Cmc10g0279401 (gene) Melon (Charmono) v1.1

Overview
NameCmc10g0279401
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
LocationCMiso1.1chr10: 16539199 .. 16540014 (+)
RNA-Seq ExpressionCmc10g0279401
SyntenyCmc10g0279401
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACTTTGGTAGCTCATTATGATTTAGAGCTTCATCAAATGGATGTGAAAACCGCCTTTCTAAATGAAAATTTAGATGAAGAAGTGTTCATGAATCAACCAGAAGGTTTTATGGTTGAAGGAAAGGAACATATGGTGTGTAAATTAAAGAGATCAATATATGGACTTAAACAAGCTTCCAGACAGTGGTATCTTAAGTTTAATGATACCATCACATCTTTTGGTTTTAAAGAAAACATCATTGATCGATGTATATACCTAAAGATCAGTGGGAGTAAGTTTATAATTCTTGTTCTATATGTTGATGACATCTTGCTTGCTACAAATGACTTTGGTTTATTATGTCAAACCAAAGAATTTCTTTCTAAAAACTTTGAAATGAAAGATATGGGTGAGGCATCCTATGTGATTGGAATTGAAATATTCCGTGATCGAACATATGGGTTGTTAGGATTGTCTCAAAAGGCCTATATTAATAAAGTTTTAGAGAAATTTAAGATGGACAAATGCTCTTCAAGTGTAGTTCCAATTCAGAAGGGAGATAAATTTAGTCTCATGCAATGTCCAAAAAATGAATTTGAACGAAATCAGATGGAAACTATTCCTTATGCATCTATTGTTGGAAGCTTATTGTATGCACAAACTTGCACTAGACCAGATATCAGTTTTGTTGTGGGTATGCTAGGCATGTATCAAAGTAATCCAGGAATGGATCATTGGAAAGCTGCAAAGAAAGTCTTAAGGTATCTGCAAGGAACAAAAGATTATATGCTTACTTACAAGAGATCTGATCATCTTGAGGTGATTGGATATTAA

mRNA sequence

ATGACTTTGGTAGCTCATTATGATTTAGAGCTTCATCAAATGGATGTGAAAACCGCCTTTCTAAATGAAAATTTAGATGAAGAAGTGTTCATGAATCAACCAGAAGGTTTTATGGTTGAAGGAAAGGAACATATGGTGTGTAAATTAAAGAGATCAATATATGGACTTAAACAAGCTTCCAGACAGTGGTATCTTAAGTTTAATGATACCATCACATCTTTTGGTTTTAAAGAAAACATCATTGATCGATGTATATACCTAAAGATCAGTGGGAGTAAGTTTATAATTCTTGTTCTATATGTTGATGACATCTTGCTTGCTACAAATGACTTTGGTTTATTATGTCAAACCAAAGAATTTCTTTCTAAAAACTTTGAAATGAAAGATATGGGTGAGGCATCCTATGTGATTGGAATTGAAATATTCCGTGATCGAACATATGGGTTGTTAGGATTGTCTCAAAAGGCCTATATTAATAAAGTTTTAGAGAAATTTAAGATGGACAAATGCTCTTCAAGTGTAGTTCCAATTCAGAAGGGAGATAAATTTAGTCTCATGCAATGTCCAAAAAATGAATTTGAACGAAATCAGATGGAAACTATTCCTTATGCATCTATTGTTGGAAGCTTATTGTATGCACAAACTTGCACTAGACCAGATATCAGTTTTGTTGTGGGTATGCTAGGCATGTATCAAAGTAATCCAGGAATGGATCATTGGAAAGCTGCAAAGAAAGTCTTAAGGTATCTGCAAGGAACAAAAGATTATATGCTTACTTACAAGAGATCTGATCATCTTGAGGTGATTGGATATTAA

Coding sequence (CDS)

ATGACTTTGGTAGCTCATTATGATTTAGAGCTTCATCAAATGGATGTGAAAACCGCCTTTCTAAATGAAAATTTAGATGAAGAAGTGTTCATGAATCAACCAGAAGGTTTTATGGTTGAAGGAAAGGAACATATGGTGTGTAAATTAAAGAGATCAATATATGGACTTAAACAAGCTTCCAGACAGTGGTATCTTAAGTTTAATGATACCATCACATCTTTTGGTTTTAAAGAAAACATCATTGATCGATGTATATACCTAAAGATCAGTGGGAGTAAGTTTATAATTCTTGTTCTATATGTTGATGACATCTTGCTTGCTACAAATGACTTTGGTTTATTATGTCAAACCAAAGAATTTCTTTCTAAAAACTTTGAAATGAAAGATATGGGTGAGGCATCCTATGTGATTGGAATTGAAATATTCCGTGATCGAACATATGGGTTGTTAGGATTGTCTCAAAAGGCCTATATTAATAAAGTTTTAGAGAAATTTAAGATGGACAAATGCTCTTCAAGTGTAGTTCCAATTCAGAAGGGAGATAAATTTAGTCTCATGCAATGTCCAAAAAATGAATTTGAACGAAATCAGATGGAAACTATTCCTTATGCATCTATTGTTGGAAGCTTATTGTATGCACAAACTTGCACTAGACCAGATATCAGTTTTGTTGTGGGTATGCTAGGCATGTATCAAAGTAATCCAGGAATGGATCATTGGAAAGCTGCAAAGAAAGTCTTAAGGTATCTGCAAGGAACAAAAGATTATATGCTTACTTACAAGAGATCTGATCATCTTGAGGTGATTGGATATTAA

