Cmc10g0277861 (gene) Melon (Charmono) v1.1

Overview
NameCmc10g0277861
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionRhodanese domain-containing protein
LocationCMiso1.1chr10: 13751485 .. 13754321 (+)
RNA-Seq ExpressionCmc10g0277861
SyntenyCmc10g0277861
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTCCTTTAGTAGTATTTTGGCCCCTATTTATTCACCAATGTAATAGGTTATTATCTGCATCTTGATTTATTCAATATATTATATAAAATTGAACATTTTTATTTATATTGTTTAAGTTATCAATCGTTTACGTGGGATTCGGGTTTCTGCATATGTTTTGATTATTGAATTGTTATTGAACTTAAAAATGTAATATCACGATAGGAACTGTATTCCGTTGGTTGCATATATGTTCTGATTGTCTGGCCGATCATTCAGAGACTTCATACTTCTTCTCATTGAAGAGAATAAGGTGACCTTGCTAAATAATTAAATGATAACGTAGGTGGTTACTGATGTGCAAAATCACTACGAAACAAGGATTGAAAAGTTCAAAACAGCAGTTGATCCTTCTACTACAGCATTTCGAGATTTTCCTGCTTGGGTGGAAGATAAATTCCAACTTCCTAAATTAGATTGCAAACATTCAAATCAAGGAGATGAAGAAACAGTAAACCCTGAAGAGAGCTCGCCCCCGCGAGTTGCCATGTATTGCACTGGAGGAATTCGCTGTGAGAAAGCCTCGAGTTATCTCCTAAGAAAAGGGTTTAAAGAGGTGAACTTGTTGATCTCTATATAATACGATTTGCTTTTGATGAACTTTTTGAATAAACTTTGGACATGACATATGTTCGTGAGTTCGTCAAGCTCAAACGCAATAGGTCTTATAGGAAAAATGCTAATAATTATTTTCTTTTCAAAATAATAAAATTCTTGATGAAGGGCTTCATAGAAGGTGCACGCCTTGCCTTCTTCTTTTAGATAATTGCTGCCTTGAAAAGTCACAGGCTTTTCAGAAATAAGTGTTCCTAGATTGATGATCGATGCATGCACTTAAATCTTGGAAGTGTTTAATCAAATCATTTTTGCATGACACGCAATTGCTTTCTCATGTATTTTTCTATCTGAGACACTAAAAATCTGATGCATCATCCTATCTGAATGATTTTTAGGTTTATCATTTGGAAGGTGGAATTCTGAAATATTTGGAGGAAGTTCCAAGGTCAGAGAGTCTAAGGGAAGGCGAATGCTTTGTATTTGACAAGCGTGACTCAGTTGAGCATGGTCTGGAGCAGGGCACATTCAAACTCTGTTATGGGTACAAGCAACCGGTGAGTGATGGTGACATGGAATCTCCTCAGTGGTAGTATGGAGTTTCTTGTCCTTACTGTTTCTCGACGAAATCTGATGAAGAGAAGGAGAGAGCAAGAGCTCGGCAAAGGCAATTTGAGACTTGGGGCATCATTGGTGGTCCGGACAAAGGCCGGCGTCCAACACAAAATGATAACAACGTTAATCATCCAAATTCAGTTTGATGCTTTGCTACTTAAGGTTCTTTTGTCATTTTTGTATTAGGGAATTATGCAAAGGACAAACCAAAACATCCATCTCCGCCTTGATTATTGTCTTGTGTACAATATATCATTTTTGTTAATTATGACAAAATTGAGAAATTTTGAGCATGGTCCTCTATTAAATGAACTTCGATACATTCAGATTCGAAGACTTTCTCCCATTCTTTTTTGTCTCTCTGTTTTAATGACACATGAGCAACAAAGAAAGCCGTAAAGTGATGAGAACAAACCAAGGATTTATTAAACTAGATTCGATACAAGTACGGCTCCTTTGGGGCTAAAGAGATAAAAGAAACATAAAACAAATGAAGACAGGTGAAAAGGGTTTGTTGAAGTTCCTCCATCCAAAGCTCAGGAATCTCCTACATCCCATCAACATTGAAGCTGCGGCGTTATGGAGTGTTGCTGGGACAGCCACTGCTTTTGGCTTGTACAGGTATTCGTCTTTAGCTTCACCGACTCTTTTCTTTTCATCTACCAGCATGTTTCTGTTTGTTGTGAAAAATCGTAACTATTCTTATCGTCTTGAAACTGAAAAAACATGGCAGCCATTTGACTGGTTGAAGAAGAAGGTTTGGAAGGTAGAGGAGAAAGAAGAAAACGAGGTGCAAACTAATGAATAAGATAGCTATTGTAAAAGTATATCCACTGTCCGAAGAACTTTAATACCAAATAACTTGGTAACTCTGAATAAAGATTTGATATGATATGAACATGTTTATCCTTCTTTCTATTTCTTCAAATTCATCATCGGGATTCAAGAATGGTGAGGCGGAGGAGGAGGAGGAGGAGGAGCAACAGCATCAGAATGTTGCTTGAGAGCTTGGAAAACTTCAGAACTGGAGCTGAAAATCTTAGCTCTTCTATTATAATCTGTTGGCTCTCTCCCTTCATCTTCTCCCATAATGGCTTCTTTTTCCATACATTCAAGTAGCTCCACTATTCCCTTTCCTCCGCTGCCGCACTTCTCCTCCAACCTGCCTAGCTTCAGCCACTCTTCTATGTCCACCTCCGCCACAGAGGTTCCCCATCCACCCTGACTAACACATCTTGGCTCTGCCACCGCCTCCGCAGCTCGATGGCCGAGCCATGGTGAGGAAAGGGATGGAGTTGACCTGAGCTTAGGGAAGAAGGCGGTGGAGGGGCGGAGGAGGGGTGGTGGAATTATGAGAGATGTTGAGAGTTGCATATTGTGTTTGTTTGGTGGTGAGGTGTTTGTTCTTTTTGTTTTTTCGCCTTTCTCTTTGAGAAATGTAGGGAGAGATTTTGGGAGAGGGAGTTTGGAGTTTGTATTATTATAGGAATTTTTCAAGAGAAAAACAAGCACCGCCATTAACCACCGTTTGGACGTTGAACGTGGCAGTCCATGCAATGGCACGAGCTCACGTGCTCTCTTATTCATCATTCTAATTTATATATAATTAGGATAATGCTCATTG

