Cmc10g0278061 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc10g0278061
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Ty3-gypsy retrotransposon protein
Location	CMiso1.1chr10: 14010887 .. 14011273 (-)
RNA-Seq Expression	Cmc10g0278061
Synteny	Cmc10g0278061

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATACTAAAGAGGTTGACGTGTCCTTGTCTTCAGAACCAGTGGTGAGGGACTATCCGCATGTTTTTCCTGAAGAACTTCCAGGATTACCTCCTCACAGAGAGATTGAATTTGCCATTGAGTTGGAACCTGGTACGGTTCCTATATCCAGAGCTCCATATAGAATGGCCCCAACAGAGTTGAAAGAGTTGAAAGTGCAGTTGCAGGAGTTGCTTGACAAAGGCTTCATTCGTCCGAGTGTTTCACCTTGGGGTGCACTAGTTTTATTTGTTAAAAAGAAGGATGGATCGATGTGCCTATGTATTGACTACAGAGAGTTGAATAAGGTAATTGTTAAGAACAAATATCCCTTGCCCAGGATCGACGATATGTTTGACAGGTTATAG

mRNA sequence

ATGGATACTAAAGAGGTTGACGTGTCCTTGTCTTCAGAACCAGTGGTGAGGGACTATCCGCATGTTTTTCCTGAAGAACTTCCAGGATTACCTCCTCACAGAGAGATTGAATTTGCCATTGAGTTGGAACCTGGTACGGTTCCTATATCCAGAGCTCCATATAGAATGGCCCCAACAGAGTTGAAAGAGTTGAAAGTGCAGTTGCAGGAGTTGCTTGACAAAGGCTTCATTCGTCCGAGTGTTTCACCTTGGGGTGCACTAGTTTTATTTGTTAAAAAGAAGGATGGATCGATGTGCCTATGTATTGACTACAGAGAGTTGAATAAGGTAATTGTTAAGAACAAATATCCCTTGCCCAGGATCGACGATATGTTTGACAGGTTATAG

Coding sequence (CDS)

ATGGATACTAAAGAGGTTGACGTGTCCTTGTCTTCAGAACCAGTGGTGAGGGACTATCCGCATGTTTTTCCTGAAGAACTTCCAGGATTACCTCCTCACAGAGAGATTGAATTTGCCATTGAGTTGGAACCTGGTACGGTTCCTATATCCAGAGCTCCATATAGAATGGCCCCAACAGAGTTGAAAGAGTTGAAAGTGCAGTTGCAGGAGTTGCTTGACAAAGGCTTCATTCGTCCGAGTGTTTCACCTTGGGGTGCACTAGTTTTATTTGTTAAAAAGAAGGATGGATCGATGTGCCTATGTATTGACTACAGAGAGTTGAATAAGGTAATTGTTAAGAACAAATATCCCTTGCCCAGGATCGACGATATGTTTGACAGGTTATAG

Protein sequence

MDTKEVDVSLSSEPVVRDYPHVFPEELPGLPPHREIEFAIELEPGTVPISRAPYRMAPTELKELKVQLQELLDKGFIRPSVSPWGALVLFVKKKDGSMCLCIDYRELNKVIVKNKYPLPRIDDMFDRL

Homology

[Close]

BLAST of Cmc10g0278061 vs. NCBI nr
Match: KAA0067059.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK26296.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 259.2 bits (661), Expect = 1.8e-65
Identity = 126/127 (99.21%), Postives = 126/127 (99.21%), Query Frame = 0


Query: 1   MDTKEVDVSLSSEPVVRDYPHVFPEELPGLPPHREIEFAIELEPGTVPISRAPYRMAPTE 60
           MDTKEVDVSLSSEPVVRDYPHVFPEELPGLPPHREIEFAIELEPGTVPISRA YRMAPTE
Sbjct: 156 MDTKEVDVSLSSEPVVRDYPHVFPEELPGLPPHREIEFAIELEPGTVPISRALYRMAPTE 215

Query: 61  LKELKVQLQELLDKGFIRPSVSPWGALVLFVKKKDGSMCLCIDYRELNKVIVKNKYPLPR 120
           LKELKVQLQELLDKGFIRPSVSPWGALVLFVKKKDGSMCLCIDYRELNKVIVKNKYPLPR
Sbjct: 216 LKELKVQLQELLDKGFIRPSVSPWGALVLFVKKKDGSMCLCIDYRELNKVIVKNKYPLPR 275