Protein sequence

MTLVAHYDLELHQMDVKTAFLNENLDEEVFMNQPEGFMVEGKEHMVCKLKRSIYGLKQASRQWYLKFNDTITSFGFKENIIDRCIYLKISGSKFIILVLYVDDILLATNDFGLLCQTKEFLSKNFEMKDMGEASYVIGIEIFRDRTYGLLGLSQKAYINKVLEKFKMDKCSSSVVPIQKGDKFSLMQCPKNEFERNQMETIPYASIVGSLLYAQTCTRPDISFVVGMLGMYQSNPGMDHWKAAKKVLRYLQGTKDYMLTYKRSDHLEVIGY
Homology
BLAST of Cmc10g0279401 vs. NCBI nr
Match: KAA0033349.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 518.5 bits (1334), Expect = 3.6e-143
Identity = 256/271 (94.46%), Postives = 261/271 (96.31%), Query Frame = 0

Query: 1   MTLVAHYDLELHQMDVKTAFLNENLDEEVFMNQPEGFMVEGKEHMVCKLKRSIYGLKQAS 60
           M LVAHYDLELHQMDVKTAFLN NLDEEVFM+QPEGFMVEGKEHMVCKLKRSIYGLKQAS
Sbjct: 41  MALVAHYDLELHQMDVKTAFLNGNLDEEVFMDQPEGFMVEGKEHMVCKLKRSIYGLKQAS 100

Query: 61  RQWYLKFNDTITSFGFKENIIDRCIYLKISGSKFIILVLYVDDILLATNDFGLLCQTKEF 120
           RQ YLKFNDTITSFGFKENI+DRCIYLKISGSKFI+LVLYVDDILLAT DFGLLCQTKEF
Sbjct: 101 RQCYLKFNDTITSFGFKENIVDRCIYLKISGSKFIVLVLYVDDILLATIDFGLLCQTKEF 160

Query: 121 LSKNFEMKDMGEASYVIGIEIFRDRTYGLLGLSQKAYINKVLEKFKMDKCSSSVVPIQKG 180
           LSKNFEMKDMGEASYVI IEIFRDR +GLLGLSQKAYINKVLEKFKMDKCSSSVVPIQKG
Sbjct: 161 LSKNFEMKDMGEASYVIKIEIFRDRAHGLLGLSQKAYINKVLEKFKMDKCSSSVVPIQKG 220

Query: 181 DKFSLMQCPKNEFERNQMETIPYASIVGSLLYAQTCTRPDISFVVGMLGMYQSNPGMDHW 240
           DKF+LMQCPKNE ERNQMETIPYASIVGSLLYAQTCTRPDISF VGMLG YQSNPGMDHW
Sbjct: 221 DKFNLMQCPKNELERNQMETIPYASIVGSLLYAQTCTRPDISFAVGMLGRYQSNPGMDHW 280

Query: 241 KAAKKVLRYLQGTKDYMLTYKRSDHLEVIGY 272
           KAAKKV RYLQGTKDYMLTYKRSDHLEVIGY
Sbjct: 281 KAAKKVSRYLQGTKDYMLTYKRSDHLEVIGY 311

BLAST of Cmc10g0279401 vs. NCBI nr
Match: KAA0052755.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 517.7 bits (1332), Expect = 6.1e-143
Identity = 256/271 (94.46%), Postives = 260/271 (95.94%), Query Frame = 0

Query: 1   MTLVAHYDLELHQMDVKTAFLNENLDEEVFMNQPEGFMVEGKEHMVCKLKRSIYGLKQAS 60
           M LVAHYDLELHQMDVKTAFLN NLDEEVFM+QPEGFMVEGKEHMVCKLKRSIYGLKQAS
Sbjct: 619 MALVAHYDLELHQMDVKTAFLNGNLDEEVFMDQPEGFMVEGKEHMVCKLKRSIYGLKQAS 678

Query: 61  RQWYLKFNDTITSFGFKENIIDRCIYLKISGSKFIILVLYVDDILLATNDFGLLCQTKEF 120
           RQWYLKFNDTITSFGFKENI+DRCIYLKISGSKFIILVLYVDDILLATNDFGLLCQTKEF
Sbjct: 679 RQWYLKFNDTITSFGFKENIVDRCIYLKISGSKFIILVLYVDDILLATNDFGLLCQTKEF 738

Query: 121 LSKNFEMKDMGEASYVIGIEIFRDRTYGLLGLSQKAYINKVLEKFKMDKCSSSVVPIQKG 180
           LSKNFEMKDM EASYVIGIEIFRDRT+GLLGLSQ AYINKVLEKFKM+KCSSSVVPIQKG
Sbjct: 739 LSKNFEMKDMSEASYVIGIEIFRDRTHGLLGLSQNAYINKVLEKFKMNKCSSSVVPIQKG 798

Query: 181 DKFSLMQCPKNEFERNQMETIPYASIVGSLLYAQTCTRPDISFVVGMLGMYQSNPGMDHW 240
           DKFSLMQCPKNE ERNQMETI YASIVGSLLYAQTCTR DISF VGMLG YQSNPGMDHW
Sbjct: 799 DKFSLMQCPKNELERNQMETISYASIVGSLLYAQTCTRLDISFAVGMLGRYQSNPGMDHW 858

Query: 241 KAAKKVLRYLQGTKDYMLTYKRSDHLEVIGY 272
           KAAKKVLRYLQG KDYMLTYKRSDHLEVI Y
Sbjct: 859 KAAKKVLRYLQGAKDYMLTYKRSDHLEVIEY 889

BLAST of Cmc10g0279401 vs. NCBI nr
Match: TYK04201.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 517.7 bits (1332), Expect = 6.1e-143
Identity = 256/271 (94.46%), Postives = 260/271 (95.94%), Query Frame = 0

Query: 1   MTLVAHYDLELHQMDVKTAFLNENLDEEVFMNQPEGFMVEGKEHMVCKLKRSIYGLKQAS 60
           M LVAHYDLELHQMDVKTAFLN NLDEEVFM+QPEGFMVEGKEHMVCKLKRSIYGLKQAS
Sbjct: 619 MALVAHYDLELHQMDVKTAFLNGNLDEEVFMDQPEGFMVEGKEHMVCKLKRSIYGLKQAS 678

