Cmc10g0277851 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc10g0277851
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Rhodanese domain-containing protein
Location	CMiso1.1chr10: 13748877 .. 13751398 (+)
RNA-Seq Expression	Cmc10g0277851
Synteny	Cmc10g0277851

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CATTAAAATAGAACGGAGAAAGAACGAAGAAGGCGACCGATTCGTCGTCCTCAGGCTCCATGCTCATCAGATATAGAGCTCCTCCATTGTTAGCTCTGGGAATGGTATCGCCATTACCTTCTTCCCCTTCTTCTTCCTTTTCTTCGAACACTAATCTCATCTCATTCAATTTCAGTCCCTCTTTCCCTGTTCCAAAACCCTCCTCTTCTTTCCCTTCGCTTCTCTCCTCTTTCTTTCACAAGCCCAGTCGGAGCATGACTCATTCCATTTGCTTTTCTGGACCTTCCCCCACCGCTCCCATTCATAGCTCATGTGAAGAATCTGAGGACATGGATTCAATTTCTCTTGTTGTTTCTTTCTATAAGTTCGCTCATTTTCCTGACCATGCGGAATTTCGCTCGCCCTTGAAGAAGCTCTGCGAGGAACTGGTACTTGTTTTTTCCTGCTTTGTGTCTTTTGATTGGTGTTTTATATGGTTTAGTTGTGTTTGGGGATTGGGGGTTTCTTGATTATGAGATTACACGATGCTTAATGGTTTTGGGGTTTCTTAAGTGGGTTATTTTTGTGAAGTGATATATTTGGAATGTTGGGTCGGTCTTTGGAGTAATGGGAGTTGGTGTTGAGATATAAGTTTACCAAATATTTGGTTGTTAGATTAGTTAAGAGCAAACCTGTTGGATAGCTCTAACTTCTGAAGATAGTAATTACTAATGAGTAAAAGTTTCAAATTTTCAACATAATGTGCTGTGCATGTAGTTGCCTTCCCATTTCTTTGAAACAAGGGCATCTTTGAACGAATTAGAAAGAAATTTTGCATGTCATAGAAATCTCCTCCCTTTCTGATTAGGAACCTAACCTACATTGTTCTGGAAGAGCTCAAAAGGCTTATAGTAAAAGAGACACGTGAATCAAATATGTTTGAGTTCCTCTAATTCATCTTTACACAGCAGAAGGAACCAACGAAATGACTGGTCAAGCATTTGGAAGGAAGAGGTATAAAGTTAGGGAATGATTCATACTCGATCCTTCCTAAAGAAACAATCCAAGAGAAGACTCTGGCATGCTTTGGGATCTTAAACTTCCATAGGTTTGAATAAAAATGGATGGGATTTGGGGATGAGGAAGGAAAGAGTAAAATCTCAAGCAGCAGAAGTAAAAAGTTTATTGAAAAAAACACTTGCCCAAATCTTCTTCAGAAAAAGAAATAAGACGTACATGATCCTACGCAAGGAAATTGCATGGCCACTACGCAAGGATGACTTGCACAAAAAAGAAAAAGAAATGAGACTTGCACAAAAATACTCGAGAAGGATTTAGTGAAAGACAGTGATAACGTAAACCCAGACAAAGACTCGAGTTAAATCAATGACAATAGGGAAGTTCACCTCTTTATTGGAAAGGGAAGAGCTTTTATTTATTTATTTATCAGAACGAATTTTTTTGGGCATTCGACAGGAAGTCCTTAAGGAAGGGACTCCAGGAGAAAGCTCCCTATAGCAATAAAGTAAAAGAGAACCCTTCCAAGCAGTAAAAAGCAGAGGCTTTATATACTTCCTTGACAAGGACTGGGTTACAGTTTGGGAATACCAAACGAAAGTGATTACCATCAATCCAGTGGTTGTCCGAACCCAGACTTCAAAATTGGTTTGTTTTTTATTGTTTAGGAAGTAGATAATCAACTATTTCTTATCTGAAAAAGATCAGCAAATATTATAAAATTTATTTGATTGTCATTCTTTAGCAAGAACATATAGATATTAGCTGGATATATTTAACATATGCCAGTAAGAACTCGAAGTAATTTACAACATATAGAACTCTTTTTATTTCATGTAGTTGAAAGATGAACTTGAGTTTTTATCCTGCAGTATAAAGAATGAAGTGAATACAAGTTAACCATTAATACTAACAGAACTGGATATGGAAAAATTTTCTGACTTCATCTGTTATTATAAATTTATACCTCATTTTGCTGCCCGGTTTGGATTAGCGTTACTAAGCTAATCTTGCTCAGCGTGTTTCAGGAGGTATCATTCTCGCACCTGAAGGAATTAATGGGAGCATATGTGGATCTCGGGAGTCTGTCCAAAGGGTTCTTGGATTCATTGAAAGTGATGAACGGCTAAAACGACTAAGGCAGGTGGAAACGTCTGTTAGTCCTGAAGAAGAAGCCATCCACAACGGTCATACTAGCAGTTCCCCTCTTGCAGCGGGTGAAGATGCACCCTTTCGTTAGGACCATGTCAGGGTCAAATTAAAGAAAGAGGTACTAAAATTTTAATTTATTTTCTTTATTCTTAAGGATGTAGGAATTGGGATGGAGGCAGATGTAGAATATAAGGGTCGGGTAGGTGTTCTTATTTGTTGATTCTTATTTATTCATTGATGCTTTTGTCCCAATGCGGTGTTTGTTTTTGCAGATTGTCACTCTTGGAATGCCTGTTATTATATCACCTGTTGAAAGGGTTGGACAATATGTGAAACCAAGGGATTAGAATTCACTGATAAGCGATCCAGATACT

