Cmc10g0280411 (gene) Melon (Charmono) v1.1

Overview
NameCmc10g0280411
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionGag/pol protein
LocationCMiso1.1chr10: 18153797 .. 18154699 (+)
RNA-Seq ExpressionCmc10g0280411
SyntenyCmc10g0280411
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTCCAACCAGAGGGGTTTATACAAAATGGTCAAGAACAAAAAGTTTGTAAGCTTCAAAAATCCATATATGGATTAAAACAAGCATCTAGATCCTGGAATATAAGATTTGATACTGTGATCAAATCTTATGGTTTTGAACAAAATGTTGATGAACCTTGTGTTTACAAAAGGATCATCAATTCTATTGTAGCATTCTTAGTTCTGTATGTAGATGACATTCTACTTATTGAGAATGATGTAGGTCATCTAACTGATATTAAGAAATGGCTAGCTACGCAATTCCAAATGAAAGATTTGGGAAATGCACAATACGTTATTGGTATCCAAATAGTTCGGAACCGAAAGAACAAAACACTAGCCATGTCTCAAACATCTTATATAGACAAAATGTTGTCAAGATATAAGATGCAGAATTCCAAAAAAGGCCTGTTGCCGTACAGATATGGAATTCATTTATCAAAAGAACAATGTCCAAAAACACCTCAAGAAGTTGAGGATATGAGTAACATTCCATATGTTTCTGTTGTTGGGAGCCTGATGTATGCAATGTTATGTACAAGACCTTACATTTGTTATTTAGTAGGGATAGTTAGTAGATATCAGTCCAATTCTGGACATGATCATTGGACAACCGTTAAGAATATTTTAAAATATCTTAGAAGAACAAAAGACTACATGCTTGTGTATGGTTCAAAGGATCTAATCCTTACTGGACACAGTGACTCTGATTTTCAAACTGATAAAGATGCTAGAAAGTCTACATCAAGATCGGTTTTCACTCTAAATGGAGGAGCAGTAGTGTGGAGAAGCATAAAGCAATCATGTATTGTCGACTCCACTATGGAAGCTGAATATGTAGCTGCGCAGAAAAAGAAGCAGTATGGCTTAAAAAGTTCTTAA

mRNA sequence

ATGGTCCAACCAGAGGGGTTTATACAAAATGGTCAAGAACAAAAAGTTTGTAAGCTTCAAAAATCCATATATGGATTAAAACAAGCATCTAGATCCTGGAATATAAGATTTGATACTGTGATCAAATCTTATGGTTTTGAACAAAATGTTGATGAACCTTGTGTTTACAAAAGGATCATCAATTCTATTGTAGCATTCTTAGTTCTGTATGTAGATGACATTCTACTTATTGAGAATGATGTAGGTCATCTAACTGATATTAAGAAATGGCTAGCTACGCAATTCCAAATGAAAGATTTGGGAAATGCACAATACGTTATTGGTATCCAAATAGTTCGGAACCGAAAGAACAAAACACTAGCCATGTCTCAAACATCTTATATAGACAAAATGTTGTCAAGATATAAGATGCAGAATTCCAAAAAAGGCCTGTTGCCGTACAGATATGGAATTCATTTATCAAAAGAACAATGTCCAAAAACACCTCAAGAAGTTGAGGATATGAGTAACATTCCATATGTTTCTGTTGTTGGGAGCCTGATGTATGCAATGTTATGTACAAGACCTTACATTTGTTATTTAGTAGGGATAGTTAGTAGATATCAGTCCAATTCTGGACATGATCATTGGACAACCGTTAAGAATATTTTAAAATATCTTAGAAGAACAAAAGACTACATGCTTGTGTATGGTTCAAAGGATCTAATCCTTACTGGACACAGTGACTCTGATTTTCAAACTGATAAAGATGCTAGAAAGTCTACATCAAGATCGGTTTTCACTCTAAATGGAGGAGCAGTAGTGTGGAGAAGCATAAAGCAATCATGTATTGTCGACTCCACTATGGAAGCTGAATATGTAGCTGCGCAGAAAAAGAAGCAGTATGGCTTAAAAAGTTCTTAA

Coding sequence (CDS)

ATGGTCCAACCAGAGGGGTTTATACAAAATGGTCAAGAACAAAAAGTTTGTAAGCTTCAAAAATCCATATATGGATTAAAACAAGCATCTAGATCCTGGAATATAAGATTTGATACTGTGATCAAATCTTATGGTTTTGAACAAAATGTTGATGAACCTTGTGTTTACAAAAGGATCATCAATTCTATTGTAGCATTCTTAGTTCTGTATGTAGATGACATTCTACTTATTGAGAATGATGTAGGTCATCTAACTGATATTAAGAAATGGCTAGCTACGCAATTCCAAATGAAAGATTTGGGAAATGCACAATACGTTATTGGTATCCAAATAGTTCGGAACCGAAAGAACAAAACACTAGCCATGTCTCAAACATCTTATATAGACAAAATGTTGTCAAGATATAAGATGCAGAATTCCAAAAAAGGCCTGTTGCCGTACAGATATGGAATTCATTTATCAAAAGAACAATGTCCAAAAACACCTCAAGAAGTTGAGGATATGAGTAACATTCCATATGTTTCTGTTGTTGGGAGCCTGATGTATGCAATGTTATGTACAAGACCTTACATTTGTTATTTAGTAGGGATAGTTAGTAGATATCAGTCCAATTCTGGACATGATCATTGGACAACCGTTAAGAATATTTTAAAATATCTTAGAAGAACAAAAGACTACATGCTTGTGTATGGTTCAAAGGATCTAATCCTTACTGGACACAGTGACTCTGATTTTCAAACTGATAAAGATGCTAGAAAGTCTACATCAAGATCGGTTTTCACTCTAAATGGAGGAGCAGTAGTGTGGAGAAGCATAAAGCAATCATGTATTGTCGACTCCACTATGGAAGCTGAATATGTAGCTGCGCAGAAAAAGAAGCAGTATGGCTTAAAAAGTTCTTAA