mRNA sequence

ATGTTTCCTTTAGTAGTGGTTACTGATGTGCAAAATCACTACGAAACAAGGATTGAAAAGTTCAAAACAGCAGTTGATCCTTCTACTACAGCATTTCGAGATTTTCCTGCTTGGGTGGAAGATAAATTCCAACTTCCTAAATTAGATTGCAAACATTCAAATCAAGGAGATGAAGAAACAGTAAACCCTGAAGAGAGCTCGCCCCCGCGAGTTGCCATGTATTGCACTGGAGGAATTCGCTGTGAGAAAGCCTCGAGTTATCTCCTAAGAAAAGGGTTTAAAGAGGTTTATCATTTGGAAGGTGGAATTCTGAAATATTTGGAGGAAGTTCCAAGGTCAGAGAGTCTAAGGGAAGGCGAATGCTTTGTATTTGACAAGCGTGACTCAGTTGAGCATGGTCTGGAGCAGGGCACATTCAAACTCTGTTATGGGTACAAGCAACCGGTGAGTGATGGTGACATGGAATCTCCTCAGTGGTAGTATGGAGTTTCTTGTCCTTACTGTTTCTCGACGAAATCTGATGAAGAGAAGGAGAGAGCAAGAGCTCGGCAAAGGCAATTTGAGACTTGGGGCATCATTGGTGGTCCGGACAAAGGCCGGCGTCCAACACAAAATGATAACAACGTTAATCATCCAAATTCAGTTTGATGCTTTGCTACTTAAGGTTCTTTTGTCATTTTTGTATTAGGGAATTATGCAAAGGACAAACCAAAACATCCATCTCCGCCTTGATTATTGTCTTGTGTACAATATATCATTTTTGTTAATTATGACAAAATTGAGAAATTTTGAGCATGGTCCTCTATTAAATGAACTTCGATACATTCAGATTCGAAGACTTTCTCCCATTCTTTTTTGTCTCTCTGTTTTAATGACACATGAGCAACAAAGAAAGCCGTAAAGTGATGAGAACAAACCAAGGATTTATTAAACTAGATTCGATACAAGTACGGCTCCTTTGGGGCTAAAGAGATAAAAGAAACATAAAACAAATGAAGACAGGTGAAAAGGGTTTGTTGAAGTTCCTCCATCCAAAGCTCAGGAATCTCCTACATCCCATCAACATTGAAGCTGCGGCGTTATGGAGTGTTGCTGGGACAGCCACTGCTTTTGGCTTGTACAGCCATTTGACTGGTTGAAGAAGAAGGTTTGGAAGGTAGAGGAGAAAGAAGAAAACGAGGTGCAAACTAATGAATAAGATAGCTATTGTAAAAGTATATCCACTGTCCGAAGAACTTTAATACCAAATAACTTGGTAACTCTGAATAAAGATTTGATATGATATGAACATGTTTATCCTTCTTTCTATTTCTTCAAATTCATCATCGGGATTCAAGAATGGTGAGGCGGAGGAGGAGGAGGAGGAGGAGCAACAGCATCAGAATGTTGCTTGAGAGCTTGGAAAACTTCAGAACTGGAGCTGAAAATCTTAGCTCTTCTATTATAATCTGTTGGCTCTCTCCCTTCATCTTCTCCCATAATGGCTTCTTTTTCCATACATTCAAGTAGCTCCACTATTCCCTTTCCTCCGCTGCCGCACTTCTCCTCCAACCTGCCTAGCTTCAGCCACTCTTCTATGTCCACCTCCGCCACAGAGGTTCCCCATCCACCCTGACTAACACATCTTGGCTCTGCCACCGCCTCCGCAGCTCGATGGCCGAGCCATGGTGAGGAAAGGGATGGAGTTGACCTGAGCTTAGGGAAGAAGGCGGTGGAGGGGCGGAGGAGGGGTGGTGGAATTATGAGAGATGTTGAGAGTTGCATATTGTGTTTGTTTGGTGGTGAGGTGTTTGTTCTTTTTGTTTTTTCGCCTTTCTCTTTGAGAAATGTAGGGAGAGATTTTGGGAGAGGGAGTTTGGAGTTTGTATTATTATAGGAATTTTTCAAGAGAAAAACAAGCACCGCCATTAACCACCGTTTGGACGTTGAACGTGGCAGTCCATGCAATGGCACGAGCTCACGTGCTCTCTTATTCATCATTCTAATTTATATATAATTAGGATAATGCTCATTG

Coding sequence (CDS)

