Cmc10g0280791 (gene) Melon (Charmono) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTAGAATCTATGAATAAAGAGATGAATTTAGTAAATGTGAATAATACTTGGACCTTAGCTTCTCTACCTAAAGGATGCAAACCAACAACATCAAAGTGGATCTATAAACTTAAGAAGGGAATTACAAAAGATTCACAGCCTAGGTACAAGGCAAGGCTAGCAACAAAGAGTTTCACTCAAAGAGAAGGTATAGACTATTCTGAAATGTTCTCTCTTATTGTTAAACAGACTTCTATTAGATTTCTTCTATCCCTAGTTGCCCAAAACAACCTTGAGTTGGATCAACTTGATGTCAAGACAACCTTTGTTCATGGCTATCTAGATGAAACCATATGCATAGAGCAACTCAAAGGTTTTGAGGTATAA ATGGTAGAATCTATGAATAAAGAGATGAATTTAGTAAATGTGAATAATACTTGGACCTTAGCTTCTCTACCTAAAGGATGCAAACCAACAACATCAAAGTGGATCTATAAACTTAAGAAGGGAATTACAAAAGATTCACAGCCTAGGTACAAGGCAAGGCTAGCAACAAAGAGTTTCACTCAAAGAGAAGGTATAGACTATTCTGAAATGTTCTCTCTTATTGTTAAACAGACTTCTATTAGATTTCTTCTATCCCTAGTTGCCCAAAACAACCTTGAGTTGGATCAACTTGATGTCAAGACAACCTTTGTTCATGGCTATCTAGATGAAACCATATGCATAGAGCAACTCAAAGGTTTTGAGGTATAA ATGGTAGAATCTATGAATAAAGAGATGAATTTAGTAAATGTGAATAATACTTGGACCTTAGCTTCTCTACCTAAAGGATGCAAACCAACAACATCAAAGTGGATCTATAAACTTAAGAAGGGAATTACAAAAGATTCACAGCCTAGGTACAAGGCAAGGCTAGCAACAAAGAGTTTCACTCAAAGAGAAGGTATAGACTATTCTGAAATGTTCTCTCTTATTGTTAAACAGACTTCTATTAGATTTCTTCTATCCCTAGTTGCCCAAAACAACCTTGAGTTGGATCAACTTGATGTCAAGACAACCTTTGTTCATGGCTATCTAGATGAAACCATATGCATAGAGCAACTCAAAGGTTTTGAGGTATAA MVESMNKEMNLVNVNNTWTLASLPKGCKPTTSKWIYKLKKGITKDSQPRYKARLATKSFTQREGIDYSEMFSLIVKQTSIRFLLSLVAQNNLELDQLDVKTTFVHGYLDETICIEQLKGFEV Homology
BLAST of Cmc10g0280791 vs. NCBI nr
Match: RVW64151.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]) HSP 1 Score: 136.0 bits (341), Expect = 2.2e-28 Identity = 65/119 (54.62%), Postives = 88/119 (73.95%), Query Frame = 0
BLAST of Cmc10g0280791 vs. NCBI nr
Match: RVW79759.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]) HSP 1 Score: 136.0 bits (341), Expect = 2.2e-28 Identity = 66/119 (55.46%), Postives = 88/119 (73.95%), Query Frame = 0
BLAST of Cmc10g0280791 vs. NCBI nr
Match: RVW53628.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]) HSP 1 Score: 135.2 bits (339), Expect = 3.8e-28 Identity = 64/119 (53.78%), Postives = 87/119 (73.11%), Query Frame = 0
BLAST of Cmc10g0280791 vs. NCBI nr
Match: RVW69540.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]) HSP 1 Score: 134.8 bits (338), Expect = 5.0e-28 Identity = 64/119 (53.78%), Postives = 88/119 (73.95%), Query Frame = 0
BLAST of Cmc10g0280791 vs. NCBI nr
Match: RVX19256.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]) HSP 1 Score: 134.0 bits (336), Expect = 8.5e-28 Identity = 64/119 (53.78%), Postives = 88/119 (73.95%), Query Frame = 0
BLAST of Cmc10g0280791 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1) HSP 1 Score: 118.6 bits (296), Expect = 4.8e-26 Identity = 64/123 (52.03%), Postives = 87/123 (70.73%), Query Frame = 0
BLAST of Cmc10g0280791 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3) HSP 1 Score: 93.2 bits (230), Expect = 2.2e-18 Identity = 48/117 (41.03%), Postives = 73/117 (62.39%), Query Frame = 0
BLAST of Cmc10g0280791 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1) HSP 1 Score: 77.0 bits (188), Expect = 1.6e-13 Identity = 46/124 (37.10%), Postives = 66/124 (53.23%), Query Frame = 0
BLAST of Cmc10g0280791 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 2.8e-13 Identity = 46/123 (37.40%), Postives = 65/123 (52.85%), Query Frame = 0
BLAST of Cmc10g0280791 vs. ExPASy Swiss-Prot
Match: P92520 (Uncharacterized mitochondrial protein AtMg00820 OS=Arabidopsis thaliana OX=3702 GN=AtMg00820 PE=4 SV=1) HSP 1 Score: 50.8 bits (120), Expect = 1.2e-05 Identity = 32/94 (34.04%), Postives = 52/94 (55.32%), Query Frame = 0
BLAST of Cmc10g0280791 vs. ExPASy TrEMBL
Match: A0A438H5T2 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_291 PE=4 SV=1) HSP 1 Score: 136.0 bits (341), Expect = 1.1e-28 Identity = 66/119 (55.46%), Postives = 88/119 (73.95%), Query Frame = 0
BLAST of Cmc10g0280791 vs. ExPASy TrEMBL
Match: A0A438FW15 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_975 PE=4 SV=1) HSP 1 Score: 136.0 bits (341), Expect = 1.1e-28 Identity = 65/119 (54.62%), Postives = 88/119 (73.95%), Query Frame = 0
BLAST of Cmc10g0280791 vs. ExPASy TrEMBL
Match: A0A438F0U1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_3126 PE=4 SV=1) HSP 1 Score: 135.2 bits (339), Expect = 1.8e-28 Identity = 64/119 (53.78%), Postives = 87/119 (73.11%), Query Frame = 0
BLAST of Cmc10g0280791 vs. ExPASy TrEMBL
Match: A0A438GBJ4 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_1243 PE=4 SV=1) HSP 1 Score: 134.8 bits (338), Expect = 2.4e-28 Identity = 64/119 (53.78%), Postives = 88/119 (73.95%), Query Frame = 0
BLAST of Cmc10g0280791 vs. ExPASy TrEMBL
Match: A0A438EA44 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_275 PE=4 SV=1) HSP 1 Score: 134.0 bits (336), Expect = 4.1e-28 Identity = 64/119 (53.78%), Postives = 88/119 (73.95%), Query Frame = 0
BLAST of Cmc10g0280791 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 ) HSP 1 Score: 90.9 bits (224), Expect = 7.7e-19 Identity = 46/117 (39.32%), Postives = 72/117 (61.54%), Query Frame = 0
BLAST of Cmc10g0280791 vs. TAIR 10
Match: ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) ) HSP 1 Score: 50.8 bits (120), Expect = 8.8e-07 Identity = 32/94 (34.04%), Postives = 52/94 (55.32%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
Relationships
The following mRNA feature(s) are a part of this gene:
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