIQVREENEQTNTATVIHEAEPLQNMLKQFGDVFDW 120
           SRISLKSMFKTWLDQDEGFLIDCRAIQVREENEQTNTATVIHEAEPLQNMLKQFGDVFDW
Sbjct: 466 SRISLKSMFKTWLDQDEGFLIDCRAIQVREENEQTNTATVIHEAEPLQNMLKQFGDVFDW 525

Query: 121 PEKLPPRRKIEHQIHLKEGTNPINVRPYKYGFQQKAEMEKLVEEMLTSGIIRPSNSPFSS 180
           PEKLPPRRKIEHQIHLKEGTNPINVRPYKYGFQQKAEMEKLVEEMLTSGIIRPSNSPFSS
Sbjct: 526 PEKLPPRRKIEHQIHLKEGTNPINVRPYKYGFQQKAEMEKLVEEMLTSGIIRPSNSPFSS 585

Query: 181 PVLLVKKKDGSWRFCVDYRAVNTATIPDKFSIPVVE 217
           PVLLVKKKDGSWRFCVDYRAVNTATIPDKFSIPVVE
Sbjct: 586 PVLLVKKKDGSWRFCVDYRAVNTATIPDKFSIPVVE 621

BLAST of Cmc10g0281111 vs. NCBI nr
Match: TYK14861.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 399.4 bits (1025), Expect = 1.9e-107
Identity = 192/201 (95.52%), Postives = 197/201 (98.01%), Query Frame = 0

Query: 16  GVDVVLGMQWLHSLGVTVVDWKNLTLTFSSEGKQISIKGDPSLTKSRISLKSMFKTWLDQ 75
           GVDVVLGMQWLHSLGVTVVDWKNLTLTFSSEGKQISIKGDPSLTKSRISLKSMFKTWLDQ
Sbjct: 403 GVDVVLGMQWLHSLGVTVVDWKNLTLTFSSEGKQISIKGDPSLTKSRISLKSMFKTWLDQ 462

Query: 76  DEGFLIDCRAIQVREENEQTNTATVIHEAEPLQNMLKQFGDVFDWPEKLPPRRKIEHQIH 135
           DEGFLI+CRAIQV EENEQTNT T+IHEAEPLQNMLKQFGDVFDWPEKLPPRRKIEHQIH
Sbjct: 463 DEGFLIECRAIQVCEENEQTNTTTIIHEAEPLQNMLKQFGDVFDWPEKLPPRRKIEHQIH 522

Query: 136 LKEGTNPINVRPYKYGFQQKAEMEKLVEEMLTSGIIRPSNSPFSSPVLLVKKKDGSWRFC 195
           LKEGTNPINVRPY+YGFQQKA+MEKLVEEMLTSGIIRPSNSPFSSPVLLVKK+DGSWRFC
Sbjct: 523 LKEGTNPINVRPYRYGFQQKAKMEKLVEEMLTSGIIRPSNSPFSSPVLLVKKRDGSWRFC 582

Query: 196 VDYRAVNTATIPDKFSIPVVE 217
           VDYRAVN ATIPDKF IPVVE
Sbjct: 583 VDYRAVNNATIPDKFPIPVVE 603

BLAST of Cmc10g0281111 vs. NCBI nr
Match: TYK02195.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 396.4 bits (1017), Expect = 1.6e-106
Identity = 189/215 (87.91%), Postives = 200/215 (93.02%), Query Frame = 0

Query: 2   NWKVKEEFLPLELGGVDVVLGMQWLHSLGVTVVDWKNLTLTFSSEGKQISIKGDPSLTKS 61
           NWKVKEEFLPLELGGVDVVLGMQWLHSLG+TVVDWKNLTLTFSSEGKQISIKGDPSLTKS
Sbjct: 498 NWKVKEEFLPLELGGVDVVLGMQWLHSLGITVVDWKNLTLTFSSEGKQISIKGDPSLTKS 557