ATGTTTCCTTTAGTAGTGGTTACTGATGTGCAAAATCACTACGAAACAAGGATTGAAAAGTTCAAAACAGCAGTTGATCCTTCTACTACAGCATTTCGAGATTTTCCTGCTTGGGTGGAAGATAAATTCCAACTTCCTAAATTAGATTGCAAACATTCAAATCAAGGAGATGAAGAAACAGTAAACCCTGAAGAGAGCTCGCCCCCGCGAGTTGCCATGTATTGCACTGGAGGAATTCGCTGTGAGAAAGCCTCGAGTTATCTCCTAAGAAAAGGGTTTAAAGAGGTTTATCATTTGGAAGGTGGAATTCTGAAATATTTGGAGGAAGTTCCAAGGTCAGAGAGTCTAAGGGAAGGCGAATGCTTTGTATTTGACAAGCGTGACTCAGTTGAGCATGGTCTGGAGCAGGGCACATTCAAACTCTGTTATGGGTACAAGCAACCGGTGAGTGATGGTGACATGGAATCTCCTCAGTGGTAG

Protein sequence

MFPLVVVTDVQNHYETRIEKFKTAVDPSTTAFRDFPAWVEDKFQLPKLDCKHSNQGDEETVNPEESSPPRVAMYCTGGIRCEKASSYLLRKGFKEVYHLEGGILKYLEEVPRSESLREGECFVFDKRDSVEHGLEQGTFKLCYGYKQPVSDGDMESPQW
Homology
BLAST of Cmc10g0277861 vs. NCBI nr
Match: XP_016902023.1 (PREDICTED: LOW QUALITY PROTEIN: rhodanese-like domain-containing protein 7 [Cucumis melo])

HSP 1 Score: 323.9 bits (829), Expect = 7.5e-85
Identity = 153/157 (97.45%), Postives = 153/157 (97.45%), Query Frame = 0

Query: 3   PLVVVTDVQNHYETRIEKFKTAVDPSTTAFRDFPAWVEDKFQLPKLDCKHSNQGDEETVN 62
           P  VVTDVQNHYETRIEKFKTAVDPSTTAFRDFPAWVEDKFQLPKLDCKHSNQGDEETVN
Sbjct: 239 PDTVVTDVQNHYETRIEKFKTAVDPSTTAFRDFPAWVEDKFQLPKLDCKHSNQGDEETVN 298

Query: 63  PEESSPPRVAMYCTGGIRCEKASSYLLRKGFKEVYHLEGGILKYLEEVPRSESLREGECF 122
           PEESSP RVAMYCTGGIRCEKASSYLLRKGFKEVYHLEGGILKYLEEVPRSESLREGECF
Sbjct: 299 PEESSPLRVAMYCTGGIRCEKASSYLLRKGFKEVYHLEGGILKYLEEVPRSESLREGECF 358

Query: 123 VFDKRDSVEHGLEQGTFKLCYGYKQPVSDGDMESPQW 160
           VFDKRDSVEHGLEQGTFKLCYGYKQPVSD DMESPQW
Sbjct: 359 VFDKRDSVEHGLEQGTFKLCYGYKQPVSDADMESPQW 395

BLAST of Cmc10g0277861 vs. NCBI nr
Match: KAA0067022.1 (rhodanese-like domain-containing protein 7 [Cucumis melo var. makuwa] >TYK26258.1 rhodanese-like domain-containing protein 7 [Cucumis melo var. makuwa])

HSP 1 Score: 323.2 bits (827), Expect = 1.3e-84
Identity = 152/154 (98.70%), Postives = 152/154 (98.70%), Query Frame = 0

Query: 6   VVTDVQNHYETRIEKFKTAVDPSTTAFRDFPAWVEDKFQLPKLDCKHSNQGDEETVNPEE 65
           VVTDVQNHYETRIEKFKTAVDPSTTAFRDFPAWVEDKFQLPKLDCKHSNQGDEETVNPEE
Sbjct: 102 VVTDVQNHYETRIEKFKTAVDPSTTAFRDFPAWVEDKFQLPKLDCKHSNQGDEETVNPEE 161

Query: 66  SSPPRVAMYCTGGIRCEKASSYLLRKGFKEVYHLEGGILKYLEEVPRSESLREGECFVFD 125
           SSP RVAMYCTGGIRCEKASSYLLRKGFKEVYHLEGGILKYLEEVPRSESLREGECFVFD
Sbjct: 162 SSPLRVAMYCTGGIRCEKASSYLLRKGFKEVYHLEGGILKYLEEVPRSESLREGECFVFD 221

Query: 126 KRDSVEHGLEQGTFKLCYGYKQPVSDGDMESPQW 160
           KRDSVEHGLEQGTFKLCYGYKQPVSD DMESPQW
Sbjct: 222 KRDSVEHGLEQGTFKLCYGYKQPVSDADMESPQW 255

BLAST of Cmc10g0277861 vs. NCBI nr
Match: KAE8648056.1 (hypothetical protein Csa_005784 [Cucumis sativus])

HSP 1 Score: 298.1 bits (762), Expect = 4.4e-77
Identity = 141/157 (89.81%), Postives = 145/157 (92.36%), Query Frame = 0

Query: 3   PLVVVTDVQNHYETRIEKFKTAVDPSTTAFRDFPAWVEDKFQLPKLDCKHSNQGDEETVN 62
           P  VV DV+NHYETRI KFKTAVDP TTAFRDFPAWVEDK QLPKLDCKHSNQG EETVN
Sbjct: 174 PDTVVIDVRNHYETRIGKFKTAVDPCTTAFRDFPAWVEDKLQLPKLDCKHSNQGGEETVN 233

Query: 63  PEESSPPRVAMYCTGGIRCEKASSYLLRKGFKEVYHLEGGILKYLEEVPRSESLREGECF 122
           P+ESSPPRVAMYCTGGIRCEKASSYLL KGFKEVYHLEGGILKYLEEVP+SESL EGECF
Sbjct: 234 PKESSPPRVAMYCTGGIRCEKASSYLLSKGFKEVYHLEGGILKYLEEVPKSESLWEGECF 293

