Cmc10g0279621 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc10g0279621
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr10: 17047001 .. 17047555 (-)
RNA-Seq Expression	Cmc10g0279621
Synteny	Cmc10g0279621

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGCAGAGGAGGTGGCTCGAGTTGGTGAAAGACTATGACTGCGAGATTCTGTACCACCCAGGTAAAGCAAATGTAGTGGCTGACGCGCTGAGTAAGAAGGTTGCACATTCAGCGGCGCTAATCACCAAGCAAGCCCTCTTACTCAGAGATTTTGAGAGAGCCGAGATTGCAGTCTCAGTAGGAGAGATTACCTCACAGTTGGCTCAGTTGTCAGTTCAGCCAACCTTGAGGCAAAAGATTATCGTTGCTCAGCTGAATGATCCTTACTTGGTCGAGAAGCGTCGTTTGGTAGAGACAGGGCAAGGTGAGGACTTCTCCATATCCTCTGACGATGGACTTATGTTTGAAGGACGCCTATGTGTGCCGGAAGACAGCGCAGTCAAGACAGAGCTCTTGACTGAGGCTCACAGTTCTCCATTTACCATGCACCCTGGAAGTACGAAGATGTACCAGGACTTAAGGAGTGTCTATTGGTGGAGGAACATGAAGAGGGAAGTGGCAGATTTTGTCAGTAGGTGTTTGGTGTGCCAGCAGGTGAAGGCACCTAGATAG

mRNA sequence

ATGAGGCAGAGGAGGTGGCTCGAGTTGGTGAAAGACTATGACTGCGAGATTCTGTACCACCCAGGTAAAGCAAATGTAGTGGCTGACGCGCTGAGTAAGAAGGTTGCACATTCAGCGGCGCTAATCACCAAGCAAGCCCTCTTACTCAGAGATTTTGAGAGAGCCGAGATTGCAGTCTCAGTAGGAGAGATTACCTCACAGTTGGCTCAGTTGTCAGTTCAGCCAACCTTGAGGCAAAAGATTATCGTTGCTCAGCTGAATGATCCTTACTTGGTCGAGAAGCGTCGTTTGGTAGAGACAGGGCAAGGTGAGGACTTCTCCATATCCTCTGACGATGGACTTATGTTTGAAGGACGCCTATGTGTGCCGGAAGACAGCGCAGTCAAGACAGAGCTCTTGACTGAGGCTCACAGTTCTCCATTTACCATGCACCCTGGAAGTACGAAGATGTACCAGGACTTAAGGAGTGTCTATTGGTGGAGGAACATGAAGAGGGAAGTGGCAGATTTTGTCAGTAGGTGTTTGGTGTGCCAGCAGGTGAAGGCACCTAGATAG

Coding sequence (CDS)

ATGAGGCAGAGGAGGTGGCTCGAGTTGGTGAAAGACTATGACTGCGAGATTCTGTACCACCCAGGTAAAGCAAATGTAGTGGCTGACGCGCTGAGTAAGAAGGTTGCACATTCAGCGGCGCTAATCACCAAGCAAGCCCTCTTACTCAGAGATTTTGAGAGAGCCGAGATTGCAGTCTCAGTAGGAGAGATTACCTCACAGTTGGCTCAGTTGTCAGTTCAGCCAACCTTGAGGCAAAAGATTATCGTTGCTCAGCTGAATGATCCTTACTTGGTCGAGAAGCGTCGTTTGGTAGAGACAGGGCAAGGTGAGGACTTCTCCATATCCTCTGACGATGGACTTATGTTTGAAGGACGCCTATGTGTGCCGGAAGACAGCGCAGTCAAGACAGAGCTCTTGACTGAGGCTCACAGTTCTCCATTTACCATGCACCCTGGAAGTACGAAGATGTACCAGGACTTAAGGAGTGTCTATTGGTGGAGGAACATGAAGAGGGAAGTGGCAGATTTTGTCAGTAGGTGTTTGGTGTGCCAGCAGGTGAAGGCACCTAGATAG