Protein sequence

MVQPEGFIQNGQEQKVCKLQKSIYGLKQASRSWNIRFDTVIKSYGFEQNVDEPCVYKRIINSIVAFLVLYVDDILLIENDVGHLTDIKKWLATQFQMKDLGNAQYVIGIQIVRNRKNKTLAMSQTSYIDKMLSRYKMQNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYVSVVGSLMYAMLCTRPYICYLVGIVSRYQSNSGHDHWTTVKNILKYLRRTKDYMLVYGSKDLILTGHSDSDFQTDKDARKSTSRSVFTLNGGAVVWRSIKQSCIVDSTMEAEYVAAQKKKQYGLKSS
Homology
BLAST of Cmc10g0280411 vs. NCBI nr
Match: TYK11050.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 523.1 bits (1346), Expect = 1.6e-144
Identity = 257/289 (88.93%), Postives = 270/289 (93.43%), Query Frame = 0

Query: 1   MVQPEGFIQNGQEQKVCKLQKSIYGLKQASRSWNIRFDTVIKSYGFEQNVDEPCVYKRII 60
           MVQPEGFIQ GQEQKVCKL+KSIYGLKQ +RSWNIRFDT IKSYGFEQNVDEPCVYKR I
Sbjct: 1   MVQPEGFIQKGQEQKVCKLKKSIYGLKQVARSWNIRFDTAIKSYGFEQNVDEPCVYKRFI 60

Query: 61  NSIVAFLVLYVDDILLIENDVGHLTDIKKWLATQFQMKDLGNAQYVIGIQIVRNRKNKTL 120
           N+ VAFL+LYVDDILLI NDVGHLTDIK+WLATQFQMKDLGNAQYV+GIQIVRN KNKTL
Sbjct: 61  NATVAFLLLYVDDILLIGNDVGHLTDIKEWLATQFQMKDLGNAQYVLGIQIVRNGKNKTL 120

Query: 121 AMSQTSYIDKMLSRYKMQNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYVSVVGSL 180
           AMSQTSYIDKMLSRYKMQNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPY S +GSL
Sbjct: 121 AMSQTSYIDKMLSRYKMQNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASAIGSL 180

Query: 181 MYAMLCTRPYICYLVGIVSRYQSNSGHDHWTTVKNILKYLRRTKDYMLVYGSKDLILTGH 240
           MYAMLCTR  ICY VGIV+RYQSN G DHWT VKNILKYLRRTKDYMLVYGSKDLILTG+
Sbjct: 181 MYAMLCTRVDICYSVGIVNRYQSNPGRDHWTAVKNILKYLRRTKDYMLVYGSKDLILTGY 240

Query: 241 SDSDFQTDKDARKSTSRSVFTLNGGAVVWRSIKQSCIVDSTMEAEYVAA 290
           +DSDFQTDKDARKSTS S+FTLN GAVVW+SIKQSCI  STMEA+YVAA
Sbjct: 241 TDSDFQTDKDARKSTSGSIFTLNEGAVVWKSIKQSCIAHSTMEAKYVAA 289

BLAST of Cmc10g0280411 vs. NCBI nr
Match: TYK03644.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 515.4 bits (1326), Expect = 3.3e-142
Identity = 257/288 (89.24%), Postives = 264/288 (91.67%), Query Frame = 0

Query: 1   MVQPEGFIQNGQEQKVCKLQKSIYGLKQASRSWNIRFDTVIKSYGFEQNVDEPCVYKRII 60
           MVQPE FIQ GQEQK+CKLQKSIYGLKQASRS NIRFDT IKSYG EQNVDEPCVYKRI+
Sbjct: 356 MVQPERFIQKGQEQKICKLQKSIYGLKQASRSCNIRFDTAIKSYGLEQNVDEPCVYKRIM 415

Query: 61  NSIVAFLVLYVDDILLIENDVGHLTDIKKWLATQFQMKDLGNAQYVIGIQIVRNRKNKTL 120
           NS VAFLVLYVDDILLI NDVGHL DIKKWLA QFQMKDLGNAQYV+G+QIVRNRKNKTL
Sbjct: 416 NSTVAFLVLYVDDILLIGNDVGHLADIKKWLAMQFQMKDLGNAQYVLGVQIVRNRKNKTL 475

Query: 121 AMSQTSYIDKMLSRYKMQNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYVSVVGSL 180
           AMSQTSYIDKMLSRYKM NSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPY S VGSL
Sbjct: 476 AMSQTSYIDKMLSRYKMHNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASAVGSL 535

Query: 181 MYAMLCTRPYICYLVGIVSRYQSNSGHDHWTTVKNILKYLRRTKDYMLVYGSKDLILTGH 240
           MY MLCTRP ICY VGIVSR QS  G DHWTTVKNILKYLRRTKDYMLVYGSKDLILTG+
Sbjct: 536 MYVMLCTRPNICYSVGIVSRCQSKPGRDHWTTVKNILKYLRRTKDYMLVYGSKDLILTGY 595

Query: 241 SDSDFQTDKDARKSTSRSVFTLNGGAVVWRSIKQSCIVDSTMEAEYVA 289
           +D  FQTDKDARKSTS  VFT+NGGAVVWRSIKQSCI DSTMEAEYVA
Sbjct: 596 TDFYFQTDKDARKSTSGLVFTMNGGAVVWRSIKQSCIADSTMEAEYVA 643

BLAST of Cmc10g0280411 vs. NCBI nr
Match: ADJ18449.1 (gag/pol protein, partial [Bryonia dioica])

HSP 1 Score: 513.8 bits (1322), Expect = 9.7e-142
Identity = 250/289 (86.51%), Postives = 269/289 (93.08%), Query Frame = 0