Query: 123 VFDKRDSVEHGLEQGTFKLCYGYKQPVSDGDMESPQW 160
           VFDKR SVEHGLEQGTFKLCYG KQPVSD DMESP+W
Sbjct: 294 VFDKRVSVEHGLEQGTFKLCYGCKQPVSDADMESPEW 330

BLAST of Cmc10g0277861 vs. NCBI nr
Match: XP_004146431.2 (rhodanese-like domain-containing protein 7 [Cucumis sativus])

HSP 1 Score: 298.1 bits (762), Expect = 4.4e-77
Identity = 141/157 (89.81%), Postives = 145/157 (92.36%), Query Frame = 0

Query: 3   PLVVVTDVQNHYETRIEKFKTAVDPSTTAFRDFPAWVEDKFQLPKLDCKHSNQGDEETVN 62
           P  VV DV+NHYETRI KFKTAVDP TTAFRDFPAWVEDK QLPKLDCKHSNQG EETVN
Sbjct: 245 PDTVVIDVRNHYETRIGKFKTAVDPCTTAFRDFPAWVEDKLQLPKLDCKHSNQGGEETVN 304

Query: 63  PEESSPPRVAMYCTGGIRCEKASSYLLRKGFKEVYHLEGGILKYLEEVPRSESLREGECF 122
           P+ESSPPRVAMYCTGGIRCEKASSYLL KGFKEVYHLEGGILKYLEEVP+SESL EGECF
Sbjct: 305 PKESSPPRVAMYCTGGIRCEKASSYLLSKGFKEVYHLEGGILKYLEEVPKSESLWEGECF 364

Query: 123 VFDKRDSVEHGLEQGTFKLCYGYKQPVSDGDMESPQW 160
           VFDKR SVEHGLEQGTFKLCYG KQPVSD DMESP+W
Sbjct: 365 VFDKRVSVEHGLEQGTFKLCYGCKQPVSDADMESPEW 401

BLAST of Cmc10g0277861 vs. NCBI nr
Match: XP_038892558.1 (rhodanese-like domain-containing protein 7 [Benincasa hispida])

HSP 1 Score: 291.6 bits (745), Expect = 4.2e-75
Identity = 139/158 (87.97%), Postives = 145/158 (91.77%), Query Frame = 0

Query: 3   PLVVVTDVQNHYETRIEKFKTAVDPSTTAFRDFPAWVEDKFQLPKLDCKHSNQG-DEETV 62
           P +VV DV+NHYETRI KFKTAVDP TTAFRDFPAWVEDKFQLPK DC+HSNQG +EETV
Sbjct: 230 PDIVVIDVRNHYETRIGKFKTAVDPCTTAFRDFPAWVEDKFQLPKSDCEHSNQGVEEETV 289

Query: 63  NPEESSPPRVAMYCTGGIRCEKASSYLLRKGFKEVYHLEGGILKYLEEVPRSESLREGEC 122
           NPEE SPPRVAMYCTGGIRCEKASSYLL KGFKEVYHLEGGILKYLEEVP+SESL  GEC
Sbjct: 290 NPEEDSPPRVAMYCTGGIRCEKASSYLLSKGFKEVYHLEGGILKYLEEVPKSESLWVGEC 349

Query: 123 FVFDKRDSVEHGLEQGTFKLCYGYKQPVSDGDMESPQW 160
           FVFDKR SVEHGLEQGTFKLCYG KQPVSD DMESP+W
Sbjct: 350 FVFDKRVSVEHGLEQGTFKLCYGCKQPVSDADMESPEW 387

BLAST of Cmc10g0277861 vs. ExPASy Swiss-Prot
Match: Q1JPN0 (Rhodanese-like domain-containing protein 7 OS=Arabidopsis thaliana OX=3702 GN=STR7 PE=2 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 4.2e-54
Identity = 106/166 (63.86%), Postives = 126/166 (75.90%), Query Frame = 0

Query: 3   PLVVVTDVQNHYETRIEKFKTAVDPSTTAFRDFPAWVEDKFQLP----KLDCKHSNQGDE 62
           P  VV DV+N YETRI KFK AVDP TTAFR+FP+WVE++F L     +   K   +   
Sbjct: 247 PETVVIDVRNTYETRIGKFKGAVDPCTTAFRNFPSWVENQFALKQEGNETQAKVEKEDFS 306

Query: 63  ETVNPEESSP-----PRVAMYCTGGIRCEKASSYLLRKGFKEVYHLEGGILKYLEEVPRS 122
           E  + E+ +      PR+AMYCTGGIRCEKASS LL +GF+EVYHL+GGILKYLEEVP++
Sbjct: 307 EITHKEDKAEKPKTLPRIAMYCTGGIRCEKASSLLLSQGFEEVYHLKGGILKYLEEVPKT 366

Query: 123 ESLREGECFVFDKRDSVEHGLEQGTFKLCYGYKQPVSDGDMESPQW 160
           ESL EGECFVFDKR SVEHGL QGT KLCYG KQP+SD DME+P++
Sbjct: 367 ESLWEGECFVFDKRVSVEHGLAQGTHKLCYGCKQPISDEDMEAPEY 412

BLAST of Cmc10g0277861 vs. ExPASy Swiss-Prot
Match: Q1GYV1 (tRNA uridine(34) hydroxylase OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) OX=265072 GN=trhO PE=3 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 1.1e-38
Identity = 79/157 (50.32%), Postives = 102/157 (64.97%), Query Frame = 0

Query: 3   PLVVVTDVQNHYETRIEKFKTAVDPSTTAFRDFPAWVEDKFQLPKLDCKHSNQGDEETVN 62
           P VVV D +N+YE  I  FK A+DP+TT FR FP +V                      N
Sbjct: 125 PDVVVIDTRNNYEYEIGTFKGAIDPATTTFRQFPEFVRK--------------------N 184