mRNA sequence

CATTAAAATAGAACGGAGAAAGAACGAAGAAGGCGACCGATTCGTCGTCCTCAGGCTCCATGCTCATCAGATATAGAGCTCCTCCATTGTTAGCTCTGGGAATGGTATCGCCATTACCTTCTTCCCCTTCTTCTTCCTTTTCTTCGAACACTAATCTCATCTCATTCAATTTCAGTCCCTCTTTCCCTGTTCCAAAACCCTCCTCTTCTTTCCCTTCGCTTCTCTCCTCTTTCTTTCACAAGCCCAGTCGGAGCATGACTCATTCCATTTGCTTTTCTGGACCTTCCCCCACCGCTCCCATTCATAGCTCATGTGAAGAATCTGAGGACATGGATTCAATTTCTCTTGTTGTTTCTTTCTATAAGTTCGCTCATTTTCCTGACCATGCGGAATTTCGCTCGCCCTTGAAGAAGCTCTGCGAGGAACTGTTGTGTATCATTCTCGCACCTGAAGGAATTAATGGGAGCATATGTGGATCTCGGGAGTCTGTCCAAAGGGTTCTTGGATTCATTGAAAGTGATGAACGGCTAAAACGACTAAGGCAGGTGGAAACGTCTGTTAGTCCTGAAGAAGAAGCCATCCACAACGGTCATACTAGCAGTTCCCCTCTTGCAGCGGGTGAAGATGCACCCTTTCGTTAGGACCATGTCAGGGTCAAATTAAAGAAAGAGATTGTCACTCTTGGAATGCCTGTTATTATATCACCTGTTGAAAGGGTTGGACAATATGTGAAACCAAGGGATTAGAATTCACTGATAAGCGATCCAGATACT

Coding sequence (CDS)

ATGCTCATCAGATATAGAGCTCCTCCATTGTTAGCTCTGGGAATGGTATCGCCATTACCTTCTTCCCCTTCTTCTTCCTTTTCTTCGAACACTAATCTCATCTCATTCAATTTCAGTCCCTCTTTCCCTGTTCCAAAACCCTCCTCTTCTTTCCCTTCGCTTCTCTCCTCTTTCTTTCACAAGCCCAGTCGGAGCATGACTCATTCCATTTGCTTTTCTGGACCTTCCCCCACCGCTCCCATTCATAGCTCATGTGAAGAATCTGAGGACATGGATTCAATTTCTCTTGTTGTTTCTTTCTATAAGTTCGCTCATTTTCCTGACCATGCGGAATTTCGCTCGCCCTTGAAGAAGCTCTGCGAGGAACTGTTGTGTATCATTCTCGCACCTGAAGGAATTAATGGGAGCATATGTGGATCTCGGGAGTCTGTCCAAAGGGTTCTTGGATTCATTGAAAGTGATGAACGGCTAAAACGACTAAGGCAGGTGGAAACGTCTGTTAGTCCTGAAGAAGAAGCCATCCACAACGGTCATACTAGCAGTTCCCCTCTTGCAGCGGGTGAAGATGCACCCTTTCGTTAG

Protein sequence

MLIRYRAPPLLALGMVSPLPSSPSSSFSSNTNLISFNFSPSFPVPKPSSSFPSLLSSFFHKPSRSMTHSICFSGPSPTAPIHSSCEESEDMDSISLVVSFYKFAHFPDHAEFRSPLKKLCEELLCIILAPEGINGSICGSRESVQRVLGFIESDERLKRLRQVETSVSPEEEAIHNGHTSSSPLAAGEDAPFR

Homology

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BLAST of Cmc10g0277851 vs. NCBI nr
Match: XP_016902023.1 (PREDICTED: LOW QUALITY PROTEIN: rhodanese-like domain-containing protein 7 [Cucumis melo])

HSP 1 Score: 354.0 bits (907), Expect = 8.3e-94
Identity = 188/197 (95.43%), Postives = 188/197 (95.43%), Query Frame = 0


