Cmc10g0279341 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc10g0279341
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr10: 16443818 .. 16445716 (-)
RNA-Seq Expression	Cmc10g0279341
Synteny	Cmc10g0279341

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTGCAAGCTGCTCTAGCGCCGTTCCTCGCTGCTCAGCAGAACCAGGCCGCCCCTGTTCAGGACCAGCCCGTCATCCCTCCAGCCCCGGTGGAAGCTCAGCCGGTGCCAGTACAACTGTCAGCTGAGGCCGAACACGAAGAGCACTTGCACCAAGTCTTGGAGACCCTTCGAGCTCATAAGCTATACGCCAAGTTCTCCAAGTGTGAGTTCTGGTTAAAGAAGGTGACATTTTTAGGGCACGTGGTTTCCAGTGAGGGAGTCTCGGTGGACCCAGCTAAGGTCGAAGCGGTGACCATCTGGCCTCGACCGTCTACAGTCAGTGAGATTCGCAGTTTTCTGGGTCTGGCAGGATACTACAGGAGGTTTGTAGAAGACTTCTCACGCATAGCCAGCCCATTGACCCAGTTGACCAGGAAGGGAACCCCTTTTGTCTGGAGCCCAGCATGTGAGAGTAGTTTCCAAGAGCTTAAGCAGAAGCTAGTGACGGCACCAGTCCTGACAGTGCCTGATGGGTCGGGAAGTTTTGTGATCTATAGTGATGCCTCTAAGAAAGGACTGGGATGTGTCCTGATGCAGCAAGGTAAGGTAGTTGCGTATGCCTCACGCCAGTTGAAGAATCATGAGCAGAACTACCCTACCCACGACTTGGAGTTGGCAGCTGTAGTCTTTGCACTGAAGATATGGAGGCACTATCTGTACGGTGAGAAGATTCAGATTTACACCGACCACAAGAGCCTGAAGTATTTCTTCACTCAGAAGGAGTTGAACATGAGGCAGAGGAGGTGGCTCGAGTTGGTGAAAGACTACGACTGCGAGATCCTGTACCATCCAGGTAAAGCAAATGTAGTGGCTGACGCGCTGAGTAGGAAGGTTGCACATTCAGCAGCGCTAGTCACGAAGCAGACCCCCTTACTCAGGGATTTGGAGAGAGCCGAGATTGCAGTCTCAGTAGGTGAGGTTGCCGCACAGTTGGCTCAGTTGACAGTTCAGCCAACCTTGAGGCAAAAGATCATTGCTGCTCAGCTGAGTGATCCTTACTTGGCAGAGAAACGTCGTATGGTAGAGACGGAGCAAGGTGAAGAGTTCTCTATATCCTCTGATGATGGCCTTATGTTTGAGGGACGCCTGTGTGTGCCGGAAGACAGCGCAGTTAAGACAGAGCTTTTGACTGAGGCTCACAGTTCCCCGTTTACCATGCACCCTGGGAGTACGAAGATGTACCAGGACTTAAGGAGTGTCTATTGGTGGAGGGGCATGAAGAGGGATGTAGCAGAGTTCGTCAGTAGGTGCTTGGTGTGCCAGCAGGTGAAGGCACCTAGGCAGCATCCAGCAGGGTTGTTGCAACCCTTGAGTGTGCCAGGGTGGAAGTGGGAGAGTGTGTCGATGGACTTTATCACGGGACTGCCCAAGACCTTGAAGGGCTACACGGTGATCTGGGTTGTGGTCGACAGACTCACGAAGACAGCCCACTTCGTGCCAGGGAAATCCACGTACACTGCCAGCAAGTGGGGGCAGTTATACATGACGGAAATAGTAAGACTGCACGGAGTACCAGTATCCATCGTTTCAGACAGGGATGCCCGTTTCACTTCGAAATTTTGGCAAGGGCTCCAACTTGCATTAGGTACGAGGCTGGACTTCAGCACGGCATTCCACCCTCAGACTGATGGTCAGACAGAGAGACTGAACCAGATTTTGGAGGATATGCTGCGGGCCTGTGTGCTAGAGTTTTCAGGAAGTTGGGACTCCCACCTGCATCTAATGGAGTTCGCCTATAATAACAGTTACCAGGCTACCATTGGTATGGCTCCGTTTGAGGCTCTGTATGGCAAGTGCTGTAGATCCCCTGTCTGCTGGGGCGAGGTTGGAGAGCAGAGGATGCTAGGCCCGAGTTAG

mRNA sequence

ATGCTGCAAGCTGCTCTAGCGCCGTTCCTCGCTGCTCAGCAGAACCAGGCCGCCCCTGTTCAGGACCAGCCCGTCATCCCTCCAGCCCCGGTGGAAGCTCAGCCGGTGCCAGTACAACTGTCAGCTGAGGCCGAACACGAAGAGCACTTGCACCAAGTCTTGGAGACCCTTCGAGCTCATAAGCTATACGCCAAGTTCTCCAAGTGTGAGTTCTGGTTAAAGAAGGTGACATTTTTAGGGCACGTGGTTTCCAGTGAGGGAGTCTCGGTGGACCCAGCTAAGGTCGAAGCGGTGACCATCTGGCCTCGACCGTCTACAGTCAGTGAGATTCGCAGTTTTCTGGGTCTGGCAGGATACTACAGGAGGTTTGTAGAAGACTTCTCACGCATAGCCAGCCCATTGACCCAGTTGACCAGGAAGGGAACCCCTTTTGTCTGGAGCCCAGCATGTGAGAGTAGTTTCCAAGAGCTTAAGCAGAAGCTAGTGACGGCACCAGTCCTGACAGTGCCTGATGGGTCGGGAAGTTTTGTGATCTATAGTGATGCCTCTAAGAAAGGACTGGGATGTGTCCTGATGCAGCAAGGTAAGGTAGTTGCGTATGCCTCACGCCAGTTGAAGAATCATGAGCAGAACTACCCTACCCACGACTTGGAGTTGGCAGCTGTAGTCTTTGCACTGAAGATATGGAGGCACTATCTGTACGGTGAGAAGATTCAGATTTACACCGACCACAAGAGCCTGAAGTATTTCTTCACTCAGAAGGAGTTGAACATGAGGCAGAGGAGGTGGCTCGAGTTGGTGAAAGACTACGACTGCGAGATCCTGTACCATCCAGGTAAAGCAAATGTAGTGGCTGACGCGCTGAGTAGGAAGGTTGCACATTCAGCAGCGCTAGTCACGAAGCAGACCCCCTTACTCAGGGATTTGGAGAGAGCCGAGATTGCAGTCTCAGTAGGTGAGGTTGCCGCACAGTTGGCTCAGTTGACAGTTCAGCCAACCTTGAGGCAAAAGATCATTGCTGCTCAGCTGAGTGATCCTTACTTGGCAGAGAAACGTCGTATGGTAGAGACGGAGCAAGGTGAAGAGTTCTCTATATCCTCTGATGATGGCCTTATGTTTGAGGGACGCCTGTGTGTGCCGGAAGACAGCGCAGTTAAGACAGAGCTTTTGACTGAGGCTCACAGTTCCCCGTTTACCATGCACCCTGGGAGTACGAAGATGTACCAGGACTTAAGGAGTGTCTATTGGTGGAGGGGCATGAAGAGGGATGTAGCAGAGTTCGTCAGTAGGTGCTTGGTGTGCCAGCAGGTGAAGGCACCTAGGCAGCATCCAGCAGGGTTGTTGCAACCCTTGAGTGTGCCAGGGTGGAAGTGGGAGAGTGTGTCGATGGACTTTATCACGGGACTGCCCAAGACCTTGAAGGGCTACACGGTGATCTGGGTTGTGGTCGACAGACTCACGAAGACAGCCCACTTCGTGCCAGGGAAATCCACGTACACTGCCAGCAAGTGGGGGCAGTTATACATGACGGAAATAGTAAGACTGCACGGAGTACCAGTATCCATCGTTTCAGACAGGGATGCCCGTTTCACTTCGAAATTTTGGCAAGGGCTCCAACTTGCATTAGGTACGAGGCTGGACTTCAGCACGGCATTCCACCCTCAGACTGATGGTCAGACAGAGAGACTGAACCAGATTTTGGAGGATATGCTGCGGGCCTGTGTGCTAGAGTTTTCAGGAAGTTGGGACTCCCACCTGCATCTAATGGAGTTCGCCTATAATAACAGTTACCAGGCTACCATTGGTATGGCTCCGTTTGAGGCTCTGTATGGCAAGTGCTGTAGATCCCCTGTCTGCTGGGGCGAGGTTGGAGAGCAGAGGATGCTAGGCCCGAGTTAG

