Cmc10g0280491 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc10g0280491
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr10: 18206699 .. 18208558 (+)
RNA-Seq Expression	Cmc10g0280491
Synteny	Cmc10g0280491

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTGGACTTTGATGTAATCCTGGGTATGGATTGGCTGGCCGCTAACCACGCCAGCATAGATTGTTCACGTAAGGAGGTAACGTTTAACCCTCCCTCGTTGGCCAGTTTTAAATTTAAGGGAGGAGGGTCAAAGTCGTTGCCTCAGGTAATCTCGGCCATCAGGGCCAGTAAACTGCTCAGTCAGGGTACTTGGGGTATCTTAGCGAGTGTGGTGGATACTAGAGAGGCGGATGTATCCCTGTCGTCAGAACCAGTAGTGAGGGACTATCCGGACGTTTTTCCTGAGGAACTTCCAGGGTTACCTCCGCACAGGGAGGTTGAGTTTGCCATAGAGTTGGAGCCGGGCACGGTTCCTATATCCAGAGCCCCTTACAGAATGGCCCCCGCAGAACTGAAAGAACTGAAGGTACAGTTGCAGGAATTGCTTGATAAGGGATTCATTCGACCGAGCGTGTCACCTTGGGGTGCGCTAGTCTTATTCGTTAAGAAGAAGGACGGATCGATGCGTCTGTGCATTGACTATAGGGAGTTGAACAAAGTAACAGTAAAGAACAGATATCCCTTACCCAGGATAGACGATCTATTTGACCAGTTACAGGGAGCCACAGTGTTCTCTAAGATTGATCTTCGGTCGGGGTACCATCAGCTGAGAATTAAGGATGAGGATGTACCGAAGACAGCATTTCGTTCCAGATATGGACACTACGAGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCCAGCAGTGTTTATGGACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGATACTTTTGTGATTGTGTTTATCGACGATATCTTGATATACTCTAAGACGGAGGCCGAACACGAGGAGCACTTACGTATGGTTTTGCAAACACTTCGGGATAATAAGTTGTACGCAAAGTTCTCGAAGTGCGAGTTTTGGCTGAAGCAGGTGTCCTTTCTGGGCCACGTGGTTTCTAAGGCTGGAGTCTCTGTAGATCCAGCTAAGATAGAGGCAGTCACTGGTTGGACCCGACCTTCCACAGTCAGTGAGGTTCGTAGCTTTCTGGGTTTAGCAGGCTATTATCGACGGTTTGTGGAGAACTTTTCTCGTATAGCTACTCCTCTTACTCAGTTGACCAGAAAGGGAGTTCCTTTTGTTTGGAGCAAGGCATGTGAGGACAGTTTCCAGACCCTTAAACAGAAGCTAGTTACCGCACCAGTTCTCACGGTACCCGATGGTTCTGGCAGTTTCGTGATTTATAGTGATGCTTCCAAGAAGGGTCTGGGTTGTGTTTTGATGCAGCAGGGTAAAGTGGTCGCTTATGCGTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACACATGATCTAGAGTTGGCAGCAGTGGTTTTTGCTTTGAAAATATGGAGGCATTATTTATATGGTGAAAAGATACAGATATTCACAGATCATAAGAGCTTGAAATACTTCTTTACTCAGAAAGAATTGAATATGAGACAGCGAAGGTGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATATTGTATCATCCAGGCAAGGCAAATGTGGTAGCTGATGCTCTTAGTAGGAAAGTATCACATTCAGCAGCACTTATTACCCGGCAGGCCCCATTGCATCGGGATCTCGAGCGGGCTGAGATTGCAGTGTCAGTGGGGGCAGTTACTATGCAGTTAGCCCAGTTGACGCTACAGCCGACTTTGAGGCAAAGGATCATTGATGCTCAGAGTAACGATCCTTATCTGGTTGAGAAACGTGGCCTAGCAGAGGCAGGGCAAGCGGTTGAGTTCTCATTATCCTCTGATGGTGGACTGTTGTTTGAGAGACGCCTCTGTGTTCCGTAA

mRNA sequence

ATGCTGGACTTTGATGTAATCCTGGGTATGGATTGGCTGGCCGCTAACCACGCCAGCATAGATTGTTCACGTAAGGAGGTAACGTTTAACCCTCCCTCGTTGGCCAGTTTTAAATTTAAGGGAGGAGGGTCAAAGTCGTTGCCTCAGGTAATCTCGGCCATCAGGGCCAGTAAACTGCTCAGTCAGGGTACTTGGGGTATCTTAGCGAGTGTGGTGGATACTAGAGAGGCGGATGTATCCCTGTCGTCAGAACCAGTAGTGAGGGACTATCCGGACGTTTTTCCTGAGGAACTTCCAGGGTTACCTCCGCACAGGGAGGTTGAGTTTGCCATAGAGTTGGAGCCGGGCACGGTTCCTATATCCAGAGCCCCTTACAGAATGGCCCCCGCAGAACTGAAAGAACTGAAGGTACAGTTGCAGGAATTGCTTGATAAGGGATTCATTCGACCGAGCGTGTCACCTTGGGGTGCGCTAGTCTTATTCGTTAAGAAGAAGGACGGATCGATGCGTCTGTGCATTGACTATAGGGAGTTGAACAAAGTAACAGTAAAGAACAGATATCCCTTACCCAGGATAGACGATCTATTTGACCAGTTACAGGGAGCCACAGTGTTCTCTAAGATTGATCTTCGGTCGGGGTACCATCAGCTGAGAATTAAGGATGAGGATGTACCGAAGACAGCATTTCGTTCCAGATATGGACACTACGAGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCCAGCAGTGTTTATGGACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGATACTTTTGTGATTGTGTTTATCGACGATATCTTGATATACTCTAAGACGGAGGCCGAACACGAGGAGCACTTACGTATGGTTTTGCAAACACTTCGGGATAATAAGTTGTACGCAAAGTTCTCGAAGTGCGAGTTTTGGCTGAAGCAGGTGTCCTTTCTGGGCCACGTGGTTTCTAAGGCTGGAGTCTCTGTAGATCCAGCTAAGATAGAGGCAGTCACTGGTTGGACCCGACCTTCCACAGTCAGTGAGGTTCGTAGCTTTCTGGGTTTAGCAGGCTATTATCGACGGTTTGTGGAGAACTTTTCTCGTATAGCTACTCCTCTTACTCAGTTGACCAGAAAGGGAGTTCCTTTTGTTTGGAGCAAGGCATGTGAGGACAGTTTCCAGACCCTTAAACAGAAGCTAGTTACCGCACCAGTTCTCACGGTACCCGATGGTTCTGGCAGTTTCGTGATTTATAGTGATGCTTCCAAGAAGGGTCTGGGTTGTGTTTTGATGCAGCAGGGTAAAGTGGTCGCTTATGCGTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACACATGATCTAGAGTTGGCAGCAGTGGTTTTTGCTTTGAAAATATGGAGGCATTATTTATATGGTGAAAAGATACAGATATTCACAGATCATAAGAGCTTGAAATACTTCTTTACTCAGAAAGAATTGAATATGAGACAGCGAAGGTGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATATTGTATCATCCAGGCAAGGCAAATGTGGTAGCTGATGCTCTTAGTAGGAAAGTATCACATTCAGCAGCACTTATTACCCGGCAGGCCCCATTGCATCGGGATCTCGAGCGGGCTGAGATTGCAGTGTCAGTGGGGGCAGTTACTATGCAGTTAGCCCAGTTGACGCTACAGCCGACTTTGAGGCAAAGGATCATTGATGCTCAGAGTAACGATCCTTATCTGGTTGAGAAACGTGGCCTAGCAGAGGCAGGGCAAGCGGTTGAGTTCTCATTATCCTCTGATGGTGGACTGTTGTTTGAGAGACGCCTCTGTGTTCCGTAA