Query: 1   MLIRYRAPPLLALGMVSPLPSSPSSSFSSNTNLISFNFSPSFPVPKPSSSFPSLLSSFFH 60
           MLIRYRAPPLLALGMVSPLPSS SSSFSSNTNLISFNFSPSFPVPKPSSSFPSLLSSF H
Sbjct: 1   MLIRYRAPPLLALGMVSPLPSSSSSSFSSNTNLISFNFSPSFPVPKPSSSFPSLLSSFVH 60

Query: 61  KPSRSMTHSICFSGPSPTAPIHSSCEESEDMDSISL-VVSFYKFAHFPDHAEFRSPLKKL 120
           KPSRSMTHSICFSGPSPTAPIHSSCEESEDMDSISL VVSFYKFAHFPDHAEFRSPLKKL
Sbjct: 61  KPSRSMTHSICFSGPSPTAPIHSSCEESEDMDSISLVVVSFYKFAHFPDHAEFRSPLKKL 120

Query: 121 CEELLC---IILAPEGINGSICGSRESVQRVLGFIESDERLKRLRQVETSVSPEEEAIHN 180
           CEEL     IILAPEGINGSICGSRESVQRVLGFIESDERLK LRQVETSVSPEEEAIHN
Sbjct: 121 CEELRVLGGIILAPEGINGSICGSRESVQRVLGFIESDERLKGLRQVETSVSPEEEAIHN 180

Query: 181 GHTSSSPLAAGEDAPFR 194
           GHTSSSPLAAGEDAPFR
Sbjct: 181 GHTSSSPLAAGEDAPFR 197

[Close]

BLAST of Cmc10g0277851 vs. NCBI nr
Match: XP_004146431.2 (rhodanese-like domain-containing protein 7 [Cucumis sativus])

HSP 1 Score: 313.9 bits (803), Expect = 9.5e-82
Identity = 169/203 (83.25%), Postives = 177/203 (87.19%), Query Frame = 0


Query: 1   MLIRYRAPPLLALGMVSPLPSSPS------SSFSSNTNLISFNFSPSFPVPKPSSSFPSL 60
           MLIRYRAPPL  LGMVSP PSS S      SSFSSN+NLISFNFSPSFP+P+P  SFPSL
Sbjct: 1   MLIRYRAPPLFPLGMVSPFPSSSSSSFSSLSSFSSNSNLISFNFSPSFPIPRPFLSFPSL 60

Query: 61  LSSFFHKPSRSMTHSICFSGPSPTAPIHSSCEESEDMDSISL-VVSFYKFAHFPDHAEFR 120
           LS+F HKP RSMTHS+CFSGPSPTAPIHSS EESED++S SL VVSFYKFA FPDHAEFR
Sbjct: 61  LSAFLHKPCRSMTHSVCFSGPSPTAPIHSSSEESEDVESASLVVVSFYKFADFPDHAEFR 120

Query: 121 SPLKKLCEELLC---IILAPEGINGSICGSRESVQRVLGFIESDERLKRLRQVETSVSPE 180
            PLKKLCEEL     IILAPEGINGSICGSRESVQRVLGFI+SDERLK LRQVET VSPE
Sbjct: 121 LPLKKLCEELRVSGGIILAPEGINGSICGSRESVQRVLGFIQSDERLKGLRQVETPVSPE 180

Query: 181 EEAIHNGHTSSSPLAAGEDAPFR 194
           EEAIHNGHTSSSPLAAGEDAPFR
Sbjct: 181 EEAIHNGHTSSSPLAAGEDAPFR 203

[Close]

BLAST of Cmc10g0277851 vs. NCBI nr
Match: KAG7031505.1 (Rhodanese-like domain-containing protein 7, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 280.8 bits (717), Expect = 8.9e-72
Identity = 156/199 (78.39%), Postives = 171/199 (85.93%), Query Frame = 0


Query: 2   LIRYRAPPLLALGMVSPL---PSSPSSSFSSNTNLISFNFSPSFPVPKPSSSFPSLLSSF 61
           ++RYRAPPLLALGMVSPL    SS SSSFSSN NLI+FN  PSFPV KPS + PSLLSSF
Sbjct: 1   MLRYRAPPLLALGMVSPLLSSSSSSSSSFSSNPNLITFN--PSFPVLKPSPTLPSLLSSF 60

Query: 62  FHKPSRSMTHSICFSGPSPTAPIHSSCEESEDMDSISL-VVSFYKFAHFPDHAEFRSPLK 121
             KP+RSMTHS CFSGPSP  PI ++C E++++DS+SL VVSFYKFA FPDHAEFRSPLK
Sbjct: 61  HQKPTRSMTHSKCFSGPSPAVPIPTAC-EAQEVDSVSLVVVSFYKFADFPDHAEFRSPLK 120