Coding sequence (CDS)

ATGCTGCAAGCTGCTCTAGCGCCGTTCCTCGCTGCTCAGCAGAACCAGGCCGCCCCTGTTCAGGACCAGCCCGTCATCCCTCCAGCCCCGGTGGAAGCTCAGCCGGTGCCAGTACAACTGTCAGCTGAGGCCGAACACGAAGAGCACTTGCACCAAGTCTTGGAGACCCTTCGAGCTCATAAGCTATACGCCAAGTTCTCCAAGTGTGAGTTCTGGTTAAAGAAGGTGACATTTTTAGGGCACGTGGTTTCCAGTGAGGGAGTCTCGGTGGACCCAGCTAAGGTCGAAGCGGTGACCATCTGGCCTCGACCGTCTACAGTCAGTGAGATTCGCAGTTTTCTGGGTCTGGCAGGATACTACAGGAGGTTTGTAGAAGACTTCTCACGCATAGCCAGCCCATTGACCCAGTTGACCAGGAAGGGAACCCCTTTTGTCTGGAGCCCAGCATGTGAGAGTAGTTTCCAAGAGCTTAAGCAGAAGCTAGTGACGGCACCAGTCCTGACAGTGCCTGATGGGTCGGGAAGTTTTGTGATCTATAGTGATGCCTCTAAGAAAGGACTGGGATGTGTCCTGATGCAGCAAGGTAAGGTAGTTGCGTATGCCTCACGCCAGTTGAAGAATCATGAGCAGAACTACCCTACCCACGACTTGGAGTTGGCAGCTGTAGTCTTTGCACTGAAGATATGGAGGCACTATCTGTACGGTGAGAAGATTCAGATTTACACCGACCACAAGAGCCTGAAGTATTTCTTCACTCAGAAGGAGTTGAACATGAGGCAGAGGAGGTGGCTCGAGTTGGTGAAAGACTACGACTGCGAGATCCTGTACCATCCAGGTAAAGCAAATGTAGTGGCTGACGCGCTGAGTAGGAAGGTTGCACATTCAGCAGCGCTAGTCACGAAGCAGACCCCCTTACTCAGGGATTTGGAGAGAGCCGAGATTGCAGTCTCAGTAGGTGAGGTTGCCGCACAGTTGGCTCAGTTGACAGTTCAGCCAACCTTGAGGCAAAAGATCATTGCTGCTCAGCTGAGTGATCCTTACTTGGCAGAGAAACGTCGTATGGTAGAGACGGAGCAAGGTGAAGAGTTCTCTATATCCTCTGATGATGGCCTTATGTTTGAGGGACGCCTGTGTGTGCCGGAAGACAGCGCAGTTAAGACAGAGCTTTTGACTGAGGCTCACAGTTCCCCGTTTACCATGCACCCTGGGAGTACGAAGATGTACCAGGACTTAAGGAGTGTCTATTGGTGGAGGGGCATGAAGAGGGATGTAGCAGAGTTCGTCAGTAGGTGCTTGGTGTGCCAGCAGGTGAAGGCACCTAGGCAGCATCCAGCAGGGTTGTTGCAACCCTTGAGTGTGCCAGGGTGGAAGTGGGAGAGTGTGTCGATGGACTTTATCACGGGACTGCCCAAGACCTTGAAGGGCTACACGGTGATCTGGGTTGTGGTCGACAGACTCACGAAGACAGCCCACTTCGTGCCAGGGAAATCCACGTACACTGCCAGCAAGTGGGGGCAGTTATACATGACGGAAATAGTAAGACTGCACGGAGTACCAGTATCCATCGTTTCAGACAGGGATGCCCGTTTCACTTCGAAATTTTGGCAAGGGCTCCAACTTGCATTAGGTACGAGGCTGGACTTCAGCACGGCATTCCACCCTCAGACTGATGGTCAGACAGAGAGACTGAACCAGATTTTGGAGGATATGCTGCGGGCCTGTGTGCTAGAGTTTTCAGGAAGTTGGGACTCCCACCTGCATCTAATGGAGTTCGCCTATAATAACAGTTACCAGGCTACCATTGGTATGGCTCCGTTTGAGGCTCTGTATGGCAAGTGCTGTAGATCCCCTGTCTGCTGGGGCGAGGTTGGAGAGCAGAGGATGCTAGGCCCGAGTTAG

Protein sequence

MLQAALAPFLAAQQNQAAPVQDQPVIPPAPVEAQPVPVQLSAEAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKVEAVTIWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKNHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALVTKQTPLLRDLERAEIAVSVGEVAAQLAQLTVQPTLRQKIIAAQLSDPYLAEKRRMVETEQGEEFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPS

Homology

[Close]

BLAST of Cmc10g0279341 vs. NCBI nr
Match: KAA0025917.1 (pol protein [Cucumis melo var. makuwa] >KAA0042949.1 pol protein [Cucumis melo var. makuwa] >KAA0048622.1 pol protein [Cucumis melo var. makuwa] >KAA0056306.1 pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1193.3 bits (3086), Expect = 0.0e+00
Identity = 585/589 (99.32%), Postives = 587/589 (99.66%), Query Frame = 0


Query: 43   EAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKVEAVTIWP 102
            EAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKVEAVT WP
Sbjct: 771  EAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKVEAVTNWP 830

Query: 103  RPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLV 162
            RPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLV
Sbjct: 831  RPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLV 890

Query: 163  TAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKNHEQNYPTHDLELAAV 222
            TAPVLTVPDGSGSFVIYSDASKKGLG VLMQQGKVVAYASRQLKNHE+NYPTHDLELAAV
Sbjct: 891  TAPVLTVPDGSGSFVIYSDASKKGLGGVLMQQGKVVAYASRQLKNHERNYPTHDLELAAV 950

Query: 223  VFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKAN 282
            VFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKAN
Sbjct: 951  VFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKAN 1010

Query: 283  VVADALSRKVAHSAALVTKQTPLLRDLERAEIAVSVGEVAAQLAQLTVQPTLRQKIIAAQ 342
            VVADALSRKVAHSAAL+TKQTPLLRDLERAEIAVSVGEVAAQLAQLTVQPTLRQKIIAAQ
Sbjct: 1011 VVADALSRKVAHSAALITKQTPLLRDLERAEIAVSVGEVAAQLAQLTVQPTLRQKIIAAQ 1070

Query: 343  LSDPYLAEKRRMVETEQGEEFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHP 402
            LSDPYLAEKRRMVETEQGEEFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHP
Sbjct: 1071 LSDPYLAEKRRMVETEQGEEFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHP 1130

Query: 403  GSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVS 462
            GSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVS
Sbjct: 1131 GSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVS 1190

Query: 463  MDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSI 522
            MDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSI
Sbjct: 1191 MDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSI 1250

Query: 523  VSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSW 582
            VSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSW
Sbjct: 1251 VSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSW 1310

Query: 583  DSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGP 632
            DSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGP
Sbjct: 1311 DSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGP 1359

[Close]

BLAST of Cmc10g0279341 vs. NCBI nr
Match: KAA0025917.1 (pol protein [Cucumis melo var. makuwa] >KAA0042949.1 pol protein [Cucumis melo var. makuwa] >KAA0048622.1 pol protein [Cucumis melo var. makuwa] >KAA0056306.1 pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 75.1 bits (183), Expect = 2.4e-09
Identity = 45/57 (78.95%), Postives = 46/57 (80.70%), Query Frame = 0


Query: 1   MLQAALAPFLAAQQNQA-----------APVQDQPVIPPAPVEAQPVPVQLSAEAEH 47
           MLQAALAPFLAAQQNQA           APVQDQPVIPPAPVEAQPVPVQLSAEA+H
Sbjct: 59  MLQAALAPFLAAQQNQAAPVQDQPVVPPAPVQDQPVIPPAPVEAQPVPVQLSAEAKH 115

HSP 2 Score: 1173.3 bits (3034), Expect = 0.0e+00
Identity = 571/589 (96.94%), Postives = 582/589 (98.81%), Query Frame = 0


Query: 43   EAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKVEAVTIWP 102
            EA+HEEHLHQVLETLRA+KLYAKFSKCEFWL+KVTFLGHVVSSEGVSVDPAK+EAVT WP
Sbjct: 734  EAKHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWP 793

Query: 103  RPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLV 162
            RPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACE SFQELKQKLV
Sbjct: 794  RPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLV 853

Query: 163  TAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKNHEQNYPTHDLELAAV 222
            TAPVLTVPDGSG+FVIYSDASKKGLGCVLMQQGKVVAYASRQLK HEQNYPTHDLELAAV
Sbjct: 854  TAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAV 913

Query: 223  VFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKAN 282
            VFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKAN
Sbjct: 914  VFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKAN 973

Query: 283  VVADALSRKVAHSAALVTKQTPLLRDLERAEIAVSVGEVAAQLAQLTVQPTLRQKIIAAQ 342
            VVADALSRKVAHSAAL+TKQTPLLRD ERAEIAVSVGEV AQLAQLTVQPTLRQKIIAAQ
Sbjct: 974  VVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQ 1033

Query: 343  LSDPYLAEKRRMVETEQGEEFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHP 402
            L DPYLAEKRR+VETEQGE FSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHP
Sbjct: 1034 LDDPYLAEKRRVVETEQGEGFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHP 1093

Query: 403  GSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVS 462
            GSTKMYQDLRSVYWWRGMKRDVA+FVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVS
Sbjct: 1094 GSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVS 1153

Query: 463  MDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSI 522
            MDFITGLPKTLKGYTVIWVVVDRLTK+AHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSI
Sbjct: 1154 MDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSI 1213

Query: 523  VSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSW 582
            VSDRDARFTSKFW+GLQ+ALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSW
Sbjct: 1214 VSDRDARFTSKFWKGLQIALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSW 1273

Query: 583  DSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGP 632
            DSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGP
Sbjct: 1274 DSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGP 1322

[Close]

BLAST of Cmc10g0279341 vs. NCBI nr
Match: KAA0050760.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 71.2 bits (173), Expect = 3.5e-08
Identity = 40/46 (86.96%), Postives = 41/46 (89.13%), Query Frame = 0


Query: 1  MLQAALAPFLAAQQNQAAPVQDQPVIPPAPVEAQPVPVQLSAEAEH 47
          MLQAALAPFLA QQNQAAPVQ Q V PPAP EAQPVPVQLSAEA+H
Sbjct: 53 MLQAALAPFLAPQQNQAAPVQAQAVAPPAPEEAQPVPVQLSAEAKH 98

HSP 2 Score: 1172.5 bits (3032), Expect = 0.0e+00
Identity = 570/589 (96.77%), Postives = 581/589 (98.64%), Query Frame = 0


Query: 43  EAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKVEAVTIWP 102
           EAEHEEHLHQVLETLRA+KLY KFSKCEFWL+KVTFLGHVVSSEGVSVDPAK+EAVT WP
Sbjct: 30  EAEHEEHLHQVLETLRANKLYVKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWP 89

Query: 103 RPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLV 162
           RPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACE SFQELKQKLV
Sbjct: 90  RPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLV 149