Query: 63  PEESSPPRVAMYCTGGIRCEKASSYLLRKGFKEVYHLEGGILKYLEEVPRSESLREGECF 122
            + +   +VAM+CTGGIRCEKASSY+L +GFKEVYHL+GGILKYLE +P  ESL EGECF
Sbjct: 185 LDPAKNKKVAMFCTGGIRCEKASSYMLEQGFKEVYHLQGGILKYLETIPEEESLWEGECF 244

Query: 123 VFDKRDSVEHGLEQGTFKLCYGYKQPVSDGDMESPQW 160
           VFD+R +V+HGL+ G +  C+  + P+S  DM S ++
Sbjct: 245 VFDQRVAVKHGLQVGDYDQCFACRHPISAADMASSKY 261

BLAST of Cmc10g0277861 vs. ExPASy Swiss-Prot
Match: Q1MBM8 (tRNA uridine(34) hydroxylase OS=Rhizobium leguminosarum bv. viciae (strain 3841) OX=216596 GN=trhO PE=3 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 3.2e-38
Identity = 76/155 (49.03%), Postives = 101/155 (65.16%), Query Frame = 0

Query: 3   PLVVVTDVQNHYETRIEKFKTAVDPSTTAFRDFPAWVEDKFQLPKLDCKHSNQGDEETVN 62
           P  +V D +N YET I  F+ A+DP T +FR+FP WV                      N
Sbjct: 132 PDTIVIDTRNDYETAIGTFRGALDPKTKSFREFPEWVRQ--------------------N 191

Query: 63  PEESSPPRVAMYCTGGIRCEKASSYLLRKGFKEVYHLEGGILKYLEEVPRSESLREGECF 122
           P   + P+VAMYCTGGIRCEKA++++  +GF EVYHL+GGILKYLEEVP+ ESL +G CF
Sbjct: 192 PGLHNKPKVAMYCTGGIRCEKATAFMKAEGFDEVYHLKGGILKYLEEVPQEESLWDGACF 251

Query: 123 VFDKRDSVEHGLEQGTFKLCYGYKQPVSDGDMESP 158
           VFD+R SVEHGL++G  +LC+  + P++  +  SP
Sbjct: 252 VFDERVSVEHGLKEGEHRLCHACRNPITAEETTSP 266

BLAST of Cmc10g0277861 vs. ExPASy Swiss-Prot
Match: Q92LX6 (tRNA uridine(34) hydroxylase OS=Rhizobium meliloti (strain 1021) OX=266834 GN=trhO PE=3 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 4.2e-38
Identity = 76/155 (49.03%), Postives = 101/155 (65.16%), Query Frame = 0

Query: 3   PLVVVTDVQNHYETRIEKFKTAVDPSTTAFRDFPAWVEDKFQLPKLDCKHSNQGDEETVN 62
           P  +V D +N YET I  F+ AVDP T  FR+FP WV +                    N
Sbjct: 138 PETLVIDTRNDYETAIGLFQGAVDPKTKTFREFPEWVRN--------------------N 197

Query: 63  PEESSPPRVAMYCTGGIRCEKASSYLLRKGFKEVYHLEGGILKYLEEVPRSESLREGECF 122
               + P++AMYCTGGIRCEKA++++  +GF+EVYHL+GGILKYLEE+P  ESL EG CF
Sbjct: 198 SGLHNKPKIAMYCTGGIRCEKATAFMKEQGFEEVYHLKGGILKYLEEIPPEESLWEGACF 257

Query: 123 VFDKRDSVEHGLEQGTFKLCYGYKQPVSDGDMESP 158
           VFD+R SV HGL++G   LC+  +QP++  D++SP
Sbjct: 258 VFDERVSVTHGLQEGEHTLCHACRQPLTPEDLQSP 272

BLAST of Cmc10g0277861 vs. ExPASy Swiss-Prot
Match: A6UD82 (tRNA uridine(34) hydroxylase OS=Sinorhizobium medicae (strain WSM419) OX=366394 GN=trhO PE=3 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 7.2e-38
Identity = 76/155 (49.03%), Postives = 100/155 (64.52%), Query Frame = 0

Query: 3   PLVVVTDVQNHYETRIEKFKTAVDPSTTAFRDFPAWVEDKFQLPKLDCKHSNQGDEETVN 62
           P  +V D +N YET I  F+ AVDP T  FR+FP WV +                    N
Sbjct: 138 PETLVIDTRNDYETAIGVFQGAVDPKTKTFREFPEWVRN--------------------N 197

Query: 63  PEESSPPRVAMYCTGGIRCEKASSYLLRKGFKEVYHLEGGILKYLEEVPRSESLREGECF 122
               + P++AMYCTGGIRCEKA++++  +GF+EVYHL+GGILKYLEE+P  ESL EG CF
Sbjct: 198 SGLHNKPKIAMYCTGGIRCEKATAFMKEQGFEEVYHLKGGILKYLEEIPPEESLWEGACF 257

Query: 123 VFDKRDSVEHGLEQGTFKLCYGYKQPVSDGDMESP 158
           VFD+R SV HGL++G   LC+  +QP++  D+ SP
Sbjct: 258 VFDERVSVTHGLQEGEHTLCHACRQPLTTEDLRSP 272

BLAST of Cmc10g0277861 vs. ExPASy TrEMBL
Match: A0A1S4E1C5 (LOW QUALITY PROTEIN: rhodanese-like domain-containing protein 7 OS=Cucumis melo OX=3656 GN=LOC103496761 PE=3 SV=1)

HSP 1 Score: 323.9 bits (829), Expect = 3.7e-85
Identity = 153/157 (97.45%), Postives = 153/157 (97.45%), Query Frame = 0