Query: 62  RISLKSMFKTWLDQDEGFLIDCRAIQVREENEQTNTATVIHEAEPLQNMLKQFGDVFDWP 121
           RISLKSM KTW++QDEGFLI+CRA+QV  ENEQ++TA      EPLQN+LKQF DVFDWP
Sbjct: 558 RISLKSMIKTWVEQDEGFLIECRAVQVHTENEQSSTAVTTIGDEPLQNVLKQFEDVFDWP 617

Query: 122 EKLPPRRKIEHQIHLKEGTNPINVRPYKYGFQQKAEMEKLVEEMLTSGIIRPSNSPFSSP 181
           E+LPPRR IEHQIHLKEGTNPINVRPY+YGFQQKAEME+LVEEML SGIIRPSNSPFSSP
Sbjct: 618 ERLPPRRGIEHQIHLKEGTNPINVRPYRYGFQQKAEMERLVEEMLASGIIRPSNSPFSSP 677

Query: 182 VLLVKKKDGSWRFCVDYRAVNTATIPDKFSIPVVE 217
           VLLVKKKDGSWRFCVDYRAVN ATIPDKF IPV E
Sbjct: 678 VLLVKKKDGSWRFCVDYRAVNNATIPDKFPIPVAE 712

BLAST of Cmc10g0281111 vs. NCBI nr
Match: TYK06549.1 (transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 396.4 bits (1017), Expect = 1.6e-106
Identity = 189/215 (87.91%), Postives = 200/215 (93.02%), Query Frame = 0

Query: 2   NWKVKEEFLPLELGGVDVVLGMQWLHSLGVTVVDWKNLTLTFSSEGKQISIKGDPSLTKS 61
           NWKVKEEFLPLELGGVDVVLGMQWLHSLG+TVVDWKNLTLTFSSEGKQISIKGDPSLTKS
Sbjct: 403 NWKVKEEFLPLELGGVDVVLGMQWLHSLGITVVDWKNLTLTFSSEGKQISIKGDPSLTKS 462

Query: 62  RISLKSMFKTWLDQDEGFLIDCRAIQVREENEQTNTATVIHEAEPLQNMLKQFGDVFDWP 121
           RISLKSM KTW++QDEGFLI+CRA+QV  ENEQ++TA      EPLQN+LKQF DVFDWP
Sbjct: 463 RISLKSMIKTWVEQDEGFLIECRAVQVHTENEQSSTAATTIGDEPLQNVLKQFEDVFDWP 522

Query: 122 EKLPPRRKIEHQIHLKEGTNPINVRPYKYGFQQKAEMEKLVEEMLTSGIIRPSNSPFSSP 181
           E+LPPRR IEHQIHLKEGTNPINVRPY+YGFQQKAEME+LVEEML SGIIRPSNSPFSSP
Sbjct: 523 ERLPPRRGIEHQIHLKEGTNPINVRPYRYGFQQKAEMERLVEEMLASGIIRPSNSPFSSP 582

Query: 182 VLLVKKKDGSWRFCVDYRAVNTATIPDKFSIPVVE 217
           VLLVKKKDGSWRFCVDYRAVN ATIPDKF IPV E
Sbjct: 583 VLLVKKKDGSWRFCVDYRAVNNATIPDKFPIPVAE 617

BLAST of Cmc10g0281111 vs. NCBI nr
Match: TYK22515.1 (transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 394.8 bits (1013), Expect = 4.7e-106
Identity = 188/215 (87.44%), Postives = 199/215 (92.56%), Query Frame = 0

Query: 2   NWKVKEEFLPLELGGVDVVLGMQWLHSLGVTVVDWKNLTLTFSSEGKQISIKGDPSLTKS 61
           NWKVKEEFLPLELGGVDVVLGMQWLHSLG+TVVDWKNLTLTF SEGKQISIKGDPSLTK 
Sbjct: 179 NWKVKEEFLPLELGGVDVVLGMQWLHSLGITVVDWKNLTLTFYSEGKQISIKGDPSLTKL 238

Query: 62  RISLKSMFKTWLDQDEGFLIDCRAIQVREENEQTNTATVIHEAEPLQNMLKQFGDVFDWP 121
           RISLKSM KTW++QDEGFLI+CRA+QV +ENE+ NTAT   E EPLQNMLKQF D+FDWP
Sbjct: 239 RISLKSMIKTWVEQDEGFLIECRAVQVHKENERINTATTTSEDEPLQNMLKQFEDIFDWP 298