Query: 163 TAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKNHEQNYPTHDLELAAV 222
           TAPVLTVPDGSG+FVIYSDASKKGLGCVLMQQGKVVAYASRQLK HEQNYPTHDLELAAV
Sbjct: 150 TAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAV 209

Query: 223 VFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKAN 282
           VFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKAN
Sbjct: 210 VFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKAN 269

Query: 283 VVADALSRKVAHSAALVTKQTPLLRDLERAEIAVSVGEVAAQLAQLTVQPTLRQKIIAAQ 342
           VVADALSRKVAHSAAL+TKQTPLLRD ERAEIAVSVGEV AQLAQLTVQPTLRQKIIAAQ
Sbjct: 270 VVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQ 329

Query: 343 LSDPYLAEKRRMVETEQGEEFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHP 402
           L DPYLAEKRR+VETEQGE FSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHP
Sbjct: 330 LDDPYLAEKRRVVETEQGEGFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHP 389

Query: 403 GSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVS 462
           GSTKMYQDLRSVYWWRGMKRDVA+FVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVS
Sbjct: 390 GSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVS 449

Query: 463 MDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSI 522
           MDFITGLPKTL+GYTVIWVVVDRLTK+AHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSI
Sbjct: 450 MDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSI 509

Query: 523 VSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSW 582
           +SDRDARFTSKFW+GLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSW
Sbjct: 510 ISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSW 569

Query: 583 DSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGP 632
           DSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGP
Sbjct: 570 DSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGP 618

[Close]

BLAST of Cmc10g0279341 vs. NCBI nr
Match: TYK20443.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1171.8 bits (3030), Expect = 0.0e+00
Identity = 571/589 (96.94%), Postives = 581/589 (98.64%), Query Frame = 0


Query: 43   EAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKVEAVTIWP 102
            EAEHEEHLHQVLETLRA+KLYAKFSKCEFWL+KVTFLGHVVSSEGVSVDPAK+EAVT W 
Sbjct: 1090 EAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWT 1149

Query: 103  RPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLV 162
            RPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACE SFQELKQKLV
Sbjct: 1150 RPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLV 1209

Query: 163  TAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKNHEQNYPTHDLELAAV 222
            TAPVLTVPDGSG+FVIYSDASKKGLGCVLMQQGKVVAYASRQLK HEQNYPTHDLELAAV
Sbjct: 1210 TAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAV 1269

Query: 223  VFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKAN 282
            VFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKAN
Sbjct: 1270 VFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKAN 1329

Query: 283  VVADALSRKVAHSAALVTKQTPLLRDLERAEIAVSVGEVAAQLAQLTVQPTLRQKIIAAQ 342
            VVADALSRKVAHSAAL+TKQTPLLRD ERAEIAVSVGEV AQLAQLTVQPTLRQKIIAAQ
Sbjct: 1330 VVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQ 1389

Query: 343  LSDPYLAEKRRMVETEQGEEFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHP 402
            L DPYLAEKRR+VETEQGE FSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHP
Sbjct: 1390 LDDPYLAEKRRVVETEQGEGFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHP 1449

Query: 403  GSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVS 462
            GSTKMYQDLRSVYWWRGMKRDVA+FVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVS
Sbjct: 1450 GSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVS 1509

Query: 463  MDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSI 522
            MDFITGLPKTLKGYTVIWVVVDRLTK+AHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSI
Sbjct: 1510 MDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSI 1569

Query: 523  VSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSW 582
            VSDRDARFTSKFW+GLQ+ALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSW
Sbjct: 1570 VSDRDARFTSKFWKGLQIALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSW 1629

Query: 583  DSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGP 632
            DSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGP
Sbjct: 1630 DSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGP 1678

[Close]

BLAST of Cmc10g0279341 vs. NCBI nr
Match: KAA0025998.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1171.8 bits (3030), Expect = 0.0e+00
Identity = 571/589 (96.94%), Postives = 581/589 (98.64%), Query Frame = 0


Query: 43   EAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKVEAVTIWP 102
            EAEHEEHLHQVLETLRA+KLYAKFSKCEFWL+KVTFLGHVVSSEGVSVDPAK+EAVT W 
Sbjct: 754  EAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWT 813

Query: 103  RPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLV 162
            RPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACE SFQELKQKLV
Sbjct: 814  RPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLV 873

Query: 163  TAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKNHEQNYPTHDLELAAV 222
            TAPVLTVPDGSG+FVIYSDASKKGLGCVLMQQGKVVAYASRQLK HEQNYPTHDLELAAV
Sbjct: 874  TAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAV 933

Query: 223  VFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKAN 282
            VFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKAN
Sbjct: 934  VFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKAN 993

Query: 283  VVADALSRKVAHSAALVTKQTPLLRDLERAEIAVSVGEVAAQLAQLTVQPTLRQKIIAAQ 342
            VVADALSRKVAHSAAL+TKQTPLLRD ERAEIAVSVGEV AQLAQLTVQPTLRQKIIAAQ
Sbjct: 994  VVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQ 1053

Query: 343  LSDPYLAEKRRMVETEQGEEFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHP 402
            L DPYLAEKRR+VETEQGE FSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHP
Sbjct: 1054 LDDPYLAEKRRVVETEQGEGFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHP 1113

Query: 403  GSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVS 462
            GSTKMYQDLRSVYWWRGMKRDVA+FVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVS
Sbjct: 1114 GSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVS 1173

Query: 463  MDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSI 522
            MDFITGLPKTLKGYTVIWVVVDRLTK+AHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSI
Sbjct: 1174 MDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSI 1233

Query: 523  VSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSW 582
            VSDRDARFTSKFW+GLQ+ALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSW
Sbjct: 1234 VSDRDARFTSKFWKGLQIALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSW 1293

Query: 583  DSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGP 632
            DSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGP
Sbjct: 1294 DSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGP 1342

[Close]

BLAST of Cmc10g0279341 vs. ExPASy Swiss-Prot
Match: Q9UR07 (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 1.4e-84
Identity = 182/584 (31.16%), Postives = 300/584 (51.37%), Query Frame = 0


Query: 38   VQLSAEAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKVEA 97
            +   +E+EH +H+  VL+ L+   L    +KCEF   +V F+G+ +S +G +     ++ 
Sbjct: 570  IHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDK 629

Query: 98   VTIWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQEL 157
            V  W +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+P    + + +
Sbjct: 630  VLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENI 689

Query: 158  KQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKNHEQNY 217
            KQ LV+ PVL   D S   ++ +DAS   +G VL Q+        V Y S ++   + NY
Sbjct: 690  KQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNY 749

Query: 218  PTHDLELAAVVFALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVK 277
               D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++
Sbjct: 750  SVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQ 809