Query: 3   PLVVVTDVQNHYETRIEKFKTAVDPSTTAFRDFPAWVEDKFQLPKLDCKHSNQGDEETVN 62
           P  VVTDVQNHYETRIEKFKTAVDPSTTAFRDFPAWVEDKFQLPKLDCKHSNQGDEETVN
Sbjct: 239 PDTVVTDVQNHYETRIEKFKTAVDPSTTAFRDFPAWVEDKFQLPKLDCKHSNQGDEETVN 298

Query: 63  PEESSPPRVAMYCTGGIRCEKASSYLLRKGFKEVYHLEGGILKYLEEVPRSESLREGECF 122
           PEESSP RVAMYCTGGIRCEKASSYLLRKGFKEVYHLEGGILKYLEEVPRSESLREGECF
Sbjct: 299 PEESSPLRVAMYCTGGIRCEKASSYLLRKGFKEVYHLEGGILKYLEEVPRSESLREGECF 358

Query: 123 VFDKRDSVEHGLEQGTFKLCYGYKQPVSDGDMESPQW 160
           VFDKRDSVEHGLEQGTFKLCYGYKQPVSD DMESPQW
Sbjct: 359 VFDKRDSVEHGLEQGTFKLCYGYKQPVSDADMESPQW 395

BLAST of Cmc10g0277861 vs. ExPASy TrEMBL
Match: A0A5A7VF76 (Rhodanese-like domain-containing protein 7 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold14G00220 PE=4 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 6.2e-85
Identity = 152/154 (98.70%), Postives = 152/154 (98.70%), Query Frame = 0

Query: 6   VVTDVQNHYETRIEKFKTAVDPSTTAFRDFPAWVEDKFQLPKLDCKHSNQGDEETVNPEE 65
           VVTDVQNHYETRIEKFKTAVDPSTTAFRDFPAWVEDKFQLPKLDCKHSNQGDEETVNPEE
Sbjct: 102 VVTDVQNHYETRIEKFKTAVDPSTTAFRDFPAWVEDKFQLPKLDCKHSNQGDEETVNPEE 161

Query: 66  SSPPRVAMYCTGGIRCEKASSYLLRKGFKEVYHLEGGILKYLEEVPRSESLREGECFVFD 125
           SSP RVAMYCTGGIRCEKASSYLLRKGFKEVYHLEGGILKYLEEVPRSESLREGECFVFD
Sbjct: 162 SSPLRVAMYCTGGIRCEKASSYLLRKGFKEVYHLEGGILKYLEEVPRSESLREGECFVFD 221

Query: 126 KRDSVEHGLEQGTFKLCYGYKQPVSDGDMESPQW 160
           KRDSVEHGLEQGTFKLCYGYKQPVSD DMESPQW
Sbjct: 222 KRDSVEHGLEQGTFKLCYGYKQPVSDADMESPQW 255

BLAST of Cmc10g0277861 vs. ExPASy TrEMBL
Match: A0A0A0KM63 (Rhodanese domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G223080 PE=3 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 2.1e-77
Identity = 141/157 (89.81%), Postives = 145/157 (92.36%), Query Frame = 0

Query: 3   PLVVVTDVQNHYETRIEKFKTAVDPSTTAFRDFPAWVEDKFQLPKLDCKHSNQGDEETVN 62
           P  VV DV+NHYETRI KFKTAVDP TTAFRDFPAWVEDK QLPKLDCKHSNQG EETVN
Sbjct: 245 PDTVVIDVRNHYETRIGKFKTAVDPCTTAFRDFPAWVEDKLQLPKLDCKHSNQGGEETVN 304

Query: 63  PEESSPPRVAMYCTGGIRCEKASSYLLRKGFKEVYHLEGGILKYLEEVPRSESLREGECF 122
           P+ESSPPRVAMYCTGGIRCEKASSYLL KGFKEVYHLEGGILKYLEEVP+SESL EGECF
Sbjct: 305 PKESSPPRVAMYCTGGIRCEKASSYLLSKGFKEVYHLEGGILKYLEEVPKSESLWEGECF 364

Query: 123 VFDKRDSVEHGLEQGTFKLCYGYKQPVSDGDMESPQW 160
           VFDKR SVEHGLEQGTFKLCYG KQPVSD DMESP+W
Sbjct: 365 VFDKRVSVEHGLEQGTFKLCYGCKQPVSDADMESPEW 401

BLAST of Cmc10g0277861 vs. ExPASy TrEMBL
Match: A0A6J1FRM3 (rhodanese-like domain-containing protein 7 OS=Cucurbita moschata OX=3662 GN=LOC111447816 PE=3 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 3.0e-71
Identity = 133/158 (84.18%), Postives = 141/158 (89.24%), Query Frame = 0

Query: 3   PLVVVTDVQNHYETRIEKFKTAVDPSTTAFRDFPAWVEDKFQLPKLDCKHSNQGDE-ETV 62
           P  VV DV+NHYETRI KFK AVDP T AFRDFP WVEDKFQLPK DC+HSN+  E +TV
Sbjct: 238 PDTVVIDVRNHYETRIGKFKRAVDPCTPAFRDFPFWVEDKFQLPKSDCEHSNEEVEGKTV 297

Query: 63  NPEESSPPRVAMYCTGGIRCEKASSYLLRKGFKEVYHLEGGILKYLEEVPRSESLREGEC 122
           NPE++SPPRVAMYCTGGIRCEKASSYLL KGFKEVYHLEGGILKYLEEVP++ESL EGEC
Sbjct: 298 NPEQNSPPRVAMYCTGGIRCEKASSYLLSKGFKEVYHLEGGILKYLEEVPKTESLWEGEC 357