Query: 1    MVQPEGFIQNGQEQKVCKLQKSIYGLKQASRSWNIRFDTVIKSYGFEQNVDEPCVYKRII 60
            MVQPEGFI   QEQKVCKLQKSIYGLKQASRSWNIRFDT IKSYGFEQNVDEPCVYK+I+
Sbjct: 932  MVQPEGFIAQDQEQKVCKLQKSIYGLKQASRSWNIRFDTAIKSYGFEQNVDEPCVYKKIV 991

Query: 61   NSIVAFLVLYVDDILLIENDVGHLTDIKKWLATQFQMKDLGNAQYVIGIQIVRNRKNKTL 120
            NS+VAFL+LYVDDILLI NDV +LTD+KKWL TQFQMKDLG AQY++GIQIVRNRKNKTL
Sbjct: 992  NSVVAFLILYVDDILLIGNDVEYLTDVKKWLNTQFQMKDLGEAQYILGIQIVRNRKNKTL 1051

Query: 121  AMSQTSYIDKMLSRYKMQNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYVSVVGSL 180
            AMSQ SYIDK+LSRYKMQNSKKG LP+R+GIHLSKEQCPKTPQEVEDM NIPY S VGSL
Sbjct: 1052 AMSQASYIDKVLSRYKMQNSKKGQLPFRHGIHLSKEQCPKTPQEVEDMRNIPYSSAVGSL 1111

Query: 181  MYAMLCTRPYICYLVGIVSRYQSNSGHDHWTTVKNILKYLRRTKDYMLVYGSKDLILTGH 240
            MYAMLCTRP ICY VGIVSRYQSN G DHWT VKNILKYLRRT++YMLVYG+KDLILTG+
Sbjct: 1112 MYAMLCTRPDICYSVGIVSRYQSNPGRDHWTAVKNILKYLRRTRNYMLVYGAKDLILTGY 1171

Query: 241  SDSDFQTDKDARKSTSRSVFTLNGGAVVWRSIKQSCIVDSTMEAEYVAA 290
            +DSDFQ+DKDARKSTS SVFTLNGGAVVWRS+KQ+CI DSTMEAEYVAA
Sbjct: 1172 TDSDFQSDKDARKSTSGSVFTLNGGAVVWRSVKQTCIADSTMEAEYVAA 1220

BLAST of Cmc10g0280411 vs. NCBI nr
Match: KAA0063026.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 498.0 bits (1281), Expect = 5.5e-137
Identity = 252/309 (81.55%), Postives = 264/309 (85.44%), Query Frame = 0

Query: 1   MVQPEGFIQNGQEQKVCKLQKSIYGLKQASRSWNIRFDTVIKSYGFEQNVDEPCVYKRII 60
           MVQPEG IQ GQEQKVCKLQKSIYGLKQASRSWNIRFD  IKSYGF+QNV+EPCVYKRI 
Sbjct: 384 MVQPEGLIQKGQEQKVCKLQKSIYGLKQASRSWNIRFDNAIKSYGFKQNVEEPCVYKRIT 443

Query: 61  NSIVAFLVLYVDDILLIENDVGHLTDIKKWLATQFQMKDLGNAQYVIGIQIVRNRKNKTL 120
           NS VAFLVLYVD+ILLI NDV  LTDIKKWLATQFQMKDLGNAQYV+GIQ VRNRKNKTL
Sbjct: 444 NSTVAFLVLYVDEILLIGNDVDRLTDIKKWLATQFQMKDLGNAQYVLGIQTVRNRKNKTL 503

Query: 121 AMSQTSYIDKM--------------------LSRYKMQNSKKGLLPYRYGIHLSKEQCPK 180
            MSQTSYID +                    LSRYKMQNSKKGLL YRY IHLSKEQCPK
Sbjct: 504 TMSQTSYIDMLSRYKMQNSKKGLLSYRYEIHLSRYKMQNSKKGLLSYRYEIHLSKEQCPK 563

Query: 181 TPQEVEDMSNIPYVSVVGSLMYAMLCTRPYICYLVGIVSRYQSNSGHDHWTTVKNILKYL 240
           TPQ+VED+SNIPY S V SLMYAMLCTRP ICY +GI+SRYQSN G DHWTTVKNILKYL
Sbjct: 564 TPQKVEDISNIPYASTVRSLMYAMLCTRPDICYSIGIISRYQSNPGRDHWTTVKNILKYL 623

Query: 241 RRTKDYMLVYGSKDLILTGHSDSDFQTDKDARKSTSRSVFTLNGGAVVWRSIKQSCIVDS 290
           RRTKDYMLVYGSKDLILTG++DSDFQTDKD RKSTS SVFTLNGG VVWRSIKQSCI +S
Sbjct: 624 RRTKDYMLVYGSKDLILTGYTDSDFQTDKDGRKSTSGSVFTLNGGGVVWRSIKQSCIAES 683

BLAST of Cmc10g0280411 vs. NCBI nr
Match: KAA0058854.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 491.5 bits (1264), Expect = 5.2e-135
Identity = 247/289 (85.47%), Postives = 256/289 (88.58%), Query Frame = 0

Query: 1   MVQPEGFIQNGQEQKVCKLQKSIYGLKQASRSWNIRFDTVIKSYGFEQNVDEPCVYKRII 60
           +V  EG IQ GQEQKVCKLQKSIYGLKQASRSW+IRFDT IKSYG EQNVDE CVYKRI 
Sbjct: 317 LVAKEGIIQKGQEQKVCKLQKSIYGLKQASRSWDIRFDTAIKSYGLEQNVDESCVYKRIF 376

Query: 61  NSIVAFLVLYVDDILLIENDVGHLTDIKKWLATQFQMKDLGNAQYVIGIQIVRNRKNKTL 120
           NS VAFLV YVDDILLI NDVGHLTDIK+WLA QFQMK LGNA YV+ IQIVRNRKNKTL
Sbjct: 377 NSTVAFLVPYVDDILLIWNDVGHLTDIKQWLAMQFQMKYLGNAPYVLDIQIVRNRKNKTL 436

