Homology
BLAST of Cmc10g0280411 vs. NCBI nr
Match:
TYK11050.1 (gag/pol protein [Cucumis melo var. makuwa])
HSP 1 Score: 523.1 bits (1346), Expect = 1.6e-144
Identity = 257/289 (88.93%), Postives = 270/289 (93.43%), Query Frame = 0
Query: 1 MVQPEGFIQNGQEQKVCKLQKSIYGLKQASRSWNIRFDTVIKSYGFEQNVDEPCVYKRII 60
MVQPEGFIQ GQEQKVCKL+KSIYGLKQ +RSWNIRFDT IKSYGFEQNVDEPCVYKR I
Sbjct: 1 MVQPEGFIQKGQEQKVCKLKKSIYGLKQVARSWNIRFDTAIKSYGFEQNVDEPCVYKRFI 60
Query: 61 NSIVAFLVLYVDDILLIENDVGHLTDIKKWLATQFQMKDLGNAQYVIGIQIVRNRKNKTL 120
N+ VAFL+LYVDDILLI NDVGHLTDIK+WLATQFQMKDLGNAQYV+GIQIVRN KNKTL
Sbjct: 61 NATVAFLLLYVDDILLIGNDVGHLTDIKEWLATQFQMKDLGNAQYVLGIQIVRNGKNKTL 120
Query: 121 AMSQTSYIDKMLSRYKMQNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYVSVVGSL 180
AMSQTSYIDKMLSRYKMQNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPY S +GSL
Sbjct: 121 AMSQTSYIDKMLSRYKMQNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASAIGSL 180
Query: 181 MYAMLCTRPYICYLVGIVSRYQSNSGHDHWTTVKNILKYLRRTKDYMLVYGSKDLILTGH 240
MYAMLCTR ICY VGIV+RYQSN G DHWT VKNILKYLRRTKDYMLVYGSKDLILTG+
Sbjct: 181 MYAMLCTRVDICYSVGIVNRYQSNPGRDHWTAVKNILKYLRRTKDYMLVYGSKDLILTGY 240
Query: 241 SDSDFQTDKDARKSTSRSVFTLNGGAVVWRSIKQSCIVDSTMEAEYVAA 290
+DSDFQTDKDARKSTS S+FTLN GAVVW+SIKQSCI STMEA+YVAA
Sbjct: 241 TDSDFQTDKDARKSTSGSIFTLNEGAVVWKSIKQSCIAHSTMEAKYVAA 289
BLAST of Cmc10g0280411 vs. NCBI nr
Match:
TYK03644.1 (gag/pol protein [Cucumis melo var. makuwa])
HSP 1 Score: 515.4 bits (1326), Expect = 3.3e-142
Identity = 257/288 (89.24%), Postives = 264/288 (91.67%), Query Frame = 0
Query: 1 MVQPEGFIQNGQEQKVCKLQKSIYGLKQASRSWNIRFDTVIKSYGFEQNVDEPCVYKRII 60
MVQPE FIQ GQEQK+CKLQKSIYGLKQASRS NIRFDT IKSYG EQNVDEPCVYKRI+
Sbjct: 356 MVQPERFIQKGQEQKICKLQKSIYGLKQASRSCNIRFDTAIKSYGLEQNVDEPCVYKRIM 415
Query: 61 NSIVAFLVLYVDDILLIENDVGHLTDIKKWLATQFQMKDLGNAQYVIGIQIVRNRKNKTL 120
NS VAFLVLYVDDILLI NDVGHL DIKKWLA QFQMKDLGNAQYV+G+QIVRNRKNKTL
Sbjct: 416 NSTVAFLVLYVDDILLIGNDVGHLADIKKWLAMQFQMKDLGNAQYVLGVQIVRNRKNKTL 475
Query: 121 AMSQTSYIDKMLSRYKMQNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYVSVVGSL 180
AMSQTSYIDKMLSRYKM NSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPY S VGSL
Sbjct: 476 AMSQTSYIDKMLSRYKMHNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASAVGSL 535
Query: 181 MYAMLCTRPYICYLVGIVSRYQSNSGHDHWTTVKNILKYLRRTKDYMLVYGSKDLILTGH 240
MY MLCTRP ICY VGIVSR QS G DHWTTVKNILKYLRRTKDYMLVYGSKDLILTG+
Sbjct: 536 MYVMLCTRPNICYSVGIVSRCQSKPGRDHWTTVKNILKYLRRTKDYMLVYGSKDLILTGY 595
Query: 241 SDSDFQTDKDARKSTSRSVFTLNGGAVVWRSIKQSCIVDSTMEAEYVA 289
+D FQTDKDARKSTS VFT+NGGAVVWRSIKQSCI DSTMEAEYVA
Sbjct: 596 TDFYFQTDKDARKSTSGLVFTMNGGAVVWRSIKQSCIADSTMEAEYVA 643
BLAST of Cmc10g0280411 vs. NCBI nr
Match:
ADJ18449.1 (gag/pol protein, partial [Bryonia dioica])
HSP 1 Score: 513.8 bits (1322), Expect = 9.7e-142
Identity = 250/289 (86.51%), Postives = 269/289 (93.08%), Query Frame = 0