Query: 122 EKLPPRRKIEHQIHLKEGTNPINVRPYKYGFQQKAEMEKLVEEMLTSGIIRPSNSPFSSP 181
           +KL PRR IEHQIHLKEGTNPINVRPY+YGFQQKAEME+LVEEMLTSGIIRPSNSPFSSP
Sbjct: 299 KKLSPRRGIEHQIHLKEGTNPINVRPYRYGFQQKAEMERLVEEMLTSGIIRPSNSPFSSP 358

Query: 182 VLLVKKKDGSWRFCVDYRAVNTATIPDKFSIPVVE 217
           VLLVKKKDGSWRFCVDYRAVN ATIPDK  IPV E
Sbjct: 359 VLLVKKKDGSWRFCVDYRAVNNATIPDKLPIPVAE 393

BLAST of Cmc10g0281111 vs. ExPASy Swiss-Prot
Match: Q99315 (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3)

HSP 1 Score: 86.3 bits (212), Expect = 4.7e-16
Identity = 42/99 (42.42%), Postives = 62/99 (62.63%), Query Frame = 0

Query: 124 LPPRR------KIEHQIHLKEGTNPINVRPYKYGFQQKAEMEKLVEEMLTSGIIRPSNSP 183
           LPPR        ++H I +K G     ++PY    + + E+ K+V+++L +  I PS SP
Sbjct: 572 LPPRPADINNIPVKHDIEIKPGARLPRLQPYHVTEKNEQEINKIVQKLLDNKFIVPSKSP 631

Query: 184 FSSPVLLVKKKDGSWRFCVDYRAVNTATIPDKFSIPVVE 217
            SSPV+LV KKDG++R CVDYR +N ATI D F +P ++
Sbjct: 632 CSSPVVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRID 670

BLAST of Cmc10g0281111 vs. ExPASy Swiss-Prot
Match: Q7LHG5 (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2)

HSP 1 Score: 86.3 bits (212), Expect = 4.7e-16
Identity = 42/99 (42.42%), Postives = 62/99 (62.63%), Query Frame = 0

Query: 124 LPPRR------KIEHQIHLKEGTNPINVRPYKYGFQQKAEMEKLVEEMLTSGIIRPSNSP 183
           LPPR        ++H I +K G     ++PY    + + E+ K+V+++L +  I PS SP
Sbjct: 598 LPPRPADINNIPVKHDIEIKPGARLPRLQPYHVTEKNEQEINKIVQKLLDNKFIVPSKSP 657

Query: 184 FSSPVLLVKKKDGSWRFCVDYRAVNTATIPDKFSIPVVE 217
            SSPV+LV KKDG++R CVDYR +N ATI D F +P ++
Sbjct: 658 CSSPVVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRID 696

BLAST of Cmc10g0281111 vs. ExPASy Swiss-Prot
Match: Q8I7P9 (Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 1.3e-13
Identity = 42/117 (35.90%), Postives = 67/117 (57.26%), Query Frame = 0

Query: 105 EPLQNMLKQFGDVFDWPEKLPPRRKIEHQIHLKEGTN---PINVRPYKYGFQQKAEMEKL 164
           E L ++L +F  +F+ P        +E  +  +  TN   PI  + Y Y    + E+E+ 
Sbjct: 86  EILNSLLGEFPRIFEPPLS---GMSVETAVKAEIRTNTQDPIYAKSYPYPVNMRGEVERQ 145

Query: 165 VEEMLTSGIIRPSNSPFSSPVLLVKKK-----DGSWRFCVDYRAVNTATIPDKFSIP 214
           ++E+L  GIIRPSNSP++SP+ +V KK     +  +R  VD++ +NT TIPD + IP
Sbjct: 146 IDELLQDGIIRPSNSPYNSPIWIVPKKPKPNGEKQYRMVVDFKRLNTVTIPDTYPIP 199