Query: 121 AMSQTSYIDKMLSRYKMQNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYVSVVGSL 180
           AMSQTSYIDKMLSRYKMQNSKK LLPYRYGIHLSKEQCPKTPQEVEDMSNIPY   +GSL
Sbjct: 437 AMSQTSYIDKMLSRYKMQNSKKCLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYAFAIGSL 496

Query: 181 MYAMLCTRPYICYLVGIVSRYQSNSGHDHWTTVKNILKYLRRTKDYMLVYGSKDLILTGH 240
           MYAMLC RP ICY V IVS YQSN G DHWT VKNI+KYLRRTKDYM VYGSKDLILT +
Sbjct: 497 MYAMLCIRPDICYSVRIVSTYQSNPGRDHWTVVKNIIKYLRRTKDYMFVYGSKDLILTRY 556

Query: 241 SDSDFQTDKDARKSTSRSVFTLNGGAVVWRSIKQSCIVDSTMEAEYVAA 290
           +DSDFQTDKDARKSTS SVF LNGGAVVWRSIKQSCI DSTME +YVAA
Sbjct: 557 TDSDFQTDKDARKSTSGSVFILNGGAVVWRSIKQSCIADSTMEVKYVAA 605

BLAST of Cmc10g0280411 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 4.2e-71
Identity = 137/290 (47.24%), Postives = 192/290 (66.21%), Query Frame = 0

Query: 1    MVQPEGFIQNGQEQKVCKLQKSIYGLKQASRSWNIRFDTVIKSYGFEQNVDEPCVY-KRI 60
            M QPEGF   G++  VCKL KS+YGLKQA R W ++FD+ +KS  + +   +PCVY KR 
Sbjct: 938  MEQPEGFEVAGKKHMVCKLNKSLYGLKQAPRQWYMKFDSFMKSQTYLKTYSDPCVYFKRF 997

Query: 61   INSIVAFLVLYVDDILLIENDVGHLTDIKKWLATQFQMKDLGNAQYVIGIQIVRNRKNKT 120
              +    L+LYVDD+L++  D G +  +K  L+  F MKDLG AQ ++G++IVR R ++ 
Sbjct: 998  SENNFIILLLYVDDMLIVGKDKGLIAKLKGDLSKSFDMKDLGPAQQILGMKIVRERTSRK 1057

Query: 121  LAMSQTSYIDKMLSRYKMQNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYVSVVGS 180
            L +SQ  YI+++L R+ M+N+K    P    + LSK+ CP T +E  +M+ +PY S VGS
Sbjct: 1058 LWLSQEKYIERVLERFNMKNAKPVSTPLAGHLKLSKKMCPTTVEEKGNMAKVPYSSAVGS 1117

Query: 181  LMYAMLCTRPYICYLVGIVSRYQSNSGHDHWTTVKNILKYLRRTKDYMLVYGSKDLILTG 240
            LMYAM+CTRP I + VG+VSR+  N G +HW  VK IL+YLR T    L +G  D IL G
Sbjct: 1118 LMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCFGGSDPILKG 1177

Query: 241  HSDSDFQTDKDARKSTSRSVFTLNGGAVVWRSIKQSCIVDSTMEAEYVAA 290
            ++D+D   D D RKS++  +FT +GGA+ W+S  Q C+  ST EAEY+AA
Sbjct: 1178 YTDADMAGDIDNRKSSTGYLFTFSGGAISWQSKLQKCVALSTTEAEYIAA 1227

BLAST of Cmc10g0280411 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 157.5 bits (397), Expect = 2.3e-37
Identity = 100/297 (33.67%), Postives = 164/297 (55.22%), Query Frame = 0

Query: 4    PEGFIQNGQEQKVCKLQKSIYGLKQASRSWNIRFDTVIKSYGFEQNVDEPCVY---KRII 63
            P+G   N     VCKL K+IYGLKQA+R W   F+  +K   F  +  + C+Y   K  I
Sbjct: 1021 PQGISCN--SDNVCKLNKAIYGLKQAARCWFEVFEQALKECEFVNSSVDRCIYILDKGNI 1080

Query: 64   NSIVAFLVLYVDDILLIENDVGHLTDIKKWLATQFQMKDLGNAQYVIGIQIVRNRKNKTL 123
            N  + +++LYVDD+++   D+  + + K++L  +F+M DL   ++ IGI+I    +   +
Sbjct: 1081 NENI-YVLLYVDDVVIATGDMTRMNNFKRYLMEKFRMTDLNEIKHFIGIRI--EMQEDKI 1140

Query: 124  AMSQTSYIDKMLSRYKMQNSKKGLLP----YRYGIHLSKEQCPKTPQEVEDMSNIPYVSV 183
             +SQ++Y+ K+LS++ M+N      P      Y +  S E C           N P  S+
Sbjct: 1141 YLSQSAYVKKILSKFNMENCNAVSTPLPSKINYELLNSDEDC-----------NTPCRSL 1200

Query: 184  VGSLMYAMLCTRPYICYLVGIVSRYQSNSGHDHWTTVKNILKYLRRTKDYMLVYGSKDLI 243
            +G LMY MLCTRP +   V I+SRY S +  + W  +K +L+YL+ T D  L++  K+L 
Sbjct: 1201 IGCLMYIMLCTRPDLTTAVNILSRYSSKNNSELWQNLKRVLRYLKGTIDMKLIF-KKNLA 1260

Query: 244  ----LTGHSDSDFQTDKDARKSTSRSVFTL-NGGAVVWRSIKQSCIVDSTMEAEYVA 289
                + G+ DSD+   +  RKST+  +F + +   + W + +Q+ +  S+ EAEY+A
Sbjct: 1261 FENKIIGYVDSDWAGSEIDRKSTTGYLFKMFDFNLICWNTKRQNSVAASSTEAEYMA 1300

BLAST of Cmc10g0280411 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 7.7e-33
Identity = 92/287 (32.06%), Postives = 144/287 (50.17%), Query Frame = 0