Query: 1 MVQPEGFIQNGQEQKVCKLQKSIYGLKQASRSWNIRFDTVIKSYGFEQNVDEPCVYKRII 60
MVQPEGFI QEQKVCKLQKSIYGLKQASRSWNIRFDT IKSYGFEQNVDEPCVYK+I+
Sbjct: 932 MVQPEGFIAQDQEQKVCKLQKSIYGLKQASRSWNIRFDTAIKSYGFEQNVDEPCVYKKIV 991
Query: 61 NSIVAFLVLYVDDILLIENDVGHLTDIKKWLATQFQMKDLGNAQYVIGIQIVRNRKNKTL 120
NS+VAFL+LYVDDILLI NDV +LTD+KKWL TQFQMKDLG AQY++GIQIVRNRKNKTL
Sbjct: 992 NSVVAFLILYVDDILLIGNDVEYLTDVKKWLNTQFQMKDLGEAQYILGIQIVRNRKNKTL 1051
Query: 121 AMSQTSYIDKMLSRYKMQNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYVSVVGSL 180
AMSQ SYIDK+LSRYKMQNSKKG LP+R+GIHLSKEQCPKTPQEVEDM NIPY S VGSL
Sbjct: 1052 AMSQASYIDKVLSRYKMQNSKKGQLPFRHGIHLSKEQCPKTPQEVEDMRNIPYSSAVGSL 1111
Query: 181 MYAMLCTRPYICYLVGIVSRYQSNSGHDHWTTVKNILKYLRRTKDYMLVYGSKDLILTGH 240
MYAMLCTRP ICY VGIVSRYQSN G DHWT VKNILKYLRRT++YMLVYG+KDLILTG+
Sbjct: 1112 MYAMLCTRPDICYSVGIVSRYQSNPGRDHWTAVKNILKYLRRTRNYMLVYGAKDLILTGY 1171
Query: 241 SDSDFQTDKDARKSTSRSVFTLNGGAVVWRSIKQSCIVDSTMEAEYVAA 290
+DSDFQ+DKDARKSTS SVFTLNGGAVVWRS+KQ+CI DSTMEAEYVAA
Sbjct: 1172 TDSDFQSDKDARKSTSGSVFTLNGGAVVWRSVKQTCIADSTMEAEYVAA 1220
BLAST of Cmc10g0280411 vs. NCBI nr
Match:
KAA0063026.1 (gag/pol protein [Cucumis melo var. makuwa])
HSP 1 Score: 498.0 bits (1281), Expect = 5.5e-137
Identity = 252/309 (81.55%), Postives = 264/309 (85.44%), Query Frame = 0
Query: 1 MVQPEGFIQNGQEQKVCKLQKSIYGLKQASRSWNIRFDTVIKSYGFEQNVDEPCVYKRII 60
MVQPEG IQ GQEQKVCKLQKSIYGLKQASRSWNIRFD IKSYGF+QNV+EPCVYKRI
Sbjct: 384 MVQPEGLIQKGQEQKVCKLQKSIYGLKQASRSWNIRFDNAIKSYGFKQNVEEPCVYKRIT 443
Query: 61 NSIVAFLVLYVDDILLIENDVGHLTDIKKWLATQFQMKDLGNAQYVIGIQIVRNRKNKTL 120
NS VAFLVLYVD+ILLI NDV LTDIKKWLATQFQMKDLGNAQYV+GIQ VRNRKNKTL
Sbjct: 444 NSTVAFLVLYVDEILLIGNDVDRLTDIKKWLATQFQMKDLGNAQYVLGIQTVRNRKNKTL 503
Query: 121 AMSQTSYIDKM--------------------LSRYKMQNSKKGLLPYRYGIHLSKEQCPK 180
MSQTSYID + LSRYKMQNSKKGLL YRY IHLSKEQCPK
Sbjct: 504 TMSQTSYIDMLSRYKMQNSKKGLLSYRYEIHLSRYKMQNSKKGLLSYRYEIHLSKEQCPK 563
Query: 181 TPQEVEDMSNIPYVSVVGSLMYAMLCTRPYICYLVGIVSRYQSNSGHDHWTTVKNILKYL 240
TPQ+VED+SNIPY S V SLMYAMLCTRP ICY +GI+SRYQSN G DHWTTVKNILKYL
Sbjct: 564 TPQKVEDISNIPYASTVRSLMYAMLCTRPDICYSIGIISRYQSNPGRDHWTTVKNILKYL 623
Query: 241 RRTKDYMLVYGSKDLILTGHSDSDFQTDKDARKSTSRSVFTLNGGAVVWRSIKQSCIVDS 290
RRTKDYMLVYGSKDLILTG++DSDFQTDKD RKSTS SVFTLNGG VVWRSIKQSCI +S
Sbjct: 624 RRTKDYMLVYGSKDLILTGYTDSDFQTDKDGRKSTSGSVFTLNGGGVVWRSIKQSCIAES 683
BLAST of Cmc10g0280411 vs. NCBI nr
Match:
KAA0058854.1 (gag/pol protein [Cucumis melo var. makuwa])
HSP 1 Score: 491.5 bits (1264), Expect = 5.2e-135
Identity = 247/289 (85.47%), Postives = 256/289 (88.58%), Query Frame = 0
Query: 1 MVQPEGFIQNGQEQKVCKLQKSIYGLKQASRSWNIRFDTVIKSYGFEQNVDEPCVYKRII 60
+V EG IQ GQEQKVCKLQKSIYGLKQASRSW+IRFDT IKSYG EQNVDE CVYKRI
Sbjct: 317 LVAKEGIIQKGQEQKVCKLQKSIYGLKQASRSWDIRFDTAIKSYGLEQNVDESCVYKRIF 376
Query: 61 NSIVAFLVLYVDDILLIENDVGHLTDIKKWLATQFQMKDLGNAQYVIGIQIVRNRKNKTL 120
