Cmc10g0280001 (gene) Melon (Charmono) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTAGTCGCCCCCACGTCTTCAAAATCCTACATTATGTATATATAAATTCCAATTCCCCTTTGCTTTGCCCCCATCAAAACGAAAACAAACACATACAACTGATACACAAACAAAAATGTCAACCAAAAACCTCCTCTCCCTCTCCTTTCTCCTCCTCCTCCTCCTCCACATTGCTTCCGCCAACCCTGTCCGACCCCCCCACAAACCCCTCTCGGTGGCAGTCGAAGGATTGGTCTACTGCCAAAATTGCAAGAAAGTAGGGACCTGGTCGTTGACGGAGGCCAAGCCAATCAGCGGAGCGAAGATCAGTGTGATTTGCAAGAACCATAACGACCAAGTAAAGTTCTACAAGGTGTATCAAACCAACAAAGATGGTTACTTTTACGCTGAGTTGGTTGGGTACCAAATGAACCATCCGGTTCTCGACCACCCGCTTCAAGCTTGTAAAGTCAAGCCTGTTTCTTCCCCACTTTCCGACTGTAACCTTTTAACCAATCTCAACTATGGTCTCACTGGAGCCCCACTCCGGTACGAGAAAAAGTTTGTCCTCGGCCACAATTATAGGGCCGCTGTTTACGCCGCCGGGCCACTGGCTTTCCACCCTCAGAAATGCCTCTAGATCATTCAGAAATATTATACATTTTAAACTAATTATTTATTCTCTCTTCGTGTGGTTTATGTGTTTTGTTTTGTTATTATTTTTATTTTGGGGTTTGGAATTTGTTTGGTGCTAAATGTAGTTTGATGTGCCTTATTGGATGATGTAGCAATGGGAATATATATATATATATTATATATATCTCTAGTAATGAGAATTGGGATGTTTTGGTTAAATGAAATCATGTGGTTTATGTTTTTTTTTTTCATCAAAGCGCTGA TTAGTCGCCCCCACGTCTTCAAAATCCTACATTATGTATATATAAATTCCAATTCCCCTTTGCTTTGCCCCCATCAAAACGAAAACAAACACATACAACTGATACACAAACAAAAATGTCAACCAAAAACCTCCTCTCCCTCTCCTTTCTCCTCCTCCTCCTCCTCCACATTGCTTCCGCCAACCCTGTCCGACCCCCCCACAAACCCCTCTCGGTGGCAGTCGAAGGATTGGTCTACTGCCAAAATTGCAAGAAAGTAGGGACCTGGTCGTTGACGGAGGCCAAGCCAATCAGCGGAGCGAAGATCAGTGTGATTTGCAAGAACCATAACGACCAAGTAAAGTTCTACAAGGTGTATCAAACCAACAAAGATGGTTACTTTTACGCTGAGTTGGTTGGGTACCAAATGAACCATCCGGTTCTCGACCACCCGCTTCAAGCTTGTAAAGTCAAGCCTGTTTCTTCCCCACTTTCCGACTGTAACCTTTTAACCAATCTCAACTATGGTCTCACTGGAGCCCCACTCCGGTACGAGAAAAAGTTTGTCCTCGGCCACAATTATAGGGCCGCTGTTTACGCCGCCGGGCCACTGGCTTTCCACCCTCAGAAATGCCTCTAGATCATTCAGAAATATTATACATTTTAAACTAATTATTTATTCTCTCTTCGTGTGGTTTATGTGTTTTGTTTTGTTATTATTTTTATTTTGGGGTTTGGAATTTGTTTGGTGCTAAATGTAGTTTGATGTGCCTTATTGGATGATGTAGCAATGGGAATATATATATATATATTATATATATCTCTAGTAATGAGAATTGGGATGTTTTGGTTAAATGAAATCATGTGGTTTATGTTTTTTTTTTTCATCAAAGCGCTGA ATGTCAACCAAAAACCTCCTCTCCCTCTCCTTTCTCCTCCTCCTCCTCCTCCACATTGCTTCCGCCAACCCTGTCCGACCCCCCCACAAACCCCTCTCGGTGGCAGTCGAAGGATTGGTCTACTGCCAAAATTGCAAGAAAGTAGGGACCTGGTCGTTGACGGAGGCCAAGCCAATCAGCGGAGCGAAGATCAGTGTGATTTGCAAGAACCATAACGACCAAGTAAAGTTCTACAAGGTGTATCAAACCAACAAAGATGGTTACTTTTACGCTGAGTTGGTTGGGTACCAAATGAACCATCCGGTTCTCGACCACCCGCTTCAAGCTTGTAAAGTCAAGCCTGTTTCTTCCCCACTTTCCGACTGTAACCTTTTAACCAATCTCAACTATGGTCTCACTGGAGCCCCACTCCGGTACGAGAAAAAGTTTGTCCTCGGCCACAATTATAGGGCCGCTGTTTACGCCGCCGGGCCACTGGCTTTCCACCCTCAGAAATGCCTCTAG MSTKNLLSLSFLLLLLLHIASANPVRPPHKPLSVAVEGLVYCQNCKKVGTWSLTEAKPISGAKISVICKNHNDQVKFYKVYQTNKDGYFYAELVGYQMNHPVLDHPLQACKVKPVSSPLSDCNLLTNLNYGLTGAPLRYEKKFVLGHNYRAAVYAAGPLAFHPQKCL Homology
BLAST of Cmc10g0280001 vs. NCBI nr