Coding sequence (CDS)

ATGCTGGACTTTGATGTAATCCTGGGTATGGATTGGCTGGCCGCTAACCACGCCAGCATAGATTGTTCACGTAAGGAGGTAACGTTTAACCCTCCCTCGTTGGCCAGTTTTAAATTTAAGGGAGGAGGGTCAAAGTCGTTGCCTCAGGTAATCTCGGCCATCAGGGCCAGTAAACTGCTCAGTCAGGGTACTTGGGGTATCTTAGCGAGTGTGGTGGATACTAGAGAGGCGGATGTATCCCTGTCGTCAGAACCAGTAGTGAGGGACTATCCGGACGTTTTTCCTGAGGAACTTCCAGGGTTACCTCCGCACAGGGAGGTTGAGTTTGCCATAGAGTTGGAGCCGGGCACGGTTCCTATATCCAGAGCCCCTTACAGAATGGCCCCCGCAGAACTGAAAGAACTGAAGGTACAGTTGCAGGAATTGCTTGATAAGGGATTCATTCGACCGAGCGTGTCACCTTGGGGTGCGCTAGTCTTATTCGTTAAGAAGAAGGACGGATCGATGCGTCTGTGCATTGACTATAGGGAGTTGAACAAAGTAACAGTAAAGAACAGATATCCCTTACCCAGGATAGACGATCTATTTGACCAGTTACAGGGAGCCACAGTGTTCTCTAAGATTGATCTTCGGTCGGGGTACCATCAGCTGAGAATTAAGGATGAGGATGTACCGAAGACAGCATTTCGTTCCAGATATGGACACTACGAGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCCAGCAGTGTTTATGGACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGATACTTTTGTGATTGTGTTTATCGACGATATCTTGATATACTCTAAGACGGAGGCCGAACACGAGGAGCACTTACGTATGGTTTTGCAAACACTTCGGGATAATAAGTTGTACGCAAAGTTCTCGAAGTGCGAGTTTTGGCTGAAGCAGGTGTCCTTTCTGGGCCACGTGGTTTCTAAGGCTGGAGTCTCTGTAGATCCAGCTAAGATAGAGGCAGTCACTGGTTGGACCCGACCTTCCACAGTCAGTGAGGTTCGTAGCTTTCTGGGTTTAGCAGGCTATTATCGACGGTTTGTGGAGAACTTTTCTCGTATAGCTACTCCTCTTACTCAGTTGACCAGAAAGGGAGTTCCTTTTGTTTGGAGCAAGGCATGTGAGGACAGTTTCCAGACCCTTAAACAGAAGCTAGTTACCGCACCAGTTCTCACGGTACCCGATGGTTCTGGCAGTTTCGTGATTTATAGTGATGCTTCCAAGAAGGGTCTGGGTTGTGTTTTGATGCAGCAGGGTAAAGTGGTCGCTTATGCGTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACACATGATCTAGAGTTGGCAGCAGTGGTTTTTGCTTTGAAAATATGGAGGCATTATTTATATGGTGAAAAGATACAGATATTCACAGATCATAAGAGCTTGAAATACTTCTTTACTCAGAAAGAATTGAATATGAGACAGCGAAGGTGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATATTGTATCATCCAGGCAAGGCAAATGTGGTAGCTGATGCTCTTAGTAGGAAAGTATCACATTCAGCAGCACTTATTACCCGGCAGGCCCCATTGCATCGGGATCTCGAGCGGGCTGAGATTGCAGTGTCAGTGGGGGCAGTTACTATGCAGTTAGCCCAGTTGACGCTACAGCCGACTTTGAGGCAAAGGATCATTGATGCTCAGAGTAACGATCCTTATCTGGTTGAGAAACGTGGCCTAGCAGAGGCAGGGCAAGCGGTTGAGTTCTCATTATCCTCTGATGGTGGACTGTTGTTTGAGAGACGCCTCTGTGTTCCGTAA

Protein sequence

MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSLASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGALVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGVPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTLQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVP

Homology

[Close]

BLAST of Cmc10g0280491 vs. NCBI nr
Match: TYK01613.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1225.7 bits (3170), Expect = 0.0e+00
Identity = 613/619 (99.03%), Postives = 615/619 (99.35%), Query Frame = 0


Query: 1    MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSLASFKFKGGGSKSLPQVISAIRASKLL 60
            MLDFDVILGMDWLAANHASIDCSRKEVTFNPPS+ASFKFKGGGSKSLPQVISAIRASKLL
Sbjct: 708  MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLL 767