Query: 1    MVQPEGFIQNGQEQKVCKLQKSIYGLKQASRSWNIRFDTVIKSYGFEQNVDEPCVYKRII 60
            M QP GF+   +   VC+L+K+IYGLKQA R+W +   T + + GF  ++ +  ++    
Sbjct: 1064 MSQPPGFVDKDRPDYVCRLRKAIYGLKQAPRAWYVELRTYLLTVGFVNSISDTSLFVLQR 1123

Query: 61   NSIVAFLVLYVDDILLIENDVGHLTDIKKWLATQFQMKDLGNAQYVIGIQIVRNRKNKTL 120
               + ++++YVDDIL+  ND   L      L+ +F +K+  +  Y +GI+    R  + L
Sbjct: 1124 GRSIIYMLVYVDDILITGNDTVLLKHTLDALSQRFSVKEHEDLHYFLGIE--AKRVPQGL 1183

Query: 121  AMSQTSYIDKMLSRYKMQNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYVSVVGSL 180
             +SQ  Y   +L+R  M  +K    P      L+     K P   E      Y  +VGSL
Sbjct: 1184 HLSQRRYTLDLLARTNMLTAKPVATPMATSPKLTLHSGTKLPDPTE------YRGIVGSL 1243

Query: 181  MYAMLCTRPYICYLVGIVSRYQSNSGHDHWTTVKNILKYLRRTKDY-MLVYGSKDLILTG 240
             Y +  TRP + Y V  +S+Y      DHW  +K +L+YL  T D+ + +     L L  
Sbjct: 1244 QY-LAFTRPDLSYAVNRLSQYMHMPTDDHWNALKRVLRYLAGTPDHGIFLKKGNTLSLHA 1303

Query: 241  HSDSDFQTDKDARKSTSRSVFTLNGGAVVWRSIKQSCIVDSTMEAEY 287
            +SD+D+  D D   ST+  +  L    + W S KQ  +V S+ EAEY
Sbjct: 1304 YSDADWAGDTDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEY 1341

BLAST of Cmc10g0280411 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 2.1e-30
Identity = 94/287 (32.75%), Postives = 142/287 (49.48%), Query Frame = 0

Query: 1    MVQPEGFIQNGQEQKVCKLQKSIYGLKQASRSWNIRFDTVIKSYGFEQNVDEPCVYKRII 60
            M QP GFI   +   VCKL+K++YGLKQA R+W +     + + GF  +V +  ++    
Sbjct: 1081 MSQPPGFIDKDRPNYVCKLRKALYGLKQAPRAWYVELRNYLLTIGFVNSVSDTSLFVLQR 1140

Query: 61   NSIVAFLVLYVDDILLIENDVGHLTDIKKWLATQFQMKDLGNAQYVIGIQIVRNRKNKTL 120
               + ++++YVDDIL+  ND   L +    L+ +F +KD     Y +GI+    R    L
Sbjct: 1141 GKSIVYMLVYVDDILITGNDPTLLHNTLDNLSQRFSVKDHEELHYFLGIE--AKRVPTGL 1200

Query: 121  AMSQTSYIDKMLSRYKMQNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYVSVVGSL 180
             +SQ  YI  +L+R  M  +K    P      LS     K     E      Y  +VGSL
Sbjct: 1201 HLSQRRYILDLLARTNMITAKPVTTPMAPSPKLSLYSGTKLTDPTE------YRGIVGSL 1260

Query: 181  MYAMLCTRPYICYLVGIVSRYQSNSGHDHWTTVKNILKYLRRTKDY-MLVYGSKDLILTG 240
             Y +  TRP I Y V  +S++      +H   +K IL+YL  T ++ + +     L L  
Sbjct: 1261 QY-LAFTRPDISYAVNRLSQFMHMPTEEHLQALKRILRYLAGTPNHGIFLKKGNTLSLHA 1320

Query: 241  HSDSDFQTDKDARKSTSRSVFTLNGGAVVWRSIKQSCIVDSTMEAEY 287
            +SD+D+  DKD   ST+  +  L    + W S KQ  +V S+ EAEY
Sbjct: 1321 YSDADWAGDKDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEY 1358

BLAST of Cmc10g0280411 vs. ExPASy Swiss-Prot
Match: P25600 (Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY5A PE=5 SV=2)

HSP 1 Score: 114.0 bits (284), Expect = 2.9e-24
Identity = 86/291 (29.55%), Postives = 132/291 (45.36%), Query Frame = 0

Query: 3   QPEGFIQNGQEQKVCKLQKSIYGLKQASRSWNIRFDTVIKSYGFEQNVDEPCVYKRIINS 62
           QP GF+       V +L   +YGLKQA   WN   +  +K  GF ++  E  +Y R  + 
Sbjct: 20  QPPGFVNERNPDYVWELYGGMYGLKQAPLLWNEHINNTLKKIGFCRHEGEHGLYFRSTSD 79

Query: 63  IVAFLVLYVDDILLIENDVGHLTDIKKWLATQFQMKDLGNAQYVIGIQIVRNRKNKTLAM 122
              ++ +YVDD+L+          +K+ L   + MKDLG     +G+ I     N  + +
Sbjct: 80  GPIYIAVYVDDLLVAAPSPKIYDRVKQELTKLYSMKDLGKVDKFLGLNI-HQSSNGDITL 139

Query: 123 SQTSYIDKMLSRYKMQNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYVSVVGSLMY 182
           S   YI K  S  ++   K    P    +  SK     T   ++D++  PY S+VG L++
Sbjct: 140 SLQDYIAKAASESEINTFKLTQTP----LCNSKPLFETTSPHLKDIT--PYQSIVGQLLF 199

Query: 183 AMLCTRPYICYLVGIVSRYQSNSGHDHWTTVKNILKYLRRTKDYMLVYGS-KDLILTGHS 242
                RP I Y V ++SR+       H  + + +L+YL  T+   L Y S   L LT + 
Sbjct: 200 CANTGRPDISYPVSLLSRFLREPRAIHLESARRVLRYLYTTRSMCLKYRSGSQLALTVYC 259