Query: 122 KLCEELLC---IILAPEGINGSICGSRESVQRVLGFIESDERLKRLRQVETSVSPEEEAI 181
           KLC+EL     IILAPEGINGSICGSRESVQRVLGFIESDERLK LRQVET VSPEEEAI
Sbjct: 121 KLCQELRVSGGIILAPEGINGSICGSRESVQRVLGFIESDERLKGLRQVETPVSPEEEAI 180

Query: 182 HNGHTSSSPLAAGEDAPFR 194
           H+GH+S SPLAAGEDAPFR
Sbjct: 181 HHGHSSGSPLAAGEDAPFR 196

[Close]

BLAST of Cmc10g0277851 vs. NCBI nr
Match: XP_022942932.1 (rhodanese-like domain-containing protein 7 [Cucurbita moschata])

HSP 1 Score: 276.9 bits (707), Expect = 1.3e-70
Identity = 155/199 (77.89%), Postives = 170/199 (85.43%), Query Frame = 0


Query: 2   LIRYRAPPLLALGMVSPL---PSSPSSSFSSNTNLISFNFSPSFPVPKPSSSFPSLLSSF 61
           ++RYRAPPLLALGMVSPL    SS SSSFSSN NLI+FN  PSF V KPS + PSLLSSF
Sbjct: 1   MLRYRAPPLLALGMVSPLLTSSSSSSSSFSSNPNLITFN--PSFLVLKPSPTLPSLLSSF 60

Query: 62  FHKPSRSMTHSICFSGPSPTAPIHSSCEESEDMDSISL-VVSFYKFAHFPDHAEFRSPLK 121
             KP+RSMTHS CFSGPSP  PI ++C E++++DS+SL VVSFYKFA FPDHAEFRSPLK
Sbjct: 61  HQKPTRSMTHSKCFSGPSPAVPIPTAC-EAQEVDSVSLVVVSFYKFADFPDHAEFRSPLK 120

Query: 122 KLCEELLC---IILAPEGINGSICGSRESVQRVLGFIESDERLKRLRQVETSVSPEEEAI 181
           KLC+EL     IILAPEGINGSICGSRESVQRVLGFIESDERLK LRQVET VSPEEEAI
Sbjct: 121 KLCQELRVSGGIILAPEGINGSICGSRESVQRVLGFIESDERLKGLRQVETPVSPEEEAI 180

Query: 182 HNGHTSSSPLAAGEDAPFR 194
           H+GH+S SPLAAGEDAPFR
Sbjct: 181 HHGHSSGSPLAAGEDAPFR 196

[Close]

BLAST of Cmc10g0277851 vs. NCBI nr
Match: KAG6600870.1 (Rhodanese-like domain-containing protein 7, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 276.6 bits (706), Expect = 1.7e-70
Identity = 155/200 (77.50%), Postives = 170/200 (85.00%), Query Frame = 0


Query: 2   LIRYRAPPLLALGMVSPL----PSSPSSSFSSNTNLISFNFSPSFPVPKPSSSFPSLLSS 61
           ++RYRAPPLLALGMVSPL     SS SSSFSSN NLI+FN  PSF V KPS + PSLLSS
Sbjct: 1   MLRYRAPPLLALGMVSPLLTSSSSSSSSSFSSNPNLITFN--PSFLVLKPSPTLPSLLSS 60

Query: 62  FFHKPSRSMTHSICFSGPSPTAPIHSSCEESEDMDSISL-VVSFYKFAHFPDHAEFRSPL 121
           F  KP+RSMTHS CFSGPSP  PI ++C E++++DS+SL VVSFYKFA FPDHAEFRSPL
Sbjct: 61  FHQKPTRSMTHSKCFSGPSPAVPIPTAC-EAQEVDSVSLVVVSFYKFADFPDHAEFRSPL 120

Query: 122 KKLCEELLC---IILAPEGINGSICGSRESVQRVLGFIESDERLKRLRQVETSVSPEEEA 181
           KKLC+EL     IILAPEGINGSICGSRESVQRVLGFIESDERLK LRQVET VSPEEEA
Sbjct: 121 KKLCQELRVSGGIILAPEGINGSICGSRESVQRVLGFIESDERLKGLRQVETPVSPEEEA 180

Query: 182 IHNGHTSSSPLAAGEDAPFR 194
           IH+GH+S SPLAAGEDAPFR
Sbjct: 181 IHHGHSSGSPLAAGEDAPFR 197

[Close]

BLAST of Cmc10g0277851 vs. ExPASy Swiss-Prot
Match: Q1JPN0 (Rhodanese-like domain-containing protein 7 OS=Arabidopsis thaliana OX=3702 GN=STR7 PE=2 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 1.1e-37
Identity = 108/205 (52.68%), Postives = 127/205 (61.95%), Query Frame = 0