Protein sequence

MRQRRWLELVKDYDCEILYHPGKANVVADALSKKVAHSAALITKQALLLRDFERAEIAVSVGEITSQLAQLSVQPTLRQKIIVAQLNDPYLVEKRRLVETGQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRNMKREVADFVSRCLVCQQVKAPR

Homology

[Close]

BLAST of Cmc10g0279621 vs. NCBI nr
Match: KAA0041490.1 (hypothetical protein E6C27_scaffold6G00780 [Cucumis melo var. makuwa])

HSP 1 Score: 357.8 bits (917), Expect = 5.5e-95
Identity = 178/184 (96.74%), Postives = 181/184 (98.37%), Query Frame = 0


Query: 1   MRQRRWLELVKDYDCEILYHPGKANVVADALSKKVAHSAALITKQALLLRDFERAEIAVS 60
           MR RRWLELVKDYDCEILYHPGKANVVADALS+KVAHSAALITKQA LLRDFERAEIAVS
Sbjct: 729 MRHRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQAPLLRDFERAEIAVS 788

Query: 61  VGEITSQLAQLSVQPTLRQKIIVAQLNDPYLVEKRRLVETGQGEDFSISSDDGLMFEGRL 120
           VGE+TSQLAQLSVQPTLRQ+IIVAQLNDPYLVEKRRLVETGQGEDFSIS DDGLMFEGRL
Sbjct: 789 VGEVTSQLAQLSVQPTLRQRIIVAQLNDPYLVEKRRLVETGQGEDFSISFDDGLMFEGRL 848

Query: 121 CVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRNMKREVADFVSRCLVCQQV 180
           CVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRNMKREVADFVSRCLVCQQV
Sbjct: 849 CVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRNMKREVADFVSRCLVCQQV 908

Query: 181 KAPR 185
           KAPR
Sbjct: 909 KAPR 912

[Close]

BLAST of Cmc10g0279621 vs. NCBI nr
Match: TYK24364.1 (putative polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 357.8 bits (917), Expect = 5.5e-95
Identity = 178/184 (96.74%), Postives = 181/184 (98.37%), Query Frame = 0


Query: 1   MRQRRWLELVKDYDCEILYHPGKANVVADALSKKVAHSAALITKQALLLRDFERAEIAVS 60
           MR RRWLELVKDYDCEILYHPGKANVVADALS+KVAHSAALITKQA LLRDFERAEIAVS
Sbjct: 729 MRHRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQAPLLRDFERAEIAVS 788

Query: 61  VGEITSQLAQLSVQPTLRQKIIVAQLNDPYLVEKRRLVETGQGEDFSISSDDGLMFEGRL 120
           VGE+TSQLAQLSVQPTLRQ+IIVAQLNDPYLVEKRRLVETGQGEDFSIS DDGLMFEGRL
Sbjct: 789 VGEVTSQLAQLSVQPTLRQRIIVAQLNDPYLVEKRRLVETGQGEDFSISFDDGLMFEGRL 848

Query: 121 CVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRNMKREVADFVSRCLVCQQV 180
           CVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRNMKREVADFVSRCLVCQQV
Sbjct: 849 CVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRNMKREVADFVSRCLVCQQV 908

Query: 181 KAPR 185
           KAPR
Sbjct: 909 KAPR 912

[Close]

BLAST of Cmc10g0279621 vs. NCBI nr
Match: KAA0050011.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 354.8 bits (909), Expect = 4.6e-94
Identity = 175/184 (95.11%), Postives = 181/184 (98.37%), Query Frame = 0


Query: 1   MRQRRWLELVKDYDCEILYHPGKANVVADALSKKVAHSAALITKQALLLRDFERAEIAVS 60
           MRQRRWLELVKDYDCE+LYHPGKANVVADALS+KVAHSAALITKQA LLRDFERAEIAVS
Sbjct: 664 MRQRRWLELVKDYDCEMLYHPGKANVVADALSRKVAHSAALITKQAPLLRDFERAEIAVS 723

