Cmc10g0280751 (gene) Melon (Charmono) v1.1

Overview
NameCmc10g0280751
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionReverse transcriptase Ty1/copia-type domain-containing protein
LocationCMiso1.1chr10: 18653114 .. 18653719 (-)
RNA-Seq ExpressionCmc10g0280751
SyntenyCmc10g0280751
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATAAAGCACACCCATTGAACATTCCAATGGTGGTTCGATCACTAGATTTAAAAAAGGATATCTTTCGACCTCGAGAAGATAATGAAGAATTACTTGGTCCTGAAGTACCGTACCTTAGTGCAATAGGTGCACTAATGTATCTTGCTAATAACATAAGACCAGATATAGCATTGTCAGTAAATTTGTTAGCAAGATATAGTTCTTCTCCAACAAAAAGACATTGGAATAAAGTTAAGCATGTACTTCGTTATCTTCGAGGGACAATTAATATGGATTTTTTTTATTCAAATAAATCAAACTTTGATCTAGTTGGTTATGCGAATGCTGGATATTTATCTGACCCACACAAAGCAAGATCTCAAACAGATTATATGTTTACATGTGAAGGAACTGTTATATCTTGGCGGTCTGTAAAGCAAACCATGACGGCCACTTCATCGAATCATGCAAAAATTCTTGCAATTTATGAAGCTAGTAGAGAATGTGTATGGTTGAGGTTAATGACTCATCATATTCGAAAAACATGTGGTTTGTCTTTCAGTAAAAGTTTACCAACAATATTATTTGAAGATAATACCGCATGTATAAAACAAATCAAATGA

mRNA sequence

ATGGATAAAGCACACCCATTGAACATTCCAATGGTGGTTCGATCACTAGATTTAAAAAAGGATATCTTTCGACCTCGAGAAGATAATGAAGAATTACTTGGTCCTGAAGTACCGTACCTTAGTGCAATAGGTGCACTAATGTATCTTGCTAATAACATAAGACCAGATATAGCATTGTCAGTAAATTTGTTAGCAAGATATAGTTCTTCTCCAACAAAAAGACATTGGAATAAAGTTAAGCATGTACTTCGTTATCTTCGAGGGACAATTAATATGGATTTTTTTTATTCAAATAAATCAAACTTTGATCTAGTTGGTTATGCGAATGCTGGATATTTATCTGACCCACACAAAGCAAGATCTCAAACAGATTATATGTTTACATGTGAAGGAACTGTTATATCTTGGCGGTCTGTAAAGCAAACCATGACGGCCACTTCATCGAATCATGCAAAAATTCTTGCAATTTATGAAGCTAGTAGAGAATGTGTATGGTTGAGGTTAATGACTCATCATATTCGAAAAACATGTGGTTTGTCTTTCAGTAAAAGTTTACCAACAATATTATTTGAAGATAATACCGCATGTATAAAACAAATCAAATGA

Coding sequence (CDS)

ATGGATAAAGCACACCCATTGAACATTCCAATGGTGGTTCGATCACTAGATTTAAAAAAGGATATCTTTCGACCTCGAGAAGATAATGAAGAATTACTTGGTCCTGAAGTACCGTACCTTAGTGCAATAGGTGCACTAATGTATCTTGCTAATAACATAAGACCAGATATAGCATTGTCAGTAAATTTGTTAGCAAGATATAGTTCTTCTCCAACAAAAAGACATTGGAATAAAGTTAAGCATGTACTTCGTTATCTTCGAGGGACAATTAATATGGATTTTTTTTATTCAAATAAATCAAACTTTGATCTAGTTGGTTATGCGAATGCTGGATATTTATCTGACCCACACAAAGCAAGATCTCAAACAGATTATATGTTTACATGTGAAGGAACTGTTATATCTTGGCGGTCTGTAAAGCAAACCATGACGGCCACTTCATCGAATCATGCAAAAATTCTTGCAATTTATGAAGCTAGTAGAGAATGTGTATGGTTGAGGTTAATGACTCATCATATTCGAAAAACATGTGGTTTGTCTTTCAGTAAAAGTTTACCAACAATATTATTTGAAGATAATACCGCATGTATAAAACAAATCAAATGA