Query: 5   YRAPPLLAL--GMVSPLPSSPSSSFSS---NTNLISFNFSPSFPVPKPSSSFPSLLSSFF 64
           +R PP LA+   + SP P    S FS    N+N +  N  P    P+   S P  LSS  
Sbjct: 7   WRFPPSLAVVRMLSSPPPPHSHSPFSGGGVNSNSVGGNSKPELQFPQ---SQPHKLSS-- 66

Query: 65  HKPSRSMTHSICFSGP-------SPTAPIHSSCEESEDMDSISL-VVSFYKFAHFPDHAE 124
             PS S+  ++  S         +  +   S   ES D D  SL VVSFYKFA FP+HA+
Sbjct: 67  -SPSSSLKSTVACSNAGAIRRSMATVSQAFSERTESIDSDLGSLVVVSFYKFADFPEHAD 126

Query: 125 FRSPLKKLCEELLC---IILAPEGINGSICGSRESVQRVLGFIESDERLKRLRQVETSVS 184
           FR PLK LCE+L     IILAPEGINGSICG RESV+ VL FI+ D RL  LRQVET VS
Sbjct: 127 FRKPLKDLCEKLRVSGGIILAPEGINGSICGIRESVEEVLAFIQRDVRLNGLRQVETPVS 186

Query: 185 PEEEAIHNGHTSSSPLAAGEDAPFR 194
           PE+EAIH+GH+SSSPLAAGEDAPFR
Sbjct: 187 PEQEAIHHGHSSSSPLAAGEDAPFR 205

[Close]

BLAST of Cmc10g0277851 vs. ExPASy Swiss-Prot
Match: Q8YZS3 (tRNA uridine(34) hydroxylase OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=trhO PE=3 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.1e-08
Identity = 33/80 (41.25%), Postives = 47/80 (58.75%), Query Frame = 0


Query: 90  DMDSISLVVSFYKFAHFPDHAEFRSPLKKLC---EELLCIILAPEGINGSICGSRESVQR 149
           + ++  +V +FYKF   PD AE + PL   C        I+LA EGING+I GSR S+  
Sbjct: 2   NQENTQIVAAFYKFVSLPDFAEKQEPLLAYCLAQNIKGTILLAKEGINGTIAGSRLSIDN 61

Query: 150 VLGFIESDERLKRLRQVETS 167
           VL ++ SD RL+ L   E++
Sbjct: 62  VLSYLRSDLRLQDLEHKEST 81

[Close]

BLAST of Cmc10g0277851 vs. ExPASy Swiss-Prot
Match: B2IVX7 (tRNA uridine(34) hydroxylase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) OX=63737 GN=trhO PE=3 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.5e-08
Identity = 32/77 (41.56%), Postives = 45/77 (58.44%), Query Frame = 0


Query: 92  DSISLVVSFYKFAHFPDHAEFRSPLKKLCEE---LLCIILAPEGINGSICGSRESVQRVL 151
           ++  +V + YKF   PD A+ R PL   C+       I+LA EGING+I GSR+++  VL
Sbjct: 4   ENTQIVAALYKFVKLPDFAQKRDPLLSYCQAQGVKGTILLAQEGINGTIAGSRQAIDSVL 63

Query: 152 GFIESDERLKRLRQVET 166
            F+ SD RL  L   E+
Sbjct: 64  WFLRSDPRLADLEYKES 80

[Close]

BLAST of Cmc10g0277851 vs. ExPASy Swiss-Prot
Match: Q3M998 (tRNA uridine(34) hydroxylase OS=Trichormus variabilis (strain ATCC 29413 / PCC 7937) OX=240292 GN=trhO PE=3 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 7.2e-08
Identity = 31/80 (38.75%), Postives = 47/80 (58.75%), Query Frame = 0


Query: 90  DMDSISLVVSFYKFAHFPDHAEFRSPLKKLC---EELLCIILAPEGINGSICGSRESVQR 149
           + ++  +V +FYKF   PD  E + PL   C   +    I+LA EGING+I GSR S+  
Sbjct: 2   NQENTQIVAAFYKFVSLPDFTEKQVPLLAYCLAQDIKGTILLAKEGINGTIAGSRLSIDN 61

Query: 150 VLGFIESDERLKRLRQVETS 167
           VL ++ +D RL+ L   E++
Sbjct: 62  VLSYLRADLRLQDLEHKEST 81

[Close]

BLAST of Cmc10g0277851 vs. ExPASy Swiss-Prot
Match: Q5QYN9 (tRNA uridine(34) hydroxylase OS=Idiomarina loihiensis (strain ATCC BAA-735 / DSM 15497 / L2-TR) OX=283942 GN=trhO PE=3 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 3.6e-07
Identity = 30/80 (37.50%), Postives = 45/80 (56.25%), Query Frame = 0


Query: 96  LVVSFYKFAHFPDHAEFRSPLKKLC---EELLCIILAPEGINGSICGSRESVQRVLGFIE 155
           +  + YKF    D+ E R PL +     +    ++LA EGING+ICG+RE++  VL ++ 
Sbjct: 3   ICAALYKFVELNDYKELREPLYQTLIANDVKGTLLLAREGINGTICGTREAIDNVLNYLR 62