BLAST of Cmc10g0281111 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 2.1e-11
Identity = 58/207 (28.02%), Postives = 105/207 (50.72%), Query Frame = 0

Query: 18  DVVLGMQWLHSLGVTVVDWKNLTLT-FSSEGKQISIKGDPS----LTKSRISLKSMFKTW 77
           D+++G + L +   +V+++KN T+T F    K I+ + + +    + ++  S+ S     
Sbjct: 91  DMLIGRKLLKN-AQSVINYKNDTVTLFDQTYKLITSESERNQNLYIQRTPESIASS---- 150

Query: 78  LDQDEGFLIDCRAIQVREENEQTNTATVIHEAEPLQNMLKQFGDV-FDWPEKLPPRRKIE 137
            DQ+    +D    ++   N++        E   L+ +L +F ++ +   EKL     I+
Sbjct: 151 -DQESIKKLDFSQFRLDHLNQE--------ETFKLKGLLNKFRNLEYKEGEKLTFTNTIK 210

Query: 138 HQIHLKEGTNPINVRPYKYGFQQKAEMEKLVEEMLTSGIIRPSNSPFSSPVLLVKKKD-- 197
           H ++     +PI  + Y      + E+E  V+EML  G+IR SNSP++SP  +V KK   
Sbjct: 211 HVLNTTH-NSPIYSKQYPLAQTHEIEVENQVQEMLNQGLIRESNSPYNSPTWVVPKKPDA 270

Query: 198 ---GSWRFCVDYRAVNTATIPDKFSIP 214
                +R  +DYR +N  TIPD++ IP
Sbjct: 271 SGANKYRVVIDYRKLNEITIPDRYPIP 282

BLAST of Cmc10g0281111 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 8.6e-10
Identity = 39/117 (33.33%), Postives = 67/117 (57.26%), Query Frame = 0

Query: 103 EAEPLQNMLKQFGDV-FDWPEKLPPRRKIEHQIHLKEGTNPINVRPYKYGFQQKAEMEKL 162
           E + L  +L+++ D+ +   +KL    + +H I+ K      +   Y   ++Q  E+E  
Sbjct: 169 EKQRLCALLQKYHDIQYHEGDKLTFTNQTKHTINTKHNLPLYSKYSYPQAYEQ--EVESQ 228

Query: 163 VEEMLTSGIIRPSNSPFSSPVLLV-KKKDGS----WRFCVDYRAVNTATIPDKFSIP 214
           +++ML  GIIR SNSP++SP+ +V KK+D S    +R  +DYR +N  T+ D+  IP
Sbjct: 229 IQDMLNQGIIRTSNSPYNSPIWVVPKKQDASGKQKFRIVIDYRKLNEITVGDRHPIP 283

BLAST of Cmc10g0281111 vs. ExPASy TrEMBL
Match: A0A5A7UN05 (Transposon Tf2-1 polyprotein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold120G001670 PE=4 SV=1)

HSP 1 Score: 446.0 bits (1146), Expect = 8.7e-122
Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 0

Query: 1   MNWKVKEEFLPLELGGVDVVLGMQWLHSLGVTVVDWKNLTLTFSSEGKQISIKGDPSLTK 60
           MNWKVKEEFLPLELGGVDVVLGMQWLHSLGVTVVDWKNLTLTFSSEGKQISIKGDPSLTK
Sbjct: 406 MNWKVKEEFLPLELGGVDVVLGMQWLHSLGVTVVDWKNLTLTFSSEGKQISIKGDPSLTK 465

Query: 61  SRISLKSMFKTWLDQDEGFLIDCRAIQVREENEQTNTATVIHEAEPLQNMLKQFGDVFDW 120
           SRISLKSMFKTWLDQDEGFLIDCRAIQVREENEQTNTATVIHEAEPLQNMLKQFGDVFDW
Sbjct: 466 SRISLKSMFKTWLDQDEGFLIDCRAIQVREENEQTNTATVIHEAEPLQNMLKQFGDVFDW 525