Protein sequence

MDKAHPLNIPMVVRSLDLKKDIFRPREDNEELLGPEVPYLSAIGALMYLANNIRPDIALSVNLLARYSSSPTKRHWNKVKHVLRYLRGTINMDFFYSNKSNFDLVGYANAGYLSDPHKARSQTDYMFTCEGTVISWRSVKQTMTATSSNHAKILAIYEASRECVWLRLMTHHIRKTCGLSFSKSLPTILFEDNTACIKQIK
Homology
BLAST of Cmc10g0280751 vs. NCBI nr
Match: KAA0067250.1 (Pol [Cucumis melo var. makuwa] >TYK10859.1 Pol [Cucumis melo var. makuwa])

HSP 1 Score: 363.6 bits (932), Expect = 1.1e-96
Identity = 178/201 (88.56%), Postives = 186/201 (92.54%), Query Frame = 0

Query: 1   MDKAHPLNIPMVVRSLDLKKDIFRPREDNEELLGPEVPYLSAIGALMYLANNIRPDIALS 60
           MDKAHPLNIPMVVRSLD+KKDIFRPREDNEELLGPEVPYLSAIGALM LANN RPDIA S
Sbjct: 1   MDKAHPLNIPMVVRSLDVKKDIFRPREDNEELLGPEVPYLSAIGALMCLANNTRPDIAFS 60

Query: 61  VNLLARYSSSPTKRHWNKVKHVLRYLRGTINMDFFYSNKSNFDLVGYANAGYLSDPHKAR 120
           VNLLARYSSSPTKRHWN VKHVLRYLRGTI+M  FYSNKSNFDLVGYA+AGYLSDP KAR
Sbjct: 61  VNLLARYSSSPTKRHWNGVKHVLRYLRGTIDMSLFYSNKSNFDLVGYADAGYLSDPDKAR 120

Query: 121 SQTDYMFTCEGTVISWRSVKQTMTATSSNHAKILAIYEASRECVWLRLMTHHIRKTCGLS 180
           SQ  Y+FT  GT ISWRSVKQTMTATSSNHA+ILAI+E SRECVWLR MTHHIR+TCGLS
Sbjct: 121 SQIGYLFTWGGTAISWRSVKQTMTATSSNHAEILAIHEVSRECVWLRSMTHHIRETCGLS 180

Query: 181 FSKSLPTILFEDNTACIKQIK 202
           FSK+LPTILFEDNTACI QIK
Sbjct: 181 FSKNLPTILFEDNTACIAQIK 201

BLAST of Cmc10g0280751 vs. NCBI nr
Match: TYK21506.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 351.3 bits (900), Expect = 5.6e-93
Identity = 170/191 (89.01%), Postives = 181/191 (94.76%), Query Frame = 0

Query: 11  MVVRSLDLKKDIFRPREDNEELLGPEVPYLSAIGALMYLANNIRPDIALSVNLLARYSSS 70
           M+VRSLD+KKDIFRPREDNEELLGPEVPYLSAIGALMYLANN RPDIA SVNLLARYS S
Sbjct: 1   MLVRSLDVKKDIFRPREDNEELLGPEVPYLSAIGALMYLANNTRPDIAFSVNLLARYSYS 60

Query: 71  PTKRHWNKVKHVLRYLRGTINMDFFYSNKSNFDLVGYANAGYLSDPHKARSQTDYMFTCE 130
           PTKRHWN VKHVLRYLRGTI+M  FYSNKSNFDLVGYA+AG+LSDPHKARSQT Y+FTCE
Sbjct: 61  PTKRHWNGVKHVLRYLRGTIDMGLFYSNKSNFDLVGYADAGHLSDPHKARSQTGYLFTCE 120

Query: 131 GTVISWRSVKQTMTATSSNHAKILAIYEASRECVWLRLMTHHIRKTCGLSFSKSLPTILF 190
           GT ISWRSVKQTMTATSSNHA+ILAI+EASRECVWLR MTH+IR+TCGLSFSK+LPTILF
Sbjct: 121 GTAISWRSVKQTMTATSSNHAEILAIHEASRECVWLRSMTHYIRETCGLSFSKNLPTILF 180

Query: 191 EDNTACIKQIK 202
           EDNTACI QIK
Sbjct: 181 EDNTACITQIK 191

BLAST of Cmc10g0280751 vs. NCBI nr
Match: ERM98543.1 (hypothetical protein AMTR_s04311p00004950, partial [Amborella trichopoda])

HSP 1 Score: 315.1 bits (806), Expect = 4.4e-82
Identity = 149/201 (74.13%), Postives = 172/201 (85.57%), Query Frame = 0