Query: 156 SDERLKRLRQVETSVSPEEE 173
           SDE   R   +E   SP +E
Sbjct: 63  SDE---RFADIEHKESPSDE 79

[Close]

BLAST of Cmc10g0277851 vs. ExPASy TrEMBL
Match: A0A1S4E1C5 (LOW QUALITY PROTEIN: rhodanese-like domain-containing protein 7 OS=Cucumis melo OX=3656 GN=LOC103496761 PE=3 SV=1)

HSP 1 Score: 354.0 bits (907), Expect = 4.0e-94
Identity = 188/197 (95.43%), Postives = 188/197 (95.43%), Query Frame = 0


Query: 1   MLIRYRAPPLLALGMVSPLPSSPSSSFSSNTNLISFNFSPSFPVPKPSSSFPSLLSSFFH 60
           MLIRYRAPPLLALGMVSPLPSS SSSFSSNTNLISFNFSPSFPVPKPSSSFPSLLSSF H
Sbjct: 1   MLIRYRAPPLLALGMVSPLPSSSSSSFSSNTNLISFNFSPSFPVPKPSSSFPSLLSSFVH 60

Query: 61  KPSRSMTHSICFSGPSPTAPIHSSCEESEDMDSISL-VVSFYKFAHFPDHAEFRSPLKKL 120
           KPSRSMTHSICFSGPSPTAPIHSSCEESEDMDSISL VVSFYKFAHFPDHAEFRSPLKKL
Sbjct: 61  KPSRSMTHSICFSGPSPTAPIHSSCEESEDMDSISLVVVSFYKFAHFPDHAEFRSPLKKL 120

Query: 121 CEELLC---IILAPEGINGSICGSRESVQRVLGFIESDERLKRLRQVETSVSPEEEAIHN 180
           CEEL     IILAPEGINGSICGSRESVQRVLGFIESDERLK LRQVETSVSPEEEAIHN
Sbjct: 121 CEELRVLGGIILAPEGINGSICGSRESVQRVLGFIESDERLKGLRQVETSVSPEEEAIHN 180

Query: 181 GHTSSSPLAAGEDAPFR 194
           GHTSSSPLAAGEDAPFR
Sbjct: 181 GHTSSSPLAAGEDAPFR 197

[Close]

BLAST of Cmc10g0277851 vs. ExPASy TrEMBL
Match: A0A0A0KM63 (Rhodanese domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G223080 PE=3 SV=1)

HSP 1 Score: 313.9 bits (803), Expect = 4.6e-82
Identity = 169/203 (83.25%), Postives = 177/203 (87.19%), Query Frame = 0


Query: 1   MLIRYRAPPLLALGMVSPLPSSPS------SSFSSNTNLISFNFSPSFPVPKPSSSFPSL 60
           MLIRYRAPPL  LGMVSP PSS S      SSFSSN+NLISFNFSPSFP+P+P  SFPSL
Sbjct: 1   MLIRYRAPPLFPLGMVSPFPSSSSSSFSSLSSFSSNSNLISFNFSPSFPIPRPFLSFPSL 60

Query: 61  LSSFFHKPSRSMTHSICFSGPSPTAPIHSSCEESEDMDSISL-VVSFYKFAHFPDHAEFR 120
           LS+F HKP RSMTHS+CFSGPSPTAPIHSS EESED++S SL VVSFYKFA FPDHAEFR
Sbjct: 61  LSAFLHKPCRSMTHSVCFSGPSPTAPIHSSSEESEDVESASLVVVSFYKFADFPDHAEFR 120

Query: 121 SPLKKLCEELLC---IILAPEGINGSICGSRESVQRVLGFIESDERLKRLRQVETSVSPE 180
            PLKKLCEEL     IILAPEGINGSICGSRESVQRVLGFI+SDERLK LRQVET VSPE
Sbjct: 121 LPLKKLCEELRVSGGIILAPEGINGSICGSRESVQRVLGFIQSDERLKGLRQVETPVSPE 180

Query: 181 EEAIHNGHTSSSPLAAGEDAPFR 194
           EEAIHNGHTSSSPLAAGEDAPFR
Sbjct: 181 EEAIHNGHTSSSPLAAGEDAPFR 203

[Close]

BLAST of Cmc10g0277851 vs. ExPASy TrEMBL
Match: A0A6J1FRM3 (rhodanese-like domain-containing protein 7 OS=Cucurbita moschata OX=3662 GN=LOC111447816 PE=3 SV=1)

HSP 1 Score: 276.9 bits (707), Expect = 6.2e-71
Identity = 155/199 (77.89%), Postives = 170/199 (85.43%), Query Frame = 0