NS VAFLV YVDDILLI NDVGHLTDIK+WLA QFQMK LGNA YV+ IQIVRNRKNKTL
Sbjct: 377 NSTVAFLVPYVDDILLIWNDVGHLTDIKQWLAMQFQMKYLGNAPYVLDIQIVRNRKNKTL 436
Query: 121 AMSQTSYIDKMLSRYKMQNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYVSVVGSL 180
AMSQTSYIDKMLSRYKMQNSKK LLPYRYGIHLSKEQCPKTPQEVEDMSNIPY +GSL
Sbjct: 437 AMSQTSYIDKMLSRYKMQNSKKCLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYAFAIGSL 496
Query: 181 MYAMLCTRPYICYLVGIVSRYQSNSGHDHWTTVKNILKYLRRTKDYMLVYGSKDLILTGH 240
MYAMLC RP ICY V IVS YQSN G DHWT VKNI+KYLRRTKDYM VYGSKDLILT +
Sbjct: 497 MYAMLCIRPDICYSVRIVSTYQSNPGRDHWTVVKNIIKYLRRTKDYMFVYGSKDLILTRY 556
Query: 241 SDSDFQTDKDARKSTSRSVFTLNGGAVVWRSIKQSCIVDSTMEAEYVAA 290
+DSDFQTDKDARKSTS SVF LNGGAVVWRSIKQSCI DSTME +YVAA
Sbjct: 557 TDSDFQTDKDARKSTSGSVFILNGGAVVWRSIKQSCIADSTMEVKYVAA 605
BLAST of Cmc10g0280411 vs. ExPASy Swiss-Prot
Match:
P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)
HSP 1 Score: 269.6 bits (688), Expect = 4.2e-71
Identity = 137/290 (47.24%), Postives = 192/290 (66.21%), Query Frame = 0
Query: 1 MVQPEGFIQNGQEQKVCKLQKSIYGLKQASRSWNIRFDTVIKSYGFEQNVDEPCVY-KRI 60
M QPEGF G++ VCKL KS+YGLKQA R W ++FD+ +KS + + +PCVY KR
Sbjct: 938 MEQPEGFEVAGKKHMVCKLNKSLYGLKQAPRQWYMKFDSFMKSQTYLKTYSDPCVYFKRF 997
Query: 61 INSIVAFLVLYVDDILLIENDVGHLTDIKKWLATQFQMKDLGNAQYVIGIQIVRNRKNKT 120
+ L+LYVDD+L++ D G + +K L+ F MKDLG AQ ++G++IVR R ++
Sbjct: 998 SENNFIILLLYVDDMLIVGKDKGLIAKLKGDLSKSFDMKDLGPAQQILGMKIVRERTSRK 1057
Query: 121 LAMSQTSYIDKMLSRYKMQNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYVSVVGS 180
L +SQ YI+++L R+ M+N+K P + LSK+ CP T +E +M+ +PY S VGS
Sbjct: 1058 LWLSQEKYIERVLERFNMKNAKPVSTPLAGHLKLSKKMCPTTVEEKGNMAKVPYSSAVGS 1117
Query: 181 LMYAMLCTRPYICYLVGIVSRYQSNSGHDHWTTVKNILKYLRRTKDYMLVYGSKDLILTG 240
LMYAM+CTRP I + VG+VSR+ N G +HW VK IL+YLR T L +G D IL G
Sbjct: 1118 LMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCFGGSDPILKG 1177
Query: 241 HSDSDFQTDKDARKSTSRSVFTLNGGAVVWRSIKQSCIVDSTMEAEYVAA 290
++D+D D D RKS++ +FT +GGA+ W+S Q C+ ST EAEY+AA
Sbjct: 1178 YTDADMAGDIDNRKSSTGYLFTFSGGAISWQSKLQKCVALSTTEAEYIAA 1227
BLAST of Cmc10g0280411 vs. ExPASy Swiss-Prot
Match:
P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)
HSP 1 Score: 157.5 bits (397), Expect = 2.3e-37
Identity = 100/297 (33.67%), Postives = 164/297 (55.22%), Query Frame = 0
Query: 4 PEGFIQNGQEQKVCKLQKSIYGLKQASRSWNIRFDTVIKSYGFEQNVDEPCVY---KRII 63
P+G N VCKL K+IYGLKQA+R W F+ +K F + + C+Y K I
Sbjct: 1021 PQGISCN--SDNVCKLNKAIYGLKQAARCWFEVFEQALKECEFVNSSVDRCIYILDKGNI 1080
Query: 64 NSIVAFLVLYVDDILLIENDVGHLTDIKKWLATQFQMKDLGNAQYVIGIQIVRNRKNKTL 123
N + +++LYVDD+++ D+ + + K++L +F+M DL ++ IGI+I + +
Sbjct: 1081 NENI-YVLLYVDDVVIATGDMTRMNNFKRYLMEKFRMTDLNEIKHFIGIRI--EMQEDKI 1140
Query: 124 AMSQTSYIDKMLSRYKMQNSKKGLLP----YRYGIHLSKEQCPKTPQEVEDMSNIPYVSV 183
+SQ++Y+ K+LS++ M+N P Y + S E C N P S+
Sbjct: 1141 YLSQSAYVKKILSKFNMENCNAVSTPLPSKINYELLNSDEDC-----------NTPCRSL 1200