Match: XP_008454812.1 (PREDICTED: non-classical arabinogalactan protein 30 [Cucumis melo]) HSP 1 Score: 349.0 bits (894), Expect = 2.3e-92 Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 0
BLAST of Cmc10g0280001 vs. NCBI nr
Match: XP_004148198.3 (non-classical arabinogalactan protein 30 [Cucumis sativus] >KGN50679.1 hypothetical protein Csa_005862 [Cucumis sativus]) HSP 1 Score: 328.9 bits (842), Expect = 2.5e-86 Identity = 158/167 (94.61%), Postives = 164/167 (98.20%), Query Frame = 0
BLAST of Cmc10g0280001 vs. NCBI nr
Match: XP_038893345.1 (non-classical arabinogalactan protein 30 [Benincasa hispida]) HSP 1 Score: 288.5 bits (737), Expect = 3.7e-74 Identity = 139/167 (83.23%), Postives = 154/167 (92.22%), Query Frame = 0
BLAST of Cmc10g0280001 vs. NCBI nr
Match: KAG6599980.1 (Non-classical arabinogalactan protein 30, partial [Cucurbita argyrosperma subsp. sororia] >KAG7030660.1 Non-classical arabinogalactan protein 30, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 287.0 bits (733), Expect = 1.1e-73 Identity = 134/167 (80.24%), Postives = 155/167 (92.81%), Query Frame = 0
BLAST of Cmc10g0280001 vs. NCBI nr
Match: XP_022942759.1 (non-classical arabinogalactan protein 30 [Cucurbita moschata]) HSP 1 Score: 286.6 bits (732), Expect = 1.4e-73 Identity = 134/167 (80.24%), Postives = 154/167 (92.22%), Query Frame = 0
BLAST of Cmc10g0280001 vs. ExPASy Swiss-Prot
Match: P93013 (Non-classical arabinogalactan protein 30 OS=Arabidopsis thaliana OX=3702 GN=AGP30 PE=2 SV=1) HSP 1 Score: 72.4 bits (176), Expect = 5.5e-12 Identity = 45/145 (31.03%), Postives = 75/145 (51.72%), Query Frame = 0
BLAST of Cmc10g0280001 vs. ExPASy Swiss-Prot
Match: Q9FZA2 (Non-classical arabinogalactan protein 31 OS=Arabidopsis thaliana OX=3702 GN=AGP31 PE=1 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 5.1e-10 Identity = 48/145 (33.10%), Postives = 70/145 (48.28%), Query Frame = 0
BLAST of Cmc10g0280001 vs. ExPASy Swiss-Prot
Match: Q9LZJ7 (Proline-rich protein 3 OS=Arabidopsis thaliana OX=3702 GN=PRP3 PE=2 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 3.7e-08 Identity = 45/146 (30.82%), Postives = 66/146 (45.21%), Query Frame = 0
BLAST of Cmc10g0280001 vs. ExPASy Swiss-Prot
Match: Q03211 (Pistil-specific extensin-like protein OS=Nicotiana tabacum OX=4097 PE=2 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 5.3e-07 Identity = 39/119 (32.77%), Postives = 54/119 (45.38%), Query Frame = 0
BLAST of Cmc10g0280001 vs. ExPASy Swiss-Prot
Match: O81417 (Protein SEED AND ROOT HAIR PROTECTIVE PROTEIN OS=Arabidopsis thaliana OX=3702 GN=SRPP PE=1 SV=1) HSP 1 Score: 46.6 bits (109), Expect = 3.2e-04 Identity = 35/137 (25.55%), Postives = 61/137 (44.53%), Query Frame = 0