Query: 1   MDKAHPLNIPMVVRSLDLKKDIFRPREDNEELLGPEVPYLSAIGALMYLANNIRPDIALS 60
           MDK+HPL+ PMVVRSLD++KD FRPRE++EELLGPEVPYLSAIGALMYLAN  RPDIA S
Sbjct: 13  MDKSHPLSSPMVVRSLDVEKDPFRPREEHEELLGPEVPYLSAIGALMYLANCTRPDIAFS 72

Query: 61  VNLLARYSSSPTKRHWNKVKHVLRYLRGTINMDFFYSNKSNFDLVGYANAGYLSDPHKAR 120
           VNLLAR+SS+PT RHW  +KH+LRYL+GTI+   FYSN     L+GYA+AGYLSDPHKAR
Sbjct: 73  VNLLARFSSAPTYRHWKGIKHILRYLQGTIDKGLFYSNNCGSQLIGYADAGYLSDPHKAR 132

Query: 121 SQTDYMFTCEGTVISWRSVKQTMTATSSNHAKILAIYEASRECVWLRLMTHHIRKTCGLS 180
           SQT Y+FTC  T ISWRS KQT+ ATSSNHA+ILAI+EASRECVWLR MT HIR TCGL+
Sbjct: 133 SQTGYLFTCGDTAISWRSTKQTLVATSSNHAEILAIHEASRECVWLRSMTQHIRGTCGLT 192

Query: 181 FSKSLPTILFEDNTACIKQIK 202
            +K +PTIL+EDN ACI Q+K
Sbjct: 193 SNKEVPTILYEDNAACIAQLK 213

BLAST of Cmc10g0280751 vs. NCBI nr
Match: RVW59189.1 (Copia protein [Vitis vinifera])

HSP 1 Score: 313.9 bits (803), Expect = 9.9e-82
Identity = 151/200 (75.50%), Postives = 169/200 (84.50%), Query Frame = 0

Query: 1   MDKAHPLNIPMVVRSLDLKKDIFRPREDNEELLGPEVPYLSAIGALMYLANNIRPDIALS 60
           MDKAHPL+ PMVVRSLD+KKD FRP E +EELLGPEVPYLSAIGALMYLAN  RPDIA S
Sbjct: 548 MDKAHPLSSPMVVRSLDVKKDPFRPCEKDEELLGPEVPYLSAIGALMYLANCTRPDIAFS 607

Query: 61  VNLLARYSSSPTKRHWNKVKHVLRYLRGTINMDFFYSNKSNFDLVGYANAGYLSDPHKAR 120
           VNLLARYSS+PT+RHWN +KH+LRYLRGT +M  FYS +S   L+GYA+AGYLSDPHK R
Sbjct: 608 VNLLARYSSAPTRRHWNGIKHILRYLRGTTDMGLFYSRESKQQLLGYADAGYLSDPHKGR 667

Query: 121 SQTDYMFTCEGTVISWRSVKQTMTATSSNHAKILAIYEASRECVWLRLMTHHIRKTCGLS 180
           SQT Y+F C GT ISWRSVKQTM ATSSNH++ILAI+EASREC+WLR M  HIR++CGLS
Sbjct: 668 SQTGYVFNCNGTAISWRSVKQTMVATSSNHSEILAIHEASRECIWLRSMIQHIRESCGLS 727

Query: 181 FSKSLPTILFEDNTACIKQI 201
             K  PT LFEDN ACI QI
Sbjct: 728 SIKGGPTTLFEDNAACIAQI 747

BLAST of Cmc10g0280751 vs. NCBI nr
Match: RVW48830.1 (Copia protein [Vitis vinifera])

HSP 1 Score: 313.9 bits (803), Expect = 9.9e-82
Identity = 151/200 (75.50%), Postives = 169/200 (84.50%), Query Frame = 0

Query: 1   MDKAHPLNIPMVVRSLDLKKDIFRPREDNEELLGPEVPYLSAIGALMYLANNIRPDIALS 60
           MDKAHPL+ PMVVRSLD+KKD FRP E +EELLGPEVPYLSAIGALMYLAN  RPDIA S
Sbjct: 1   MDKAHPLSSPMVVRSLDVKKDPFRPCEKDEELLGPEVPYLSAIGALMYLANCTRPDIAFS 60