Query: 61   SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 120
            SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI
Sbjct: 768  SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 827

Query: 121  SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGALVLFVKKKDGSMRLCIDYRELNK 180
            SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGA VLFVKKKDGSMRLCIDYRELNK
Sbjct: 828  SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 887

Query: 181  VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIV 240
            VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIV
Sbjct: 888  VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIV 947

Query: 241  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNK 300
            MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNK
Sbjct: 948  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNK 1007

Query: 301  LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 360
            LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR
Sbjct: 1008 LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 1067

Query: 361  RFVENFSRIATPLTQLTRKGVPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSD 420
            RFVENFSRIATPLTQLTRKG PFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSD
Sbjct: 1068 RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSD 1127

Query: 421  ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF 480
            ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF
Sbjct: 1128 ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF 1187

Query: 481  TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 540
            TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
Sbjct: 1188 TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 1247

Query: 541  QAPLHRDLERAEIAVSVGAVTMQLAQLTLQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAV 600
            QAPLHRDLERAEIAVSVGAVTMQLAQLT+QPTLRQRIIDAQSNDPYLVEKRGLAEAGQ  
Sbjct: 1248 QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTA 1307

Query: 601  EFSLSSDGGLLFERRLCVP 620
            EFSLSSDGGLLFERRLCVP
Sbjct: 1308 EFSLSSDGGLLFERRLCVP 1326

[Close]

BLAST of Cmc10g0280491 vs. NCBI nr
Match: KAA0048687.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1222.2 bits (3161), Expect = 0.0e+00
Identity = 612/619 (98.87%), Postives = 615/619 (99.35%), Query Frame = 0


Query: 1    MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSLASFKFKGGGSKSLPQVISAIRASKLL 60
            MLDFDVILGMDWLAA+HASIDCSRKEVTFNPPS ASFKFKGGGS+SLPQVISAIRASKLL
Sbjct: 454  MLDFDVILGMDWLAAHHASIDCSRKEVTFNPPSRASFKFKGGGSRSLPQVISAIRASKLL 513

Query: 61   SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 120
            SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI
Sbjct: 514  SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 573

Query: 121  SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGALVLFVKKKDGSMRLCIDYRELNK 180
            SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGA VLFVKKKDGSMRLCIDYRELNK
Sbjct: 574  SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 633

Query: 181  VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIV 240
            VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIV
Sbjct: 634  VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIV 693

Query: 241  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNK 300
            MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNK
Sbjct: 694  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNK 753

Query: 301  LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 360
            LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR
Sbjct: 754  LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 813

Query: 361  RFVENFSRIATPLTQLTRKGVPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSD 420
            RFVENFSRIATPLTQLTRKG PFVWSKACEDSFQ LKQKLVTAPVLTVPDGSGSFVIYSD
Sbjct: 814  RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSD 873

Query: 421  ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF 480
            ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF
Sbjct: 874  ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF 933

Query: 481  TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 540
            TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
Sbjct: 934  TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 993

Query: 541  QAPLHRDLERAEIAVSVGAVTMQLAQLTLQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAV 600
            QAPLHRDLERAEIAVSVGAVTMQLAQLT+QPTLRQRIIDAQSNDPYLVEKRGLAEAGQAV
Sbjct: 994  QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAV 1053

Query: 601  EFSLSSDGGLLFERRLCVP 620
            EFSLSSDGGLLFERRLCVP
Sbjct: 1054 EFSLSSDGGLLFERRLCVP 1072

[Close]

BLAST of Cmc10g0280491 vs. NCBI nr
Match: KAA0037291.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1219.5 bits (3154), Expect = 0.0e+00
Identity = 610/619 (98.55%), Postives = 614/619 (99.19%), Query Frame = 0


Query: 1    MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSLASFKFKGGGSKSLPQVISAIRASKLL 60
            MLDFDVILGMDWLAANHASIDCSRKEVTFNPPS+ASFKFKGGGSKSLPQVISAIRASKLL
Sbjct: 621  MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLL 680

Query: 61   SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 120
            SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI
Sbjct: 681  SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 740

Query: 121  SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGALVLFVKKKDGSMRLCIDYRELNK 180
            SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGA VLFVKKKDGSMRLCIDYRELNK
Sbjct: 741  SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 800

Query: 181  VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIV 240
            VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIV
Sbjct: 801  VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIV 860

Query: 241  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNK 300
            MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNK
Sbjct: 861  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNK 920

Query: 301  LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 360
            LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKI+AVTGWTRPSTVSEVRSFLGLAGYYR
Sbjct: 921  LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIKAVTGWTRPSTVSEVRSFLGLAGYYR 980

Query: 361  RFVENFSRIATPLTQLTRKGVPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSD 420
            RFVENFSRIATPLTQLTRKGVPFVWSKACEDSFQ LKQKLVTAPVLTVPDGS SFVIYSD
Sbjct: 981  RFVENFSRIATPLTQLTRKGVPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSDSFVIYSD 1040

Query: 421  ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF 480
            ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF
Sbjct: 1041 ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF 1100

Query: 481  TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 540
            TDHKS KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK+SHSAALITR
Sbjct: 1101 TDHKSTKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKISHSAALITR 1160

Query: 541  QAPLHRDLERAEIAVSVGAVTMQLAQLTLQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAV 600
            QAPLHRDLER EIAVSVGAVTMQLAQLT+QPTLRQRIIDAQSNDPYLVEKRGLAEAGQAV
Sbjct: 1161 QAPLHRDLERDEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAV 1220

Query: 601  EFSLSSDGGLLFERRLCVP 620
            EFSLSSDGGLLFERRLCVP
Sbjct: 1221 EFSLSSDGGLLFERRLCVP 1239

[Close]

BLAST of Cmc10g0280491 vs. NCBI nr
Match: KAA0037244.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 1217.6 bits (3149), Expect = 0.0e+00
Identity = 609/619 (98.38%), Postives = 611/619 (98.71%), Query Frame = 0


Query: 1    MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSLASFKFKGGGSKSLPQVISAIRASKLL 60
            MLDFDVILGMDWLAANHASIDCSRKEVTFNPPS+ASFKFKGGGSKSLPQVISAIRASKLL
Sbjct: 488  MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLL 547