Query: 2   LIRYRAPPLLALGMVSPL---PSSPSSSFSSNTNLISFNFSPSFPVPKPSSSFPSLLSSF 61
           ++RYRAPPLLALGMVSPL    SS SSSFSSN NLI+FN  PSF V KPS + PSLLSSF
Sbjct: 1   MLRYRAPPLLALGMVSPLLTSSSSSSSSFSSNPNLITFN--PSFLVLKPSPTLPSLLSSF 60

Query: 62  FHKPSRSMTHSICFSGPSPTAPIHSSCEESEDMDSISL-VVSFYKFAHFPDHAEFRSPLK 121
             KP+RSMTHS CFSGPSP  PI ++C E++++DS+SL VVSFYKFA FPDHAEFRSPLK
Sbjct: 61  HQKPTRSMTHSKCFSGPSPAVPIPTAC-EAQEVDSVSLVVVSFYKFADFPDHAEFRSPLK 120

Query: 122 KLCEELLC---IILAPEGINGSICGSRESVQRVLGFIESDERLKRLRQVETSVSPEEEAI 181
           KLC+EL     IILAPEGINGSICGSRESVQRVLGFIESDERLK LRQVET VSPEEEAI
Sbjct: 121 KLCQELRVSGGIILAPEGINGSICGSRESVQRVLGFIESDERLKGLRQVETPVSPEEEAI 180

Query: 182 HNGHTSSSPLAAGEDAPFR 194
           H+GH+S SPLAAGEDAPFR
Sbjct: 181 HHGHSSGSPLAAGEDAPFR 196

[Close]

BLAST of Cmc10g0277851 vs. ExPASy TrEMBL
Match: A0A6J1JDN9 (rhodanese-like domain-containing protein 7 OS=Cucurbita maxima OX=3661 GN=LOC111485926 PE=3 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 1.0e-65
Identity = 148/185 (80.00%), Postives = 157/185 (84.86%), Query Frame = 0


Query: 15  MVSPLPSSPS--SSFSSNTNLISFNFSPSFPVPKPSSSFPSLLSSFFHKPSRSMTHSICF 74
           MVSPL SS S  SSFSSN NLI+FN  PSFP+ KPS + PSLLSSF  KPSRSMTHS CF
Sbjct: 1   MVSPLLSSSSSYSSFSSNPNLITFN--PSFPILKPSPTLPSLLSSFHQKPSRSMTHSKCF 60

Query: 75  SGPSPTAPIHSSCEESEDMDSISL-VVSFYKFAHFPDHAEFRSPLKKLCEELLC---IIL 134
           SGPSP  PI S+CE  E +DS+SL VVSFYKFA FPDHAEFRSPLKKLC+EL     IIL
Sbjct: 61  SGPSPAVPIPSACEVQE-VDSMSLVVVSFYKFADFPDHAEFRSPLKKLCQELRVSGGIIL 120

Query: 135 APEGINGSICGSRESVQRVLGFIESDERLKRLRQVETSVSPEEEAIHNGHTSSSPLAAGE 194
           APEGINGSICGSRESVQRVLGFIESDERLK LRQVET VSPEEEAIH+GH+SSSPLAAGE
Sbjct: 121 APEGINGSICGSRESVQRVLGFIESDERLKGLRQVETPVSPEEEAIHHGHSSSSPLAAGE 180

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BLAST of Cmc10g0277851 vs. ExPASy TrEMBL
Match: A0A6J1CYE5 (rhodanese-like domain-containing protein 7 OS=Momordica charantia OX=3673 GN=LOC111015925 PE=3 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 1.2e-58
Identity = 145/207 (70.05%), Postives = 157/207 (75.85%), Query Frame = 0


Query: 2   LIRYRAPPLLALGMVSPLP--------SSPSSSFSSNTNLISFNFSPSFPVPKPSSSFPS 61
           +IRYRA   LA+   SPLP        SS SSSFSSN N I+  FS SFPV KPS   PS
Sbjct: 47  MIRYRA---LAMVSPSPLPSSSSSSSSSSSSSSFSSNPNFIT--FSSSFPVLKPSLPLPS 106

Query: 62  LLSSF---FHKPSRSMTHSICFSGPSPTAPIHSSCEESEDMDSISL-VVSFYKFAHFPDH 121
           LLSSF     K +RSMT+S CFSG +   PI S+C  +E+ DS+SL VVSFYKFA FPDH
Sbjct: 107 LLSSFLSALRKHTRSMTYSRCFSGSTTAVPIPSAC-HAEETDSVSLVVVSFYKFADFPDH 166

Query: 122 AEFRSPLKKLCEELLC---IILAPEGINGSICGSRESVQRVLGFIESDERLKRLRQVETS 181
           A+FR PLKKLCEEL     IILAPEGINGSICGSRESVQRVLGFIESDERLK LRQVET 
Sbjct: 167 AQFRQPLKKLCEELRVSGGIILAPEGINGSICGSRESVQRVLGFIESDERLKGLRQVETP 226