Query: 61  RQWYLKFNDTITSFGFKENIIDRCIYLKISGSKFIILVLYVDDILLATNDFGLLCQTKEF 120
           RQWYLKFNDTITSFGFKENI+DRCIYLKISGSKFIILVLYVDDILLATNDFGLLCQTKEF
Sbjct: 679 RQWYLKFNDTITSFGFKENIVDRCIYLKISGSKFIILVLYVDDILLATNDFGLLCQTKEF 738

Query: 121 LSKNFEMKDMGEASYVIGIEIFRDRTYGLLGLSQKAYINKVLEKFKMDKCSSSVVPIQKG 180
           LSKNFEMKDM EASYVIGIEIFRDRT+GLLGLSQ AYINKVLEKFKM+KCSSSVVPIQKG
Sbjct: 739 LSKNFEMKDMSEASYVIGIEIFRDRTHGLLGLSQNAYINKVLEKFKMNKCSSSVVPIQKG 798

Query: 181 DKFSLMQCPKNEFERNQMETIPYASIVGSLLYAQTCTRPDISFVVGMLGMYQSNPGMDHW 240
           DKFSLMQCPKNE ERNQMETI YASIVGSLLYAQTCTR DISF VGMLG YQSNPGMDHW
Sbjct: 799 DKFSLMQCPKNELERNQMETISYASIVGSLLYAQTCTRLDISFAVGMLGRYQSNPGMDHW 858

Query: 241 KAAKKVLRYLQGTKDYMLTYKRSDHLEVIGY 272
           KAAKKVLRYLQG KDYMLTYKRSDHLEVI Y
Sbjct: 859 KAAKKVLRYLQGAKDYMLTYKRSDHLEVIEY 889

BLAST of Cmc10g0279401 vs. NCBI nr
Match: TYK00088.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 513.5 bits (1321), Expect = 1.1e-141
Identity = 252/271 (92.99%), Postives = 261/271 (96.31%), Query Frame = 0

Query: 1   MTLVAHYDLELHQMDVKTAFLNENLDEEVFMNQPEGFMVEGKEHMVCKLKRSIYGLKQAS 60
           M LVAHYDLELHQMDVKTAF+N NLDE++FM+QPEGFMVEGKEHMVCKLKRSIYGLKQAS
Sbjct: 72  MALVAHYDLELHQMDVKTAFINGNLDEKLFMDQPEGFMVEGKEHMVCKLKRSIYGLKQAS 131

Query: 61  RQWYLKFNDTITSFGFKENIIDRCIYLKISGSKFIILVLYVDDILLATNDFGLLCQTKEF 120
           RQWYLKFNDTITSFGFKENI+DRCIYLKISGSKFIILVLYVDDILLATNDFGLLCQTKEF
Sbjct: 132 RQWYLKFNDTITSFGFKENIVDRCIYLKISGSKFIILVLYVDDILLATNDFGLLCQTKEF 191

Query: 121 LSKNFEMKDMGEASYVIGIEIFRDRTYGLLGLSQKAYINKVLEKFKMDKCSSSVVPIQKG 180
           LSKNFEMKDMGEASYVIGIEIFRDRT+GLL LSQKAYINKVL+KFKMDKCSSSVVPI KG
Sbjct: 192 LSKNFEMKDMGEASYVIGIEIFRDRTHGLLRLSQKAYINKVLDKFKMDKCSSSVVPIHKG 251

Query: 181 DKFSLMQCPKNEFERNQMETIPYASIVGSLLYAQTCTRPDISFVVGMLGMYQSNPGMDHW 240
           DKFSLMQCPKNE ERNQMETIPYASIVGSLLYAQT TRPDISF VGML  YQSNPGM+HW
Sbjct: 252 DKFSLMQCPKNELERNQMETIPYASIVGSLLYAQTYTRPDISFAVGMLDRYQSNPGMNHW 311

Query: 241 KAAKKVLRYLQGTKDYMLTYKRSDHLEVIGY 272
           KAA KVLRYLQGTKDYMLTYKRSDHL+VIGY
Sbjct: 312 KAAMKVLRYLQGTKDYMLTYKRSDHLKVIGY 342

BLAST of Cmc10g0279401 vs. NCBI nr
Match: RYE20331.1 (hypothetical protein EOP45_11235, partial [Sphingobacteriaceae bacterium])

HSP 1 Score: 495.7 bits (1275), Expect = 2.5e-136
Identity = 242/271 (89.30%), Postives = 255/271 (94.10%), Query Frame = 0

Query: 1   MTLVAHYDLELHQMDVKTAFLNENLDEEVFMNQPEGFMVEGKEHMVCKLKRSIYGLKQAS 60
           M +VAHYDLELHQMDVKTAFLN NLDEEVFM+QPEGF+V+GKEHMVCKLK+SIYGLKQAS
Sbjct: 61  MAMVAHYDLELHQMDVKTAFLNGNLDEEVFMDQPEGFVVDGKEHMVCKLKKSIYGLKQAS 120

Query: 61  RQWYLKFNDTITSFGFKENIIDRCIYLKISGSKFIILVLYVDDILLATNDFGLLCQTKEF 120
           RQWYLKFNDT+TSFGFKENI+DRCIYLKISGSKFIILVLYVDDILLATND GLL QTKEF
Sbjct: 121 RQWYLKFNDTVTSFGFKENIVDRCIYLKISGSKFIILVLYVDDILLATNDLGLLRQTKEF 180

Query: 121 LSKNFEMKDMGEASYVIGIEIFRDRTYGLLGLSQKAYINKVLEKFKMDKCSSSVVPIQKG 180
           LSKNFEMKDMGEASYVIGIEI RDR+ G LGLSQKAYINKVLE+FKMDKCS+ +VPIQKG
Sbjct: 181 LSKNFEMKDMGEASYVIGIEISRDRSQGWLGLSQKAYINKVLERFKMDKCSAGIVPIQKG 240