Query: 61   SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 120
            SQGTWGILASVVDTRE DVSLS EPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI
Sbjct: 548  SQGTWGILASVVDTREVDVSLSLEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 607

Query: 121  SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGALVLFVKKKDGSMRLCIDYRELNK 180
            SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGA VLFVKKKDGSMRLCIDYRELNK
Sbjct: 608  SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 667

Query: 181  VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIV 240
            VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIV
Sbjct: 668  VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIV 727

Query: 241  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNK 300
            MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTE EHEEHLRMVLQTLRDNK
Sbjct: 728  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEVEHEEHLRMVLQTLRDNK 787

Query: 301  LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 360
            LYAKF KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR
Sbjct: 788  LYAKFLKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 847

Query: 361  RFVENFSRIATPLTQLTRKGVPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSD 420
            RFVENFSRIATPLTQLTRKG PFVWSKACEDSFQ LKQKLVTAPVLTVPDGSGSFVIYSD
Sbjct: 848  RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSD 907

Query: 421  ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF 480
            ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF
Sbjct: 908  ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF 967

Query: 481  TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 540
            TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
Sbjct: 968  TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 1027

Query: 541  QAPLHRDLERAEIAVSVGAVTMQLAQLTLQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAV 600
            QAPLHRDLERAEIAVSVGAVTMQLAQLT+QPTLRQRIIDAQSNDPYLVEKRGLAE GQAV
Sbjct: 1028 QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEVGQAV 1087

Query: 601  EFSLSSDGGLLFERRLCVP 620
            EFSLSSDGGLLFERRLCVP
Sbjct: 1088 EFSLSSDGGLLFERRLCVP 1106

[Close]

BLAST of Cmc10g0280491 vs. NCBI nr
Match: KAA0059792.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1214.1 bits (3140), Expect = 0.0e+00
Identity = 605/619 (97.74%), Postives = 609/619 (98.38%), Query Frame = 0


Query: 1   MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSLASFKFKGGGSKSLPQVISAIRASKLL 60
           MLDFDVILGMDWLAANHASIDCSRKEVTFNPPS+A FKFKGGGSKSLPQVISAIR SKLL
Sbjct: 232 MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMAGFKFKGGGSKSLPQVISAIRTSKLL 291

Query: 61  SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 120
           SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI
Sbjct: 292 SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 351

Query: 121 SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGALVLFVKKKDGSMRLCIDYRELNK 180
           SRAPYRM PAELKELKVQLQELLDKGFIRPSVSPWGA VLFVKKKDGSMRLCIDYRELNK
Sbjct: 352 SRAPYRMGPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 411

Query: 181 VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIV 240
           VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEF+V
Sbjct: 412 VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFVV 471

Query: 241 MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNK 300
           MSFGLTNAP VFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLR VLQTLRDNK
Sbjct: 472 MSFGLTNAPTVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRKVLQTLRDNK 531

Query: 301 LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 360
           LYAKFSKCEFWLKQVSFLGHV+SK GVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR
Sbjct: 532 LYAKFSKCEFWLKQVSFLGHVISKVGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 591

Query: 361 RFVENFSRIATPLTQLTRKGVPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSD 420
           RFVENFSRIATPLTQLTRKG PFVWSKACEDSFQ LKQKLVTAPVLTVPDGSGSFVIYSD
Sbjct: 592 RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSD 651

Query: 421 ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF 480
           ASKKGLGCVLM QGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF
Sbjct: 652 ASKKGLGCVLMHQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF 711

Query: 481 TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 540
           TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
Sbjct: 712 TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 771

Query: 541 QAPLHRDLERAEIAVSVGAVTMQLAQLTLQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAV 600
           QAPLHRDLERAEIAVSVGAVTMQLAQLT+QPTLRQRIIDAQSNDPYLVEKRGLAEAGQAV
Sbjct: 772 QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAV 831

Query: 601 EFSLSSDGGLLFERRLCVP 620
           EFSLSSDGGLLFERRLCVP
Sbjct: 832 EFSLSSDGGLLFERRLCVP 850

[Close]

BLAST of Cmc10g0280491 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 326.2 bits (835), Expect = 7.8e-88
Identity = 166/411 (40.39%), Postives = 255/411 (62.04%), Query Frame = 0


Query: 125 YRMAPAELKELKVQLQELLDKGFIRPSVSPWGALVLFV-KKKDGS----MRLCIDYRELN 184
           Y    A  +E++ Q+Q++L++G IR S SP+ + +  V KK+D S     R+ IDYR+LN
Sbjct: 213 YSYPQAYEQEVESQIQDMLNQGIIRTSNSPYNSPIWVVPKKQDASGKQKFRIVIDYRKLN 272

Query: 185 KVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFI 244
           ++TV +R+P+P +D++  +L     F+ IDL  G+HQ+ +  E V KTAF +++GHYE++
Sbjct: 273 EITVGDRHPIPNMDEILGKLGRCNYFTTIDLAKGFHQIEMDPESVSKTAFSTKHGHYEYL 332

Query: 245 VMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDN 304
            M FGL NAPA F   MN + R  L+   +V++DDI+++S +  EH + L +V + L   
Sbjct: 333 RMPFGLKNAPATFQRCMNDILRPLLNKHCLVYLDDIIVFSTSLDEHLQSLGLVFEKLAKA 392

Query: 305 KLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYY 364
            L  +  KCEF  ++ +FLGHV++  G+  +P KIEA+  +  P+   E+++FLGL GYY
Sbjct: 393 NLKLQLDKCEFLKQETTFLGHVLTPDGIKPNPEKIEAIQKYPIPTKPKEIKAFLGLTGYY 452

Query: 365 RRFVENFSRIATPLTQLTRKGVPFVWSKACEDS-FQTLKQKLVTAPVLTVPDGSGSFVIY 424
           R+F+ NF+ IA P+T+  +K +    +    DS F+ LK  +   P+L VPD +  F + 
Sbjct: 453 RKFIPNFADIAKPMTKCLKKNMKIDTTNPEYDSAFKKLKYLISEDPILKVPDFTKKFTLT 512