Query: 61  VGEITSQLAQLSVQPTLRQKIIVAQLNDPYLVEKRRLVETGQGEDFSISSDDGLMFEGRL 120
           VGE+TSQLAQLSVQPTLRQ+IIVAQLNDPYLVEKRRLVETGQGEDFSISSDDGL FEGRL
Sbjct: 724 VGEVTSQLAQLSVQPTLRQRIIVAQLNDPYLVEKRRLVETGQGEDFSISSDDGLTFEGRL 783

Query: 121 CVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRNMKREVADFVSRCLVCQQV 180
           CVP+DSA+KTELLTE HSSPFTMHPGSTKMYQDLRSVYWWRNMKREVADFVSRCLVCQQV
Sbjct: 784 CVPKDSAIKTELLTEIHSSPFTMHPGSTKMYQDLRSVYWWRNMKREVADFVSRCLVCQQV 843

Query: 181 KAPR 185
           KAPR
Sbjct: 844 KAPR 847

[Close]

BLAST of Cmc10g0279621 vs. NCBI nr
Match: KAA0040547.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 354.4 bits (908), Expect = 6.0e-94
Identity = 175/184 (95.11%), Postives = 179/184 (97.28%), Query Frame = 0


Query: 1    MRQRRWLELVKDYDCEILYHPGKANVVADALSKKVAHSAALITKQALLLRDFERAEIAVS 60
            MRQRRWLELVKDYDCEILYHPGKANVVADALS+KVAHSA LITKQ  LLRDFERAEIAVS
Sbjct: 976  MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAVLITKQTPLLRDFERAEIAVS 1035

Query: 61   VGEITSQLAQLSVQPTLRQKIIVAQLNDPYLVEKRRLVETGQGEDFSISSDDGLMFEGRL 120
            VGE+TSQLAQLSVQPTLRQKII AQLNDPYLVEKRR+VETGQGEDFSISSDDGLMFEGRL
Sbjct: 1036 VGEVTSQLAQLSVQPTLRQKIIAAQLNDPYLVEKRRMVETGQGEDFSISSDDGLMFEGRL 1095

Query: 121  CVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRNMKREVADFVSRCLVCQQV 180
            CVPEDSAV+TELLTEAHSSPFTMHPGSTKMYQDLRSVYWWR MKREVADFVSRCLVCQQV
Sbjct: 1096 CVPEDSAVRTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKREVADFVSRCLVCQQV 1155

Query: 181  KAPR 185
            KAPR
Sbjct: 1156 KAPR 1159

[Close]

BLAST of Cmc10g0279621 vs. NCBI nr
Match: KAA0040942.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 354.4 bits (908), Expect = 6.0e-94
Identity = 175/184 (95.11%), Postives = 179/184 (97.28%), Query Frame = 0


Query: 1   MRQRRWLELVKDYDCEILYHPGKANVVADALSKKVAHSAALITKQALLLRDFERAEIAVS 60
           MRQRRWLELVKDYDCEILYHPGKANVVADALS+KVAHSAALITKQ  LLRDFERAEIAVS
Sbjct: 257 MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVS 316

Query: 61  VGEITSQLAQLSVQPTLRQKIIVAQLNDPYLVEKRRLVETGQGEDFSISSDDGLMFEGRL 120
           VGE+T+QLAQLSVQPTLRQKII AQLNDPYL EKRR+VETGQGEDFSISSDDGLMFEGRL
Sbjct: 317 VGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVETGQGEDFSISSDDGLMFEGRL 376

Query: 121 CVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRNMKREVADFVSRCLVCQQV 180
           CVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWR MKREVADFVSRCLVCQQV
Sbjct: 377 CVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKREVADFVSRCLVCQQV 436

Query: 181 KAPR 185
           KAPR
Sbjct: 437 KAPR 440

[Close]

BLAST of Cmc10g0279621 vs. ExPASy Swiss-Prot
Match: Q9UR07 (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 2.8e-09
Identity = 42/184 (22.83%), Postives = 86/184 (46.74%), Query Frame = 0


Query: 2   RQRRWLELVKDYDCEILYHPGKANVVADALSKKVAHSAALITKQALLLRDFERAEIAVSV 61
           R  RW   ++D++ EI Y PG AN +ADALS+       ++ +   + +D E   I    
Sbjct: 800 RLARWQLFLQDFNFEINYRPGSANHIADALSR-------IVDETEPIPKDSEDNSI---- 859

Query: 62  GEITSQLAQLSVQPTLRQKIIVAQLNDPYLV-----EKRRLVETGQGEDFSISSDDGLMF 121
               + + Q+S+    + +++    ND  L+     E +R+ E       +I   DGL+ 
Sbjct: 860 ----NFVNQISITDDFKNQVVTEYTNDTKLLNLLNNEDKRVEE-------NIQLKDGLLI 919

Query: 122 EGR--LCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRNMKREVADFVSRC 179
             +  + +P D+ +   ++ + H     +HPG   +   +   + W+ +++++ ++V  C
Sbjct: 920 NSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNC 961

[Close]

BLAST of Cmc10g0279621 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 2.8e-09
Identity = 42/184 (22.83%), Postives = 86/184 (46.74%), Query Frame = 0


Query: 2   RQRRWLELVKDYDCEILYHPGKANVVADALSKKVAHSAALITKQALLLRDFERAEIAVSV 61
           R  RW   ++D++ EI Y PG AN +ADALS+       ++ +   + +D E   I    
Sbjct: 800 RLARWQLFLQDFNFEINYRPGSANHIADALSR-------IVDETEPIPKDSEDNSI---- 859

Query: 62  GEITSQLAQLSVQPTLRQKIIVAQLNDPYLV-----EKRRLVETGQGEDFSISSDDGLMF 121
               + + Q+S+    + +++    ND  L+     E +R+ E       +I   DGL+ 
Sbjct: 860 ----NFVNQISITDDFKNQVVTEYTNDTKLLNLLNNEDKRVEE-------NIQLKDGLLI 919

Query: 122 EGR--LCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRNMKREVADFVSRC 179
             +  + +P D+ +   ++ + H     +HPG   +   +   + W+ +++++ ++V  C
Sbjct: 920 NSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNC 961

[Close]

BLAST of Cmc10g0279621 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 2.8e-09
Identity = 42/184 (22.83%), Postives = 86/184 (46.74%), Query Frame = 0


Query: 2   RQRRWLELVKDYDCEILYHPGKANVVADALSKKVAHSAALITKQALLLRDFERAEIAVSV 61
           R  RW   ++D++ EI Y PG AN +ADALS+       ++ +   + +D E   I    
Sbjct: 800 RLARWQLFLQDFNFEINYRPGSANHIADALSR-------IVDETEPIPKDSEDNSI---- 859

Query: 62  GEITSQLAQLSVQPTLRQKIIVAQLNDPYLV-----EKRRLVETGQGEDFSISSDDGLMF 121
               + + Q+S+    + +++    ND  L+     E +R+ E       +I   DGL+ 
Sbjct: 860 ----NFVNQISITDDFKNQVVTEYTNDTKLLNLLNNEDKRVEE-------NIQLKDGLLI 919

Query: 122 EGR--LCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRNMKREVADFVSRC 179
             +  + +P D+ +   ++ + H     +HPG   +   +   + W+ +++++ ++V  C
Sbjct: 920 NSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNC 961

[Close]

BLAST of Cmc10g0279621 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 2.8e-09
Identity = 42/184 (22.83%), Postives = 86/184 (46.74%), Query Frame = 0