Query: 278  DYDCEILYHPGKANVVADALSRKVAHSAALVTKQTPLLRDLERAEIAVSVGEVAAQLAQL 337
            D++ EI Y PG AN +ADALSR       +V +  P+ +D E   I          + Q+
Sbjct: 810  DFNFEINYRPGSANHIADALSR-------IVDETEPIPKDSEDNSINF--------VNQI 869

Query: 338  TVQPTLRQKIIAAQLSDPYLAEKRRMVETEQGEEFSISSDDGLMFEGR--LCVPEDSAVK 397
            ++    + +++    +D  L     +   ++  E +I   DGL+   +  + +P D+ + 
Sbjct: 870  SITDDFKNQVVTEYTNDTKLL--NLLNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLT 929

Query: 398  TELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAG 457
              ++ + H     +HPG   +   +   + W+G+++ + E+V  C  CQ  K+    P G
Sbjct: 930  RTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYG 989

Query: 458  LLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQ 517
             LQP+      WES+SMDFIT LP++  GY  ++VVVDR +K A  VP   + TA +  +
Sbjct: 990  PLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTAR 1049

Query: 518  LYMTEIVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQI 577
            ++   ++   G P  I++D D  FTS+ W+         + FS  + PQTDGQTER NQ 
Sbjct: 1050 MFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQT 1109

Query: 578  LEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALY 611
            +E +LR        +W  H+ L++ +YNN+  +   M PFE ++
Sbjct: 1110 VEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVH 1135

[Close]

BLAST of Cmc10g0279341 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 1.4e-84
Identity = 182/584 (31.16%), Postives = 300/584 (51.37%), Query Frame = 0


Query: 38   VQLSAEAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKVEA 97
            +   +E+EH +H+  VL+ L+   L    +KCEF   +V F+G+ +S +G +     ++ 
Sbjct: 570  IHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDK 629

Query: 98   VTIWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQEL 157
            V  W +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+P    + + +
Sbjct: 630  VLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENI 689

Query: 158  KQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKNHEQNY 217
            KQ LV+ PVL   D S   ++ +DAS   +G VL Q+        V Y S ++   + NY
Sbjct: 690  KQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNY 749

Query: 218  PTHDLELAAVVFALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVK 277
               D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++
Sbjct: 750  SVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQ 809

Query: 278  DYDCEILYHPGKANVVADALSRKVAHSAALVTKQTPLLRDLERAEIAVSVGEVAAQLAQL 337
            D++ EI Y PG AN +ADALSR       +V +  P+ +D E   I          + Q+
Sbjct: 810  DFNFEINYRPGSANHIADALSR-------IVDETEPIPKDSEDNSINF--------VNQI 869

Query: 338  TVQPTLRQKIIAAQLSDPYLAEKRRMVETEQGEEFSISSDDGLMFEGR--LCVPEDSAVK 397
            ++    + +++    +D  L     +   ++  E +I   DGL+   +  + +P D+ + 
Sbjct: 870  SITDDFKNQVVTEYTNDTKLL--NLLNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLT 929

Query: 398  TELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAG 457
              ++ + H     +HPG   +   +   + W+G+++ + E+V  C  CQ  K+    P G
Sbjct: 930  RTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYG 989

Query: 458  LLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQ 517
             LQP+      WES+SMDFIT LP++  GY  ++VVVDR +K A  VP   + TA +  +
Sbjct: 990  PLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTAR 1049

Query: 518  LYMTEIVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQI 577
            ++   ++   G P  I++D D  FTS+ W+         + FS  + PQTDGQTER NQ 
Sbjct: 1050 MFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQT 1109

Query: 578  LEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALY 611
            +E +LR        +W  H+ L++ +YNN+  +   M PFE ++
Sbjct: 1110 VEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVH 1135

[Close]

BLAST of Cmc10g0279341 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 1.4e-84
Identity = 182/584 (31.16%), Postives = 300/584 (51.37%), Query Frame = 0


Query: 38   VQLSAEAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKVEA 97
            +   +E+EH +H+  VL+ L+   L    +KCEF   +V F+G+ +S +G +     ++ 
Sbjct: 570  IHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDK 629

Query: 98   VTIWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQEL 157
            V  W +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+P    + + +
Sbjct: 630  VLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENI 689

Query: 158  KQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKNHEQNY 217
            KQ LV+ PVL   D S   ++ +DAS   +G VL Q+        V Y S ++   + NY
Sbjct: 690  KQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNY 749

Query: 218  PTHDLELAAVVFALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVK 277
               D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++
Sbjct: 750  SVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQ 809

Query: 278  DYDCEILYHPGKANVVADALSRKVAHSAALVTKQTPLLRDLERAEIAVSVGEVAAQLAQL 337
            D++ EI Y PG AN +ADALSR       +V +  P+ +D E   I          + Q+
Sbjct: 810  DFNFEINYRPGSANHIADALSR-------IVDETEPIPKDSEDNSINF--------VNQI 869

Query: 338  TVQPTLRQKIIAAQLSDPYLAEKRRMVETEQGEEFSISSDDGLMFEGR--LCVPEDSAVK 397
            ++    + +++    +D  L     +   ++  E +I   DGL+   +  + +P D+ + 
Sbjct: 870  SITDDFKNQVVTEYTNDTKLL--NLLNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLT 929

Query: 398  TELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAG 457
              ++ + H     +HPG   +   +   + W+G+++ + E+V  C  CQ  K+    P G
Sbjct: 930  RTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYG 989

Query: 458  LLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQ 517
             LQP+      WES+SMDFIT LP++  GY  ++VVVDR +K A  VP   + TA +  +
Sbjct: 990  PLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTAR 1049

Query: 518  LYMTEIVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQI 577
            ++   ++   G P  I++D D  FTS+ W+         + FS  + PQTDGQTER NQ 
Sbjct: 1050 MFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQT 1109

Query: 578  LEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALY 611
            +E +LR        +W  H+ L++ +YNN+  +   M PFE ++
Sbjct: 1110 VEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVH 1135

[Close]

BLAST of Cmc10g0279341 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 1.4e-84
Identity = 182/584 (31.16%), Postives = 300/584 (51.37%), Query Frame = 0


Query: 38   VQLSAEAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKVEA 97
            +   +E+EH +H+  VL+ L+   L    +KCEF   +V F+G+ +S +G +     ++ 
Sbjct: 570  IHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDK 629

Query: 98   VTIWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQEL 157
            V  W +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+P    + + +
Sbjct: 630  VLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENI 689