Query: 184 VGSLMYAMLCTRPYICYLVGIVSRYQSNSGHDHWTTVKNILKYLRRTKDYMLVYGSKDLI 243
+G LMY MLCTRP + V I+SRY S + + W +K +L+YL+ T D L++ K+L
Sbjct: 1201 IGCLMYIMLCTRPDLTTAVNILSRYSSKNNSELWQNLKRVLRYLKGTIDMKLIF-KKNLA 1260
Query: 244 ----LTGHSDSDFQTDKDARKSTSRSVFTL-NGGAVVWRSIKQSCIVDSTMEAEYVA 289
+ G+ DSD+ + RKST+ +F + + + W + +Q+ + S+ EAEY+A
Sbjct: 1261 FENKIIGYVDSDWAGSEIDRKSTTGYLFKMFDFNLICWNTKRQNSVAASSTEAEYMA 1300
BLAST of Cmc10g0280411 vs. ExPASy Swiss-Prot
Match:
Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)
HSP 1 Score: 142.5 bits (358), Expect = 7.7e-33
Identity = 92/287 (32.06%), Postives = 144/287 (50.17%), Query Frame = 0
Query: 1 MVQPEGFIQNGQEQKVCKLQKSIYGLKQASRSWNIRFDTVIKSYGFEQNVDEPCVYKRII 60
M QP GF+ + VC+L+K+IYGLKQA R+W + T + + GF ++ + ++
Sbjct: 1064 MSQPPGFVDKDRPDYVCRLRKAIYGLKQAPRAWYVELRTYLLTVGFVNSISDTSLFVLQR 1123
Query: 61 NSIVAFLVLYVDDILLIENDVGHLTDIKKWLATQFQMKDLGNAQYVIGIQIVRNRKNKTL 120
+ ++++YVDDIL+ ND L L+ +F +K+ + Y +GI+ R + L
Sbjct: 1124 GRSIIYMLVYVDDILITGNDTVLLKHTLDALSQRFSVKEHEDLHYFLGIE--AKRVPQGL 1183
Query: 121 AMSQTSYIDKMLSRYKMQNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYVSVVGSL 180
+SQ Y +L+R M +K P L+ K P E Y +VGSL
Sbjct: 1184 HLSQRRYTLDLLARTNMLTAKPVATPMATSPKLTLHSGTKLPDPTE------YRGIVGSL 1243
Query: 181 MYAMLCTRPYICYLVGIVSRYQSNSGHDHWTTVKNILKYLRRTKDY-MLVYGSKDLILTG 240
Y + TRP + Y V +S+Y DHW +K +L+YL T D+ + + L L
Sbjct: 1244 QY-LAFTRPDLSYAVNRLSQYMHMPTDDHWNALKRVLRYLAGTPDHGIFLKKGNTLSLHA 1303
Query: 241 HSDSDFQTDKDARKSTSRSVFTLNGGAVVWRSIKQSCIVDSTMEAEY 287
+SD+D+ D D ST+ + L + W S KQ +V S+ EAEY
Sbjct: 1304 YSDADWAGDTDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEY 1341
BLAST of Cmc10g0280411 vs. ExPASy Swiss-Prot
Match:
Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)
HSP 1 Score: 134.4 bits (337), Expect = 2.1e-30
Identity = 94/287 (32.75%), Postives = 142/287 (49.48%), Query Frame = 0
Query: 1 MVQPEGFIQNGQEQKVCKLQKSIYGLKQASRSWNIRFDTVIKSYGFEQNVDEPCVYKRII 60
M QP GFI + VCKL+K++YGLKQA R+W + + + GF +V + ++
Sbjct: 1081 MSQPPGFIDKDRPNYVCKLRKALYGLKQAPRAWYVELRNYLLTIGFVNSVSDTSLFVLQR 1140
Query: 61 NSIVAFLVLYVDDILLIENDVGHLTDIKKWLATQFQMKDLGNAQYVIGIQIVRNRKNKTL 120
+ ++++YVDDIL+ ND L + L+ +F +KD Y +GI+ R L
Sbjct: 1141 GKSIVYMLVYVDDILITGNDPTLLHNTLDNLSQRFSVKDHEELHYFLGIE--AKRVPTGL 1200
Query: 121 AMSQTSYIDKMLSRYKMQNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYVSVVGSL 180
+SQ YI +L+R M +K P LS K E Y +VGSL
Sbjct: 1201 HLSQRRYILDLLARTNMITAKPVTTPMAPSPKLSLYSGTKLTDPTE------YRGIVGSL 1260
Query: 181 MYAMLCTRPYICYLVGIVSRYQSNSGHDHWTTVKNILKYLRRTKDY-MLVYGSKDLILTG 240
Y + TRP I Y V +S++ +H +K IL+YL T ++ + + L L
Sbjct: 1261 QY-LAFTRPDISYAVNRLSQFMHMPTEEHLQALKRILRYLAGTPNHGIFLKKGNTLSLHA 1320
Query: 241 HSDSDFQTDKDARKSTSRSVFTLNGGAVVWRSIKQSCIVDSTMEAEY 287
+SD+D+ DKD ST+ + L + W S KQ +V S+ EAEY
Sbjct: 1321 YSDADWAGDKDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEY 1358