Query: 181 DKFSLMQCPKNEFERNQMETIPYASIVGSLLYAQTCTRPDISFVVGMLGMYQSNPGMDHW 240
           DKFSL QCPKNE ER QME IPYASIVGSL+YAQTCTRP ISF VGMLG YQSNPG+DHW
Sbjct: 241 DKFSLNQCPKNELERKQMEQIPYASIVGSLMYAQTCTRPGISFAVGMLGRYQSNPGIDHW 300

Query: 241 KAAKKVLRYLQGTKDYMLTYKRSDHLEVIGY 272
           KAAKKVLRYLQGTKD MLTYKRSDHLEVIGY
Sbjct: 301 KAAKKVLRYLQGTKDRMLTYKRSDHLEVIGY 331

BLAST of Cmc10g0279401 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 1.0e-68
Identity = 129/265 (48.68%), Postives = 178/265 (67.17%), Query Frame = 0

Query: 1    MTLVAHYDLELHQMDVKTAFLNENLDEEVFMNQPEGFMVEGKEHMVCKLKRSIYGLKQAS 60
            ++L A  DLE+ Q+DVKTAFL+ +L+EE++M QPEGF V GK+HMVCKL +S+YGLKQA 
Sbjct: 908  LSLAASLDLEVEQLDVKTAFLHGDLEEEIYMEQPEGFEVAGKKHMVCKLNKSLYGLKQAP 967

Query: 61   RQWYLKFNDTITSFGFKENIIDRCIYLK-ISGSKFIILVLYVDDILLATNDFGLLCQTKE 120
            RQWY+KF+  + S  + +   D C+Y K  S + FIIL+LYVDD+L+   D GL+ + K 
Sbjct: 968  RQWYMKFDSFMKSQTYLKTYSDPCVYFKRFSENNFIILLLYVDDMLIVGKDKGLIAKLKG 1027

Query: 121  FLSKNFEMKDMGEASYVIGIEIFRDRTYGLLGLSQKAYINKVLEKFKMDKCSSSVVPIQK 180
             LSK+F+MKD+G A  ++G++I R+RT   L LSQ+ YI +VLE+F M        P+  
Sbjct: 1028 DLSKSFDMKDLGPAQQILGMKIVRERTSRKLWLSQEKYIERVLERFNMKNAKPVSTPLAG 1087

Query: 181  GDKFSLMQCPKNEFERNQMETIPYASIVGSLLYAQTCTRPDISFVVGMLGMYQSNPGMDH 240
              K S   CP    E+  M  +PY+S VGSL+YA  CTRPDI+  VG++  +  NPG +H
Sbjct: 1088 HLKLSKKMCPTTVEEKGNMAKVPYSSAVGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEH 1147

Query: 241  WKAAKKVLRYLQGTKDYMLTYKRSD 265
            W+A K +LRYL+GT    L +  SD
Sbjct: 1148 WEAVKWILRYLRGTTGDCLCFGGSD 1172

BLAST of Cmc10g0279401 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 193.0 bits (489), Expect = 4.5e-48
Identity = 106/277 (38.27%), Postives = 161/277 (58.12%), Query Frame = 0

Query: 1    MTLVAHYDLELHQMDVKTAFLNENLDEEVFMNQPEGFMVEGKEHMVCKLKRSIYGLKQAS 60
            ++LV  Y+L++HQMDVKTAFLN  L EE++M  P+G  +      VCKL ++IYGLKQA+
Sbjct: 988  LSLVIQYNLKVHQMDVKTAFLNGTLKEEIYMRLPQG--ISCNSDNVCKLNKAIYGLKQAA 1047

Query: 61   RQWYLKFNDTITSFGFKENIIDRCIYLKISG--SKFIILVLYVDDILLATNDFGLLCQTK 120
            R W+  F   +    F  + +DRCIY+   G  ++ I ++LYVDD+++AT D   +   K
Sbjct: 1048 RCWFEVFEQALKECEFVNSSVDRCIYILDKGNINENIYVLLYVDDVVIATGDMTRMNNFK 1107

Query: 121  EFLSKNFEMKDMGEASYVIG--IEIFRDRTYGLLGLSQKAYINKVLEKFKMDKCSSSVVP 180
             +L + F M D+ E  + IG  IE+  D+ Y    LSQ AY+ K+L KF M+ C++   P
Sbjct: 1108 RYLMEKFRMTDLNEIKHFIGIRIEMQEDKIY----LSQSAYVKKILSKFNMENCNAVSTP 1167

Query: 181  IQKGDKFSLMQCPKNEFERNQMETIPYASIVGSLLYAQTCTRPDISFVVGMLGMYQSNPG 240
            +     + L+   ++          P  S++G L+Y   CTRPD++  V +L  Y S   
Sbjct: 1168 LPSKINYELLNSDED-------CNTPCRSLIGCLMYIMLCTRPDLTTAVNILSRYSSKNN 1227

Query: 241  MDHWKAAKKVLRYLQGTKDYMLTYKRSDHLE--VIGY 272
             + W+  K+VLRYL+GT D  L +K++   E  +IGY
Sbjct: 1228 SELWQNLKRVLRYLKGTIDMKLIFKKNLAFENKIIGY 1251

BLAST of Cmc10g0279401 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 2.2e-39
Identity = 96/261 (36.78%), Postives = 140/261 (53.64%), Query Frame = 0

Query: 11   LHQMDVKTAFLNENLDEEVFMNQPEGFMVEGKEHMVCKLKRSIYGLKQASRQWYLKFNDT 70
            + Q+DV  AFL   L +EV+M+QP GF+ + +   VC+L+++IYGLKQA R WY++    
Sbjct: 1044 IRQLDVNNAFLQGTLTDEVYMSQPPGFVDKDRPDYVCRLRKAIYGLKQAPRAWYVELRTY 1103