Query: 61  VNLLARYSSSPTKRHWNKVKHVLRYLRGTINMDFFYSNKSNFDLVGYANAGYLSDPHKAR 120
           VNLLARYSS+PT+RHWN +KH+LRYLRGT +M  FYS +S   L+GYA+AGYLSDPHK R
Sbjct: 61  VNLLARYSSAPTRRHWNGIKHILRYLRGTTDMGLFYSRESKQQLLGYADAGYLSDPHKGR 120

Query: 121 SQTDYMFTCEGTVISWRSVKQTMTATSSNHAKILAIYEASRECVWLRLMTHHIRKTCGLS 180
           SQT Y+F C GT ISWRSVKQTM ATSSNH++ILAI+EASREC+WLR M  HIR++CGLS
Sbjct: 121 SQTGYVFNCNGTAISWRSVKQTMVATSSNHSEILAIHEASRECIWLRSMIQHIRESCGLS 180

Query: 181 FSKSLPTILFEDNTACIKQI 201
             K  PT LFEDN ACI QI
Sbjct: 181 SIKGDPTTLFEDNAACIAQI 200

BLAST of Cmc10g0280751 vs. ExPASy Swiss-Prot
Match: P0CV72 (Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 PE=2 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 6.8e-25
Identity = 56/138 (40.58%), Postives = 82/138 (59.42%), Query Frame = 0

Query: 37  VPYLSAIGALMYLANNIRPDIALSVNLLARYSSSPTKRHWNKVKHVLRYLRGTINMDFFY 96
           VPYLSA+GA+MYL    RPD+A +V +L++++S P   HW  +K VLRYL+ T      +
Sbjct: 4   VPYLSAVGAIMYLMVVTRPDLAAAVGVLSQFASDPCPTHWQALKRVLRYLQSTQTYGLEF 63

Query: 97  SNKSNFDLVGYANAGYLSDPHKARSQTDYMFTCEGTVISWRSVKQTMTATSSNHAKILAI 156
           +      LVGY++A +  D    RS + Y+F   G  +SWRS KQ   A SS   + +A+
Sbjct: 64  TRAGTAKLVGYSDADWAGDVESRRSTSGYLFKLNGGCVSWRSKKQRTVALSSTEDEYMAL 123

Query: 157 YEASRECVWLRLMTHHIR 175
            EA++E VWL + T   +
Sbjct: 124 SEATQEAVWLTVRTRRTK 141

BLAST of Cmc10g0280751 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 107.5 bits (267), Expect = 1.8e-22
Identity = 60/180 (33.33%), Postives = 94/180 (52.22%), Query Frame = 0

Query: 25   PREDNEELLGPE----VPYLSAIGALMYLANNIRPDIALSVNLLARYSSSPTKRHWNKVK 84
            P + N ELL  +     P  S IG LMY+    RPD+  +VN+L+RYSS      W  +K
Sbjct: 1163 PSKINYELLNSDEDCNTPCRSLIGCLMYIMLCTRPDLTTAVNILSRYSSKNNSELWQNLK 1222

Query: 85   HVLRYLRGTINMDFFYSNKSNFD--LVGYANAGYLSDPHKARSQTDYMFTC-EGTVISWR 144
             VLRYL+GTI+M   +     F+  ++GY ++ +       +S T Y+F   +  +I W 
Sbjct: 1223 RVLRYLKGTIDMKLIFKKNLAFENKIIGYVDSDWAGSEIDRKSTTGYLFKMFDFNLICWN 1282

Query: 145  SVKQTMTATSSNHAKILAIYEASRECVWLRLMTHHIRKTCGLSFSKSLPTILFEDNTACI 198
            + +Q   A SS  A+ +A++EA RE +WL+ +         ++     P  ++EDN  CI
Sbjct: 1283 TKRQNSVAASSTEAEYMALFEAVREALWLKFL------LTSINIKLENPIKIYEDNQGCI 1336

BLAST of Cmc10g0280751 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 7.0e-22
Identity = 64/167 (38.32%), Postives = 90/167 (53.89%), Query Frame = 0

Query: 1    MDKAHPLNIPMVVRSLDLKKDIFRPREDNEELLGPEVPYLSAIGALMYLANNIRPDIALS 60
            M  A P++ P+    L L K +  P    E+    +VPY SA+G+LMY     RPDIA +
Sbjct: 1075 MKNAKPVSTPL-AGHLKLSKKMC-PTTVEEKGNMAKVPYSSAVGSLMYAMVCTRPDIAHA 1134