BLAST of Cmc10g0280411 vs. ExPASy Swiss-Prot
Match:
P25600 (Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY5A PE=5 SV=2)
HSP 1 Score: 114.0 bits (284), Expect = 2.9e-24
Identity = 86/291 (29.55%), Postives = 132/291 (45.36%), Query Frame = 0
Query: 3 QPEGFIQNGQEQKVCKLQKSIYGLKQASRSWNIRFDTVIKSYGFEQNVDEPCVYKRIINS 62
QP GF+ V +L +YGLKQA WN + +K GF ++ E +Y R +
Sbjct: 20 QPPGFVNERNPDYVWELYGGMYGLKQAPLLWNEHINNTLKKIGFCRHEGEHGLYFRSTSD 79
Query: 63 IVAFLVLYVDDILLIENDVGHLTDIKKWLATQFQMKDLGNAQYVIGIQIVRNRKNKTLAM 122
++ +YVDD+L+ +K+ L + MKDLG +G+ I N + +
Sbjct: 80 GPIYIAVYVDDLLVAAPSPKIYDRVKQELTKLYSMKDLGKVDKFLGLNI-HQSSNGDITL 139
Query: 123 SQTSYIDKMLSRYKMQNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYVSVVGSLMY 182
S YI K S ++ K P + SK T ++D++ PY S+VG L++
Sbjct: 140 SLQDYIAKAASESEINTFKLTQTP----LCNSKPLFETTSPHLKDIT--PYQSIVGQLLF 199
Query: 183 AMLCTRPYICYLVGIVSRYQSNSGHDHWTTVKNILKYLRRTKDYMLVYGS-KDLILTGHS 242
RP I Y V ++SR+ H + + +L+YL T+ L Y S L LT +
Sbjct: 200 CANTGRPDISYPVSLLSRFLREPRAIHLESARRVLRYLYTTRSMCLKYRSGSQLALTVYC 259
Query: 243 DSDFQTDKDARKSTSRSVFTLNGGAVVWRSIKQSCIVD-STMEAEYVAAQK 292
D+ D ST V L G V W S K ++ + EAEY+ A +
Sbjct: 260 DASHGAIHDLPHSTGGYVTLLAGAPVTWSSKKLKGVIPVPSTEAEYITASE 303
BLAST of Cmc10g0280411 vs. ExPASy TrEMBL
Match:
A0A5D3CI71 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold73G00330 PE=4 SV=1)
HSP 1 Score: 523.1 bits (1346), Expect = 7.7e-145
Identity = 257/289 (88.93%), Postives = 270/289 (93.43%), Query Frame = 0
Query: 1 MVQPEGFIQNGQEQKVCKLQKSIYGLKQASRSWNIRFDTVIKSYGFEQNVDEPCVYKRII 60
MVQPEGFIQ GQEQKVCKL+KSIYGLKQ +RSWNIRFDT IKSYGFEQNVDEPCVYKR I
Sbjct: 1 MVQPEGFIQKGQEQKVCKLKKSIYGLKQVARSWNIRFDTAIKSYGFEQNVDEPCVYKRFI 60
Query: 61 NSIVAFLVLYVDDILLIENDVGHLTDIKKWLATQFQMKDLGNAQYVIGIQIVRNRKNKTL 120
N+ VAFL+LYVDDILLI NDVGHLTDIK+WLATQFQMKDLGNAQYV+GIQIVRN KNKTL
Sbjct: 61 NATVAFLLLYVDDILLIGNDVGHLTDIKEWLATQFQMKDLGNAQYVLGIQIVRNGKNKTL 120
Query: 121 AMSQTSYIDKMLSRYKMQNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYVSVVGSL 180
AMSQTSYIDKMLSRYKMQNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPY S +GSL
Sbjct: 121 AMSQTSYIDKMLSRYKMQNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASAIGSL 180
Query: 181 MYAMLCTRPYICYLVGIVSRYQSNSGHDHWTTVKNILKYLRRTKDYMLVYGSKDLILTGH 240
MYAMLCTR ICY VGIV+RYQSN G DHWT VKNILKYLRRTKDYMLVYGSKDLILTG+
Sbjct: 181 MYAMLCTRVDICYSVGIVNRYQSNPGRDHWTAVKNILKYLRRTKDYMLVYGSKDLILTGY 240
Query: 241 SDSDFQTDKDARKSTSRSVFTLNGGAVVWRSIKQSCIVDSTMEAEYVAA 290
+DSDFQTDKDARKSTS S+FTLN GAVVW+SIKQSCI STMEA+YVAA
Sbjct: 241 TDSDFQTDKDARKSTSGSIFTLNEGAVVWKSIKQSCIAHSTMEAKYVAA 289
BLAST of Cmc10g0280411 vs. ExPASy TrEMBL
Match:
A0A5D3BX45 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1369G00740 PE=4 SV=1)
HSP 1 Score: 515.4 bits (1326), Expect = 1.6e-142
Identity = 257/288 (89.24%), Postives = 264/288 (91.67%), Query Frame = 0