Query: 158  KQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKNHEQNY 217
            KQ LV+ PVL   D S   ++ +DAS   +G VL Q+        V Y S ++   + NY
Sbjct: 690  KQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNY 749

Query: 218  PTHDLELAAVVFALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVK 277
               D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++
Sbjct: 750  SVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQ 809

Query: 278  DYDCEILYHPGKANVVADALSRKVAHSAALVTKQTPLLRDLERAEIAVSVGEVAAQLAQL 337
            D++ EI Y PG AN +ADALSR       +V +  P+ +D E   I          + Q+
Sbjct: 810  DFNFEINYRPGSANHIADALSR-------IVDETEPIPKDSEDNSINF--------VNQI 869

Query: 338  TVQPTLRQKIIAAQLSDPYLAEKRRMVETEQGEEFSISSDDGLMFEGR--LCVPEDSAVK 397
            ++    + +++    +D  L     +   ++  E +I   DGL+   +  + +P D+ + 
Sbjct: 870  SITDDFKNQVVTEYTNDTKLL--NLLNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLT 929

Query: 398  TELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAG 457
              ++ + H     +HPG   +   +   + W+G+++ + E+V  C  CQ  K+    P G
Sbjct: 930  RTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYG 989

Query: 458  LLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQ 517
             LQP+      WES+SMDFIT LP++  GY  ++VVVDR +K A  VP   + TA +  +
Sbjct: 990  PLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTAR 1049

Query: 518  LYMTEIVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQI 577
            ++   ++   G P  I++D D  FTS+ W+         + FS  + PQTDGQTER NQ 
Sbjct: 1050 MFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQT 1109

Query: 578  LEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALY 611
            +E +LR        +W  H+ L++ +YNN+  +   M PFE ++
Sbjct: 1110 VEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVH 1135

[Close]

BLAST of Cmc10g0279341 vs. ExPASy Swiss-Prot
Match: P0CT36 (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-3 PE=1 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 1.4e-84
Identity = 182/584 (31.16%), Postives = 300/584 (51.37%), Query Frame = 0


Query: 38   VQLSAEAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKVEA 97
            +   +E+EH +H+  VL+ L+   L    +KCEF   +V F+G+ +S +G +     ++ 
Sbjct: 570  IHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDK 629

Query: 98   VTIWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQEL 157
            V  W +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+P    + + +
Sbjct: 630  VLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENI 689

Query: 158  KQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKNHEQNY 217
            KQ LV+ PVL   D S   ++ +DAS   +G VL Q+        V Y S ++   + NY
Sbjct: 690  KQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNY 749

Query: 218  PTHDLELAAVVFALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVK 277
               D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++
Sbjct: 750  SVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQ 809

Query: 278  DYDCEILYHPGKANVVADALSRKVAHSAALVTKQTPLLRDLERAEIAVSVGEVAAQLAQL 337
            D++ EI Y PG AN +ADALSR       +V +  P+ +D E   I          + Q+
Sbjct: 810  DFNFEINYRPGSANHIADALSR-------IVDETEPIPKDSEDNSINF--------VNQI 869

Query: 338  TVQPTLRQKIIAAQLSDPYLAEKRRMVETEQGEEFSISSDDGLMFEGR--LCVPEDSAVK 397
            ++    + +++    +D  L     +   ++  E +I   DGL+   +  + +P D+ + 
Sbjct: 870  SITDDFKNQVVTEYTNDTKLL--NLLNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLT 929

Query: 398  TELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAG 457
              ++ + H     +HPG   +   +   + W+G+++ + E+V  C  CQ  K+    P G
Sbjct: 930  RTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYG 989

Query: 458  LLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQ 517
             LQP+      WES+SMDFIT LP++  GY  ++VVVDR +K A  VP   + TA +  +
Sbjct: 990  PLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTAR 1049

Query: 518  LYMTEIVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQI 577
            ++   ++   G P  I++D D  FTS+ W+         + FS  + PQTDGQTER NQ 
Sbjct: 1050 MFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQT 1109

Query: 578  LEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALY 611
            +E +LR        +W  H+ L++ +YNN+  +   M PFE ++
Sbjct: 1110 VEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVH 1135

[Close]

BLAST of Cmc10g0279341 vs. ExPASy TrEMBL
Match: A0A5A7TP01 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1484G00070 PE=4 SV=1)

HSP 1 Score: 1193.3 bits (3086), Expect = 0.0e+00
Identity = 585/589 (99.32%), Postives = 587/589 (99.66%), Query Frame = 0


Query: 43   EAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKVEAVTIWP 102
            EAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKVEAVT WP
Sbjct: 771  EAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKVEAVTNWP 830

Query: 103  RPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLV 162
            RPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLV
Sbjct: 831  RPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLV 890

Query: 163  TAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKNHEQNYPTHDLELAAV 222
            TAPVLTVPDGSGSFVIYSDASKKGLG VLMQQGKVVAYASRQLKNHE+NYPTHDLELAAV
Sbjct: 891  TAPVLTVPDGSGSFVIYSDASKKGLGGVLMQQGKVVAYASRQLKNHERNYPTHDLELAAV 950

Query: 223  VFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKAN 282
            VFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKAN
Sbjct: 951  VFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKAN 1010

Query: 283  VVADALSRKVAHSAALVTKQTPLLRDLERAEIAVSVGEVAAQLAQLTVQPTLRQKIIAAQ 342
            VVADALSRKVAHSAAL+TKQTPLLRDLERAEIAVSVGEVAAQLAQLTVQPTLRQKIIAAQ
Sbjct: 1011 VVADALSRKVAHSAALITKQTPLLRDLERAEIAVSVGEVAAQLAQLTVQPTLRQKIIAAQ 1070

Query: 343  LSDPYLAEKRRMVETEQGEEFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHP 402
            LSDPYLAEKRRMVETEQGEEFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHP
Sbjct: 1071 LSDPYLAEKRRMVETEQGEEFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHP 1130

Query: 403  GSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVS 462
            GSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVS
Sbjct: 1131 GSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVS 1190

Query: 463  MDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSI 522
            MDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSI
Sbjct: 1191 MDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSI 1250

Query: 523  VSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSW 582
            VSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSW
Sbjct: 1251 VSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSW 1310

Query: 583  DSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGP 632
            DSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGP
Sbjct: 1311 DSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGP 1359

[Close]

BLAST of Cmc10g0279341 vs. ExPASy TrEMBL
Match: A0A5A7TP01 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1484G00070 PE=4 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 1.2e-09
Identity = 45/57 (78.95%), Postives = 46/57 (80.70%), Query Frame = 0