Query: 61   VNLLARYSSSPTKRHWNKVKHVLRYLRGTINMDFFYSNKSNFDLVGYANAGYLSDPHKAR 120
            V +++R+  +P K HW  VK +LRYLRGT   D      S+  L GY +A    D    +
Sbjct: 1135 VGVVSRFLENPGKEHWEAVKWILRYLRGTTG-DCLCFGGSDPILKGYTDADMAGDIDNRK 1194

Query: 121  SQTDYMFTCEGTVISWRSVKQTMTATSSNHAKILAIYEASRECVWLR 168
            S T Y+FT  G  ISW+S  Q   A S+  A+ +A  E  +E +WL+
Sbjct: 1195 SSTGYLFTFSGGAISWQSKLQKCVALSTTEAEYIAATETGKEMIWLK 1238

BLAST of Cmc10g0280751 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 1.1e-14
Identity = 52/156 (33.33%), Postives = 74/156 (47.44%), Query Frame = 0

Query: 39   YLSAIGALMYLANNIRPDIALSVNLLARYSSSPTKRHWNKVKHVLRYLRGTINMDFFYSN 98
            Y   +G+L YLA   RPD++ +VN L++Y   PT  HWN +K VLRYL GT +   F   
Sbjct: 1228 YRGIVGSLQYLAFT-RPDLSYAVNRLSQYMHMPTDDHWNALKRVLRYLAGTPDHGIFLKK 1287

Query: 99   KSNFDLVGYANAGYLSDPHKARSQTDYMFTCEGTVISWRSVKQTMTATSSNHAKILAIYE 158
             +   L  Y++A +  D     S   Y+       ISW S KQ     SS  A+  ++  
Sbjct: 1288 GNTLSLHAYSDADWAGDTDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYRSVAN 1347

Query: 159  ASRECVWL-RLMTHHIRKTCGLSFSKSLPTILFEDN 194
             S E  W+  L+T        L    S P +++ DN
Sbjct: 1348 TSSELQWICSLLTE-------LGIQLSHPPVIYCDN 1375

BLAST of Cmc10g0280751 vs. ExPASy Swiss-Prot
Match: P92519 (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 6.8e-09
Identity = 35/127 (27.56%), Postives = 62/127 (48.82%), Query Frame = 0

Query: 39  YLSAIGALMYLANNIRPDIALSVNLLARYSSSPTKRHWNKVKHVLRYLRGTINMDFFYSN 98
           + S +GAL YL    RPDI+ +VN++ +    PT   ++ +K VLRY++GTI    +   
Sbjct: 100 FRSIVGALQYLTLT-RPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHK 159

Query: 99  KSNFDLVGYANAGYLSDPHKARSQTDYMFTCEGTVISWRSVKQTMTATSSNHAKILAIYE 158
            S  ++  + ++ +       RS T +       +ISW + +Q   + SS   +  A+  
Sbjct: 160 NSKLNVQAFCDSDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALAL 219

Query: 159 ASRECVW 166
            + E  W
Sbjct: 220 TAAELTW 225

BLAST of Cmc10g0280751 vs. ExPASy TrEMBL
Match: A0A5D3CKU4 (Pol OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold231G00300 PE=4 SV=1)

HSP 1 Score: 363.6 bits (932), Expect = 5.3e-97
Identity = 178/201 (88.56%), Postives = 186/201 (92.54%), Query Frame = 0

Query: 1   MDKAHPLNIPMVVRSLDLKKDIFRPREDNEELLGPEVPYLSAIGALMYLANNIRPDIALS 60
           MDKAHPLNIPMVVRSLD+KKDIFRPREDNEELLGPEVPYLSAIGALM LANN RPDIA S
Sbjct: 1   MDKAHPLNIPMVVRSLDVKKDIFRPREDNEELLGPEVPYLSAIGALMCLANNTRPDIAFS 60

Query: 61  VNLLARYSSSPTKRHWNKVKHVLRYLRGTINMDFFYSNKSNFDLVGYANAGYLSDPHKAR 120
           VNLLARYSSSPTKRHWN VKHVLRYLRGTI+M  FYSNKSNFDLVGYA+AGYLSDP KAR
Sbjct: 61  VNLLARYSSSPTKRHWNGVKHVLRYLRGTIDMSLFYSNKSNFDLVGYADAGYLSDPDKAR 120