Query: 1 MVQPEGFIQNGQEQKVCKLQKSIYGLKQASRSWNIRFDTVIKSYGFEQNVDEPCVYKRII 60
MVQPE FIQ GQEQK+CKLQKSIYGLKQASRS NIRFDT IKSYG EQNVDEPCVYKRI+
Sbjct: 356 MVQPERFIQKGQEQKICKLQKSIYGLKQASRSCNIRFDTAIKSYGLEQNVDEPCVYKRIM 415
Query: 61 NSIVAFLVLYVDDILLIENDVGHLTDIKKWLATQFQMKDLGNAQYVIGIQIVRNRKNKTL 120
NS VAFLVLYVDDILLI NDVGHL DIKKWLA QFQMKDLGNAQYV+G+QIVRNRKNKTL
Sbjct: 416 NSTVAFLVLYVDDILLIGNDVGHLADIKKWLAMQFQMKDLGNAQYVLGVQIVRNRKNKTL 475
Query: 121 AMSQTSYIDKMLSRYKMQNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYVSVVGSL 180
AMSQTSYIDKMLSRYKM NSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPY S VGSL
Sbjct: 476 AMSQTSYIDKMLSRYKMHNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASAVGSL 535
Query: 181 MYAMLCTRPYICYLVGIVSRYQSNSGHDHWTTVKNILKYLRRTKDYMLVYGSKDLILTGH 240
MY MLCTRP ICY VGIVSR QS G DHWTTVKNILKYLRRTKDYMLVYGSKDLILTG+
Sbjct: 536 MYVMLCTRPNICYSVGIVSRCQSKPGRDHWTTVKNILKYLRRTKDYMLVYGSKDLILTGY 595
Query: 241 SDSDFQTDKDARKSTSRSVFTLNGGAVVWRSIKQSCIVDSTMEAEYVA 289
+D FQTDKDARKSTS VFT+NGGAVVWRSIKQSCI DSTMEAEYVA
Sbjct: 596 TDFYFQTDKDARKSTSGLVFTMNGGAVVWRSIKQSCIADSTMEAEYVA 643
BLAST of Cmc10g0280411 vs. ExPASy TrEMBL
Match:
E2GK51 (Gag/pol protein (Fragment) OS=Bryonia dioica OX=3652 PE=4 SV=1)
HSP 1 Score: 513.8 bits (1322), Expect = 4.7e-142
Identity = 250/289 (86.51%), Postives = 269/289 (93.08%), Query Frame = 0
Query: 1 MVQPEGFIQNGQEQKVCKLQKSIYGLKQASRSWNIRFDTVIKSYGFEQNVDEPCVYKRII 60
MVQPEGFI QEQKVCKLQKSIYGLKQASRSWNIRFDT IKSYGFEQNVDEPCVYK+I+
Sbjct: 932 MVQPEGFIAQDQEQKVCKLQKSIYGLKQASRSWNIRFDTAIKSYGFEQNVDEPCVYKKIV 991
Query: 61 NSIVAFLVLYVDDILLIENDVGHLTDIKKWLATQFQMKDLGNAQYVIGIQIVRNRKNKTL 120
NS+VAFL+LYVDDILLI NDV +LTD+KKWL TQFQMKDLG AQY++GIQIVRNRKNKTL
Sbjct: 992 NSVVAFLILYVDDILLIGNDVEYLTDVKKWLNTQFQMKDLGEAQYILGIQIVRNRKNKTL 1051
Query: 121 AMSQTSYIDKMLSRYKMQNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYVSVVGSL 180
AMSQ SYIDK+LSRYKMQNSKKG LP+R+GIHLSKEQCPKTPQEVEDM NIPY S VGSL
Sbjct: 1052 AMSQASYIDKVLSRYKMQNSKKGQLPFRHGIHLSKEQCPKTPQEVEDMRNIPYSSAVGSL 1111
Query: 181 MYAMLCTRPYICYLVGIVSRYQSNSGHDHWTTVKNILKYLRRTKDYMLVYGSKDLILTGH 240
MYAMLCTRP ICY VGIVSRYQSN G DHWT VKNILKYLRRT++YMLVYG+KDLILTG+
Sbjct: 1112 MYAMLCTRPDICYSVGIVSRYQSNPGRDHWTAVKNILKYLRRTRNYMLVYGAKDLILTGY 1171
Query: 241 SDSDFQTDKDARKSTSRSVFTLNGGAVVWRSIKQSCIVDSTMEAEYVAA 290
+DSDFQ+DKDARKSTS SVFTLNGGAVVWRS+KQ+CI DSTMEAEYVAA
Sbjct: 1172 TDSDFQSDKDARKSTSGSVFTLNGGAVVWRSVKQTCIADSTMEAEYVAA 1220
BLAST of Cmc10g0280411 vs. ExPASy TrEMBL
Match:
A0A5A7V9B0 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold468G001330 PE=4 SV=1)
HSP 1 Score: 498.0 bits (1281), Expect = 2.7e-137
Identity = 252/309 (81.55%), Postives = 264/309 (85.44%), Query Frame = 0
Query: 1 MVQPEGFIQNGQEQKVCKLQKSIYGLKQASRSWNIRFDTVIKSYGFEQNVDEPCVYKRII 60
MVQPEG IQ GQEQKVCKLQKSIYGLKQASRSWNIRFD IKSYGF+QNV+EPCVYKRI
Sbjct: 384 MVQPEGLIQKGQEQKVCKLQKSIYGLKQASRSWNIRFDNAIKSYGFKQNVEEPCVYKRIT 443