Query: 71   ITSFGFKENIIDRCIYLKISGSKFIILVLYVDDILLATNDFGLLCQTKEFLSKNFEMKDM 130
            + + GF  +I D  +++   G   I +++YVDDIL+  ND  LL  T + LS+ F +K+ 
Sbjct: 1104 LLTVGFVNSISDTSLFVLQRGRSIIYMLVYVDDILITGNDTVLLKHTLDALSQRFSVKEH 1163

Query: 131  GEASYVIGIEIFRDRTYGLLGLSQKAYINKVLEKFKMDKCSSSVVPIQKGDKFSLMQCPK 190
             +  Y +GIE    R    L LSQ+ Y   +L +  M        P+    K +L    K
Sbjct: 1164 EDLHYFLGIE--AKRVPQGLHLSQRRYTLDLLARTNMLTAKPVATPMATSPKLTLHSGTK 1223

Query: 191  NEFERNQMETIPYASIVGSLLYAQTCTRPDISFVVGMLGMYQSNPGMDHWKAAKKVLRYL 250
                    +   Y  IVGSL Y    TRPD+S+ V  L  Y   P  DHW A K+VLRYL
Sbjct: 1224 ------LPDPTEYRGIVGSLQYL-AFTRPDLSYAVNRLSQYMHMPTDDHWNALKRVLRYL 1283

Query: 251  QGTKDYMLTYKRSDHLEVIGY 272
             GT D+ +  K+ + L +  Y
Sbjct: 1284 AGTPDHGIFLKKGNTLSLHAY 1295

BLAST of Cmc10g0279401 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 2.9e-39
Identity = 94/261 (36.02%), Postives = 144/261 (55.17%), Query Frame = 0

Query: 11   LHQMDVKTAFLNENLDEEVFMNQPEGFMVEGKEHMVCKLKRSIYGLKQASRQWYLKFNDT 70
            + Q+DV  AFL   L ++V+M+QP GF+ + + + VCKL++++YGLKQA R WY++  + 
Sbjct: 1061 IRQLDVNNAFLQGTLTDDVYMSQPPGFIDKDRPNYVCKLRKALYGLKQAPRAWYVELRNY 1120

Query: 71   ITSFGFKENIIDRCIYLKISGSKFIILVLYVDDILLATNDFGLLCQTKEFLSKNFEMKDM 130
            + + GF  ++ D  +++   G   + +++YVDDIL+  ND  LL  T + LS+ F +KD 
Sbjct: 1121 LLTIGFVNSVSDTSLFVLQRGKSIVYMLVYVDDILITGNDPTLLHNTLDNLSQRFSVKDH 1180

Query: 131  GEASYVIGIEIFRDRTYGLLGLSQKAYINKVLEKFKMDKCSSSVVPIQKGDKFSLMQCPK 190
             E  Y +GIE  R  T   L LSQ+ YI  +L +  M        P+    K SL    K
Sbjct: 1181 EELHYFLGIEAKRVPTG--LHLSQRRYILDLLARTNMITAKPVTTPMAPSPKLSLYSGTK 1240

Query: 191  NEFERNQMETIPYASIVGSLLYAQTCTRPDISFVVGMLGMYQSNPGMDHWKAAKKVLRYL 250
                    +   Y  IVGSL Y    TRPDIS+ V  L  +   P  +H +A K++LRYL
Sbjct: 1241 ------LTDPTEYRGIVGSLQYL-AFTRPDISYAVNRLSQFMHMPTEEHLQALKRILRYL 1300

Query: 251  QGTKDYMLTYKRSDHLEVIGY 272
             GT ++ +  K+ + L +  Y
Sbjct: 1301 AGTPNHGIFLKKGNTLSLHAY 1312

BLAST of Cmc10g0279401 vs. ExPASy Swiss-Prot
Match: P25600 (Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY5A PE=5 SV=2)

HSP 1 Score: 134.8 bits (338), Expect = 1.5e-30
Identity = 81/258 (31.40%), Postives = 131/258 (50.78%), Query Frame = 0

Query: 14  MDVKTAFLNENLDEEVFMNQPEGFMVEGKEHMVCKLKRSIYGLKQASRQWYLKFNDTITS 73
           MDV TAFLN  +DE +++ QP GF+ E     V +L   +YGLKQA   W    N+T+  
Sbjct: 1   MDVDTAFLNSTMDEPIYVKQPPGFVNERNPDYVWELYGGMYGLKQAPLLWNEHINNTLKK 60

Query: 74  FGFKENIIDRCIYLKISGSKFIILVLYVDDILLATNDFGLLCQTKEFLSKNFEMKDMGEA 133
            GF  +  +  +Y + +    I + +YVDD+L+A     +  + K+ L+K + MKD+G+ 
Sbjct: 61  IGFCRHEGEHGLYFRSTSDGPIYIAVYVDDLLVAAPSPKIYDRVKQELTKLYSMKDLGKV 120

Query: 134 SYVIGIEIFRDRTYGLLGLSQKAYINKVLEKFKMDKCSSSVVPIQKGDKFSLMQCPKNEF 193
              +G+ I +  + G + LS + YI K   + +++    +  P+           P    
Sbjct: 121 DKFLGLNIHQS-SNGDITLSLQDYIAKAASESEINTFKLTQTPLCNSKPLFETTSP---- 180

Query: 194 ERNQMETIPYASIVGSLLYAQTCTRPDISFVVGMLGMYQSNPGMDHWKAAKKVLRYLQGT 253
             +  +  PY SIVG LL+     RPDIS+ V +L  +   P   H ++A++VLRYL  T
Sbjct: 181 --HLKDITPYQSIVGQLLFCANTGRPDISYPVSLLSRFLREPRAIHLESARRVLRYLYTT 240