Query: 243 DSDFQTDKDARKSTSRSVFTLNGGAVVWRSIKQSCIVD-STMEAEYVAAQK 292
           D+      D   ST   V  L G  V W S K   ++   + EAEY+ A +
Sbjct: 260 DASHGAIHDLPHSTGGYVTLLAGAPVTWSSKKLKGVIPVPSTEAEYITASE 303

BLAST of Cmc10g0280411 vs. ExPASy TrEMBL
Match: A0A5D3CI71 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold73G00330 PE=4 SV=1)

HSP 1 Score: 523.1 bits (1346), Expect = 7.7e-145
Identity = 257/289 (88.93%), Postives = 270/289 (93.43%), Query Frame = 0

Query: 1   MVQPEGFIQNGQEQKVCKLQKSIYGLKQASRSWNIRFDTVIKSYGFEQNVDEPCVYKRII 60
           MVQPEGFIQ GQEQKVCKL+KSIYGLKQ +RSWNIRFDT IKSYGFEQNVDEPCVYKR I
Sbjct: 1   MVQPEGFIQKGQEQKVCKLKKSIYGLKQVARSWNIRFDTAIKSYGFEQNVDEPCVYKRFI 60

Query: 61  NSIVAFLVLYVDDILLIENDVGHLTDIKKWLATQFQMKDLGNAQYVIGIQIVRNRKNKTL 120
           N+ VAFL+LYVDDILLI NDVGHLTDIK+WLATQFQMKDLGNAQYV+GIQIVRN KNKTL
Sbjct: 61  NATVAFLLLYVDDILLIGNDVGHLTDIKEWLATQFQMKDLGNAQYVLGIQIVRNGKNKTL 120

Query: 121 AMSQTSYIDKMLSRYKMQNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYVSVVGSL 180
           AMSQTSYIDKMLSRYKMQNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPY S +GSL
Sbjct: 121 AMSQTSYIDKMLSRYKMQNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASAIGSL 180

Query: 181 MYAMLCTRPYICYLVGIVSRYQSNSGHDHWTTVKNILKYLRRTKDYMLVYGSKDLILTGH 240
           MYAMLCTR  ICY VGIV+RYQSN G DHWT VKNILKYLRRTKDYMLVYGSKDLILTG+
Sbjct: 181 MYAMLCTRVDICYSVGIVNRYQSNPGRDHWTAVKNILKYLRRTKDYMLVYGSKDLILTGY 240

Query: 241 SDSDFQTDKDARKSTSRSVFTLNGGAVVWRSIKQSCIVDSTMEAEYVAA 290
           +DSDFQTDKDARKSTS S+FTLN GAVVW+SIKQSCI  STMEA+YVAA
Sbjct: 241 TDSDFQTDKDARKSTSGSIFTLNEGAVVWKSIKQSCIAHSTMEAKYVAA 289

BLAST of Cmc10g0280411 vs. ExPASy TrEMBL
Match: A0A5D3BX45 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1369G00740 PE=4 SV=1)

HSP 1 Score: 515.4 bits (1326), Expect = 1.6e-142
Identity = 257/288 (89.24%), Postives = 264/288 (91.67%), Query Frame = 0

Query: 1   MVQPEGFIQNGQEQKVCKLQKSIYGLKQASRSWNIRFDTVIKSYGFEQNVDEPCVYKRII 60
           MVQPE FIQ GQEQK+CKLQKSIYGLKQASRS NIRFDT IKSYG EQNVDEPCVYKRI+
Sbjct: 356 MVQPERFIQKGQEQKICKLQKSIYGLKQASRSCNIRFDTAIKSYGLEQNVDEPCVYKRIM 415

Query: 61  NSIVAFLVLYVDDILLIENDVGHLTDIKKWLATQFQMKDLGNAQYVIGIQIVRNRKNKTL 120
           NS VAFLVLYVDDILLI NDVGHL DIKKWLA QFQMKDLGNAQYV+G+QIVRNRKNKTL
Sbjct: 416 NSTVAFLVLYVDDILLIGNDVGHLADIKKWLAMQFQMKDLGNAQYVLGVQIVRNRKNKTL 475

Query: 121 AMSQTSYIDKMLSRYKMQNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYVSVVGSL 180
           AMSQTSYIDKMLSRYKM NSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPY S VGSL
Sbjct: 476 AMSQTSYIDKMLSRYKMHNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASAVGSL 535

Query: 181 MYAMLCTRPYICYLVGIVSRYQSNSGHDHWTTVKNILKYLRRTKDYMLVYGSKDLILTGH 240
           MY MLCTRP ICY VGIVSR QS  G DHWTTVKNILKYLRRTKDYMLVYGSKDLILTG+
Sbjct: 536 MYVMLCTRPNICYSVGIVSRCQSKPGRDHWTTVKNILKYLRRTKDYMLVYGSKDLILTGY 595

Query: 241 SDSDFQTDKDARKSTSRSVFTLNGGAVVWRSIKQSCIVDSTMEAEYVA 289
           +D  FQTDKDARKSTS  VFT+NGGAVVWRSIKQSCI DSTMEAEYVA
Sbjct: 596 TDFYFQTDKDARKSTSGLVFTMNGGAVVWRSIKQSCIADSTMEAEYVA 643

BLAST of Cmc10g0280411 vs. ExPASy TrEMBL
Match: E2GK51 (Gag/pol protein (Fragment) OS=Bryonia dioica OX=3652 PE=4 SV=1)

HSP 1 Score: 513.8 bits (1322), Expect = 4.7e-142
Identity = 250/289 (86.51%), Postives = 269/289 (93.08%), Query Frame = 0

Query: 1    MVQPEGFIQNGQEQKVCKLQKSIYGLKQASRSWNIRFDTVIKSYGFEQNVDEPCVYKRII 60
            MVQPEGFI   QEQKVCKLQKSIYGLKQASRSWNIRFDT IKSYGFEQNVDEPCVYK+I+
Sbjct: 932  MVQPEGFIAQDQEQKVCKLQKSIYGLKQASRSWNIRFDTAIKSYGFEQNVDEPCVYKKIV 991