Query: 61 NSIVAFLVLYVDDILLIENDVGHLTDIKKWLATQFQMKDLGNAQYVIGIQIVRNRKNKTL 120
NS VAFLVLYVD+ILLI NDV LTDIKKWLATQFQMKDLGNAQYV+GIQ VRNRKNKTL
Sbjct: 444 NSTVAFLVLYVDEILLIGNDVDRLTDIKKWLATQFQMKDLGNAQYVLGIQTVRNRKNKTL 503
Query: 121 AMSQTSYIDKM--------------------LSRYKMQNSKKGLLPYRYGIHLSKEQCPK 180
MSQTSYID + LSRYKMQNSKKGLL YRY IHLSKEQCPK
Sbjct: 504 TMSQTSYIDMLSRYKMQNSKKGLLSYRYEIHLSRYKMQNSKKGLLSYRYEIHLSKEQCPK 563
Query: 181 TPQEVEDMSNIPYVSVVGSLMYAMLCTRPYICYLVGIVSRYQSNSGHDHWTTVKNILKYL 240
TPQ+VED+SNIPY S V SLMYAMLCTRP ICY +GI+SRYQSN G DHWTTVKNILKYL
Sbjct: 564 TPQKVEDISNIPYASTVRSLMYAMLCTRPDICYSIGIISRYQSNPGRDHWTTVKNILKYL 623
Query: 241 RRTKDYMLVYGSKDLILTGHSDSDFQTDKDARKSTSRSVFTLNGGAVVWRSIKQSCIVDS 290
RRTKDYMLVYGSKDLILTG++DSDFQTDKD RKSTS SVFTLNGG VVWRSIKQSCI +S
Sbjct: 624 RRTKDYMLVYGSKDLILTGYTDSDFQTDKDGRKSTSGSVFTLNGGGVVWRSIKQSCIAES 683
BLAST of Cmc10g0280411 vs. ExPASy TrEMBL
Match:
A0A5D3DJL5 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1607G00880 PE=4 SV=1)
HSP 1 Score: 491.5 bits (1264), Expect = 2.5e-135
Identity = 247/289 (85.47%), Postives = 256/289 (88.58%), Query Frame = 0
Query: 1 MVQPEGFIQNGQEQKVCKLQKSIYGLKQASRSWNIRFDTVIKSYGFEQNVDEPCVYKRII 60
+V EG IQ GQEQKVCKLQKSIYGLKQASRSW+IRFDT IKSYG EQNVDE CVYKRI
Sbjct: 191 LVAKEGIIQKGQEQKVCKLQKSIYGLKQASRSWDIRFDTAIKSYGLEQNVDESCVYKRIF 250
Query: 61 NSIVAFLVLYVDDILLIENDVGHLTDIKKWLATQFQMKDLGNAQYVIGIQIVRNRKNKTL 120
NS VAFLV YVDDILLI NDVGHLTDIK+WLA QFQMK LGNA YV+ IQIVRNRKNKTL
Sbjct: 251 NSTVAFLVPYVDDILLIWNDVGHLTDIKQWLAMQFQMKYLGNAPYVLDIQIVRNRKNKTL 310
Query: 121 AMSQTSYIDKMLSRYKMQNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYVSVVGSL 180
AMSQTSYIDKMLSRYKMQNSKK LLPYRYGIHLSKEQCPKTPQEVEDMSNIPY +GSL
Sbjct: 311 AMSQTSYIDKMLSRYKMQNSKKCLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYAFAIGSL 370
Query: 181 MYAMLCTRPYICYLVGIVSRYQSNSGHDHWTTVKNILKYLRRTKDYMLVYGSKDLILTGH 240
MYAMLC RP ICY V IVS YQSN G DHWT VKNI+KYLRRTKDYM VYGSKDLILT +
Sbjct: 371 MYAMLCIRPDICYSVRIVSTYQSNPGRDHWTVVKNIIKYLRRTKDYMFVYGSKDLILTRY 430
Query: 241 SDSDFQTDKDARKSTSRSVFTLNGGAVVWRSIKQSCIVDSTMEAEYVAA 290
+DSDFQTDKDARKSTS SVF LNGGAVVWRSIKQSCI DSTME +YVAA
Sbjct: 431 TDSDFQTDKDARKSTSGSVFILNGGAVVWRSIKQSCIADSTMEVKYVAA 479
BLAST of Cmc10g0280411 vs. TAIR 10
Match:
AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )
HSP 1 Score: 123.6 bits (309), Expect = 2.6e-28
Identity = 82/274 (29.93%), Postives = 139/274 (50.73%), Query Frame = 0
Query: 16 VCKLQKSIYGLKQASRSWNIRFDTVIKSYGFEQNVDEPCVYKRIINSIVAFLVLYVDDIL 75
VC L+KSIYGLKQASR W ++F + +GF Q+ + + +I ++ +++YVDDI+
Sbjct: 229 VCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDII 288
Query: 76 LIENDVGHLTDIKKWLATQFQMKDLGNAQYVIGIQIVRNRKNKTLAMSQTSYIDKMLSRY 135
+ N+ + ++K L + F+++DLG +Y +G++I R+ + + Q Y +L
Sbjct: 289 ICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAAG--INICQRKYALDLLDET 348