Query: 182 VSPEEEAIHNGHTSSSPLAAGEDAPFR 194
           VSPEEEAIH+GH SSSPLAAGEDAPFR
Sbjct: 227 VSPEEEAIHHGHISSSPLAAGEDAPFR 247

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BLAST of Cmc10g0277851 vs. TAIR 10
Match: AT2G40760.1 (Rhodanese/Cell cycle control phosphatase superfamily protein )

HSP 1 Score: 157.9 bits (398), Expect = 8.1e-39
Identity = 108/205 (52.68%), Postives = 127/205 (61.95%), Query Frame = 0


Query: 5   YRAPPLLAL--GMVSPLPSSPSSSFSS---NTNLISFNFSPSFPVPKPSSSFPSLLSSFF 64
           +R PP LA+   + SP P    S FS    N+N +  N  P    P+   S P  LSS  
Sbjct: 7   WRFPPSLAVVRMLSSPPPPHSHSPFSGGGVNSNSVGGNSKPELQFPQ---SQPHKLSS-- 66

Query: 65  HKPSRSMTHSICFSGP-------SPTAPIHSSCEESEDMDSISL-VVSFYKFAHFPDHAE 124
             PS S+  ++  S         +  +   S   ES D D  SL VVSFYKFA FP+HA+
Sbjct: 67  -SPSSSLKSTVACSNAGAIRRSMATVSQAFSERTESIDSDLGSLVVVSFYKFADFPEHAD 126

Query: 125 FRSPLKKLCEELLC---IILAPEGINGSICGSRESVQRVLGFIESDERLKRLRQVETSVS 184
           FR PLK LCE+L     IILAPEGINGSICG RESV+ VL FI+ D RL  LRQVET VS
Sbjct: 127 FRKPLKDLCEKLRVSGGIILAPEGINGSICGIRESVEEVLAFIQRDVRLNGLRQVETPVS 186

Query: 185 PEEEAIHNGHTSSSPLAAGEDAPFR 194
           PE+EAIH+GH+SSSPLAAGEDAPFR
Sbjct: 187 PEQEAIHHGHSSSSPLAAGEDAPFR 205

The following BLAST results are available for this feature:

BLAST of Cmc10g0277851 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016902023.1	8.3e-94	95.43	PREDICTED: LOW QUALITY PROTEIN: rhodanese-like domain-containing protein 7 [Cucu...	[more]
XP_004146431.2	9.5e-82	83.25	rhodanese-like domain-containing protein 7 [Cucumis sativus]	[more]
KAG7031505.1	8.9e-72	78.39	Rhodanese-like domain-containing protein 7, partial [Cucurbita argyrosperma subs...	[more]
XP_022942932.1	1.3e-70	77.89	rhodanese-like domain-containing protein 7 [Cucurbita moschata]	[more]
KAG6600870.1	1.7e-70	77.50	Rhodanese-like domain-containing protein 7, partial [Cucurbita argyrosperma subs...	[more]

BLAST of Cmc10g0277851 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q1JPN0	1.1e-37	52.68	Rhodanese-like domain-containing protein 7 OS=Arabidopsis thaliana OX=3702 GN=ST...	[more]
Q8YZS3	1.1e-08	41.25	tRNA uridine(34) hydroxylase OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2...	[more]
B2IVX7	1.5e-08	41.56	tRNA uridine(34) hydroxylase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 7310...	[more]
Q3M998	7.2e-08	38.75	tRNA uridine(34) hydroxylase OS=Trichormus variabilis (strain ATCC 29413 / PCC 7...	[more]
Q5QYN9	3.6e-07	37.50	tRNA uridine(34) hydroxylase OS=Idiomarina loihiensis (strain ATCC BAA-735 / DSM...	[more]

BLAST of Cmc10g0277851 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4E1C5	4.0e-94	95.43	LOW QUALITY PROTEIN: rhodanese-like domain-containing protein 7 OS=Cucumis melo ...	[more]
A0A0A0KM63	4.6e-82	83.25	Rhodanese domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G223080 P...	[more]
A0A6J1FRM3	6.2e-71	77.89	rhodanese-like domain-containing protein 7 OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1JDN9	1.0e-65	80.00	rhodanese-like domain-containing protein 7 OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A6J1CYE5	1.2e-58	70.05	rhodanese-like domain-containing protein 7 OS=Momordica charantia OX=3673 GN=LOC...	[more]

BLAST of Cmc10g0277851 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G40760.1	8.1e-39	52.68	Rhodanese/Cell cycle control phosphatase superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR040503	tRNA uridine(34) hydroxylase, N-terminal	PFAM	PF17773	UPF0176_N	coord: 97..166 e-value: 1.6E-14 score: 54.0
None	No IPR available	GENE3D	3.30.70.100		coord: 82..183 e-value: 5.6E-15 score: 57.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 163..193

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc10g0277851.1	Cmc10g0277851.1	mRNA