BLAST of Cmc10g0280001 vs. ExPASy TrEMBL
Match: A0A1S3BZJ5 (non-classical arabinogalactan protein 30 OS=Cucumis melo OX=3656 GN=LOC103495126 PE=4 SV=1) HSP 1 Score: 349.0 bits (894), Expect = 1.1e-92 Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 0
BLAST of Cmc10g0280001 vs. ExPASy TrEMBL
Match: A0A0A0KP60 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G211030 PE=4 SV=1) HSP 1 Score: 328.9 bits (842), Expect = 1.2e-86 Identity = 158/167 (94.61%), Postives = 164/167 (98.20%), Query Frame = 0
BLAST of Cmc10g0280001 vs. ExPASy TrEMBL
Match: A0A6J1FS98 (non-classical arabinogalactan protein 30 OS=Cucurbita moschata OX=3662 GN=LOC111447700 PE=4 SV=1) HSP 1 Score: 286.6 bits (732), Expect = 6.8e-74 Identity = 134/167 (80.24%), Postives = 154/167 (92.22%), Query Frame = 0
BLAST of Cmc10g0280001 vs. ExPASy TrEMBL
Match: A0A6J1K278 (non-classical arabinogalactan protein 30 OS=Cucurbita maxima OX=3661 GN=LOC111491753 PE=4 SV=1) HSP 1 Score: 282.0 bits (720), Expect = 1.7e-72 Identity = 132/167 (79.04%), Postives = 154/167 (92.22%), Query Frame = 0
BLAST of Cmc10g0280001 vs. ExPASy TrEMBL
Match: A0A6J1CYI2 (non-classical arabinogalactan protein 30 OS=Momordica charantia OX=3673 GN=LOC111015957 PE=4 SV=1) HSP 1 Score: 246.5 bits (628), Expect = 7.8e-62 Identity = 113/166 (68.07%), Postives = 137/166 (82.53%), Query Frame = 0
BLAST of Cmc10g0280001 vs. TAIR 10
Match: AT5G05500.1 (Pollen Ole e 1 allergen and extensin family protein ) HSP 1 Score: 181.8 bits (460), Expect = 4.5e-46 Identity = 88/170 (51.76%), Postives = 111/170 (65.29%), Query Frame = 0
BLAST of Cmc10g0280001 vs. TAIR 10
Match: AT2G34700.1 (Pollen Ole e 1 allergen and extensin family protein ) HSP 1 Score: 85.1 bits (209), Expect = 5.8e-17 Identity = 55/165 (33.33%), Postives = 87/165 (52.73%), Query Frame = 0
BLAST of Cmc10g0280001 vs. TAIR 10
Match: AT2G47530.1 (Pollen Ole e 1 allergen and extensin family protein ) HSP 1 Score: 73.2 bits (178), Expect = 2.3e-13 Identity = 48/147 (32.65%), Postives = 72/147 (48.98%), Query Frame = 0
BLAST of Cmc10g0280001 vs. TAIR 10
Match: AT2G33790.1 (arabinogalactan protein 30 ) HSP 1 Score: 72.4 bits (176), Expect = 3.9e-13 Identity = 45/145 (31.03%), Postives = 75/145 (51.72%), Query Frame = 0
BLAST of Cmc10g0280001 vs. TAIR 10
Match: AT1G28290.1 (arabinogalactan protein 31 ) HSP 1 Score: 65.9 bits (159), Expect = 3.6e-11 Identity = 48/145 (33.10%), Postives = 70/145 (48.28%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
Relationships
The following mRNA feature(s) are a part of this gene:
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