Query: 136 KMQNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYVSVVGSLMYAMLCTRPYICYLV 195
+ K +P + S + + Y ++G LMY + TR I + V
Sbjct: 349 GLLGCKPSSVPMDPSVTFSAH------SGGDFVDAKAYRRLIGRLMYLQI-TRLDISFAV 408
Query: 196 GIVSRYQSNSGHDHWTTVKNILKYLRRTKDYMLVYGSK-DLILTGHSDSDFQTDKDARKS 255
+S++ H V IL Y++ T L Y S+ ++ L SD+ FQ+ KD R+S
Sbjct: 409 NKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRS 468
Query: 256 TSRSVFTLNGGAVVWRSIKQSCIVDSTMEAEYVA 289
T+ L + W+S KQ + S+ EAEY A
Sbjct: 469 TNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRA 493
BLAST of Cmc10g0280411 vs. TAIR 10
Match:
ATMG00810.1 (DNA/RNA polymerases superfamily protein )
HSP 1 Score: 78.6 bits (192), Expect = 9.7e-15
Identity = 69/226 (30.53%), Postives = 111/226 (49.12%), Query Frame = 0
Query: 66 FLVLYVDDILLIENDVGHLTDIKKWLATQFQMKDLGNAQYVIGIQIVRNRKNKTLAMSQT 125
+L+LYVDDILL + L + L++ F MKDLG Y +GIQI + L +SQT
Sbjct: 2 YLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSG--LFLSQT 61
Query: 126 SYIDKMLSRYKMQNSK--KGLLPYRYGIHLSKEQCPKTPQEVEDMSNIPYVSVVGSLMYA 185
Y +++L+ M + K LP + +S + P D S+ + S+VG+L Y
Sbjct: 62 KYAEQILNNAGMLDCKPMSTPLPLKLNSSVSTAKYP-------DPSD--FRSIVGALQYL 121
Query: 186 MLCTRPYICYLVGIVSRYQSNSGHDHWTTVKNILKYLRRTKDY-MLVYGSKDLILTGHSD 245
L TRP I Y V IV + + +K +L+Y++ T + + ++ + L + D
Sbjct: 122 TL-TRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCD 181
Query: 246 SDFQTDKDARKSTSRSVFTLNGGAVVWRSIKQSCIVDSTMEAEYVA 289
SD+ R+ST+ L + W + +Q + S+ E EY A
Sbjct: 182 SDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRA 215
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
P10978 | 4.2e-71 | 47.24 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... | [more] |
P04146 | 2.3e-37 | 33.67 | Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3 | [more] |
Q9ZT94 | 7.7e-33 | 32.06 | Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... | [more] |
Q94HW2 | 2.1e-30 | 32.75 | Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... | [more] |
P25600 | 2.9e-24 | 29.55 | Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain AT... | [more] |
Match Name | E-value | Identity | Description | |
A0A5D3CI71 | 7.7e-145 | 88.93 | Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold73G00330... | [more] |
A0A5D3BX45 | 1.6e-142 | 89.24 | Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1369G007... | [more] |
E2GK51 | 4.7e-142 | 86.51 | Gag/pol protein (Fragment) OS=Bryonia dioica OX=3652 PE=4 SV=1 | [more] |
A0A5A7V9B0 | 2.7e-137 | 81.55 | Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold468G0013... | [more] |
A0A5D3DJL5 | 2.5e-135 | 85.47 | Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1607G008... | [more] |
Match Name | E-value | Identity | Description | |
AT4G23160.1 | 2.6e-28 | 29.93 | cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | [more] |
ATMG00810.1 | 9.7e-15 | 30.53 | DNA/RNA polymerases superfamily protein | [more] |