Query: 1   MLQAALAPFLAAQQNQA-----------APVQDQPVIPPAPVEAQPVPVQLSAEAEH 47
           MLQAALAPFLAAQQNQA           APVQDQPVIPPAPVEAQPVPVQLSAEA+H
Sbjct: 59  MLQAALAPFLAAQQNQAAPVQDQPVVPPAPVQDQPVIPPAPVEAQPVPVQLSAEAKH 115

HSP 2 Score: 1173.3 bits (3034), Expect = 0.0e+00
Identity = 571/589 (96.94%), Postives = 582/589 (98.81%), Query Frame = 0


Query: 43   EAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKVEAVTIWP 102
            EA+HEEHLHQVLETLRA+KLYAKFSKCEFWL+KVTFLGHVVSSEGVSVDPAK+EAVT WP
Sbjct: 734  EAKHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWP 793

Query: 103  RPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLV 162
            RPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACE SFQELKQKLV
Sbjct: 794  RPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLV 853

Query: 163  TAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKNHEQNYPTHDLELAAV 222
            TAPVLTVPDGSG+FVIYSDASKKGLGCVLMQQGKVVAYASRQLK HEQNYPTHDLELAAV
Sbjct: 854  TAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAV 913

Query: 223  VFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKAN 282
            VFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKAN
Sbjct: 914  VFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKAN 973

Query: 283  VVADALSRKVAHSAALVTKQTPLLRDLERAEIAVSVGEVAAQLAQLTVQPTLRQKIIAAQ 342
            VVADALSRKVAHSAAL+TKQTPLLRD ERAEIAVSVGEV AQLAQLTVQPTLRQKIIAAQ
Sbjct: 974  VVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQ 1033

Query: 343  LSDPYLAEKRRMVETEQGEEFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHP 402
            L DPYLAEKRR+VETEQGE FSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHP
Sbjct: 1034 LDDPYLAEKRRVVETEQGEGFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHP 1093

Query: 403  GSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVS 462
            GSTKMYQDLRSVYWWRGMKRDVA+FVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVS
Sbjct: 1094 GSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVS 1153

Query: 463  MDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSI 522
            MDFITGLPKTLKGYTVIWVVVDRLTK+AHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSI
Sbjct: 1154 MDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSI 1213

Query: 523  VSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSW 582
            VSDRDARFTSKFW+GLQ+ALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSW
Sbjct: 1214 VSDRDARFTSKFWKGLQIALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSW 1273

Query: 583  DSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGP 632
            DSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGP
Sbjct: 1274 DSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGP 1322

[Close]

BLAST of Cmc10g0279341 vs. ExPASy TrEMBL
Match: A0A5A7U6G5 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold404G00090 PE=4 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.7e-08
Identity = 40/46 (86.96%), Postives = 41/46 (89.13%), Query Frame = 0


Query: 1  MLQAALAPFLAAQQNQAAPVQDQPVIPPAPVEAQPVPVQLSAEAEH 47
          MLQAALAPFLA QQNQAAPVQ Q V PPAP EAQPVPVQLSAEA+H
Sbjct: 53 MLQAALAPFLAPQQNQAAPVQAQAVAPPAPEEAQPVPVQLSAEAKH 98

HSP 2 Score: 1172.5 bits (3032), Expect = 0.0e+00
Identity = 570/589 (96.77%), Postives = 581/589 (98.64%), Query Frame = 0


Query: 43  EAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKVEAVTIWP 102
           EAEHEEHLHQVLETLRA+KLY KFSKCEFWL+KVTFLGHVVSSEGVSVDPAK+EAVT WP
Sbjct: 30  EAEHEEHLHQVLETLRANKLYVKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWP 89

Query: 103 RPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLV 162
           RPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACE SFQELKQKLV
Sbjct: 90  RPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLV 149

Query: 163 TAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKNHEQNYPTHDLELAAV 222
           TAPVLTVPDGSG+FVIYSDASKKGLGCVLMQQGKVVAYASRQLK HEQNYPTHDLELAAV
Sbjct: 150 TAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAV 209

Query: 223 VFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKAN 282
           VFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKAN
Sbjct: 210 VFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKAN 269

Query: 283 VVADALSRKVAHSAALVTKQTPLLRDLERAEIAVSVGEVAAQLAQLTVQPTLRQKIIAAQ 342
           VVADALSRKVAHSAAL+TKQTPLLRD ERAEIAVSVGEV AQLAQLTVQPTLRQKIIAAQ
Sbjct: 270 VVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQ 329

Query: 343 LSDPYLAEKRRMVETEQGEEFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHP 402
           L DPYLAEKRR+VETEQGE FSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHP
Sbjct: 330 LDDPYLAEKRRVVETEQGEGFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHP 389

Query: 403 GSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVS 462
           GSTKMYQDLRSVYWWRGMKRDVA+FVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVS
Sbjct: 390 GSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVS 449

Query: 463 MDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSI 522
           MDFITGLPKTL+GYTVIWVVVDRLTK+AHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSI
Sbjct: 450 MDFITGLPKTLRGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSI 509

Query: 523 VSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSW 582
           +SDRDARFTSKFW+GLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSW
Sbjct: 510 ISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSW 569

Query: 583 DSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGP 632
           DSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGP
Sbjct: 570 DSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGP 618

[Close]

BLAST of Cmc10g0279341 vs. ExPASy TrEMBL
Match: A0A5D3BTN0 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G001560 PE=4 SV=1)

HSP 1 Score: 1171.8 bits (3030), Expect = 0.0e+00
Identity = 571/589 (96.94%), Postives = 581/589 (98.64%), Query Frame = 0


Query: 43   EAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKVEAVTIWP 102
            EAEHEEHLHQVLETLRA+KLYAKFSKCEFWL+KVTFLGHVVSSEGVSVDPAK+EAVT W 
Sbjct: 1091 EAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWT 1150

Query: 103  RPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLV 162
            RPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACE SFQELKQKLV
Sbjct: 1151 RPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLV 1210

Query: 163  TAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKNHEQNYPTHDLELAAV 222
            TAPVLTVPDGSG+FVIYSDASKKGLGCVLMQQGKVVAYASRQLK HEQNYPTHDLELAAV
Sbjct: 1211 TAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAV 1270

Query: 223  VFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKAN 282
            VFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKAN
Sbjct: 1271 VFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKAN 1330

Query: 283  VVADALSRKVAHSAALVTKQTPLLRDLERAEIAVSVGEVAAQLAQLTVQPTLRQKIIAAQ 342
            VVADALSRKVAHSAAL+TKQTPLLRD ERAEIAVSVGEV AQLAQLTVQPTLRQKIIAAQ
Sbjct: 1331 VVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQ 1390