Query: 121 IDDMFDR 128
           IDDMFDR
Sbjct: 276 IDDMFDR 282

[Close]

BLAST of Cmc10g0278061 vs. NCBI nr
Match: KAA0038888.1 (gag protease polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 245.7 bits (626), Expect = 2.1e-61
Identity = 117/128 (91.41%), Postives = 123/128 (96.09%), Query Frame = 0


Query: 1   MDTKEVDVSLSSEPVVRDYPHVFPEELPGLPPHREIEFAIELEPGTVPISRAPYRMAPTE 60
           +DT+EVDVSLSSEPVVRDYP VFPEELPGLPPHRE+EFAIELEPGTVPISRAPYRMAP E
Sbjct: 302 VDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAE 361

Query: 61  LKELKVQLQELLDKGFIRPSVSPWGALVLFVKKKDGSMCLCIDYRELNKVIVKNKYPLPR 120
           LKELKVQLQELLDKGFIRPSVSPWGA VLFVKK DGSMCLCIDYRELNKV VKN+YPLPR
Sbjct: 362 LKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKNDGSMCLCIDYRELNKVTVKNRYPLPR 421

Query: 121 IDDMFDRL 129
           IDD+FD+L
Sbjct: 422 IDDLFDQL 429

[Close]

BLAST of Cmc10g0278061 vs. NCBI nr
Match: KAA0035480.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 244.2 bits (622), Expect = 6.1e-61
Identity = 118/128 (92.19%), Postives = 123/128 (96.09%), Query Frame = 0


Query: 1   MDTKEVDVSLSSEPVVRDYPHVFPEELPGLPPHREIEFAIELEPGTVPISRAPYRMAPTE 60
           +DTKEVDVSLSSEPVVRDYP VFPEELPGLPPHRE+EFAIELEPGTVPISRAPYRMAP E
Sbjct: 548 VDTKEVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAE 607

Query: 61  LKELKVQLQELLDKGFIRPSVSPWGALVLFVKKKDGSMCLCIDYRELNKVIVKNKYPLPR 120
           LKELKVQLQELLDKGFIRPSVSPWGA VLFVKKKDGSM LCIDYRELNKV VKN+YPLPR
Sbjct: 608 LKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPR 667

Query: 121 IDDMFDRL 129
           IDD+FD+L
Sbjct: 668 IDDLFDQL 675

[Close]

BLAST of Cmc10g0278061 vs. NCBI nr
Match: KAA0036666.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 244.2 bits (622), Expect = 6.1e-61
Identity = 118/128 (92.19%), Postives = 123/128 (96.09%), Query Frame = 0


Query: 1   MDTKEVDVSLSSEPVVRDYPHVFPEELPGLPPHREIEFAIELEPGTVPISRAPYRMAPTE 60
           +DT+EVDVSLSSEPVVRDYP VFPEELPGLPPHRE+EFAIELEPGTVPISRAPYRMAP E
Sbjct: 733 VDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAE 792

Query: 61  LKELKVQLQELLDKGFIRPSVSPWGALVLFVKKKDGSMCLCIDYRELNKVIVKNKYPLPR 120
           LKELKVQLQELLDKGFIRPSVSPWGA VLFVKKKDGSM LCIDYRELNKV VKNKYPLPR
Sbjct: 793 LKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNKYPLPR 852

Query: 121 IDDMFDRL 129
           IDD+FD+L
Sbjct: 853 IDDLFDQL 860

[Close]

BLAST of Cmc10g0278061 vs. NCBI nr
Match: KAA0055417.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 243.8 bits (621), Expect = 8.0e-61
Identity = 116/128 (90.62%), Postives = 122/128 (95.31%), Query Frame = 0


Query: 1   MDTKEVDVSLSSEPVVRDYPHVFPEELPGLPPHREIEFAIELEPGTVPISRAPYRMAPTE 60
           +DT+EVDVSLSSEPVVRDYP VFPEELPGLPPHRE+EFAIELEP TVPISRAPYRMAP E
Sbjct: 383 VDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPSTVPISRAPYRMAPAE 442

Query: 61  LKELKVQLQELLDKGFIRPSVSPWGALVLFVKKKDGSMCLCIDYRELNKVIVKNKYPLPR 120
           LKELKVQLQELLDKGFIRPSVSPWG  VLFVKKKDGSMCLCIDYRELNKV VKN+YPLPR
Sbjct: 443 LKELKVQLQELLDKGFIRPSVSPWGVPVLFVKKKDGSMCLCIDYRELNKVTVKNRYPLPR 502