Query: 121 PEKLPPRRKIEHQIHLKEGTNPINVRPYKYGFQQKAEMEKLVEEMLTSGIIRPSNSPFSS 180
           PEKLPPRRKIEHQIHLKEGTNPINVRPYKYGFQQKAEMEKLVEEMLTSGIIRPSNSPFSS
Sbjct: 526 PEKLPPRRKIEHQIHLKEGTNPINVRPYKYGFQQKAEMEKLVEEMLTSGIIRPSNSPFSS 585

Query: 181 PVLLVKKKDGSWRFCVDYRAVNTATIPDKFSIPVVE 217
           PVLLVKKKDGSWRFCVDYRAVNTATIPDKFSIPVVE
Sbjct: 586 PVLLVKKKDGSWRFCVDYRAVNTATIPDKFSIPVVE 621

BLAST of Cmc10g0281111 vs. ExPASy TrEMBL
Match: A0A5D3CSQ2 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold461G00320 PE=4 SV=1)

HSP 1 Score: 399.4 bits (1025), Expect = 9.3e-108
Identity = 192/201 (95.52%), Postives = 197/201 (98.01%), Query Frame = 0

Query: 16  GVDVVLGMQWLHSLGVTVVDWKNLTLTFSSEGKQISIKGDPSLTKSRISLKSMFKTWLDQ 75
           GVDVVLGMQWLHSLGVTVVDWKNLTLTFSSEGKQISIKGDPSLTKSRISLKSMFKTWLDQ
Sbjct: 403 GVDVVLGMQWLHSLGVTVVDWKNLTLTFSSEGKQISIKGDPSLTKSRISLKSMFKTWLDQ 462

Query: 76  DEGFLIDCRAIQVREENEQTNTATVIHEAEPLQNMLKQFGDVFDWPEKLPPRRKIEHQIH 135
           DEGFLI+CRAIQV EENEQTNT T+IHEAEPLQNMLKQFGDVFDWPEKLPPRRKIEHQIH
Sbjct: 463 DEGFLIECRAIQVCEENEQTNTTTIIHEAEPLQNMLKQFGDVFDWPEKLPPRRKIEHQIH 522

Query: 136 LKEGTNPINVRPYKYGFQQKAEMEKLVEEMLTSGIIRPSNSPFSSPVLLVKKKDGSWRFC 195
           LKEGTNPINVRPY+YGFQQKA+MEKLVEEMLTSGIIRPSNSPFSSPVLLVKK+DGSWRFC
Sbjct: 523 LKEGTNPINVRPYRYGFQQKAKMEKLVEEMLTSGIIRPSNSPFSSPVLLVKKRDGSWRFC 582

Query: 196 VDYRAVNTATIPDKFSIPVVE 217
           VDYRAVN ATIPDKF IPVVE
Sbjct: 583 VDYRAVNNATIPDKFPIPVVE 603

BLAST of Cmc10g0281111 vs. ExPASy TrEMBL
Match: A0A5D3BSP2 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold388G00980 PE=4 SV=1)

HSP 1 Score: 396.4 bits (1017), Expect = 7.9e-107
Identity = 189/215 (87.91%), Postives = 200/215 (93.02%), Query Frame = 0

Query: 2   NWKVKEEFLPLELGGVDVVLGMQWLHSLGVTVVDWKNLTLTFSSEGKQISIKGDPSLTKS 61
           NWKVKEEFLPLELGGVDVVLGMQWLHSLG+TVVDWKNLTLTFSSEGKQISIKGDPSLTKS
Sbjct: 498 NWKVKEEFLPLELGGVDVVLGMQWLHSLGITVVDWKNLTLTFSSEGKQISIKGDPSLTKS 557

Query: 62  RISLKSMFKTWLDQDEGFLIDCRAIQVREENEQTNTATVIHEAEPLQNMLKQFGDVFDWP 121
           RISLKSM KTW++QDEGFLI+CRA+QV  ENEQ++TA      EPLQN+LKQF DVFDWP
Sbjct: 558 RISLKSMIKTWVEQDEGFLIECRAVQVHTENEQSSTAVTTIGDEPLQNVLKQFEDVFDWP 617