Query: 254 KDYMLTYKRSDHLEVIGY 272
           +   L Y+    L +  Y
Sbjct: 241 RSMCLKYRSGSQLALTVY 251

BLAST of Cmc10g0279401 vs. ExPASy TrEMBL
Match: A0A5A7SVZ5 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold845G001720 PE=4 SV=1)

HSP 1 Score: 518.5 bits (1334), Expect = 1.7e-143
Identity = 256/271 (94.46%), Postives = 261/271 (96.31%), Query Frame = 0

Query: 1   MTLVAHYDLELHQMDVKTAFLNENLDEEVFMNQPEGFMVEGKEHMVCKLKRSIYGLKQAS 60
           M LVAHYDLELHQMDVKTAFLN NLDEEVFM+QPEGFMVEGKEHMVCKLKRSIYGLKQAS
Sbjct: 41  MALVAHYDLELHQMDVKTAFLNGNLDEEVFMDQPEGFMVEGKEHMVCKLKRSIYGLKQAS 100

Query: 61  RQWYLKFNDTITSFGFKENIIDRCIYLKISGSKFIILVLYVDDILLATNDFGLLCQTKEF 120
           RQ YLKFNDTITSFGFKENI+DRCIYLKISGSKFI+LVLYVDDILLAT DFGLLCQTKEF
Sbjct: 101 RQCYLKFNDTITSFGFKENIVDRCIYLKISGSKFIVLVLYVDDILLATIDFGLLCQTKEF 160

Query: 121 LSKNFEMKDMGEASYVIGIEIFRDRTYGLLGLSQKAYINKVLEKFKMDKCSSSVVPIQKG 180
           LSKNFEMKDMGEASYVI IEIFRDR +GLLGLSQKAYINKVLEKFKMDKCSSSVVPIQKG
Sbjct: 161 LSKNFEMKDMGEASYVIKIEIFRDRAHGLLGLSQKAYINKVLEKFKMDKCSSSVVPIQKG 220

Query: 181 DKFSLMQCPKNEFERNQMETIPYASIVGSLLYAQTCTRPDISFVVGMLGMYQSNPGMDHW 240
           DKF+LMQCPKNE ERNQMETIPYASIVGSLLYAQTCTRPDISF VGMLG YQSNPGMDHW
Sbjct: 221 DKFNLMQCPKNELERNQMETIPYASIVGSLLYAQTCTRPDISFAVGMLGRYQSNPGMDHW 280

Query: 241 KAAKKVLRYLQGTKDYMLTYKRSDHLEVIGY 272
           KAAKKV RYLQGTKDYMLTYKRSDHLEVIGY
Sbjct: 281 KAAKKVSRYLQGTKDYMLTYKRSDHLEVIGY 311

BLAST of Cmc10g0279401 vs. ExPASy TrEMBL
Match: A0A5A7UG95 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43055G00040 PE=4 SV=1)

HSP 1 Score: 517.7 bits (1332), Expect = 2.9e-143
Identity = 256/271 (94.46%), Postives = 260/271 (95.94%), Query Frame = 0

Query: 1   MTLVAHYDLELHQMDVKTAFLNENLDEEVFMNQPEGFMVEGKEHMVCKLKRSIYGLKQAS 60
           M LVAHYDLELHQMDVKTAFLN NLDEEVFM+QPEGFMVEGKEHMVCKLKRSIYGLKQAS
Sbjct: 619 MALVAHYDLELHQMDVKTAFLNGNLDEEVFMDQPEGFMVEGKEHMVCKLKRSIYGLKQAS 678

Query: 61  RQWYLKFNDTITSFGFKENIIDRCIYLKISGSKFIILVLYVDDILLATNDFGLLCQTKEF 120
           RQWYLKFNDTITSFGFKENI+DRCIYLKISGSKFIILVLYVDDILLATNDFGLLCQTKEF
Sbjct: 679 RQWYLKFNDTITSFGFKENIVDRCIYLKISGSKFIILVLYVDDILLATNDFGLLCQTKEF 738

Query: 121 LSKNFEMKDMGEASYVIGIEIFRDRTYGLLGLSQKAYINKVLEKFKMDKCSSSVVPIQKG 180
           LSKNFEMKDM EASYVIGIEIFRDRT+GLLGLSQ AYINKVLEKFKM+KCSSSVVPIQKG
Sbjct: 739 LSKNFEMKDMSEASYVIGIEIFRDRTHGLLGLSQNAYINKVLEKFKMNKCSSSVVPIQKG 798

Query: 181 DKFSLMQCPKNEFERNQMETIPYASIVGSLLYAQTCTRPDISFVVGMLGMYQSNPGMDHW 240
           DKFSLMQCPKNE ERNQMETI YASIVGSLLYAQTCTR DISF VGMLG YQSNPGMDHW
Sbjct: 799 DKFSLMQCPKNELERNQMETISYASIVGSLLYAQTCTRLDISFAVGMLGRYQSNPGMDHW 858

Query: 241 KAAKKVLRYLQGTKDYMLTYKRSDHLEVIGY 272
           KAAKKVLRYLQG KDYMLTYKRSDHLEVI Y
Sbjct: 859 KAAKKVLRYLQGAKDYMLTYKRSDHLEVIEY 889

BLAST of Cmc10g0279401 vs. ExPASy TrEMBL
Match: A0A5D3BWW5 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1856G00300 PE=4 SV=1)

HSP 1 Score: 517.7 bits (1332), Expect = 2.9e-143
Identity = 256/271 (94.46%), Postives = 260/271 (95.94%), Query Frame = 0

