Cmc10g0280231 (gene) Melon (Charmono) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTCTAATTTTCCATTCCTCTGTTCCTCTTGAATTTTTTCCTTACGCCTTCTCCACTGCAGTCTTTCTTATTAATCGAATGCCCTCTTCCTCACTTAAAATGTTATCACCATTTGAAATGCTTTTTGGTTATACTCCTGATTTGCATCATTTAGAAGTTTTTGGATGTGCATGTTACCCCCTTCTCAAGCCTTACACCAAACACAAACTTGAACCAAAAACCACCCAACATGTATTTTTAGGCTATCCTCATAACTTCAAAGCCTATATTTGTTACAACCCATTAACCAAACAAACTATAGTTTCATGA ATGTCTCTAATTTTCCATTCCTCTGTTCCTCTTGAATTTTTTCCTTACGCCTTCTCCACTGCAGTCTTTCTTATTAATCGAATGCCCTCTTCCTCACTTAAAATGTTATCACCATTTGAAATGCTTTTTGGTTATACTCCTGATTTGCATCATTTAGAAGTTTTTGGATGTGCATGTTACCCCCTTCTCAAGCCTTACACCAAACACAAACTTGAACCAAAAACCACCCAACATGTATTTTTAGGCTATCCTCATAACTTCAAAGCCTATATTTGTTACAACCCATTAACCAAACAAACTATAGTTTCATGA ATGTCTCTAATTTTCCATTCCTCTGTTCCTCTTGAATTTTTTCCTTACGCCTTCTCCACTGCAGTCTTTCTTATTAATCGAATGCCCTCTTCCTCACTTAAAATGTTATCACCATTTGAAATGCTTTTTGGTTATACTCCTGATTTGCATCATTTAGAAGTTTTTGGATGTGCATGTTACCCCCTTCTCAAGCCTTACACCAAACACAAACTTGAACCAAAAACCACCCAACATGTATTTTTAGGCTATCCTCATAACTTCAAAGCCTATATTTGTTACAACCCATTAACCAAACAAACTATAGTTTCATGA MSLIFHSSVPLEFFPYAFSTAVFLINRMPSSSLKMLSPFEMLFGYTPDLHHLEVFGCACYPLLKPYTKHKLEPKTTQHVFLGYPHNFKAYICYNPLTKQTIVS Homology
BLAST of Cmc10g0280231 vs. NCBI nr
Match: CAA7051267.1 (unnamed protein product [Microthlaspi erraticum]) HSP 1 Score: 126.3 bits (316), Expect = 1.5e-25 Identity = 54/103 (52.43%), Postives = 76/103 (73.79%), Query Frame = 0
BLAST of Cmc10g0280231 vs. NCBI nr
Match: TKR89925.1 (hypothetical protein D5086_0000238180 [Populus alba]) HSP 1 Score: 122.1 bits (305), Expect = 2.8e-24 Identity = 52/103 (50.49%), Postives = 75/103 (72.82%), Query Frame = 0
BLAST of Cmc10g0280231 vs. NCBI nr
Match: OMO55025.1 (Integrase, catalytic core [Corchorus capsularis]) HSP 1 Score: 119.4 bits (298), Expect = 1.8e-23 Identity = 52/103 (50.49%), Postives = 78/103 (75.73%), Query Frame = 0
BLAST of Cmc10g0280231 vs. NCBI nr
Match: TQD93593.1 (hypothetical protein C1H46_020801 [Malus baccata]) HSP 1 Score: 119.0 bits (297), Expect = 2.4e-23 Identity = 53/103 (51.46%), Postives = 76/103 (73.79%), Query Frame = 0
BLAST of Cmc10g0280231 vs. NCBI nr
Match: PKI52922.1 (hypothetical protein CRG98_026753 [Punica granatum]) HSP 1 Score: 119.0 bits (297), Expect = 2.4e-23 Identity = 52/103 (50.49%), Postives = 74/103 (71.84%), Query Frame = 0
BLAST of Cmc10g0280231 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1) HSP 1 Score: 113.6 bits (283), Expect = 1.3e-24 Identity = 50/103 (48.54%), Postives = 74/103 (71.84%), Query Frame = 0
BLAST of Cmc10g0280231 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1) HSP 1 Score: 112.1 bits (279), Expect = 3.8e-24 Identity = 49/92 (53.26%), Postives = 68/92 (73.91%), Query Frame = 0
BLAST of Cmc10g0280231 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3) HSP 1 Score: 50.4 bits (119), Expect = 1.4e-05 Identity = 32/96 (33.33%), Postives = 52/96 (54.17%), Query Frame = 0
BLAST of Cmc10g0280231 vs. ExPASy TrEMBL
Match: A0A2N9H1I5 (Integrase catalytic domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS33383 PE=4 SV=1) HSP 1 Score: 130.2 bits (326), Expect = 5.0e-27 Identity = 59/103 (57.28%), Postives = 78/103 (75.73%), Query Frame = 0
BLAST of Cmc10g0280231 vs. ExPASy TrEMBL
Match: A0A2N9I1C1 (Integrase catalytic domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS45685 PE=4 SV=1) HSP 1 Score: 130.2 bits (326), Expect = 5.0e-27 Identity = 59/103 (57.28%), Postives = 78/103 (75.73%), Query Frame = 0
BLAST of Cmc10g0280231 vs. ExPASy TrEMBL
Match: A0A2N9HPM6 (Integrase catalytic domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS41461 PE=4 SV=1) HSP 1 Score: 130.2 bits (326), Expect = 5.0e-27 Identity = 59/103 (57.28%), Postives = 78/103 (75.73%), Query Frame = 0
BLAST of Cmc10g0280231 vs. ExPASy TrEMBL
Match: A0A2N9G1Z9 (Integrase catalytic domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS24689 PE=4 SV=1) HSP 1 Score: 127.1 bits (318), Expect = 4.2e-26 Identity = 57/94 (60.64%), Postives = 74/94 (78.72%), Query Frame = 0
BLAST of Cmc10g0280231 vs. ExPASy TrEMBL
Match: A0A2N9EUP4 (Integrase catalytic domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS6395 PE=4 SV=1) HSP 1 Score: 127.1 bits (318), Expect = 4.2e-26 Identity = 57/94 (60.64%), Postives = 74/94 (78.72%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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