Query: 425 SDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQ 484
           +DAS   LG VL Q G  ++Y SR L  HE NY T + EL A+V+A K +RHYL G   +
Sbjct: 513 TDASDVALGAVLSQDGHPLSYISRTLNEHEINYSTIEKELLAIVWATKTFRHYLLGRHFE 572

Query: 485 IFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSR 530
           I +DH+ L + +  K+ N +  RW   + ++D +I Y  GK N VADALSR
Sbjct: 573 ISSDHQPLSWLYRMKDPNSKLTRWRVKLSEFDFDIKYIKGKENCVADALSR 623

[Close]

BLAST of Cmc10g0280491 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 324.3 bits (830), Expect = 2.9e-87
Identity = 163/417 (39.09%), Postives = 249/417 (59.71%), Query Frame = 0


Query: 119 PISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGALVLFVKKKD-----GSMRLCI 178
           PI    Y +A     E++ Q+QE+L++G IR S SP+ +    V KK         R+ I
Sbjct: 206 PIYSKQYPLAQTHEIEVENQVQEMLNQGLIRESNSPYNSPTWVVPKKPDASGANKYRVVI 265

Query: 179 DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRY 238
           DYR+LN++T+ +RYP+P +D++  +L     F+ IDL  G+HQ+ + +E + KTAF ++ 
Sbjct: 266 DYRKLNEITIPDRYPIPNMDEILGKLGKCQYFTTIDLAKGFHQIEMDEESISKTAFSTKS 325

Query: 239 GHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVL 298
           GHYE++ M FGL NAPA F   MN + R  L+   +V++DDI+I+S +  EH   +++V 
Sbjct: 326 GHYEYLRMPFGLRNAPATFQRCMNNILRPLLNKHCLVYLDDIIIFSTSLTEHLNSIQLVF 385

Query: 299 QTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFL 358
             L D  L  +  KCEF  K+ +FLGH+V+  G+  +P K++A+  +  P+   E+R+FL
Sbjct: 386 TKLADANLKLQLDKCEFLKKEANFLGHIVTPDGIKPNPIKVKAIVSYPIPTKDKEIRAFL 445

Query: 359 GLAGYYRRFVENFSRIATPLTQLTRKGVPFVWSK-ACEDSFQTLKQKLVTAPVLTVPDGS 418
           GL GYYR+F+ N++ IA P+T   +K       K    ++F+ LK  ++  P+L +PD  
Sbjct: 446 GLTGYYRKFIPNYADIAKPMTSCLKKRTKIDTQKLEYIEAFEKLKALIIRDPILQLPDFE 505

Query: 419 GSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYL 478
             FV+ +DAS   LG VL Q G  +++ SR L  HE NY   + EL A+V+A K +RHYL
Sbjct: 506 KKFVLTTDASNLALGAVLSQNGHPISFISRTLNDHELNYSAIEKELLAIVWATKTFRHYL 565

Query: 479 YGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSR 530
            G +  I +DH+ L++    KE   +  RW   + +Y  +I Y  GK N VADALSR
Sbjct: 566 LGRQFLIASDHQPLRWLHNLKEPGAKLERWRVRLSEYQFKIDYIKGKENSVADALSR 622

[Close]

BLAST of Cmc10g0280491 vs. ExPASy Swiss-Prot
Match: Q8I7P9 (Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 1.5e-83
Identity = 168/465 (36.13%), Postives = 267/465 (57.42%), Query Frame = 0


Query: 89  DYPDVFPEELPGLPPHREVEFAIELEPGT---VPISRAPYRMAPAELKELKVQLQELLDK 148
           ++P +F   L G+     VE A++ E  T    PI    Y        E++ Q+ ELL  
Sbjct: 94  EFPRIFEPPLSGM----SVETAVKAEIRTNTQDPIYAKSYPYPVNMRGEVERQIDELLQD 153

Query: 149 GFIRPSVSPWGALVLFVKKK-----DGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQ 208
           G IRPS SP+ + +  V KK     +   R+ +D++ LN VT+ + YP+P I+     L 
Sbjct: 154 GIIRPSNSPYNSPIWIVPKKPKPNGEKQYRMVVDFKRLNTVTIPDTYPIPDINATLASLG 213

Query: 209 GATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVF 268
            A  F+ +DL SG+HQ+ +K+ D+PKTAF +  G YEF+ + FGL NAPA+F  +++ + 
Sbjct: 214 NAKYFTTLDLTSGFHQIHMKESDIPKTAFSTLNGKYEFLRLPFGLKNAPAIFQRMIDDIL 273

Query: 269 REFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGH 328
           RE +     V+IDDI+++S+    H ++LR+VL +L    L     K  F   QV FLG+
Sbjct: 274 REHIGKVCYVYIDDIIVFSEDYDTHWKNLRLVLASLSKANLQVNLEKSHFLDTQVEFLGY 333

Query: 329 VVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTR-- 388
           +V+  G+  DP K+ A++    P++V E++ FLG+  YYR+F+++++++A PLT LTR  
Sbjct: 334 IVTADGIKADPKKVRAISEMPPPTSVKELKRFLGMTSYYRKFIQDYAKVAKPLTNLTRGL 393

Query: 389 ---------KGVPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCV 448
                      VP    +    SF  LK  L ++ +L  P  +  F + +DAS   +G V
Sbjct: 394 YANIKSSQSSKVPITLDETALQSFNDLKSILCSSEILAFPCFTKPFHLTTDASNWAIGAV 453

Query: 449 LMQ----QGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGE-KIQIFTDHK 508
           L Q    + + +AY SR L   E+NY T + E+ A++++L   R YLYG   I+++TDH+
Sbjct: 454 LSQDDQGRDRPIAYISRSLNKTEENYATIEKEMLAIIWSLDNLRAYLYGAGTIKVYTDHQ 513

Query: 509 SLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSR 530
            L +    +  N + +RW   +++Y+CE++Y PGK+NVVADALSR
Sbjct: 514 PLTFALGNRNFNAKLKRWKARIEEYNCELIYKPGKSNVVADALSR 554

[Close]

BLAST of Cmc10g0280491 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 304.3 bits (778), Expect = 3.2e-81
Identity = 177/529 (33.46%), Postives = 289/529 (54.63%), Query Frame = 0