Query: 122 EKLPPRRKIEHQIHLKEGTNPINVRPYKYGFQQKAEMEKLVEEMLTSGIIRPSNSPFSSP 181
           E+LPPRR IEHQIHLKEGTNPINVRPY+YGFQQKAEME+LVEEML SGIIRPSNSPFSSP
Sbjct: 618 ERLPPRRGIEHQIHLKEGTNPINVRPYRYGFQQKAEMERLVEEMLASGIIRPSNSPFSSP 677

Query: 182 VLLVKKKDGSWRFCVDYRAVNTATIPDKFSIPVVE 217
           VLLVKKKDGSWRFCVDYRAVN ATIPDKF IPV E
Sbjct: 678 VLLVKKKDGSWRFCVDYRAVNNATIPDKFPIPVAE 712

BLAST of Cmc10g0281111 vs. ExPASy TrEMBL
Match: A0A5D3C860 (Transposon Tf2-1 polyprotein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold453G00050 PE=4 SV=1)

HSP 1 Score: 396.4 bits (1017), Expect = 7.9e-107
Identity = 189/215 (87.91%), Postives = 200/215 (93.02%), Query Frame = 0

Query: 2   NWKVKEEFLPLELGGVDVVLGMQWLHSLGVTVVDWKNLTLTFSSEGKQISIKGDPSLTKS 61
           NWKVKEEFLPLELGGVDVVLGMQWLHSLG+TVVDWKNLTLTFSSEGKQISIKGDPSLTKS
Sbjct: 403 NWKVKEEFLPLELGGVDVVLGMQWLHSLGITVVDWKNLTLTFSSEGKQISIKGDPSLTKS 462

Query: 62  RISLKSMFKTWLDQDEGFLIDCRAIQVREENEQTNTATVIHEAEPLQNMLKQFGDVFDWP 121
           RISLKSM KTW++QDEGFLI+CRA+QV  ENEQ++TA      EPLQN+LKQF DVFDWP
Sbjct: 463 RISLKSMIKTWVEQDEGFLIECRAVQVHTENEQSSTAATTIGDEPLQNVLKQFEDVFDWP 522

Query: 122 EKLPPRRKIEHQIHLKEGTNPINVRPYKYGFQQKAEMEKLVEEMLTSGIIRPSNSPFSSP 181
           E+LPPRR IEHQIHLKEGTNPINVRPY+YGFQQKAEME+LVEEML SGIIRPSNSPFSSP
Sbjct: 523 ERLPPRRGIEHQIHLKEGTNPINVRPYRYGFQQKAEMERLVEEMLASGIIRPSNSPFSSP 582

Query: 182 VLLVKKKDGSWRFCVDYRAVNTATIPDKFSIPVVE 217
           VLLVKKKDGSWRFCVDYRAVN ATIPDKF IPV E
Sbjct: 583 VLLVKKKDGSWRFCVDYRAVNNATIPDKFPIPVAE 617

BLAST of Cmc10g0281111 vs. ExPASy TrEMBL
Match: A0A5D3DG34 (Eukaryotic translation initiation factor 3 30 kDa subunit OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold387G00130 PE=4 SV=1)

HSP 1 Score: 394.8 bits (1013), Expect = 2.3e-106
Identity = 188/215 (87.44%), Postives = 199/215 (92.56%), Query Frame = 0

Query: 2   NWKVKEEFLPLELGGVDVVLGMQWLHSLGVTVVDWKNLTLTFSSEGKQISIKGDPSLTKS 61
           NWKVKEEFLPLELGGVDVVLGMQWLHSLG+TVVDWKNLTLTF SEGKQISIKGDPSLTK 
Sbjct: 179 NWKVKEEFLPLELGGVDVVLGMQWLHSLGITVVDWKNLTLTFYSEGKQISIKGDPSLTKL 238

Query: 62  RISLKSMFKTWLDQDEGFLIDCRAIQVREENEQTNTATVIHEAEPLQNMLKQFGDVFDWP 121
           RISLKSM KTW++QDEGFLI+CRA+QV +ENE+ NTAT   E EPLQNMLKQF D+FDWP
Sbjct: 239 RISLKSMIKTWVEQDEGFLIECRAVQVHKENERINTATTTSEDEPLQNMLKQFEDIFDWP 298