Query: 121 IDDMFDRL 129
           IDD+FD+L
Sbjct: 503 IDDLFDQL 510

[Close]

BLAST of Cmc10g0278061 vs. ExPASy Swiss-Prot
Match: Q99315 (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3)

HSP 1 Score: 81.3 bits (199), Expect = 9.0e-15
Identity = 42/113 (37.17%), Postives = 64/113 (56.64%), Query Frame = 0


Query: 19  YPHVFPEELPGLPP---HREIEFAIELEPGTVPISRAPYRMAPTELKELKVQLQELLDKG 78
           Y  +   +LP  P    +  ++  IE++PG       PY +     +E+   +Q+LLD  
Sbjct: 564 YREIIRNDLPPRPADINNIPVKHDIEIKPGARLPRLQPYHVTEKNEQEINKIVQKLLDNK 623

Query: 79  FIRPSVSPWGALVLFVKKKDGSMCLCIDYRELNKVIVKNKYPLPRIDDMFDRL 129
           FI PS SP  + V+ V KKDG+  LC+DYR LNK  + + +PLPRID++  R+
Sbjct: 624 FIVPSKSPCSSPVVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRIDNLLSRI 676

[Close]

BLAST of Cmc10g0278061 vs. ExPASy Swiss-Prot
Match: Q7LHG5 (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2)

HSP 1 Score: 81.3 bits (199), Expect = 9.0e-15
Identity = 42/113 (37.17%), Postives = 64/113 (56.64%), Query Frame = 0


Query: 19  YPHVFPEELPGLPP---HREIEFAIELEPGTVPISRAPYRMAPTELKELKVQLQELLDKG 78
           Y  +   +LP  P    +  ++  IE++PG       PY +     +E+   +Q+LLD  
Sbjct: 590 YREIIRNDLPPRPADINNIPVKHDIEIKPGARLPRLQPYHVTEKNEQEINKIVQKLLDNK 649

Query: 79  FIRPSVSPWGALVLFVKKKDGSMCLCIDYRELNKVIVKNKYPLPRIDDMFDRL 129
           FI PS SP  + V+ V KKDG+  LC+DYR LNK  + + +PLPRID++  R+
Sbjct: 650 FIVPSKSPCSSPVVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRIDNLLSRI 702

[Close]

BLAST of Cmc10g0278061 vs. ExPASy Swiss-Prot
Match: P10394 (Retrovirus-related Pol polyprotein from transposon 412 OS=Drosophila melanogaster OX=7227 GN=POL PE=4 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 2.4e-12
Identity = 42/132 (31.82%), Postives = 71/132 (53.79%), Query Frame = 0


Query: 17  RDYPHVFPEELPGLPPHREIEFAIELEPGTV--------------PISRAPYRMAPTELK 76
           +++P +F  +L  +       FA+E EP TV              P+    YR   ++++
Sbjct: 269 KNFPELFKSQLENICSEYIDIFALESEPITVNNLYKQQLRLKDDEPVYTKNYRSPHSQVE 328

Query: 77  ELKVQLQELLDKGFIRPSVSPWGALVLFVKKKDG------SMCLCIDYRELNKVIVKNKY 129
           E++ Q+Q+L+    + PSVS + + +L V KK           L IDYR++NK ++ +K+
Sbjct: 329 EIQAQVQKLIKDKIVEPSVSQYNSPLLLVPKKSSPNSDKKKWRLVIDYRQINKKLLADKF 388

[Close]

BLAST of Cmc10g0278061 vs. ExPASy Swiss-Prot
Match: Q9UR07 (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 7.4e-09
Identity = 32/104 (30.77%), Postives = 58/104 (55.77%), Query Frame = 0


Query: 25  EELPGLPPHREIEFAIELEPGTVPISRAPYRMAPTELKELKVQLQELLDKGFIRPSVSPW 84
           E+LP   P + +EF +EL      +    Y + P +++ +  ++ + L  G IR S +  
Sbjct: 391 EKLP--KPIKGLEFEVELTQENYRLPIRNYPLPPGKMQAMNDEINQGLKSGIIRESKAIN 450