Query: 2   RQRRWLELVKDYDCEILYHPGKANVVADALSKKVAHSAALITKQALLLRDFERAEIAVSV 61
           R  RW   ++D++ EI Y PG AN +ADALS+       ++ +   + +D E   I    
Sbjct: 800 RLARWQLFLQDFNFEINYRPGSANHIADALSR-------IVDETEPIPKDSEDNSI---- 859

Query: 62  GEITSQLAQLSVQPTLRQKIIVAQLNDPYLV-----EKRRLVETGQGEDFSISSDDGLMF 121
               + + Q+S+    + +++    ND  L+     E +R+ E       +I   DGL+ 
Sbjct: 860 ----NFVNQISITDDFKNQVVTEYTNDTKLLNLLNNEDKRVEE-------NIQLKDGLLI 919

Query: 122 EGR--LCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRNMKREVADFVSRC 179
             +  + +P D+ +   ++ + H     +HPG   +   +   + W+ +++++ ++V  C
Sbjct: 920 NSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNC 961

[Close]

BLAST of Cmc10g0279621 vs. ExPASy Swiss-Prot
Match: P0CT36 (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-3 PE=1 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 2.8e-09
Identity = 42/184 (22.83%), Postives = 86/184 (46.74%), Query Frame = 0


Query: 2   RQRRWLELVKDYDCEILYHPGKANVVADALSKKVAHSAALITKQALLLRDFERAEIAVSV 61
           R  RW   ++D++ EI Y PG AN +ADALS+       ++ +   + +D E   I    
Sbjct: 800 RLARWQLFLQDFNFEINYRPGSANHIADALSR-------IVDETEPIPKDSEDNSI---- 859

Query: 62  GEITSQLAQLSVQPTLRQKIIVAQLNDPYLV-----EKRRLVETGQGEDFSISSDDGLMF 121
               + + Q+S+    + +++    ND  L+     E +R+ E       +I   DGL+ 
Sbjct: 860 ----NFVNQISITDDFKNQVVTEYTNDTKLLNLLNNEDKRVEE-------NIQLKDGLLI 919

Query: 122 EGR--LCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRNMKREVADFVSRC 179
             +  + +P D+ +   ++ + H     +HPG   +   +   + W+ +++++ ++V  C
Sbjct: 920 NSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNC 961

[Close]

BLAST of Cmc10g0279621 vs. ExPASy TrEMBL
Match: A0A5A7TDX1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold6G00780 PE=4 SV=1)

HSP 1 Score: 357.8 bits (917), Expect = 2.6e-95
Identity = 178/184 (96.74%), Postives = 181/184 (98.37%), Query Frame = 0


Query: 1   MRQRRWLELVKDYDCEILYHPGKANVVADALSKKVAHSAALITKQALLLRDFERAEIAVS 60
           MR RRWLELVKDYDCEILYHPGKANVVADALS+KVAHSAALITKQA LLRDFERAEIAVS
Sbjct: 729 MRHRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQAPLLRDFERAEIAVS 788

Query: 61  VGEITSQLAQLSVQPTLRQKIIVAQLNDPYLVEKRRLVETGQGEDFSISSDDGLMFEGRL 120
           VGE+TSQLAQLSVQPTLRQ+IIVAQLNDPYLVEKRRLVETGQGEDFSIS DDGLMFEGRL
Sbjct: 789 VGEVTSQLAQLSVQPTLRQRIIVAQLNDPYLVEKRRLVETGQGEDFSISFDDGLMFEGRL 848

Query: 121 CVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRNMKREVADFVSRCLVCQQV 180
           CVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRNMKREVADFVSRCLVCQQV
Sbjct: 849 CVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRNMKREVADFVSRCLVCQQV 908

Query: 181 KAPR 185
           KAPR
Sbjct: 909 KAPR 912

[Close]

BLAST of Cmc10g0279621 vs. ExPASy TrEMBL
Match: A0A5D3DL91 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold205G001470 PE=4 SV=1)