Query: 96  EELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPW 155
           E+LP   P + +EF +EL      +    Y + P +++ +  ++ + L  G IR S +  
Sbjct: 391 EKLP--KPIKGLEFEVELTQENYRLPIRNYPLPPGKMQAMNDEINQGLKSGIIRESKAIN 450

Query: 156 GALVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYH 215
              V+FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH
Sbjct: 451 ACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYH 510

Query: 216 QLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDI 275
            +R++  D  K AFR   G +E++VM +G++ APA F   +N +  E  ++ V+ ++DDI
Sbjct: 511 LIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDI 570

Query: 276 LIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIE 335
           LI+SK+E+EH +H++ VLQ L++  L    +KCEF   QV F+G+ +S+ G +     I+
Sbjct: 571 LIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENID 630

Query: 336 AVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGVPFVWSKACEDSFQT 395
            V  W +P    E+R FLG   Y R+F+   S++  PL  L +K V + W+     + + 
Sbjct: 631 KVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIEN 690

Query: 396 LKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQN 455
           +KQ LV+ PVL   D S   ++ +DAS   +G VL Q+        V Y S ++   + N
Sbjct: 691 IKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLN 750

Query: 456 YPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELV 515
           Y   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   +
Sbjct: 751 YSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFL 810

Query: 516 KDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQ 575
           +D++ EI Y PG AN +ADALSR       ++    P+ +D E   I          + Q
Sbjct: 811 QDFNFEINYRPGSANHIADALSR-------IVDETEPIPKDSEDNSINF--------VNQ 870

Query: 576 LTLQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR 616
           +++    + +++   +ND  L+    L    + VE ++    GLL   +
Sbjct: 871 ISITDDFKNQVVTEYTNDTKLLNL--LNNEDKRVEENIQLKDGLLINSK 900

[Close]

BLAST of Cmc10g0280491 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 304.3 bits (778), Expect = 3.2e-81
Identity = 177/529 (33.46%), Postives = 289/529 (54.63%), Query Frame = 0


Query: 96  EELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPW 155
           E+LP   P + +EF +EL      +    Y + P +++ +  ++ + L  G IR S +  
Sbjct: 391 EKLP--KPIKGLEFEVELTQENYRLPIRNYPLPPGKMQAMNDEINQGLKSGIIRESKAIN 450

Query: 156 GALVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYH 215
              V+FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH
Sbjct: 451 ACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYH 510

Query: 216 QLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDI 275
            +R++  D  K AFR   G +E++VM +G++ APA F   +N +  E  ++ V+ ++DDI
Sbjct: 511 LIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDI 570

Query: 276 LIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIE 335
           LI+SK+E+EH +H++ VLQ L++  L    +KCEF   QV F+G+ +S+ G +     I+
Sbjct: 571 LIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENID 630

Query: 336 AVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGVPFVWSKACEDSFQT 395
            V  W +P    E+R FLG   Y R+F+   S++  PL  L +K V + W+     + + 
Sbjct: 631 KVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIEN 690

Query: 396 LKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQN 455
           +KQ LV+ PVL   D S   ++ +DAS   +G VL Q+        V Y S ++   + N
Sbjct: 691 IKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLN 750

Query: 456 YPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELV 515
           Y   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   +
Sbjct: 751 YSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFL 810

Query: 516 KDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQ 575
           +D++ EI Y PG AN +ADALSR       ++    P+ +D E   I          + Q
Sbjct: 811 QDFNFEINYRPGSANHIADALSR-------IVDETEPIPKDSEDNSINF--------VNQ 870

Query: 576 LTLQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR 616
           +++    + +++   +ND  L+    L    + VE ++    GLL   +
Sbjct: 871 ISITDDFKNQVVTEYTNDTKLLNL--LNNEDKRVEENIQLKDGLLINSK 900

[Close]

BLAST of Cmc10g0280491 vs. ExPASy TrEMBL
Match: A0A5D3BPI1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G002120 PE=4 SV=1)

HSP 1 Score: 1225.7 bits (3170), Expect = 0.0e+00
Identity = 613/619 (99.03%), Postives = 615/619 (99.35%), Query Frame = 0


Query: 1    MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSLASFKFKGGGSKSLPQVISAIRASKLL 60
            MLDFDVILGMDWLAANHASIDCSRKEVTFNPPS+ASFKFKGGGSKSLPQVISAIRASKLL
Sbjct: 708  MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLL 767

Query: 61   SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 120
            SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI
Sbjct: 768  SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 827

Query: 121  SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGALVLFVKKKDGSMRLCIDYRELNK 180
            SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGA VLFVKKKDGSMRLCIDYRELNK
Sbjct: 828  SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 887

Query: 181  VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIV 240
            VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIV
Sbjct: 888  VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIV 947

Query: 241  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNK 300
            MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNK
Sbjct: 948  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNK 1007

Query: 301  LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 360
            LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR
Sbjct: 1008 LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 1067

Query: 361  RFVENFSRIATPLTQLTRKGVPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSD 420
            RFVENFSRIATPLTQLTRKG PFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSD
Sbjct: 1068 RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSD 1127

Query: 421  ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF 480
            ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF
Sbjct: 1128 ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF 1187

Query: 481  TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 540
            TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
Sbjct: 1188 TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 1247

Query: 541  QAPLHRDLERAEIAVSVGAVTMQLAQLTLQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAV 600
            QAPLHRDLERAEIAVSVGAVTMQLAQLT+QPTLRQRIIDAQSNDPYLVEKRGLAEAGQ  
Sbjct: 1248 QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTA 1307

Query: 601  EFSLSSDGGLLFERRLCVP 620
            EFSLSSDGGLLFERRLCVP
Sbjct: 1308 EFSLSSDGGLLFERRLCVP 1326

[Close]

BLAST of Cmc10g0280491 vs. ExPASy TrEMBL
Match: A0A5A7U330 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold4358G00040 PE=4 SV=1)

HSP 1 Score: 1222.2 bits (3161), Expect = 0.0e+00
Identity = 612/619 (98.87%), Postives = 615/619 (99.35%), Query Frame = 0