Query: 1   MTLVAHYDLELHQMDVKTAFLNENLDEEVFMNQPEGFMVEGKEHMVCKLKRSIYGLKQAS 60
           M LVAHYDLELHQMDVKTAFLN NLDEEVFM+QPEGFMVEGKEHMVCKLKRSIYGLKQAS
Sbjct: 619 MALVAHYDLELHQMDVKTAFLNGNLDEEVFMDQPEGFMVEGKEHMVCKLKRSIYGLKQAS 678

Query: 61  RQWYLKFNDTITSFGFKENIIDRCIYLKISGSKFIILVLYVDDILLATNDFGLLCQTKEF 120
           RQWYLKFNDTITSFGFKENI+DRCIYLKISGSKFIILVLYVDDILLATNDFGLLCQTKEF
Sbjct: 679 RQWYLKFNDTITSFGFKENIVDRCIYLKISGSKFIILVLYVDDILLATNDFGLLCQTKEF 738

Query: 121 LSKNFEMKDMGEASYVIGIEIFRDRTYGLLGLSQKAYINKVLEKFKMDKCSSSVVPIQKG 180
           LSKNFEMKDM EASYVIGIEIFRDRT+GLLGLSQ AYINKVLEKFKM+KCSSSVVPIQKG
Sbjct: 739 LSKNFEMKDMSEASYVIGIEIFRDRTHGLLGLSQNAYINKVLEKFKMNKCSSSVVPIQKG 798

Query: 181 DKFSLMQCPKNEFERNQMETIPYASIVGSLLYAQTCTRPDISFVVGMLGMYQSNPGMDHW 240
           DKFSLMQCPKNE ERNQMETI YASIVGSLLYAQTCTR DISF VGMLG YQSNPGMDHW
Sbjct: 799 DKFSLMQCPKNELERNQMETISYASIVGSLLYAQTCTRLDISFAVGMLGRYQSNPGMDHW 858

Query: 241 KAAKKVLRYLQGTKDYMLTYKRSDHLEVIGY 272
           KAAKKVLRYLQG KDYMLTYKRSDHLEVI Y
Sbjct: 859 KAAKKVLRYLQGAKDYMLTYKRSDHLEVIEY 889

BLAST of Cmc10g0279401 vs. ExPASy TrEMBL
Match: A0A5D3BLU0 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold596G00400 PE=4 SV=1)

HSP 1 Score: 513.5 bits (1321), Expect = 5.5e-142
Identity = 252/271 (92.99%), Postives = 261/271 (96.31%), Query Frame = 0

Query: 1   MTLVAHYDLELHQMDVKTAFLNENLDEEVFMNQPEGFMVEGKEHMVCKLKRSIYGLKQAS 60
           M LVAHYDLELHQMDVKTAF+N NLDE++FM+QPEGFMVEGKEHMVCKLKRSIYGLKQAS
Sbjct: 72  MALVAHYDLELHQMDVKTAFINGNLDEKLFMDQPEGFMVEGKEHMVCKLKRSIYGLKQAS 131

Query: 61  RQWYLKFNDTITSFGFKENIIDRCIYLKISGSKFIILVLYVDDILLATNDFGLLCQTKEF 120
           RQWYLKFNDTITSFGFKENI+DRCIYLKISGSKFIILVLYVDDILLATNDFGLLCQTKEF
Sbjct: 132 RQWYLKFNDTITSFGFKENIVDRCIYLKISGSKFIILVLYVDDILLATNDFGLLCQTKEF 191

Query: 121 LSKNFEMKDMGEASYVIGIEIFRDRTYGLLGLSQKAYINKVLEKFKMDKCSSSVVPIQKG 180
           LSKNFEMKDMGEASYVIGIEIFRDRT+GLL LSQKAYINKVL+KFKMDKCSSSVVPI KG
Sbjct: 192 LSKNFEMKDMGEASYVIGIEIFRDRTHGLLRLSQKAYINKVLDKFKMDKCSSSVVPIHKG 251

Query: 181 DKFSLMQCPKNEFERNQMETIPYASIVGSLLYAQTCTRPDISFVVGMLGMYQSNPGMDHW 240
           DKFSLMQCPKNE ERNQMETIPYASIVGSLLYAQT TRPDISF VGML  YQSNPGM+HW
Sbjct: 252 DKFSLMQCPKNELERNQMETIPYASIVGSLLYAQTYTRPDISFAVGMLDRYQSNPGMNHW 311

Query: 241 KAAKKVLRYLQGTKDYMLTYKRSDHLEVIGY 272
           KAA KVLRYLQGTKDYMLTYKRSDHL+VIGY
Sbjct: 312 KAAMKVLRYLQGTKDYMLTYKRSDHLKVIGY 342

BLAST of Cmc10g0279401 vs. ExPASy TrEMBL
Match: A0A4V1T029 (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) OS=Sphingobacteriaceae bacterium OX=2021370 GN=EOP45_11235 PE=4 SV=1)

HSP 1 Score: 495.7 bits (1275), Expect = 1.2e-136
Identity = 242/271 (89.30%), Postives = 255/271 (94.10%), Query Frame = 0

Query: 1   MTLVAHYDLELHQMDVKTAFLNENLDEEVFMNQPEGFMVEGKEHMVCKLKRSIYGLKQAS 60
           M +VAHYDLELHQMDVKTAFLN NLDEEVFM+QPEGF+V+GKEHMVCKLK+SIYGLKQAS
Sbjct: 61  MAMVAHYDLELHQMDVKTAFLNGNLDEEVFMDQPEGFVVDGKEHMVCKLKKSIYGLKQAS 120

Query: 61  RQWYLKFNDTITSFGFKENIIDRCIYLKISGSKFIILVLYVDDILLATNDFGLLCQTKEF 120
           RQWYLKFNDT+TSFGFKENI+DRCIYLKISGSKFIILVLYVDDILLATND GLL QTKEF
Sbjct: 121 RQWYLKFNDTVTSFGFKENIVDRCIYLKISGSKFIILVLYVDDILLATNDLGLLRQTKEF 180