Query: 61   NSIVAFLVLYVDDILLIENDVGHLTDIKKWLATQFQMKDLGNAQYVIGIQIVRNRKNKTL 120
            NS+VAFL+LYVDDILLI NDV +LTD+KKWL TQFQMKDLG AQY++GIQIVRNRKNKTL
Sbjct: 992  NSVVAFLILYVDDILLIGNDVEYLTDVKKWLNTQFQMKDLGEAQYILGIQIVRNRKNKTL 1051

Query: 121  AMSQTSYIDKMLSRYKMQNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYVSVVGSL 180
            AMSQ SYIDK+LSRYKMQNSKKG LP+R+GIHLSKEQCPKTPQEVEDM NIPY S VGSL
Sbjct: 1052 AMSQASYIDKVLSRYKMQNSKKGQLPFRHGIHLSKEQCPKTPQEVEDMRNIPYSSAVGSL 1111

Query: 181  MYAMLCTRPYICYLVGIVSRYQSNSGHDHWTTVKNILKYLRRTKDYMLVYGSKDLILTGH 240
            MYAMLCTRP ICY VGIVSRYQSN G DHWT VKNILKYLRRT++YMLVYG+KDLILTG+
Sbjct: 1112 MYAMLCTRPDICYSVGIVSRYQSNPGRDHWTAVKNILKYLRRTRNYMLVYGAKDLILTGY 1171

Query: 241  SDSDFQTDKDARKSTSRSVFTLNGGAVVWRSIKQSCIVDSTMEAEYVAA 290
            +DSDFQ+DKDARKSTS SVFTLNGGAVVWRS+KQ+CI DSTMEAEYVAA
Sbjct: 1172 TDSDFQSDKDARKSTSGSVFTLNGGAVVWRSVKQTCIADSTMEAEYVAA 1220

BLAST of Cmc10g0280411 vs. ExPASy TrEMBL
Match: A0A5A7V9B0 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold468G001330 PE=4 SV=1)

HSP 1 Score: 498.0 bits (1281), Expect = 2.7e-137
Identity = 252/309 (81.55%), Postives = 264/309 (85.44%), Query Frame = 0

Query: 1   MVQPEGFIQNGQEQKVCKLQKSIYGLKQASRSWNIRFDTVIKSYGFEQNVDEPCVYKRII 60
           MVQPEG IQ GQEQKVCKLQKSIYGLKQASRSWNIRFD  IKSYGF+QNV+EPCVYKRI 
Sbjct: 384 MVQPEGLIQKGQEQKVCKLQKSIYGLKQASRSWNIRFDNAIKSYGFKQNVEEPCVYKRIT 443

Query: 61  NSIVAFLVLYVDDILLIENDVGHLTDIKKWLATQFQMKDLGNAQYVIGIQIVRNRKNKTL 120
           NS VAFLVLYVD+ILLI NDV  LTDIKKWLATQFQMKDLGNAQYV+GIQ VRNRKNKTL
Sbjct: 444 NSTVAFLVLYVDEILLIGNDVDRLTDIKKWLATQFQMKDLGNAQYVLGIQTVRNRKNKTL 503

Query: 121 AMSQTSYIDKM--------------------LSRYKMQNSKKGLLPYRYGIHLSKEQCPK 180
            MSQTSYID +                    LSRYKMQNSKKGLL YRY IHLSKEQCPK
Sbjct: 504 TMSQTSYIDMLSRYKMQNSKKGLLSYRYEIHLSRYKMQNSKKGLLSYRYEIHLSKEQCPK 563

Query: 181 TPQEVEDMSNIPYVSVVGSLMYAMLCTRPYICYLVGIVSRYQSNSGHDHWTTVKNILKYL 240
           TPQ+VED+SNIPY S V SLMYAMLCTRP ICY +GI+SRYQSN G DHWTTVKNILKYL
Sbjct: 564 TPQKVEDISNIPYASTVRSLMYAMLCTRPDICYSIGIISRYQSNPGRDHWTTVKNILKYL 623

Query: 241 RRTKDYMLVYGSKDLILTGHSDSDFQTDKDARKSTSRSVFTLNGGAVVWRSIKQSCIVDS 290
           RRTKDYMLVYGSKDLILTG++DSDFQTDKD RKSTS SVFTLNGG VVWRSIKQSCI +S
Sbjct: 624 RRTKDYMLVYGSKDLILTGYTDSDFQTDKDGRKSTSGSVFTLNGGGVVWRSIKQSCIAES 683

BLAST of Cmc10g0280411 vs. ExPASy TrEMBL
Match: A0A5D3DJL5 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1607G00880 PE=4 SV=1)

HSP 1 Score: 491.5 bits (1264), Expect = 2.5e-135
Identity = 247/289 (85.47%), Postives = 256/289 (88.58%), Query Frame = 0

Query: 1   MVQPEGFIQNGQEQKVCKLQKSIYGLKQASRSWNIRFDTVIKSYGFEQNVDEPCVYKRII 60
           +V  EG IQ GQEQKVCKLQKSIYGLKQASRSW+IRFDT IKSYG EQNVDE CVYKRI 
Sbjct: 191 LVAKEGIIQKGQEQKVCKLQKSIYGLKQASRSWDIRFDTAIKSYGLEQNVDESCVYKRIF 250

Query: 61  NSIVAFLVLYVDDILLIENDVGHLTDIKKWLATQFQMKDLGNAQYVIGIQIVRNRKNKTL 120
           NS VAFLV YVDDILLI NDVGHLTDIK+WLA QFQMK LGNA YV+ IQIVRNRKNKTL
Sbjct: 251 NSTVAFLVPYVDDILLIWNDVGHLTDIKQWLAMQFQMKYLGNAPYVLDIQIVRNRKNKTL 310