Query: 121 SQTDYMFTCEGTVISWRSVKQTMTATSSNHAKILAIYEASRECVWLRLMTHHIRKTCGLS 180
           SQ  Y+FT  GT ISWRSVKQTMTATSSNHA+ILAI+E SRECVWLR MTHHIR+TCGLS
Sbjct: 121 SQIGYLFTWGGTAISWRSVKQTMTATSSNHAEILAIHEVSRECVWLRSMTHHIRETCGLS 180

Query: 181 FSKSLPTILFEDNTACIKQIK 202
           FSK+LPTILFEDNTACI QIK
Sbjct: 181 FSKNLPTILFEDNTACIAQIK 201

BLAST of Cmc10g0280751 vs. ExPASy TrEMBL
Match: A0A5D3DD63 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold518G00010 PE=4 SV=1)

HSP 1 Score: 351.3 bits (900), Expect = 2.7e-93
Identity = 170/191 (89.01%), Postives = 181/191 (94.76%), Query Frame = 0

Query: 11  MVVRSLDLKKDIFRPREDNEELLGPEVPYLSAIGALMYLANNIRPDIALSVNLLARYSSS 70
           M+VRSLD+KKDIFRPREDNEELLGPEVPYLSAIGALMYLANN RPDIA SVNLLARYS S
Sbjct: 1   MLVRSLDVKKDIFRPREDNEELLGPEVPYLSAIGALMYLANNTRPDIAFSVNLLARYSYS 60

Query: 71  PTKRHWNKVKHVLRYLRGTINMDFFYSNKSNFDLVGYANAGYLSDPHKARSQTDYMFTCE 130
           PTKRHWN VKHVLRYLRGTI+M  FYSNKSNFDLVGYA+AG+LSDPHKARSQT Y+FTCE
Sbjct: 61  PTKRHWNGVKHVLRYLRGTIDMGLFYSNKSNFDLVGYADAGHLSDPHKARSQTGYLFTCE 120

Query: 131 GTVISWRSVKQTMTATSSNHAKILAIYEASRECVWLRLMTHHIRKTCGLSFSKSLPTILF 190
           GT ISWRSVKQTMTATSSNHA+ILAI+EASRECVWLR MTH+IR+TCGLSFSK+LPTILF
Sbjct: 121 GTAISWRSVKQTMTATSSNHAEILAIHEASRECVWLRSMTHYIRETCGLSFSKNLPTILF 180

Query: 191 EDNTACIKQIK 202
           EDNTACI QIK
Sbjct: 181 EDNTACITQIK 191

BLAST of Cmc10g0280751 vs. ExPASy TrEMBL
Match: U5CXL6 (Uncharacterized protein (Fragment) OS=Amborella trichopoda OX=13333 GN=AMTR_s04311p00004950 PE=4 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 2.1e-82
Identity = 149/201 (74.13%), Postives = 172/201 (85.57%), Query Frame = 0

Query: 1   MDKAHPLNIPMVVRSLDLKKDIFRPREDNEELLGPEVPYLSAIGALMYLANNIRPDIALS 60
           MDK+HPL+ PMVVRSLD++KD FRPRE++EELLGPEVPYLSAIGALMYLAN  RPDIA S
Sbjct: 13  MDKSHPLSSPMVVRSLDVEKDPFRPREEHEELLGPEVPYLSAIGALMYLANCTRPDIAFS 72

Query: 61  VNLLARYSSSPTKRHWNKVKHVLRYLRGTINMDFFYSNKSNFDLVGYANAGYLSDPHKAR 120
           VNLLAR+SS+PT RHW  +KH+LRYL+GTI+   FYSN     L+GYA+AGYLSDPHKAR
Sbjct: 73  VNLLARFSSAPTYRHWKGIKHILRYLQGTIDKGLFYSNNCGSQLIGYADAGYLSDPHKAR 132

Query: 121 SQTDYMFTCEGTVISWRSVKQTMTATSSNHAKILAIYEASRECVWLRLMTHHIRKTCGLS 180
           SQT Y+FTC  T ISWRS KQT+ ATSSNHA+ILAI+EASRECVWLR MT HIR TCGL+
Sbjct: 133 SQTGYLFTCGDTAISWRSTKQTLVATSSNHAEILAIHEASRECVWLRSMTQHIRGTCGLT 192

Query: 181 FSKSLPTILFEDNTACIKQIK 202
            +K +PTIL+EDN ACI Q+K
Sbjct: 193 SNKEVPTILYEDNAACIAQLK 213

BLAST of Cmc10g0280751 vs. ExPASy TrEMBL
Match: A0A2N9IR78 (Reverse transcriptase Ty1/copia-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS54505 PE=4 SV=1)