Query: 123 FVFDKRDSVEHGLEQGTFKLCYGYKQPVSDGDMESPQW 160
           FVFDKR SVEHGLEQGTFKLCYG KQPVSD DMESPQW
Sbjct: 358 FVFDKRVSVEHGLEQGTFKLCYGCKQPVSDADMESPQW 395

BLAST of Cmc10g0277861 vs. ExPASy TrEMBL
Match: A0A6J1JDN9 (rhodanese-like domain-containing protein 7 OS=Cucurbita maxima OX=3661 GN=LOC111485926 PE=3 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 3.9e-71
Identity = 133/158 (84.18%), Postives = 141/158 (89.24%), Query Frame = 0

Query: 3   PLVVVTDVQNHYETRIEKFKTAVDPSTTAFRDFPAWVEDKFQLPKLDCKHSNQGDE-ETV 62
           P  VV DV+NHYETRI KFK AVDP T AFRDFP WVEDKFQLPK DC+HSN+  E +TV
Sbjct: 224 PDTVVIDVRNHYETRIGKFKRAVDPCTPAFRDFPFWVEDKFQLPKSDCEHSNEEVEGKTV 283

Query: 63  NPEESSPPRVAMYCTGGIRCEKASSYLLRKGFKEVYHLEGGILKYLEEVPRSESLREGEC 122
           NPEE+SPPRVAMYCTGGIRCEKASSYLL KGFKEVYHLEGGILKYLEEVP++ESL EGEC
Sbjct: 284 NPEENSPPRVAMYCTGGIRCEKASSYLLSKGFKEVYHLEGGILKYLEEVPKTESLWEGEC 343

Query: 123 FVFDKRDSVEHGLEQGTFKLCYGYKQPVSDGDMESPQW 160
           FVFDKR SVEHGLEQGTFKLCYG KQPVSD D+ESPQW
Sbjct: 344 FVFDKRVSVEHGLEQGTFKLCYGCKQPVSDADIESPQW 381

BLAST of Cmc10g0277861 vs. TAIR 10
Match: AT2G40760.1 (Rhodanese/Cell cycle control phosphatase superfamily protein )

HSP 1 Score: 212.2 bits (539), Expect = 3.0e-55
Identity = 106/166 (63.86%), Postives = 126/166 (75.90%), Query Frame = 0

Query: 3   PLVVVTDVQNHYETRIEKFKTAVDPSTTAFRDFPAWVEDKFQLP----KLDCKHSNQGDE 62
           P  VV DV+N YETRI KFK AVDP TTAFR+FP+WVE++F L     +   K   +   
Sbjct: 247 PETVVIDVRNTYETRIGKFKGAVDPCTTAFRNFPSWVENQFALKQEGNETQAKVEKEDFS 306

Query: 63  ETVNPEESSP-----PRVAMYCTGGIRCEKASSYLLRKGFKEVYHLEGGILKYLEEVPRS 122
           E  + E+ +      PR+AMYCTGGIRCEKASS LL +GF+EVYHL+GGILKYLEEVP++
Sbjct: 307 EITHKEDKAEKPKTLPRIAMYCTGGIRCEKASSLLLSQGFEEVYHLKGGILKYLEEVPKT 366

Query: 123 ESLREGECFVFDKRDSVEHGLEQGTFKLCYGYKQPVSDGDMESPQW 160
           ESL EGECFVFDKR SVEHGL QGT KLCYG KQP+SD DME+P++
Sbjct: 367 ESLWEGECFVFDKRVSVEHGLAQGTHKLCYGCKQPISDEDMEAPEY 412

BLAST of Cmc10g0277861 vs. TAIR 10
Match: AT1G09280.1 (CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763), Serine hydrolase (InterPro:IPR005645); BEST Arabidopsis thaliana protein match is: Rhodanese/Cell cycle control phosphatase superfamily protein (TAIR:AT2G40760.1); Has 5925 Blast hits to 5912 proteins in 1592 species: Archae - 0; Bacteria - 2946; Metazoa - 156; Fungi - 408; Plants - 229; Viruses - 0; Other Eukaryotes - 2186 (source: NCBI BLink). )

HSP 1 Score: 86.3 bits (212), Expect = 2.5e-17
Identity = 55/146 (37.67%), Postives = 74/146 (50.68%), Query Frame = 0

Query: 5   VVVTDVQNHYETRIEKFKT----AVDPSTTAFRDFPAWVEDKFQLPKLDCKHSNQGDEET 64
           +V+ D +N YETRI KF++     +DP    + D P W++                    
Sbjct: 162 LVLLDARNLYETRIGKFESENVETLDPEIRQYSDLPTWIDQ------------------- 221

Query: 65  VNPEESSPPRVAMYCTGGIRCEKASSYLLRK--GFKEVYHLEGGILKYLEEVPRSESLRE 124
            N E+     V MYCTGGIRCE AS+Y+  K  GF+  + L GGI +YLE+ P S    +
Sbjct: 222 -NAEKMKGKNVLMYCTGGIRCEMASAYIRSKGAGFENTFQLYGGIQRYLEQFP-SGGFFK 281

Query: 125 GECFVFDKRDSVEHGLEQ--GTFKLC 143
           G+ FVFD R SV    E   G+  LC
Sbjct: 282 GKNFVFDHRISVGSSKEDIIGSCLLC 286

BLAST of Cmc10g0277861 vs. TAIR 10
Match: AT1G17850.1 (Rhodanese/Cell cycle control phosphatase superfamily protein )

HSP 1 Score: 71.6 bits (174), Expect = 6.3e-13
Identity = 42/125 (33.60%), Postives = 67/125 (53.60%), Query Frame = 0