Query: 121 AMSQTSYIDKMLSRYKMQNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYVSVVGSL 180
           AMSQTSYIDKMLSRYKMQNSKK LLPYRYGIHLSKEQCPKTPQEVEDMSNIPY   +GSL
Sbjct: 311 AMSQTSYIDKMLSRYKMQNSKKCLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYAFAIGSL 370

Query: 181 MYAMLCTRPYICYLVGIVSRYQSNSGHDHWTTVKNILKYLRRTKDYMLVYGSKDLILTGH 240
           MYAMLC RP ICY V IVS YQSN G DHWT VKNI+KYLRRTKDYM VYGSKDLILT +
Sbjct: 371 MYAMLCIRPDICYSVRIVSTYQSNPGRDHWTVVKNIIKYLRRTKDYMFVYGSKDLILTRY 430

Query: 241 SDSDFQTDKDARKSTSRSVFTLNGGAVVWRSIKQSCIVDSTMEAEYVAA 290
           +DSDFQTDKDARKSTS SVF LNGGAVVWRSIKQSCI DSTME +YVAA
Sbjct: 431 TDSDFQTDKDARKSTSGSVFILNGGAVVWRSIKQSCIADSTMEVKYVAA 479

BLAST of Cmc10g0280411 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 123.6 bits (309), Expect = 2.6e-28
Identity = 82/274 (29.93%), Postives = 139/274 (50.73%), Query Frame = 0

Query: 16  VCKLQKSIYGLKQASRSWNIRFDTVIKSYGFEQNVDEPCVYKRIINSIVAFLVLYVDDIL 75
           VC L+KSIYGLKQASR W ++F   +  +GF Q+  +   + +I  ++   +++YVDDI+
Sbjct: 229 VCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDII 288

Query: 76  LIENDVGHLTDIKKWLATQFQMKDLGNAQYVIGIQIVRNRKNKTLAMSQTSYIDKMLSRY 135
           +  N+   + ++K  L + F+++DLG  +Y +G++I R+     + + Q  Y   +L   
Sbjct: 289 ICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAAG--INICQRKYALDLLDET 348

Query: 136 KMQNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYVSVVGSLMYAMLCTRPYICYLV 195
            +   K   +P    +  S           + +    Y  ++G LMY  + TR  I + V
Sbjct: 349 GLLGCKPSSVPMDPSVTFSAH------SGGDFVDAKAYRRLIGRLMYLQI-TRLDISFAV 408

Query: 196 GIVSRYQSNSGHDHWTTVKNILKYLRRTKDYMLVYGSK-DLILTGHSDSDFQTDKDARKS 255
             +S++       H   V  IL Y++ T    L Y S+ ++ L   SD+ FQ+ KD R+S
Sbjct: 409 NKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRS 468

Query: 256 TSRSVFTLNGGAVVWRSIKQSCIVDSTMEAEYVA 289
           T+     L    + W+S KQ  +  S+ EAEY A
Sbjct: 469 TNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRA 493

BLAST of Cmc10g0280411 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 78.6 bits (192), Expect = 9.7e-15
Identity = 69/226 (30.53%), Postives = 111/226 (49.12%), Query Frame = 0

Query: 66  FLVLYVDDILLIENDVGHLTDIKKWLATQFQMKDLGNAQYVIGIQIVRNRKNKTLAMSQT 125
           +L+LYVDDILL  +    L  +   L++ F MKDLG   Y +GIQI  +     L +SQT
Sbjct: 2   YLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSG--LFLSQT 61

Query: 126 SYIDKMLSRYKMQNSK--KGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYVSVVGSLMYA 185
            Y +++L+   M + K     LP +    +S  + P       D S+  + S+VG+L Y 
Sbjct: 62  KYAEQILNNAGMLDCKPMSTPLPLKLNSSVSTAKYP-------DPSD--FRSIVGALQYL 121

Query: 186 MLCTRPYICYLVGIVSRYQSNSGHDHWTTVKNILKYLRRTKDY-MLVYGSKDLILTGHSD 245
            L TRP I Y V IV +         +  +K +L+Y++ T  + + ++ +  L +    D
Sbjct: 122 TL-TRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCD 181

Query: 246 SDFQTDKDARKSTSRSVFTLNGGAVVWRSIKQSCIVDSTMEAEYVA 289
           SD+      R+ST+     L    + W + +Q  +  S+ E EY A
Sbjct: 182 SDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRA 215

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
TYK11050.11.6e-14488.93gag/pol protein [Cucumis melo var. makuwa][more]
TYK03644.13.3e-14289.24gag/pol protein [Cucumis melo var. makuwa][more]
ADJ18449.19.7e-14286.51gag/pol protein, partial [Bryonia dioica][more]
KAA0063026.15.5e-13781.55gag/pol protein [Cucumis melo var. makuwa][more]
KAA0058854.15.2e-13585.47gag/pol protein [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
P109784.2e-7147.24Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... [more]
P041462.3e-3733.67Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3[more]
Q9ZT947.7e-3332.06Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... [more]
Q94HW22.1e-3032.75Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... [more]
P256002.9e-2429.55Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain AT... [more]
Match NameE-valueIdentityDescription
A0A5D3CI717.7e-14588.93Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold73G00330... [more]
A0A5D3BX451.6e-14289.24Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1369G007... [more]
E2GK514.7e-14286.51Gag/pol protein (Fragment) OS=Bryonia dioica OX=3652 PE=4 SV=1[more]
A0A5A7V9B02.7e-13781.55Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold468G0013... [more]
A0A5D3DJL52.5e-13585.47Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1607G008... [more]
Match NameE-valueIdentityDescription
AT4G23160.12.6e-2829.93cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [more]
ATMG00810.19.7e-1530.53DNA/RNA polymerases superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 1..146
e-value: 7.1E-33
score: 114.2
NoneNo IPR availablePANTHERPTHR45895FAMILY NOT NAMEDcoord: 1..229
NoneNo IPR availableCDDcd09272RNase_HI_RT_Ty1coord: 238..289
e-value: 7.72742E-21
score: 84.4421
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 10..238

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc10g0280411.1Cmc10g0280411.1mRNA