HSP 1 Score: 357.8 bits (917), Expect = 2.6e-95
Identity = 178/184 (96.74%), Postives = 181/184 (98.37%), Query Frame = 0


Query: 1   MRQRRWLELVKDYDCEILYHPGKANVVADALSKKVAHSAALITKQALLLRDFERAEIAVS 60
           MR RRWLELVKDYDCEILYHPGKANVVADALS+KVAHSAALITKQA LLRDFERAEIAVS
Sbjct: 729 MRHRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQAPLLRDFERAEIAVS 788

Query: 61  VGEITSQLAQLSVQPTLRQKIIVAQLNDPYLVEKRRLVETGQGEDFSISSDDGLMFEGRL 120
           VGE+TSQLAQLSVQPTLRQ+IIVAQLNDPYLVEKRRLVETGQGEDFSIS DDGLMFEGRL
Sbjct: 789 VGEVTSQLAQLSVQPTLRQRIIVAQLNDPYLVEKRRLVETGQGEDFSISFDDGLMFEGRL 848

Query: 121 CVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRNMKREVADFVSRCLVCQQV 180
           CVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRNMKREVADFVSRCLVCQQV
Sbjct: 849 CVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRNMKREVADFVSRCLVCQQV 908

Query: 181 KAPR 185
           KAPR
Sbjct: 909 KAPR 912

[Close]

BLAST of Cmc10g0279621 vs. ExPASy TrEMBL
Match: A0A5A7U8T4 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold13G001960 PE=4 SV=1)

HSP 1 Score: 354.8 bits (909), Expect = 2.2e-94
Identity = 175/184 (95.11%), Postives = 181/184 (98.37%), Query Frame = 0


Query: 1   MRQRRWLELVKDYDCEILYHPGKANVVADALSKKVAHSAALITKQALLLRDFERAEIAVS 60
           MRQRRWLELVKDYDCE+LYHPGKANVVADALS+KVAHSAALITKQA LLRDFERAEIAVS
Sbjct: 664 MRQRRWLELVKDYDCEMLYHPGKANVVADALSRKVAHSAALITKQAPLLRDFERAEIAVS 723

Query: 61  VGEITSQLAQLSVQPTLRQKIIVAQLNDPYLVEKRRLVETGQGEDFSISSDDGLMFEGRL 120
           VGE+TSQLAQLSVQPTLRQ+IIVAQLNDPYLVEKRRLVETGQGEDFSISSDDGL FEGRL
Sbjct: 724 VGEVTSQLAQLSVQPTLRQRIIVAQLNDPYLVEKRRLVETGQGEDFSISSDDGLTFEGRL 783

Query: 121 CVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRNMKREVADFVSRCLVCQQV 180
           CVP+DSA+KTELLTE HSSPFTMHPGSTKMYQDLRSVYWWRNMKREVADFVSRCLVCQQV
Sbjct: 784 CVPKDSAIKTELLTEIHSSPFTMHPGSTKMYQDLRSVYWWRNMKREVADFVSRCLVCQQV 843

Query: 181 KAPR 185
           KAPR
Sbjct: 844 KAPR 847

[Close]

BLAST of Cmc10g0279621 vs. ExPASy TrEMBL
Match: A0A5A7TG62 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold262G001030 PE=4 SV=1)

HSP 1 Score: 354.4 bits (908), Expect = 2.9e-94
Identity = 175/184 (95.11%), Postives = 179/184 (97.28%), Query Frame = 0


Query: 1    MRQRRWLELVKDYDCEILYHPGKANVVADALSKKVAHSAALITKQALLLRDFERAEIAVS 60
            MRQRRWLELVKDYDCEILYHPGKANVVADALS+KVAHSA LITKQ  LLRDFERAEIAVS
Sbjct: 976  MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAVLITKQTPLLRDFERAEIAVS 1035