Query: 6   VVTDVQNHYETRIEKFKTAVDPSTTAFRDFPAWVEDKFQLPKLDCKHSNQGDEETVNPEE 65
           ++ DV+N YE  +  F+ A  P    FR+    + D+ + P           +  +N ++
Sbjct: 223 ILLDVRNGYEWDVGHFRGAHRPEVDCFRNTSFGLSDEKEAP----------SDPLINVDK 282

Query: 66  SSPPRVAMYCTGGIRCEKASSYLLRKGFKEVYHLEGGILKYLEEVPRSESLREGECFVFD 125
                + MYCTGGIRC+  S+ L ++GFK +Y L+GG+  YL+E   +E +  G  FVFD
Sbjct: 283 EKTD-ILMYCTGGIRCDVYSTVLRQRGFKNLYTLKGGVSHYLKEEGTAEWV--GNLFVFD 334

Query: 126 KRDSV 131
            R S+
Sbjct: 343 SRLSL 334

BLAST of Cmc10g0277861 vs. TAIR 10
Match: AT1G17850.2 (Rhodanese/Cell cycle control phosphatase superfamily protein )

HSP 1 Score: 71.6 bits (174), Expect = 6.3e-13
Identity = 42/125 (33.60%), Postives = 67/125 (53.60%), Query Frame = 0

Query: 6   VVTDVQNHYETRIEKFKTAVDPSTTAFRDFPAWVEDKFQLPKLDCKHSNQGDEETVNPEE 65
           ++ DV+N YE  +  F+ A  P    FR+    + D+ + P           +  +N ++
Sbjct: 225 ILLDVRNGYEWDVGHFRGAHRPEVDCFRNTSFGLSDEKEAP----------SDPLINVDK 284

Query: 66  SSPPRVAMYCTGGIRCEKASSYLLRKGFKEVYHLEGGILKYLEEVPRSESLREGECFVFD 125
                + MYCTGGIRC+  S+ L ++GFK +Y L+GG+  YL+E   +E +  G  FVFD
Sbjct: 285 EKTD-ILMYCTGGIRCDVYSTVLRQRGFKNLYTLKGGVSHYLKEEGTAEWV--GNLFVFD 336

Query: 126 KRDSV 131
            R S+
Sbjct: 345 SRLSL 336

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_016902023.17.5e-8597.45PREDICTED: LOW QUALITY PROTEIN: rhodanese-like domain-containing protein 7 [Cucu... [more]
KAA0067022.11.3e-8498.70rhodanese-like domain-containing protein 7 [Cucumis melo var. makuwa] >TYK26258.... [more]
KAE8648056.14.4e-7789.81hypothetical protein Csa_005784 [Cucumis sativus][more]
XP_004146431.24.4e-7789.81rhodanese-like domain-containing protein 7 [Cucumis sativus][more]
XP_038892558.14.2e-7587.97rhodanese-like domain-containing protein 7 [Benincasa hispida][more]
Match NameE-valueIdentityDescription
Q1JPN04.2e-5463.86Rhodanese-like domain-containing protein 7 OS=Arabidopsis thaliana OX=3702 GN=ST... [more]
Q1GYV11.1e-3850.32tRNA uridine(34) hydroxylase OS=Methylobacillus flagellatus (strain KT / ATCC 51... [more]
Q1MBM83.2e-3849.03tRNA uridine(34) hydroxylase OS=Rhizobium leguminosarum bv. viciae (strain 3841)... [more]
Q92LX64.2e-3849.03tRNA uridine(34) hydroxylase OS=Rhizobium meliloti (strain 1021) OX=266834 GN=tr... [more]
A6UD827.2e-3849.03tRNA uridine(34) hydroxylase OS=Sinorhizobium medicae (strain WSM419) OX=366394 ... [more]
Match NameE-valueIdentityDescription
A0A1S4E1C53.7e-8597.45LOW QUALITY PROTEIN: rhodanese-like domain-containing protein 7 OS=Cucumis melo ... [more]
A0A5A7VF766.2e-8598.70Rhodanese-like domain-containing protein 7 OS=Cucumis melo var. makuwa OX=119469... [more]
A0A0A0KM632.1e-7789.81Rhodanese domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G223080 P... [more]
A0A6J1FRM33.0e-7184.18rhodanese-like domain-containing protein 7 OS=Cucurbita moschata OX=3662 GN=LOC1... [more]
A0A6J1JDN93.9e-7184.18rhodanese-like domain-containing protein 7 OS=Cucurbita maxima OX=3661 GN=LOC111... [more]
Match NameE-valueIdentityDescription
AT2G40760.13.0e-5563.86Rhodanese/Cell cycle control phosphatase superfamily protein [more]
AT1G09280.12.5e-1737.67CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763), Serine hydrolas... [more]
AT1G17850.16.3e-1333.60Rhodanese/Cell cycle control phosphatase superfamily protein [more]
AT1G17850.26.3e-1333.60Rhodanese/Cell cycle control phosphatase superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001763Rhodanese-like domainSMARTSM00450rhod_4coord: 5..112
e-value: 2.5E-4
score: 30.4
IPR001763Rhodanese-like domainPROSITEPS50206RHODANESE_3coord: 70..115
score: 13.813865
IPR036873Rhodanese-like domain superfamilyGENE3D3.40.250.10coord: 3..151
e-value: 1.2E-37
score: 130.7
IPR036873Rhodanese-like domain superfamilySUPERFAMILY52821Rhodanese/Cell cycle control phosphatasecoord: 7..141
NoneNo IPR availablePANTHERPTHR43268:SF3THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2coord: 5..152
IPR020936tRNA uridine(34) hydroxylasePANTHERPTHR43268THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2coord: 5..152

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc10g0277861.1Cmc10g0277861.1mRNA