Query: 122 EKLPPRRKIEHQIHLKEGTNPINVRPYKYGFQQKAEMEKLVEEMLTSGIIRPSNSPFSSP 181
           +KL PRR IEHQIHLKEGTNPINVRPY+YGFQQKAEME+LVEEMLTSGIIRPSNSPFSSP
Sbjct: 299 KKLSPRRGIEHQIHLKEGTNPINVRPYRYGFQQKAEMERLVEEMLTSGIIRPSNSPFSSP 358

Query: 182 VLLVKKKDGSWRFCVDYRAVNTATIPDKFSIPVVE 217
           VLLVKKKDGSWRFCVDYRAVN ATIPDK  IPV E
Sbjct: 359 VLLVKKKDGSWRFCVDYRAVNNATIPDKLPIPVAE 393

BLAST of Cmc10g0281111 vs. TAIR 10
Match: ATMG00850.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 48.5 bits (114), Expect = 7.7e-06
Identity = 21/39 (53.85%), Postives = 30/39 (76.92%), Query Frame = 0

Query: 154 QKAEMEKLVEEMLTSGIIRPSNSPFSSPVLLVKKKDGSW 193
           ++  ++  + EML + II+PS SP+SSPVLLV+KKDG W
Sbjct: 41  RRTRLKNWLGEMLEARIIQPSISPYSSPVLLVQKKDGGW 79

BLAST of Cmc10g0281111 vs. TAIR 10
Match: AT3G29750.1 (Eukaryotic aspartyl protease family protein )

HSP 1 Score: 43.9 bits (102), Expect = 1.9e-04
Identity = 21/51 (41.18%), Postives = 33/51 (64.71%), Query Frame = 0

Query: 4   KVKEEFLPLELG--GVDVVLGMQWLHSLGVTVVDWKNLTLTFSSEGKQISI 53
           ++ E FL L+L    VDV+LG +WL  LG T+V+W+N   +FS   + I++
Sbjct: 193 EITENFLLLDLAKTDVDVILGYEWLSKLGETMVNWQNQDFSFSHNQQWITL 243

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0056478.11.8e-121100.00transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa] >TYK29049.1 t... [more]
TYK14861.11.9e-10795.52Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa][more]
TYK02195.11.6e-10687.91Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa][more]
TYK06549.11.6e-10687.91transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa][more]
TYK22515.14.7e-10687.44transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Q993154.7e-1642.42Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20... [more]
Q7LHG54.7e-1642.42Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20... [more]
Q8I7P91.3e-1335.90Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogast... [more]
P208252.1e-1128.02Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste... [more]
P043238.6e-1033.33Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogast... [more]
Match NameE-valueIdentityDescription
A0A5A7UN058.7e-122100.00Transposon Tf2-1 polyprotein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 G... [more]
A0A5D3CSQ29.3e-10895.52Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A5D3BSP27.9e-10787.91Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A5D3C8607.9e-10787.91Transposon Tf2-1 polyprotein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 G... [more]
A0A5D3DG342.3e-10687.44Eukaryotic translation initiation factor 3 30 kDa subunit OS=Cucumis melo var. m... [more]
Match NameE-valueIdentityDescription
ATMG00850.17.7e-0653.85DNA/RNA polymerases superfamily protein [more]
AT3G29750.11.9e-0441.18Eukaryotic aspartyl protease family protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.10.10HIV Type 1 Reverse Transcriptase, subunit A, domain 1coord: 121..216
e-value: 6.1E-33
score: 115.5
NoneNo IPR availablePANTHERPTHR24559:SF319SUBFAMILY NOT NAMEDcoord: 5..215
NoneNo IPR availablePANTHERPTHR24559TRANSPOSON TY3-I GAG-POL POLYPROTEINcoord: 5..215
IPR021109Aspartic peptidase domain superfamilyGENE3D2.40.70.10Acid Proteasescoord: 1..55
e-value: 8.5E-6
score: 27.6
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 110..215

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc10g0281111.1Cmc10g0281111.1mRNA