Query: 85  GALVLFVKKKDGSMCLCIDYRELNKVIVKNKYPLPRIDDMFDRL 129
              V+FV KK+G++ + +DY+ LNK +  N YPLP I+ +  ++
Sbjct: 451 ACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKI 492

[Close]

BLAST of Cmc10g0278061 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 7.4e-09
Identity = 32/104 (30.77%), Postives = 58/104 (55.77%), Query Frame = 0


Query: 25  EELPGLPPHREIEFAIELEPGTVPISRAPYRMAPTELKELKVQLQELLDKGFIRPSVSPW 84
           E+LP   P + +EF +EL      +    Y + P +++ +  ++ + L  G IR S +  
Sbjct: 391 EKLP--KPIKGLEFEVELTQENYRLPIRNYPLPPGKMQAMNDEINQGLKSGIIRESKAIN 450

Query: 85  GALVLFVKKKDGSMCLCIDYRELNKVIVKNKYPLPRIDDMFDRL 129
              V+FV KK+G++ + +DY+ LNK +  N YPLP I+ +  ++
Sbjct: 451 ACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKI 492

[Close]

BLAST of Cmc10g0278061 vs. ExPASy TrEMBL
Match: A0A5A7VP50 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold14G00720 PE=4 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 8.9e-66
Identity = 126/127 (99.21%), Postives = 126/127 (99.21%), Query Frame = 0


Query: 1   MDTKEVDVSLSSEPVVRDYPHVFPEELPGLPPHREIEFAIELEPGTVPISRAPYRMAPTE 60
           MDTKEVDVSLSSEPVVRDYPHVFPEELPGLPPHREIEFAIELEPGTVPISRA YRMAPTE
Sbjct: 156 MDTKEVDVSLSSEPVVRDYPHVFPEELPGLPPHREIEFAIELEPGTVPISRALYRMAPTE 215

Query: 61  LKELKVQLQELLDKGFIRPSVSPWGALVLFVKKKDGSMCLCIDYRELNKVIVKNKYPLPR 120
           LKELKVQLQELLDKGFIRPSVSPWGALVLFVKKKDGSMCLCIDYRELNKVIVKNKYPLPR
Sbjct: 216 LKELKVQLQELLDKGFIRPSVSPWGALVLFVKKKDGSMCLCIDYRELNKVIVKNKYPLPR 275

Query: 121 IDDMFDR 128
           IDDMFDR
Sbjct: 276 IDDMFDR 282

[Close]

BLAST of Cmc10g0278061 vs. ExPASy TrEMBL
Match: A0A5A7T7P2 (Gag protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1170G00510 PE=4 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 1.0e-61
Identity = 117/128 (91.41%), Postives = 123/128 (96.09%), Query Frame = 0


Query: 1   MDTKEVDVSLSSEPVVRDYPHVFPEELPGLPPHREIEFAIELEPGTVPISRAPYRMAPTE 60
           +DT+EVDVSLSSEPVVRDYP VFPEELPGLPPHRE+EFAIELEPGTVPISRAPYRMAP E
Sbjct: 302 VDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAE 361

Query: 61  LKELKVQLQELLDKGFIRPSVSPWGALVLFVKKKDGSMCLCIDYRELNKVIVKNKYPLPR 120
           LKELKVQLQELLDKGFIRPSVSPWGA VLFVKK DGSMCLCIDYRELNKV VKN+YPLPR
Sbjct: 362 LKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKNDGSMCLCIDYRELNKVTVKNRYPLPR 421

Query: 121 IDDMFDRL 129
           IDD+FD+L
Sbjct: 422 IDDLFDQL 429

[Close]

BLAST of Cmc10g0278061 vs. ExPASy TrEMBL
Match: A0A5A7T3J6 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold510G00020 PE=4 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 3.0e-61
Identity = 118/128 (92.19%), Postives = 123/128 (96.09%), Query Frame = 0


Query: 1   MDTKEVDVSLSSEPVVRDYPHVFPEELPGLPPHREIEFAIELEPGTVPISRAPYRMAPTE 60
           +DT+EVDVSLSSEPVVRDYP VFPEELPGLPPHRE+EFAIELEPGTVPISRAPYRMAP E
Sbjct: 733 VDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAE 792

Query: 61  LKELKVQLQELLDKGFIRPSVSPWGALVLFVKKKDGSMCLCIDYRELNKVIVKNKYPLPR 120
           LKELKVQLQELLDKGFIRPSVSPWGA VLFVKKKDGSM LCIDYRELNKV VKNKYPLPR
Sbjct: 793 LKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNKYPLPR 852