Query: 343  LSDPYLAEKRRMVETEQGEEFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHP 402
            L DPYLAEKRR+VETEQGE FSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHP
Sbjct: 1391 LDDPYLAEKRRVVETEQGEGFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHP 1450

Query: 403  GSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVS 462
            GSTKMYQDLRSVYWWRGMKRDVA+FVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVS
Sbjct: 1451 GSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVS 1510

Query: 463  MDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSI 522
            MDFITGLPKTLKGYTVIWVVVDRLTK+AHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSI
Sbjct: 1511 MDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSI 1570

Query: 523  VSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSW 582
            VSDRDARFTSKFW+GLQ+ALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSW
Sbjct: 1571 VSDRDARFTSKFWKGLQIALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSW 1630

Query: 583  DSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGP 632
            DSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGP
Sbjct: 1631 DSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGP 1679

[Close]

BLAST of Cmc10g0279341 vs. ExPASy TrEMBL
Match: A0A5A7SIJ5 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold34G003210 PE=4 SV=1)

HSP 1 Score: 1171.8 bits (3030), Expect = 0.0e+00
Identity = 571/589 (96.94%), Postives = 581/589 (98.64%), Query Frame = 0


Query: 43   EAEHEEHLHQVLETLRAHKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKVEAVTIWP 102
            EAEHEEHLHQVLETLRA+KLYAKFSKCEFWL+KVTFLGHVVSSEGVSVDPAK+EAVT W 
Sbjct: 754  EAEHEEHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWT 813

Query: 103  RPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLV 162
            RPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACE SFQELKQKLV
Sbjct: 814  RPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLV 873

Query: 163  TAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKNHEQNYPTHDLELAAV 222
            TAPVLTVPDGSG+FVIYSDASKKGLGCVLMQQGKVVAYASRQLK HEQNYPTHDLELAAV
Sbjct: 874  TAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAV 933

Query: 223  VFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKAN 282
            VFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKAN
Sbjct: 934  VFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKAN 993

Query: 283  VVADALSRKVAHSAALVTKQTPLLRDLERAEIAVSVGEVAAQLAQLTVQPTLRQKIIAAQ 342
            VVADALSRKVAHSAAL+TKQTPLLRD ERAEIAVSVGEV AQLAQLTVQPTLRQKIIAAQ
Sbjct: 994  VVADALSRKVAHSAALITKQTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQ 1053

Query: 343  LSDPYLAEKRRMVETEQGEEFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHP 402
            L DPYLAEKRR+VETEQGE FSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHP
Sbjct: 1054 LDDPYLAEKRRVVETEQGEGFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHP 1113

Query: 403  GSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVS 462
            GSTKMYQDLRSVYWWRGMKRDVA+FVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVS
Sbjct: 1114 GSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVS 1173

Query: 463  MDFITGLPKTLKGYTVIWVVVDRLTKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSI 522
            MDFITGLPKTLKGYTVIWVVVDRLTK+AHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSI
Sbjct: 1174 MDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSI 1233

Query: 523  VSDRDARFTSKFWQGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSW 582
            VSDRDARFTSKFW+GLQ+ALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSW
Sbjct: 1234 VSDRDARFTSKFWKGLQIALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSW 1293

Query: 583  DSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGP 632
            DSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGP
Sbjct: 1294 DSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGP 1342

[Close]

BLAST of Cmc10g0279341 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 119.8 bits (299), Expect = 8.0e-27
Identity = 58/131 (44.27%), Postives = 81/131 (61.83%), Query Frame = 0


Query: 49  HLHQVLETLRAHKLYAKFSKCEFWLKKVTFLG--HVVSSEGVSVDPAKVEAVTIWPRPST 108
           HL  VL+    H+ YA   KC F   ++ +LG  H++S EGVS DPAK+EA+  WP P  
Sbjct: 3   HLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEPKN 62

Query: 109 VSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPV 168
            +E+R FLGL GYYRRFV+++ +I  PLT+L +K +   W+     +F+ LK  + T PV
Sbjct: 63  TTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKKNS-LKWTEMAALAFKALKGAVTTLPV 122

Query: 169 LTVPDGSGSFV 178
           L +PD    FV
Sbjct: 123 LALPDLKLPFV 132

The following BLAST results are available for this feature:

BLAST of Cmc10g0279341 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0025917.1	0.0e+00	99.32	pol protein [Cucumis melo var. makuwa] >KAA0042949.1 pol protein [Cucumis melo v...	[more]
KAA0025917.1	2.4e-09	78.95	pol protein [Cucumis melo var. makuwa] >KAA0042949.1 pol protein [Cucumis melo v...	[more]
KAA0050760.1	3.5e-08	86.96	pol protein [Cucumis melo var. makuwa]	[more]
TYK20443.1	0.0e+00	96.94	pol protein [Cucumis melo var. makuwa]	[more]
KAA0025998.1	0.0e+00	96.94	pol protein [Cucumis melo var. makuwa]	[more]

Pages

BLAST of Cmc10g0279341 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9UR07	1.4e-84	31.16	Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT41	1.4e-84	31.16	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	1.4e-84	31.16	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT35	1.4e-84	31.16	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT36	1.4e-84	31.16	Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Cmc10g0279341 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TP01	0.0e+00	99.32	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold14...	[more]
A0A5A7TP01	1.2e-09	78.95	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold14...	[more]
A0A5A7U6G5	1.7e-08	86.96	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold40...	[more]
A0A5D3BTN0	0.0e+00	96.94	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold45...	[more]
A0A5A7SIJ5	0.0e+00	96.94	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold34...	[more]

Pages

BLAST of Cmc10g0279341 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00860.1	8.0e-27	44.27	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 179..302 e-value: 1.9E-5 score: 26.5
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 448..627 e-value: 2.9E-45 score: 156.0
None	No IPR available	GENE3D	1.10.340.70		coord: 348..438 e-value: 6.9E-19 score: 69.9
None	No IPR available	PANTHER	PTHR24559:SF355	PROTEIN, PUTATIVE-RELATED	coord: 82..291
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 82..291
None	No IPR available	CDD	cd09274	RNase_HI_RT_Ty3	coord: 177..292 e-value: 4.68275E-60 score: 194.248
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 35..90 e-value: 8.7E-14 score: 53.9
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 93..178 e-value: 1.4E-31 score: 110.3
IPR041373	Reverse transcriptase, RNase H-like domain	PFAM	PF17917	RT_RNaseH	coord: 174..270 e-value: 1.3E-34 score: 118.7
IPR041588	Integrase zinc-binding domain	PFAM	PF17921	Integrase_H2C2	coord: 383..439 e-value: 9.3E-18 score: 64.1
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 450..613 score: 19.352245
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 43..276
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 451..610

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc10g0279341.1	Cmc10g0279341.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding