Cmc10g0277861 (gene) Melon (Charmono) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTTCCTTTAGTAGTATTTTGGCCCCTATTTATTCACCAATGTAATAGGTTATTATCTGCATCTTGATTTATTCAATATATTATATAAAATTGAACATTTTTATTTATATTGTTTAAGTTATCAATCGTTTACGTGGGATTCGGGTTTCTGCATATGTTTTGATTATTGAATTGTTATTGAACTTAAAAATGTAATATCACGATAGGAACTGTATTCCGTTGGTTGCATATATGTTCTGATTGTCTGGCCGATCATTCAGAGACTTCATACTTCTTCTCATTGAAGAGAATAAGGTGACCTTGCTAAATAATTAAATGATAACGTAGGTGGTTACTGATGTGCAAAATCACTACGAAACAAGGATTGAAAAGTTCAAAACAGCAGTTGATCCTTCTACTACAGCATTTCGAGATTTTCCTGCTTGGGTGGAAGATAAATTCCAACTTCCTAAATTAGATTGCAAACATTCAAATCAAGGAGATGAAGAAACAGTAAACCCTGAAGAGAGCTCGCCCCCGCGAGTTGCCATGTATTGCACTGGAGGAATTCGCTGTGAGAAAGCCTCGAGTTATCTCCTAAGAAAAGGGTTTAAAGAGGTGAACTTGTTGATCTCTATATAATACGATTTGCTTTTGATGAACTTTTTGAATAAACTTTGGACATGACATATGTTCGTGAGTTCGTCAAGCTCAAACGCAATAGGTCTTATAGGAAAAATGCTAATAATTATTTTCTTTTCAAAATAATAAAATTCTTGATGAAGGGCTTCATAGAAGGTGCACGCCTTGCCTTCTTCTTTTAGATAATTGCTGCCTTGAAAAGTCACAGGCTTTTCAGAAATAAGTGTTCCTAGATTGATGATCGATGCATGCACTTAAATCTTGGAAGTGTTTAATCAAATCATTTTTGCATGACACGCAATTGCTTTCTCATGTATTTTTCTATCTGAGACACTAAAAATCTGATGCATCATCCTATCTGAATGATTTTTAGGTTTATCATTTGGAAGGTGGAATTCTGAAATATTTGGAGGAAGTTCCAAGGTCAGAGAGTCTAAGGGAAGGCGAATGCTTTGTATTTGACAAGCGTGACTCAGTTGAGCATGGTCTGGAGCAGGGCACATTCAAACTCTGTTATGGGTACAAGCAACCGGTGAGTGATGGTGACATGGAATCTCCTCAGTGGTAGTATGGAGTTTCTTGTCCTTACTGTTTCTCGACGAAATCTGATGAAGAGAAGGAGAGAGCAAGAGCTCGGCAAAGGCAATTTGAGACTTGGGGCATCATTGGTGGTCCGGACAAAGGCCGGCGTCCAACACAAAATGATAACAACGTTAATCATCCAAATTCAGTTTGATGCTTTGCTACTTAAGGTTCTTTTGTCATTTTTGTATTAGGGAATTATGCAAAGGACAAACCAAAACATCCATCTCCGCCTTGATTATTGTCTTGTGTACAATATATCATTTTTGTTAATTATGACAAAATTGAGAAATTTTGAGCATGGTCCTCTATTAAATGAACTTCGATACATTCAGATTCGAAGACTTTCTCCCATTCTTTTTTGTCTCTCTGTTTTAATGACACATGAGCAACAAAGAAAGCCGTAAAGTGATGAGAACAAACCAAGGATTTATTAAACTAGATTCGATACAAGTACGGCTCCTTTGGGGCTAAAGAGATAAAAGAAACATAAAACAAATGAAGACAGGTGAAAAGGGTTTGTTGAAGTTCCTCCATCCAAAGCTCAGGAATCTCCTACATCCCATCAACATTGAAGCTGCGGCGTTATGGAGTGTTGCTGGGACAGCCACTGCTTTTGGCTTGTACAGGTATTCGTCTTTAGCTTCACCGACTCTTTTCTTTTCATCTACCAGCATGTTTCTGTTTGTTGTGAAAAATCGTAACTATTCTTATCGTCTTGAAACTGAAAAAACATGGCAGCCATTTGACTGGTTGAAGAAGAAGGTTTGGAAGGTAGAGGAGAAAGAAGAAAACGAGGTGCAAACTAATGAATAAGATAGCTATTGTAAAAGTATATCCACTGTCCGAAGAACTTTAATACCAAATAACTTGGTAACTCTGAATAAAGATTTGATATGATATGAACATGTTTATCCTTCTTTCTATTTCTTCAAATTCATCATCGGGATTCAAGAATGGTGAGGCGGAGGAGGAGGAGGAGGAGGAGCAACAGCATCAGAATGTTGCTTGAGAGCTTGGAAAACTTCAGAACTGGAGCTGAAAATCTTAGCTCTTCTATTATAATCTGTTGGCTCTCTCCCTTCATCTTCTCCCATAATGGCTTCTTTTTCCATACATTCAAGTAGCTCCACTATTCCCTTTCCTCCGCTGCCGCACTTCTCCTCCAACCTGCCTAGCTTCAGCCACTCTTCTATGTCCACCTCCGCCACAGAGGTTCCCCATCCACCCTGACTAACACATCTTGGCTCTGCCACCGCCTCCGCAGCTCGATGGCCGAGCCATGGTGAGGAAAGGGATGGAGTTGACCTGAGCTTAGGGAAGAAGGCGGTGGAGGGGCGGAGGAGGGGTGGTGGAATTATGAGAGATGTTGAGAGTTGCATATTGTGTTTGTTTGGTGGTGAGGTGTTTGTTCTTTTTGTTTTTTCGCCTTTCTCTTTGAGAAATGTAGGGAGAGATTTTGGGAGAGGGAGTTTGGAGTTTGTATTATTATAGGAATTTTTCAAGAGAAAAACAAGCACCGCCATTAACCACCGTTTGGACGTTGAACGTGGCAGTCCATGCAATGGCACGAGCTCACGTGCTCTCTTATTCATCATTCTAATTTATATATAATTAGGATAATGCTCATTG ATGTTTCCTTTAGTAGTGGTTACTGATGTGCAAAATCACTACGAAACAAGGATTGAAAAGTTCAAAACAGCAGTTGATCCTTCTACTACAGCATTTCGAGATTTTCCTGCTTGGGTGGAAGATAAATTCCAACTTCCTAAATTAGATTGCAAACATTCAAATCAAGGAGATGAAGAAACAGTAAACCCTGAAGAGAGCTCGCCCCCGCGAGTTGCCATGTATTGCACTGGAGGAATTCGCTGTGAGAAAGCCTCGAGTTATCTCCTAAGAAAAGGGTTTAAAGAGGTTTATCATTTGGAAGGTGGAATTCTGAAATATTTGGAGGAAGTTCCAAGGTCAGAGAGTCTAAGGGAAGGCGAATGCTTTGTATTTGACAAGCGTGACTCAGTTGAGCATGGTCTGGAGCAGGGCACATTCAAACTCTGTTATGGGTACAAGCAACCGGTGAGTGATGGTGACATGGAATCTCCTCAGTGGTAGTATGGAGTTTCTTGTCCTTACTGTTTCTCGACGAAATCTGATGAAGAGAAGGAGAGAGCAAGAGCTCGGCAAAGGCAATTTGAGACTTGGGGCATCATTGGTGGTCCGGACAAAGGCCGGCGTCCAACACAAAATGATAACAACGTTAATCATCCAAATTCAGTTTGATGCTTTGCTACTTAAGGTTCTTTTGTCATTTTTGTATTAGGGAATTATGCAAAGGACAAACCAAAACATCCATCTCCGCCTTGATTATTGTCTTGTGTACAATATATCATTTTTGTTAATTATGACAAAATTGAGAAATTTTGAGCATGGTCCTCTATTAAATGAACTTCGATACATTCAGATTCGAAGACTTTCTCCCATTCTTTTTTGTCTCTCTGTTTTAATGACACATGAGCAACAAAGAAAGCCGTAAAGTGATGAGAACAAACCAAGGATTTATTAAACTAGATTCGATACAAGTACGGCTCCTTTGGGGCTAAAGAGATAAAAGAAACATAAAACAAATGAAGACAGGTGAAAAGGGTTTGTTGAAGTTCCTCCATCCAAAGCTCAGGAATCTCCTACATCCCATCAACATTGAAGCTGCGGCGTTATGGAGTGTTGCTGGGACAGCCACTGCTTTTGGCTTGTACAGCCATTTGACTGGTTGAAGAAGAAGGTTTGGAAGGTAGAGGAGAAAGAAGAAAACGAGGTGCAAACTAATGAATAAGATAGCTATTGTAAAAGTATATCCACTGTCCGAAGAACTTTAATACCAAATAACTTGGTAACTCTGAATAAAGATTTGATATGATATGAACATGTTTATCCTTCTTTCTATTTCTTCAAATTCATCATCGGGATTCAAGAATGGTGAGGCGGAGGAGGAGGAGGAGGAGGAGCAACAGCATCAGAATGTTGCTTGAGAGCTTGGAAAACTTCAGAACTGGAGCTGAAAATCTTAGCTCTTCTATTATAATCTGTTGGCTCTCTCCCTTCATCTTCTCCCATAATGGCTTCTTTTTCCATACATTCAAGTAGCTCCACTATTCCCTTTCCTCCGCTGCCGCACTTCTCCTCCAACCTGCCTAGCTTCAGCCACTCTTCTATGTCCACCTCCGCCACAGAGGTTCCCCATCCACCCTGACTAACACATCTTGGCTCTGCCACCGCCTCCGCAGCTCGATGGCCGAGCCATGGTGAGGAAAGGGATGGAGTTGACCTGAGCTTAGGGAAGAAGGCGGTGGAGGGGCGGAGGAGGGGTGGTGGAATTATGAGAGATGTTGAGAGTTGCATATTGTGTTTGTTTGGTGGTGAGGTGTTTGTTCTTTTTGTTTTTTCGCCTTTCTCTTTGAGAAATGTAGGGAGAGATTTTGGGAGAGGGAGTTTGGAGTTTGTATTATTATAGGAATTTTTCAAGAGAAAAACAAGCACCGCCATTAACCACCGTTTGGACGTTGAACGTGGCAGTCCATGCAATGGCACGAGCTCACGTGCTCTCTTATTCATCATTCTAATTTATATATAATTAGGATAATGCTCATTG ATGTTTCCTTTAGTAGTGGTTACTGATGTGCAAAATCACTACGAAACAAGGATTGAAAAGTTCAAAACAGCAGTTGATCCTTCTACTACAGCATTTCGAGATTTTCCTGCTTGGGTGGAAGATAAATTCCAACTTCCTAAATTAGATTGCAAACATTCAAATCAAGGAGATGAAGAAACAGTAAACCCTGAAGAGAGCTCGCCCCCGCGAGTTGCCATGTATTGCACTGGAGGAATTCGCTGTGAGAAAGCCTCGAGTTATCTCCTAAGAAAAGGGTTTAAAGAGGTTTATCATTTGGAAGGTGGAATTCTGAAATATTTGGAGGAAGTTCCAAGGTCAGAGAGTCTAAGGGAAGGCGAATGCTTTGTATTTGACAAGCGTGACTCAGTTGAGCATGGTCTGGAGCAGGGCACATTCAAACTCTGTTATGGGTACAAGCAACCGGTGAGTGATGGTGACATGGAATCTCCTCAGTGGTAG MFPLVVVTDVQNHYETRIEKFKTAVDPSTTAFRDFPAWVEDKFQLPKLDCKHSNQGDEETVNPEESSPPRVAMYCTGGIRCEKASSYLLRKGFKEVYHLEGGILKYLEEVPRSESLREGECFVFDKRDSVEHGLEQGTFKLCYGYKQPVSDGDMESPQW Homology
BLAST of Cmc10g0277861 vs. NCBI nr
Match: XP_016902023.1 (PREDICTED: LOW QUALITY PROTEIN: rhodanese-like domain-containing protein 7 [Cucumis melo]) HSP 1 Score: 323.9 bits (829), Expect = 7.5e-85 Identity = 153/157 (97.45%), Postives = 153/157 (97.45%), Query Frame = 0
BLAST of Cmc10g0277861 vs. NCBI nr
Match: KAA0067022.1 (rhodanese-like domain-containing protein 7 [Cucumis melo var. makuwa] >TYK26258.1 rhodanese-like domain-containing protein 7 [Cucumis melo var. makuwa]) HSP 1 Score: 323.2 bits (827), Expect = 1.3e-84 Identity = 152/154 (98.70%), Postives = 152/154 (98.70%), Query Frame = 0
BLAST of Cmc10g0277861 vs. NCBI nr
Match: KAE8648056.1 (hypothetical protein Csa_005784 [Cucumis sativus]) HSP 1 Score: 298.1 bits (762), Expect = 4.4e-77 Identity = 141/157 (89.81%), Postives = 145/157 (92.36%), Query Frame = 0
BLAST of Cmc10g0277861 vs. NCBI nr
Match: XP_004146431.2 (rhodanese-like domain-containing protein 7 [Cucumis sativus]) HSP 1 Score: 298.1 bits (762), Expect = 4.4e-77 Identity = 141/157 (89.81%), Postives = 145/157 (92.36%), Query Frame = 0
BLAST of Cmc10g0277861 vs. NCBI nr
Match: XP_038892558.1 (rhodanese-like domain-containing protein 7 [Benincasa hispida]) HSP 1 Score: 291.6 bits (745), Expect = 4.2e-75 Identity = 139/158 (87.97%), Postives = 145/158 (91.77%), Query Frame = 0
BLAST of Cmc10g0277861 vs. ExPASy Swiss-Prot
Match: Q1JPN0 (Rhodanese-like domain-containing protein 7 OS=Arabidopsis thaliana OX=3702 GN=STR7 PE=2 SV=1) HSP 1 Score: 212.2 bits (539), Expect = 4.2e-54 Identity = 106/166 (63.86%), Postives = 126/166 (75.90%), Query Frame = 0
BLAST of Cmc10g0277861 vs. ExPASy Swiss-Prot
Match: Q1GYV1 (tRNA uridine(34) hydroxylase OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) OX=265072 GN=trhO PE=3 SV=1) HSP 1 Score: 161.0 bits (406), Expect = 1.1e-38 Identity = 79/157 (50.32%), Postives = 102/157 (64.97%), Query Frame = 0
BLAST of Cmc10g0277861 vs. ExPASy Swiss-Prot
Match: Q1MBM8 (tRNA uridine(34) hydroxylase OS=Rhizobium leguminosarum bv. viciae (strain 3841) OX=216596 GN=trhO PE=3 SV=1) HSP 1 Score: 159.5 bits (402), Expect = 3.2e-38 Identity = 76/155 (49.03%), Postives = 101/155 (65.16%), Query Frame = 0
BLAST of Cmc10g0277861 vs. ExPASy Swiss-Prot
Match: Q92LX6 (tRNA uridine(34) hydroxylase OS=Rhizobium meliloti (strain 1021) OX=266834 GN=trhO PE=3 SV=1) HSP 1 Score: 159.1 bits (401), Expect = 4.2e-38 Identity = 76/155 (49.03%), Postives = 101/155 (65.16%), Query Frame = 0
BLAST of Cmc10g0277861 vs. ExPASy Swiss-Prot
Match: A6UD82 (tRNA uridine(34) hydroxylase OS=Sinorhizobium medicae (strain WSM419) OX=366394 GN=trhO PE=3 SV=1) HSP 1 Score: 158.3 bits (399), Expect = 7.2e-38 Identity = 76/155 (49.03%), Postives = 100/155 (64.52%), Query Frame = 0
BLAST of Cmc10g0277861 vs. ExPASy TrEMBL
Match: A0A1S4E1C5 (LOW QUALITY PROTEIN: rhodanese-like domain-containing protein 7 OS=Cucumis melo OX=3656 GN=LOC103496761 PE=3 SV=1) HSP 1 Score: 323.9 bits (829), Expect = 3.7e-85 Identity = 153/157 (97.45%), Postives = 153/157 (97.45%), Query Frame = 0
BLAST of Cmc10g0277861 vs. ExPASy TrEMBL
Match: A0A5A7VF76 (Rhodanese-like domain-containing protein 7 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold14G00220 PE=4 SV=1) HSP 1 Score: 323.2 bits (827), Expect = 6.2e-85 Identity = 152/154 (98.70%), Postives = 152/154 (98.70%), Query Frame = 0
BLAST of Cmc10g0277861 vs. ExPASy TrEMBL