Query: 1    MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSLASFKFKGGGSKSLPQVISAIRASKLL 60
            MLDFDVILGMDWLAA+HASIDCSRKEVTFNPPS ASFKFKGGGS+SLPQVISAIRASKLL
Sbjct: 454  MLDFDVILGMDWLAAHHASIDCSRKEVTFNPPSRASFKFKGGGSRSLPQVISAIRASKLL 513

Query: 61   SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 120
            SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI
Sbjct: 514  SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 573

Query: 121  SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGALVLFVKKKDGSMRLCIDYRELNK 180
            SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGA VLFVKKKDGSMRLCIDYRELNK
Sbjct: 574  SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 633

Query: 181  VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIV 240
            VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIV
Sbjct: 634  VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIV 693

Query: 241  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNK 300
            MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNK
Sbjct: 694  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNK 753

Query: 301  LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 360
            LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR
Sbjct: 754  LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 813

Query: 361  RFVENFSRIATPLTQLTRKGVPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSD 420
            RFVENFSRIATPLTQLTRKG PFVWSKACEDSFQ LKQKLVTAPVLTVPDGSGSFVIYSD
Sbjct: 814  RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSD 873

Query: 421  ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF 480
            ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF
Sbjct: 874  ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF 933

Query: 481  TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 540
            TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
Sbjct: 934  TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 993

Query: 541  QAPLHRDLERAEIAVSVGAVTMQLAQLTLQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAV 600
            QAPLHRDLERAEIAVSVGAVTMQLAQLT+QPTLRQRIIDAQSNDPYLVEKRGLAEAGQAV
Sbjct: 994  QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAV 1053

Query: 601  EFSLSSDGGLLFERRLCVP 620
            EFSLSSDGGLLFERRLCVP
Sbjct: 1054 EFSLSSDGGLLFERRLCVP 1072

[Close]

BLAST of Cmc10g0280491 vs. ExPASy TrEMBL
Match: A0A5A7T6R9 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold3G00010 PE=4 SV=1)

HSP 1 Score: 1219.5 bits (3154), Expect = 0.0e+00
Identity = 610/619 (98.55%), Postives = 614/619 (99.19%), Query Frame = 0


Query: 1    MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSLASFKFKGGGSKSLPQVISAIRASKLL 60
            MLDFDVILGMDWLAANHASIDCSRKEVTFNPPS+ASFKFKGGGSKSLPQVISAIRASKLL
Sbjct: 621  MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLL 680

Query: 61   SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 120
            SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI
Sbjct: 681  SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 740

Query: 121  SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGALVLFVKKKDGSMRLCIDYRELNK 180
            SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGA VLFVKKKDGSMRLCIDYRELNK
Sbjct: 741  SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 800

Query: 181  VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIV 240
            VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIV
Sbjct: 801  VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIV 860

Query: 241  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNK 300
            MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNK
Sbjct: 861  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNK 920

Query: 301  LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 360
            LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKI+AVTGWTRPSTVSEVRSFLGLAGYYR
Sbjct: 921  LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIKAVTGWTRPSTVSEVRSFLGLAGYYR 980

Query: 361  RFVENFSRIATPLTQLTRKGVPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSD 420
            RFVENFSRIATPLTQLTRKGVPFVWSKACEDSFQ LKQKLVTAPVLTVPDGS SFVIYSD
Sbjct: 981  RFVENFSRIATPLTQLTRKGVPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSDSFVIYSD 1040

Query: 421  ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF 480
            ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF
Sbjct: 1041 ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF 1100

Query: 481  TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 540
            TDHKS KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRK+SHSAALITR
Sbjct: 1101 TDHKSTKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKISHSAALITR 1160

Query: 541  QAPLHRDLERAEIAVSVGAVTMQLAQLTLQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAV 600
            QAPLHRDLER EIAVSVGAVTMQLAQLT+QPTLRQRIIDAQSNDPYLVEKRGLAEAGQAV
Sbjct: 1161 QAPLHRDLERDEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAV 1220

Query: 601  EFSLSSDGGLLFERRLCVP 620
            EFSLSSDGGLLFERRLCVP
Sbjct: 1221 EFSLSSDGGLLFERRLCVP 1239

[Close]

BLAST of Cmc10g0280491 vs. ExPASy TrEMBL
Match: A0A5A7T190 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold379G001700 PE=4 SV=1)

HSP 1 Score: 1217.6 bits (3149), Expect = 0.0e+00
Identity = 609/619 (98.38%), Postives = 611/619 (98.71%), Query Frame = 0


Query: 1    MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSLASFKFKGGGSKSLPQVISAIRASKLL 60
            MLDFDVILGMDWLAANHASIDCSRKEVTFNPPS+ASFKFKGGGSKSLPQVISAIRASKLL
Sbjct: 488  MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLL 547

Query: 61   SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 120
            SQGTWGILASVVDTRE DVSLS EPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI
Sbjct: 548  SQGTWGILASVVDTREVDVSLSLEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 607

Query: 121  SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGALVLFVKKKDGSMRLCIDYRELNK 180
            SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGA VLFVKKKDGSMRLCIDYRELNK
Sbjct: 608  SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 667

Query: 181  VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIV 240
            VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIV
Sbjct: 668  VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIV 727

Query: 241  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNK 300
            MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTE EHEEHLRMVLQTLRDNK
Sbjct: 728  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEVEHEEHLRMVLQTLRDNK 787

Query: 301  LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 360
            LYAKF KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR
Sbjct: 788  LYAKFLKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 847

Query: 361  RFVENFSRIATPLTQLTRKGVPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSD 420
            RFVENFSRIATPLTQLTRKG PFVWSKACEDSFQ LKQKLVTAPVLTVPDGSGSFVIYSD
Sbjct: 848  RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSD 907

Query: 421  ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF 480
            ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF
Sbjct: 908  ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF 967

Query: 481  TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 540
            TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
Sbjct: 968  TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 1027

Query: 541  QAPLHRDLERAEIAVSVGAVTMQLAQLTLQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAV 600
            QAPLHRDLERAEIAVSVGAVTMQLAQLT+QPTLRQRIIDAQSNDPYLVEKRGLAE GQAV
Sbjct: 1028 QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEVGQAV 1087