HSP 1 Score: 314.3 bits (804), Expect = 3.7e-82
Identity = 153/201 (76.12%), Postives = 170/201 (84.58%), Query Frame = 0

Query: 1   MDKAHPLNIPMVVRSLDLKKDIFRPREDNEELLGPEVPYLSAIGALMYLANNIRPDIALS 60
           MDKAHPL+ PMVVRSLD+KKD FRP+E  EE LGPEVPYLSAIGALMYLAN  RPDIA S
Sbjct: 332 MDKAHPLSTPMVVRSLDVKKDPFRPQEVGEETLGPEVPYLSAIGALMYLANCTRPDIAFS 391

Query: 61  VNLLARYSSSPTKRHWNKVKHVLRYLRGTINMDFFYSNKSNFDLVGYANAGYLSDPHKAR 120
           VNLLARYSS+PT RHWN VKHVLRYLRGT +M  FY NKSN  LVGYA+AGYLSDPHK R
Sbjct: 392 VNLLARYSSAPTLRHWNGVKHVLRYLRGTTDMGLFYPNKSNPQLVGYADAGYLSDPHKGR 451

Query: 121 SQTDYMFTCEGTVISWRSVKQTMTATSSNHAKILAIYEASRECVWLRLMTHHIRKTCGLS 180
           SQT Y+FTC  T ISWRSVKQT++ATSSNH++I+AI+EASRECVWLR +  HIR+ CGLS
Sbjct: 452 SQTGYLFTCGNTAISWRSVKQTISATSSNHSEIIAIHEASRECVWLRSVIQHIREKCGLS 511

Query: 181 FSKSLPTILFEDNTACIKQIK 202
             K  PTIL+EDN ACI QI+
Sbjct: 512 SIKDNPTILYEDNAACITQIR 532

BLAST of Cmc10g0280751 vs. ExPASy TrEMBL
Match: A0A2N9FE48 (Reverse transcriptase Ty1/copia-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS13021 PE=4 SV=1)

HSP 1 Score: 314.3 bits (804), Expect = 3.7e-82
Identity = 153/201 (76.12%), Postives = 170/201 (84.58%), Query Frame = 0

Query: 1   MDKAHPLNIPMVVRSLDLKKDIFRPREDNEELLGPEVPYLSAIGALMYLANNIRPDIALS 60
           MDKAHPL+ PMVVRSLD+KKD FRP+E  EE LGPEVPYLSAIGALMYLAN  RPDIA S
Sbjct: 103 MDKAHPLSTPMVVRSLDVKKDPFRPQEVGEETLGPEVPYLSAIGALMYLANCTRPDIAFS 162

Query: 61  VNLLARYSSSPTKRHWNKVKHVLRYLRGTINMDFFYSNKSNFDLVGYANAGYLSDPHKAR 120
           VNLLARYSS+PT RHWN VKHVLRYLRGT +M  FY NKSN  LVGYA+AGYLSDPHK R
Sbjct: 163 VNLLARYSSAPTLRHWNGVKHVLRYLRGTTDMGLFYPNKSNPQLVGYADAGYLSDPHKGR 222

Query: 121 SQTDYMFTCEGTVISWRSVKQTMTATSSNHAKILAIYEASRECVWLRLMTHHIRKTCGLS 180
           SQT Y+FTC  T ISWRSVKQT++ATSSNH++I+AI+EASRECVWLR +  HIR+ CGLS
Sbjct: 223 SQTGYLFTCGNTAISWRSVKQTISATSSNHSEIIAIHEASRECVWLRSVIQHIREKCGLS 282

Query: 181 FSKSLPTILFEDNTACIKQIK 202
             K  PTIL+EDN ACI QI+
Sbjct: 283 SIKDNPTILYEDNAACITQIR 303

BLAST of Cmc10g0280751 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 89.4 bits (220), Expect = 3.7e-18
Identity = 56/159 (35.22%), Postives = 85/159 (53.46%), Query Frame = 0

Query: 39  YLSAIGALMYLANNIRPDIALSVNLLARYSSSPTKRHWNKVKHVLRYLRGTINMDFFYSN 98
           Y   IG LMYL    R DI+ +VN L+++S +P   H   V  +L Y++GT+    FYS+
Sbjct: 378 YRRLIGRLMYL-QITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSS 437