Query: 121 LSKNFEMKDMGEASYVIGIEIFRDRTYGLLGLSQKAYINKVLEKFKMDKCSSSVVPIQKG 180
           LSKNFEMKDMGEASYVIGIEI RDR+ G LGLSQKAYINKVLE+FKMDKCS+ +VPIQKG
Sbjct: 181 LSKNFEMKDMGEASYVIGIEISRDRSQGWLGLSQKAYINKVLERFKMDKCSAGIVPIQKG 240

Query: 181 DKFSLMQCPKNEFERNQMETIPYASIVGSLLYAQTCTRPDISFVVGMLGMYQSNPGMDHW 240
           DKFSL QCPKNE ER QME IPYASIVGSL+YAQTCTRP ISF VGMLG YQSNPG+DHW
Sbjct: 241 DKFSLNQCPKNELERKQMEQIPYASIVGSLMYAQTCTRPGISFAVGMLGRYQSNPGIDHW 300

Query: 241 KAAKKVLRYLQGTKDYMLTYKRSDHLEVIGY 272
           KAAKKVLRYLQGTKD MLTYKRSDHLEVIGY
Sbjct: 301 KAAKKVLRYLQGTKDRMLTYKRSDHLEVIGY 331

BLAST of Cmc10g0279401 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 168.3 bits (425), Expect = 8.4e-42
Identity = 94/272 (34.56%), Postives = 153/272 (56.25%), Query Frame = 0

Query: 1   MTLVAHYDLELHQMDVKTAFLNENLDEEVFMNQPEGFMVEGKEHM----VCKLKRSIYGL 60
           + + A Y+  LHQ+D+  AFLN +LDEE++M  P G+     + +    VC LK+SIYGL
Sbjct: 180 LAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGL 239

Query: 61  KQASRQWYLKFNDTITSFGFKENIIDRCIYLKISGSKFIILVLYVDDILLATNDFGLLCQ 120
           KQASRQW+LKF+ T+  FGF ++  D   +LKI+ + F+ +++YVDDI++ +N+   + +
Sbjct: 240 KQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDE 299

Query: 121 TKEFLSKNFEMKDMGEASYVIGIEIFRDRTYGLLGLSQKAYINKVLEKFKMDKCSSSVVP 180
            K  L   F+++D+G   Y +G+EI R      + + Q+ Y   +L++  +  C  S VP
Sbjct: 300 LKSQLKSCFKLRDLGPLKYFLGLEIARSAAG--INICQRKYALDLLDETGLLGCKPSSVP 359

Query: 181 IQKGDKFSLMQCPKNEFERNQMETIPYASIVGSLLYAQTCTRPDISFVVGMLGMYQSNPG 240
           +     FS       +F    ++   Y  ++G L+Y Q  TR DISF V  L  +   P 
Sbjct: 360 MDPSVTFSAHS--GGDF----VDAKAYRRLIGRLMYLQ-ITRLDISFAVNKLSQFSEAPR 419

Query: 241 MDHWKAAKKVLRYLQGTKDYMLTYKRSDHLEV 269
           + H +A  K+L Y++GT    L Y     +++
Sbjct: 420 LAHQQAVMKILHYIKGTVGQGLFYSSQAEMQL 442

BLAST of Cmc10g0279401 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 79.7 bits (195), Expect = 3.9e-15
Identity = 60/174 (34.48%), Postives = 87/174 (50.00%), Query Frame = 0

Query: 97  LVLYVDDILLATNDFGLLCQTKEFLSKNFEMKDMGEASYVIGIEIFRDRTYGLLGLSQKA 156
           L+LYVDDILL  +   LL      LS  F MKD+G   Y +GI+I +    GL  LSQ  
Sbjct: 3   LLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQI-KTHPSGLF-LSQTK 62

Query: 157 YINKVLEKFKMDKCS--SSVVPIQKGDKFSLMQCPKNEFERNQMETIPYASIVGSLLYAQ 216
           Y  ++L    M  C   S+ +P++     S  + P         +   + SIVG+L Y  
Sbjct: 63  YAEQILNNAGMLDCKPMSTPLPLKLNSSVSTAKYP---------DPSDFRSIVGALQYL- 122

Query: 217 TCTRPDISFVVGMLGMYQSNPGMDHWKAAKKVLRYLQGTKDYMLTYKRSDHLEV 269
           T TRPDIS+ V ++      P +  +   K+VLRY++GT  + L   ++  L V
Sbjct: 123 TLTRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNV 164

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0033349.13.6e-14394.46Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m... [more]
KAA0052755.16.1e-14394.46Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m... [more]
TYK04201.16.1e-14394.46Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m... [more]
TYK00088.11.1e-14192.99Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m... [more]
RYE20331.12.5e-13689.30hypothetical protein EOP45_11235, partial [Sphingobacteriaceae bacterium][more]
Match NameE-valueIdentityDescription
P109781.0e-6848.68Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... [more]
P041464.5e-4838.27Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3[more]
Q9ZT942.2e-3936.78Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... [more]
Q94HW22.9e-3936.02Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... [more]
P256001.5e-3031.40Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain AT... [more]
Match NameE-valueIdentityDescription
A0A5A7SVZ51.7e-14394.46Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... [more]
A0A5A7UG952.9e-14394.46Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... [more]
A0A5D3BWW52.9e-14394.46Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... [more]
A0A5D3BLU05.5e-14292.99Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... [more]
A0A4V1T0291.2e-13689.30Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) OS=Sph... [more]
Match NameE-valueIdentityDescription
AT4G23160.18.4e-4234.56cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [more]
ATMG00810.13.9e-1534.48DNA/RNA polymerases superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 3..177
e-value: 7.3E-49
score: 166.6
NoneNo IPR availablePANTHERPTHR45895FAMILY NOT NAMEDcoord: 5..265
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 11..255

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc10g0279401.1Cmc10g0279401.1mRNA