Match: A0A0A0KM63 (Rhodanese domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G223080 PE=3 SV=1) HSP 1 Score: 298.1 bits (762), Expect = 2.1e-77 Identity = 141/157 (89.81%), Postives = 145/157 (92.36%), Query Frame = 0
BLAST of Cmc10g0277861 vs. ExPASy TrEMBL
Match: A0A6J1FRM3 (rhodanese-like domain-containing protein 7 OS=Cucurbita moschata OX=3662 GN=LOC111447816 PE=3 SV=1) HSP 1 Score: 277.7 bits (709), Expect = 3.0e-71 Identity = 133/158 (84.18%), Postives = 141/158 (89.24%), Query Frame = 0
BLAST of Cmc10g0277861 vs. ExPASy TrEMBL
Match: A0A6J1JDN9 (rhodanese-like domain-containing protein 7 OS=Cucurbita maxima OX=3661 GN=LOC111485926 PE=3 SV=1) HSP 1 Score: 277.3 bits (708), Expect = 3.9e-71 Identity = 133/158 (84.18%), Postives = 141/158 (89.24%), Query Frame = 0
BLAST of Cmc10g0277861 vs. TAIR 10
Match: AT2G40760.1 (Rhodanese/Cell cycle control phosphatase superfamily protein ) HSP 1 Score: 212.2 bits (539), Expect = 3.0e-55 Identity = 106/166 (63.86%), Postives = 126/166 (75.90%), Query Frame = 0
BLAST of Cmc10g0277861 vs. TAIR 10
Match: AT1G09280.1 (CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763), Serine hydrolase (InterPro:IPR005645); BEST Arabidopsis thaliana protein match is: Rhodanese/Cell cycle control phosphatase superfamily protein (TAIR:AT2G40760.1); Has 5925 Blast hits to 5912 proteins in 1592 species: Archae - 0; Bacteria - 2946; Metazoa - 156; Fungi - 408; Plants - 229; Viruses - 0; Other Eukaryotes - 2186 (source: NCBI BLink). ) HSP 1 Score: 86.3 bits (212), Expect = 2.5e-17 Identity = 55/146 (37.67%), Postives = 74/146 (50.68%), Query Frame = 0
BLAST of Cmc10g0277861 vs. TAIR 10
Match: AT1G17850.1 (Rhodanese/Cell cycle control phosphatase superfamily protein ) HSP 1 Score: 71.6 bits (174), Expect = 6.3e-13 Identity = 42/125 (33.60%), Postives = 67/125 (53.60%), Query Frame = 0
BLAST of Cmc10g0277861 vs. TAIR 10
Match: AT1G17850.2 (Rhodanese/Cell cycle control phosphatase superfamily protein ) HSP 1 Score: 71.6 bits (174), Expect = 6.3e-13 Identity = 42/125 (33.60%), Postives = 67/125 (53.60%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
Relationships
The following mRNA feature(s) are a part of this gene:
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