Query: 99  KSNFDLVGYANAGYLSDPHKARSQTDYMFTCEGTVISWRSVKQTMTATSSNHAKILAIYE 158
           ++   L  +++A + S     RS   Y      ++ISW+S KQ + + SS  A+  A+  
Sbjct: 438 QAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSF 497

Query: 159 ASRECVWLRLMTHHIRKTCGLSFSKSLPTILFEDNTACI 198
           A+ E +WL      ++    L  SK  PT+LF DNTA I
Sbjct: 498 ATDEMMWLAQFFRELQ----LPLSK--PTLLFCDNTAAI 529

BLAST of Cmc10g0280751 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 62.4 bits (150), Expect = 4.8e-10
Identity = 35/127 (27.56%), Postives = 62/127 (48.82%), Query Frame = 0

Query: 39  YLSAIGALMYLANNIRPDIALSVNLLARYSSSPTKRHWNKVKHVLRYLRGTINMDFFYSN 98
           + S +GAL YL    RPDI+ +VN++ +    PT   ++ +K VLRY++GTI    +   
Sbjct: 100 FRSIVGALQYLTLT-RPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHK 159

Query: 99  KSNFDLVGYANAGYLSDPHKARSQTDYMFTCEGTVISWRSVKQTMTATSSNHAKILAIYE 158
            S  ++  + ++ +       RS T +       +ISW + +Q   + SS   +  A+  
Sbjct: 160 NSKLNVQAFCDSDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALAL 219

Query: 159 ASRECVW 166
            + E  W
Sbjct: 220 TAAELTW 225

BLAST of Cmc10g0280751 vs. TAIR 10
Match: ATMG00240.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 52.4 bits (124), Expect = 5.0e-07
Identity = 28/79 (35.44%), Postives = 43/79 (54.43%), Query Frame = 0

Query: 47  MYLANNIRPDIALSVNLLARYSSSPTKRHWNKVKHVLRYLRGTINMDFFYSNKSNFDLVG 106
           MYL    RPD+  +VN L+++SS+        V  VL Y++GT+    FYS  S+  L  
Sbjct: 1   MYLTIT-RPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKA 60

Query: 107 YANAGYLSDPHKARSQTDY 126
           +A++ + S P   RS T +
Sbjct: 61  FADSDWASCPDTRRSVTGF 78

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0067250.11.1e-9688.56Pol [Cucumis melo var. makuwa] >TYK10859.1 Pol [Cucumis melo var. makuwa][more]
TYK21506.15.6e-9389.01Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m... [more]
ERM98543.14.4e-8274.13hypothetical protein AMTR_s04311p00004950, partial [Amborella trichopoda][more]
RVW59189.19.9e-8275.50Copia protein [Vitis vinifera][more]
RVW48830.19.9e-8275.50Copia protein [Vitis vinifera][more]
Match NameE-valueIdentityDescription
P0CV726.8e-2540.58Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 P... [more]
P041461.8e-2233.33Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3[more]
P109787.0e-2238.32Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... [more]
Q9ZT941.1e-1433.33Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... [more]
P925196.8e-0927.56Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 ... [more]
Match NameE-valueIdentityDescription
A0A5D3CKU45.3e-9788.56Pol OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold231G00300 PE=4 SV=1[more]
A0A5D3DD632.7e-9389.01Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... [more]
U5CXL62.1e-8274.13Uncharacterized protein (Fragment) OS=Amborella trichopoda OX=13333 GN=AMTR_s043... [more]
A0A2N9IR783.7e-8276.12Reverse transcriptase Ty1/copia-type domain-containing protein OS=Fagus sylvatic... [more]
A0A2N9FE483.7e-8276.12Reverse transcriptase Ty1/copia-type domain-containing protein OS=Fagus sylvatic... [more]
Match NameE-valueIdentityDescription
AT4G23160.13.7e-1835.22cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [more]
ATMG00810.14.8e-1027.56DNA/RNA polymerases superfamily protein [more]
ATMG00240.15.0e-0735.44Gag-Pol-related retrotransposon family protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11439:SF308SUBFAMILY NOT NAMEDcoord: 34..129
NoneNo IPR availablePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 34..129
NoneNo IPR availableCDDcd09272RNase_HI_RT_Ty1coord: 105..201
e-value: 1.96346E-25
score: 94.0721

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc10g0280751.1Cmc10g0280751.1mRNA