Query: 601  EFSLSSDGGLLFERRLCVP 620
            EFSLSSDGGLLFERRLCVP
Sbjct: 1088 EFSLSSDGGLLFERRLCVP 1106

[Close]

BLAST of Cmc10g0280491 vs. ExPASy TrEMBL
Match: A0A5A7UV42 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold108G00570 PE=4 SV=1)

HSP 1 Score: 1214.1 bits (3140), Expect = 0.0e+00
Identity = 605/619 (97.74%), Postives = 609/619 (98.38%), Query Frame = 0


Query: 1   MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSLASFKFKGGGSKSLPQVISAIRASKLL 60
           MLDFDVILGMDWLAANHASIDCSRKEVTFNPPS+A FKFKGGGSKSLPQVISAIR SKLL
Sbjct: 232 MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMAGFKFKGGGSKSLPQVISAIRTSKLL 291

Query: 61  SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 120
           SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI
Sbjct: 292 SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 351

Query: 121 SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGALVLFVKKKDGSMRLCIDYRELNK 180
           SRAPYRM PAELKELKVQLQELLDKGFIRPSVSPWGA VLFVKKKDGSMRLCIDYRELNK
Sbjct: 352 SRAPYRMGPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 411

Query: 181 VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIV 240
           VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEF+V
Sbjct: 412 VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFVV 471

Query: 241 MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNK 300
           MSFGLTNAP VFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLR VLQTLRDNK
Sbjct: 472 MSFGLTNAPTVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRKVLQTLRDNK 531

Query: 301 LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 360
           LYAKFSKCEFWLKQVSFLGHV+SK GVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR
Sbjct: 532 LYAKFSKCEFWLKQVSFLGHVISKVGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 591

Query: 361 RFVENFSRIATPLTQLTRKGVPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSD 420
           RFVENFSRIATPLTQLTRKG PFVWSKACEDSFQ LKQKLVTAPVLTVPDGSGSFVIYSD
Sbjct: 592 RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSD 651

Query: 421 ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF 480
           ASKKGLGCVLM QGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF
Sbjct: 652 ASKKGLGCVLMHQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF 711

Query: 481 TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 540
           TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR
Sbjct: 712 TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 771

Query: 541 QAPLHRDLERAEIAVSVGAVTMQLAQLTLQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAV 600
           QAPLHRDLERAEIAVSVGAVTMQLAQLT+QPTLRQRIIDAQSNDPYLVEKRGLAEAGQAV
Sbjct: 772 QAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAV 831

Query: 601 EFSLSSDGGLLFERRLCVP 620
           EFSLSSDGGLLFERRLCVP
Sbjct: 832 EFSLSSDGGLLFERRLCVP 850

[Close]

BLAST of Cmc10g0280491 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 122.1 bits (305), Expect = 1.6e-27
Identity = 60/131 (45.80%), Postives = 82/131 (62.60%), Query Frame = 0


Query: 288 HLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLG--HVVSKAGVSVDPAKIEAVTGWTRPST 347
           HL MVLQ    ++ YA   KC F   Q+++LG  H++S  GVS DPAK+EA+ GW  P  
Sbjct: 3   HLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEPKN 62

Query: 348 VSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGVPFVWSKACEDSFQTLKQKLVTAPV 407
            +E+R FLGL GYYRRFV+N+ +I  PLT+L +K     W++    +F+ LK  + T PV
Sbjct: 63  TTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKKN-SLKWTEMAALAFKALKGAVTTLPV 122

Query: 408 LTVPDGSGSFV 417
           L +PD    FV
Sbjct: 123 LALPDLKLPFV 132

The following BLAST results are available for this feature:

BLAST of Cmc10g0280491 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK01613.1	0.0e+00	99.03	pol protein [Cucumis melo var. makuwa]	[more]
KAA0048687.1	0.0e+00	98.87	pol protein [Cucumis melo var. makuwa]	[more]
KAA0037291.1	0.0e+00	98.55	pol protein [Cucumis melo var. makuwa]	[more]
KAA0037244.1	0.0e+00	98.38	reverse transcriptase [Cucumis melo var. makuwa]	[more]
KAA0059792.1	0.0e+00	97.74	pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc10g0280491 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P04323	7.8e-88	40.39	Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogast...	[more]
P20825	2.9e-87	39.09	Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste...	[more]
Q8I7P9	1.5e-83	36.13	Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogast...	[more]
P0CT41	3.2e-81	33.46	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	3.2e-81	33.46	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Cmc10g0280491 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BPI1	0.0e+00	99.03	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold45...	[more]
A0A5A7U330	0.0e+00	98.87	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43...	[more]
A0A5A7T6R9	0.0e+00	98.55	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold3G...	[more]
A0A5A7T190	0.0e+00	98.38	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold37...	[more]
A0A5A7UV42	0.0e+00	97.74	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold10...	[more]

BLAST of Cmc10g0280491 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00860.1	1.6e-27	45.80	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 187..322 e-value: 6.7E-94 score: 315.1
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 332..422 e-value: 6.4E-31 score: 108.2
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 162..321 e-value: 2.7E-29 score: 102.3
IPR000477	Reverse transcriptase domain	PROSITE	PS50878	RT_POL	coord: 143..322 score: 11.028012
IPR041373	Reverse transcriptase, RNase H-like domain	PFAM	PF17917	RT_RNaseH	coord: 413..509 e-value: 2.2E-34 score: 117.9
IPR021109	Aspartic peptidase domain superfamily	GENE3D	2.40.70.10	Acid Proteases	coord: 1..37 e-value: 3.8E-6 score: 28.6
None	No IPR available	PFAM	PF08284	RVP_2	coord: 2..31 e-value: 9.9E-9 score: 35.1
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 108..247 e-value: 6.7E-94 score: 315.1
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 1..536
None	No IPR available	PANTHER	PTHR24559:SF383	DNA/RNA POLYMERASES SUPERFAMILY PROTEIN	coord: 1..536
None	No IPR available	CDD	cd01647	RT_LTR	coord: 146..322 e-value: 9.57364E-97 score: 291.807
None	No IPR available	CDD	cd09274	RNase_HI_RT_Ty3	coord: 416..531 e-value: 1.36204E-59 score: 193.093
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 86..515

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc10g0280491.1	Cmc10g0280491.1	mRNA