Query: 61   VGEITSQLAQLSVQPTLRQKIIVAQLNDPYLVEKRRLVETGQGEDFSISSDDGLMFEGRL 120
            VGE+TSQLAQLSVQPTLRQKII AQLNDPYLVEKRR+VETGQGEDFSISSDDGLMFEGRL
Sbjct: 1036 VGEVTSQLAQLSVQPTLRQKIIAAQLNDPYLVEKRRMVETGQGEDFSISSDDGLMFEGRL 1095

Query: 121  CVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRNMKREVADFVSRCLVCQQV 180
            CVPEDSAV+TELLTEAHSSPFTMHPGSTKMYQDLRSVYWWR MKREVADFVSRCLVCQQV
Sbjct: 1096 CVPEDSAVRTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKREVADFVSRCLVCQQV 1155

Query: 181  KAPR 185
            KAPR
Sbjct: 1156 KAPR 1159

[Close]

BLAST of Cmc10g0279621 vs. ExPASy TrEMBL
Match: A0A5A7TBV4 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold125G001380 PE=4 SV=1)

HSP 1 Score: 354.4 bits (908), Expect = 2.9e-94
Identity = 175/184 (95.11%), Postives = 179/184 (97.28%), Query Frame = 0


Query: 1   MRQRRWLELVKDYDCEILYHPGKANVVADALSKKVAHSAALITKQALLLRDFERAEIAVS 60
           MRQRRWLELVKDYDCEILYHPGKANVVADALS+KVAHSAALITKQ  LLRDFERAEIAVS
Sbjct: 257 MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLLRDFERAEIAVS 316

Query: 61  VGEITSQLAQLSVQPTLRQKIIVAQLNDPYLVEKRRLVETGQGEDFSISSDDGLMFEGRL 120
           VGE+T+QLAQLSVQPTLRQKII AQLNDPYL EKRR+VETGQGEDFSISSDDGLMFEGRL
Sbjct: 317 VGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLAEKRRMVETGQGEDFSISSDDGLMFEGRL 376

Query: 121 CVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRNMKREVADFVSRCLVCQQV 180
           CVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWR MKREVADFVSRCLVCQQV
Sbjct: 377 CVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKREVADFVSRCLVCQQV 436

Query: 181 KAPR 185
           KAPR
Sbjct: 437 KAPR 440

The following BLAST results are available for this feature:

BLAST of Cmc10g0279621 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0041490.1	5.5e-95	96.74	hypothetical protein E6C27_scaffold6G00780 [Cucumis melo var. makuwa]	[more]
TYK24364.1	5.5e-95	96.74	putative polyprotein [Cucumis melo var. makuwa]	[more]
KAA0050011.1	4.6e-94	95.11	pol protein [Cucumis melo var. makuwa]	[more]
KAA0040547.1	6.0e-94	95.11	pol protein [Cucumis melo var. makuwa]	[more]
KAA0040942.1	6.0e-94	95.11	pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc10g0279621 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9UR07	2.8e-09	22.83	Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT41	2.8e-09	22.83	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	2.8e-09	22.83	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT35	2.8e-09	22.83	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT36	2.8e-09	22.83	Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Cmc10g0279621 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TDX1	2.6e-95	96.74	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold6G...	[more]
A0A5D3DL91	2.6e-95	96.74	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold20...	[more]
A0A5A7U8T4	2.2e-94	95.11	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold13G001960 PE...	[more]
A0A5A7TG62	2.9e-94	95.11	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold26...	[more]
A0A5A7TBV4	2.9e-94	95.11	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold125G001380 P...	[more]

BLAST of Cmc10g0279621 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.340.70		coord: 86..181 e-value: 7.2E-19 score: 69.8
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 66..159
None	No IPR available	PANTHER	PTHR24559:SF377	SUBFAMILY NOT NAMED	coord: 66..159
IPR041588	Integrase zinc-binding domain	PFAM	PF17921	Integrase_H2C2	coord: 126..182 e-value: 7.3E-18 score: 64.4

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc10g0279621.1	Cmc10g0279621.1	mRNA