Query: 121 IDDMFDRL 129
           IDD+FD+L
Sbjct: 853 IDDLFDQL 860

[Close]

BLAST of Cmc10g0278061 vs. ExPASy TrEMBL
Match: A0A5A7SWR6 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold285G001300 PE=4 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 3.0e-61
Identity = 118/128 (92.19%), Postives = 123/128 (96.09%), Query Frame = 0


Query: 1   MDTKEVDVSLSSEPVVRDYPHVFPEELPGLPPHREIEFAIELEPGTVPISRAPYRMAPTE 60
           +DTKEVDVSLSSEPVVRDYP VFPEELPGLPPHRE+EFAIELEPGTVPISRAPYRMAP E
Sbjct: 548 VDTKEVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAE 607

Query: 61  LKELKVQLQELLDKGFIRPSVSPWGALVLFVKKKDGSMCLCIDYRELNKVIVKNKYPLPR 120
           LKELKVQLQELLDKGFIRPSVSPWGA VLFVKKKDGSM LCIDYRELNKV VKN+YPLPR
Sbjct: 608 LKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPR 667

Query: 121 IDDMFDRL 129
           IDD+FD+L
Sbjct: 668 IDDLFDQL 675

[Close]

BLAST of Cmc10g0278061 vs. ExPASy TrEMBL
Match: A0A5A7ULG3 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold80G002670 PE=4 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 3.9e-61
Identity = 116/128 (90.62%), Postives = 122/128 (95.31%), Query Frame = 0


Query: 1   MDTKEVDVSLSSEPVVRDYPHVFPEELPGLPPHREIEFAIELEPGTVPISRAPYRMAPTE 60
           +DT+EVDVSLSSEPVVRDYP VFPEELPGLPPHRE+EFAIELEP TVPISRAPYRMAP E
Sbjct: 383 VDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPSTVPISRAPYRMAPAE 442

Query: 61  LKELKVQLQELLDKGFIRPSVSPWGALVLFVKKKDGSMCLCIDYRELNKVIVKNKYPLPR 120
           LKELKVQLQELLDKGFIRPSVSPWG  VLFVKKKDGSMCLCIDYRELNKV VKN+YPLPR
Sbjct: 443 LKELKVQLQELLDKGFIRPSVSPWGVPVLFVKKKDGSMCLCIDYRELNKVTVKNRYPLPR 502

Query: 121 IDDMFDRL 129
           IDD+FD+L
Sbjct: 503 IDDLFDQL 510

The following BLAST results are available for this feature:

BLAST of Cmc10g0278061 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0067059.1	1.8e-65	99.21	ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK26296.1 ty3-gyp...	[more]
KAA0038888.1	2.1e-61	91.41	gag protease polyprotein [Cucumis melo var. makuwa]	[more]
KAA0035480.1	6.1e-61	92.19	pol protein [Cucumis melo var. makuwa]	[more]
KAA0036666.1	6.1e-61	92.19	pol protein [Cucumis melo var. makuwa]	[more]
KAA0055417.1	8.0e-61	90.63	reverse transcriptase [Cucumis melo var. makuwa]	[more]

BLAST of Cmc10g0278061 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q99315	9.0e-15	37.17	Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
Q7LHG5	9.0e-15	37.17	Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
P10394	2.4e-12	31.82	Retrovirus-related Pol polyprotein from transposon 412 OS=Drosophila melanogaste...	[more]
Q9UR07	7.4e-09	30.77	Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT41	7.4e-09	30.77	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]

BLAST of Cmc10g0278061 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VP50	8.9e-66	99.21	Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5A7T7P2	1.0e-61	91.41	Gag protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol...	[more]
A0A5A7T3J6	3.0e-61	92.19	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold51...	[more]
A0A5A7SWR6	3.0e-61	92.19	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold28...	[more]
A0A5A7ULG3	3.9e-61	90.63	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold80...	[more]

BLAST of Cmc10g0278061 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 28..126 e-value: 6.6E-34 score: 118.6
None	No IPR available	PANTHER	PTHR24559:SF382	SUBFAMILY NOT NAMED	coord: 23..125
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 23..125
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 15..128

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc10g0278061.1	Cmc10g0278061.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
cellular_component	GO:0016020	membrane
cellular_component	GO:0043227	membrane-bounded organelle
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0008270	zinc ion binding