Cmc10g0277021 (gene) Melon (Charmono) v1.1

Overview
NameCmc10g0277021
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionUnknown protein
LocationCMiso1.1chr10: 12532929 .. 12535313 (+)
RNA-Seq ExpressionCmc10g0277021
SyntenyCmc10g0277021
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TATCTATTTTATTTTTCTTTTGAAAAGTCTTTTTTCAACTTCCCCGTGTCCCTCCTCTCCTGTGCATGTCTCTAGTGGTTCCTCACTCGACCCCATGTCCCTCAATCTATCTCACGCCCCAAGCTGCCTCCGCCACATATTACAATGTAAGGTGGCAGTACTGTCCCTCCTCACATCACCGGTGAGTGCCATTGTTCTCTCTCTCTCTCTCTCTCTCTCTCAGAAAATATAATAATAATAATAATAAAAGAAAGAAAACTCTTACGTGTCAAGATGAAACATCATATCTAAGATCTCTAAATCTCTTCATCAGGTTTGACTTGTACTCATTTACTTTCATATCTTCAGCCGAATCTGGAGTAGATTTAATAACCAATATTGCCCCTGCTTTATGCAAATAACCAACAGCTTCATCTGAAACAGTATTGAAGCAGAAAATTAAATATGAAAAATGATTGTTTCAAAATGACTGTAAAACCACCTGCATTTTCGCAGTTTATAGCATATAAGGAAGCTGTAAATCATTTTTTTCTTCTTTCTTTTATTGGTAAACATGAAGCTGAACTAGCGTACCATAAATCTAGATGAGTTATTCATATTTTATATACTTGACTCCCAAGTTAATAAGACTGAAACTAGAGTTAAATTTTTTTTTTATGAGAAACTAAAGTTTAAATAATAAATTAAAGTAATATATATGTAAATTAGAAATTCGACCTGAATGTGAGATGGCATATAAAGCCTTCAAAGCTTCCTTACGTGTCCGGTCATCTTTGGCAACCTCGAGCATGTTTAACAGCTCTTGAGCGCCACCAAACTCTACTATTTTCATCCTTCTTTTATCTATAATTGCAAAGAATGAAAACTATAAACACTCAACTGGCTTTCCCTGACTATAAAAGCAGTTGAGATTCTTGAAGTTACCAATAAAAGTGCAATCAGACTTCAGTTAAAACTTGAGACAAACTGTCTTAACTGTAATTGTTTTTTAGTTAGGATTCTCATTTGCCAAATTTTGGTCAAATGCTCCAGGAAAAATGTTGAAAAAGTTTCATTAGAACTTACCGAGCAAAAGCTACAAAATGTATTTCAGTTAAAGGTCAATTCTGTAAGGTAGAAAGAGTGCGGATTCTATGATCCCTTCTTGAAAGATGCTTCCTTTATTTTCCAATACAGTATTTTACCCTTCTCGAATTTGCACTACAAAAGAGCTTCATCTTTAATTTGAAGCTCGTTATAGCTATCATTATGAGTACTTATGCTGATACCAAGCTTACTTAATCTCCATAAAAAAAAATGGTCTGAAACTATTTTTATATAGAATCCTGGGGAGAAAAATGGGATGGGTTAACAAGATCTACGGCAGAAAGAGAGCAGGCATCGCATCGTTGACCCCAGGAAAAGTTCTATCGACATATAAAAGTGTGAGACAAGTTTAACAATCAATAGTTTCAAAAGCTATAACCAATTCAGGAGAATAAAATGTGAGGAGAGGTAGAAGTACCATCAATCGAAAAGCGAGCCAATCTAGACGCTCCCATCCTCTTGAACAATGGATCCTTTACTCGCAAGAGCGTCACAGATTGCTGCAACAAGTTATCCCCTGTAAGAACAAATTTAACTCAAGACAACACCATGAAAGGTTTGAAAACCAGAAACATTTCATAGTTAAAAAAACAAAAGACAACTTAGAGACAGAATTTCTGACCCATGTATGGAAAAATCTGGTAACCCAGAAATGTCGCAGTCCCGGCAAAGATTAGTTTTAATAACCATCCTACTTTTCTTTCAGCCTCCTTCTCAATCTCTGAAATTAACTCAATCTCAGTCACGCAATAAAAAACAATGACAATAAGCATGATACTCATCTAGGTACTTTTGCTTAGCAAATATTATTTTTAAATTGAAGAGTAACTAATATCACCATATCATTATTAATAAATTATCAGAACTCTAATAAGAAGAAAAGCCACACAGTTATGGCAGCCCATTGAGCTTTTATGTCATTTTGAATTCTATTACTTGTAAGAGCCTAAGTTGAGTTTGTGAGTTGGTTATTCTCGATTCCCCTCCCCACTCAGTTACTGATGAATATTATATGTGTTTGTGAGTTTAGGGTTGCAAGATGTAAGAACCCGATCATTCATCAATATAAATGGAAGGGTAAGAAAGTCATTTCGCAGGAGAAGGGCTGGAAAGAAGAATGATGCTGGTGAGGCCCACGAATGATGAGAGAATATATATAGAATGTTTTAGGGATTGGTGAGATTAGGTTTTATCATAGAAAAGACTTGTTCTTTAGGGAGAAGCTGCCAGCCTTCTTAAAGGTGCTGGCTATTTTGGTGTGTTATTTCTTGCTGTTTTTACTTTTTATTTCCTTGTATG

mRNA sequence

TATCTATTTTATTTTTCTTTTGAAAAGTCTTTTTTCAACTTCCCCGTGTCCCTCCTCTCCTGTGCATGTCTCTAGTGGTTCCTCACTCGACCCCATGTCCCTCAATCTATCTCACGCCCCAAGCTGCCTCCGCCACATATTACAATGTAAGGTGGCAGTACTGTCCCTCCTCACATCACCGGGTTGCAAGATGTAAGAACCCGATCATTCATCAATATAAATGGAAGGGTAAGAAAGTCATTTCGCAGGAGAAGGGCTGGAAAGAAGAATGATGCTGGTGAGGCCCACGAATGATGAGAGAATATATATAGAATGTTTTAGGGATTGGTGAGATTAGGTTTTATCATAGAAAAGACTTGTTCTTTAGGGAGAAGCTGCCAGCCTTCTTAAAGGTGCTGGCTATTTTGGTGTGTTATTTCTTGCTGTTTTTACTTTTTATTTCCTTGTATG

Coding sequence (CDS)

ATGTCTCTAGTGGTTCCTCACTCGACCCCATGTCCCTCAATCTATCTCACGCCCCAAGCTGCCTCCGCCACATATTACAATGTAAGGTGGCAGTACTGTCCCTCCTCACATCACCGGGTTGCAAGATGTAAGAACCCGATCATTCATCAATATAAATGGAAGGGTAAGAAAGTCATTTCGCAGGAGAAGGGCTGGAAAGAAGAATGA

Protein sequence

MSLVVPHSTPCPSIYLTPQAASATYYNVRWQYCPSSHHRVARCKNPIIHQYKWKGKKVISQEKGWKEE
Homology
[Close]
BLAST of Cmc10g0277021 vs. NCBI nr
Match: XP_016902033.1 (PREDICTED: probable sodium-coupled neutral amino acid transporter 6 isoform X2 [Cucumis melo])

HSP 1 Score: 68.2 bits (165), Expect = 3.2e-08
Identity = 30/30 (100.00%), Postives = 30/30 (100.00%), Query Frame = 0 

Query: 39  RVARCKNPIIHQYKWKGKKVISQEKGWKEE 69
           RVARCKNPIIHQYKWKGKKVISQEKGWKEE
Sbjct: 393 RVARCKNPIIHQYKWKGKKVISQEKGWKEE 422

[Close]
BLAST of Cmc10g0277021 vs. ExPASy TrEMBL
Match: A0A1S4E1D4 (probable sodium-coupled neutral amino acid transporter 6 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103496718 PE=3 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.5e-08
Identity = 30/30 (100.00%), Postives = 30/30 (100.00%), Query Frame = 0 

Query: 39  RVARCKNPIIHQYKWKGKKVISQEKGWKEE 69
           RVARCKNPIIHQYKWKGKKVISQEKGWKEE
Sbjct: 393 RVARCKNPIIHQYKWKGKKVISQEKGWKEE 422

The following BLAST results are available for this feature:
BLAST of Cmc10g0277021 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_016902033.13.2e-08100.00PREDICTED: probable sodium-coupled neutral amino acid transporter 6 isoform X2 [... [more]
BLAST of Cmc10g0277021 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Cmc10g0277021 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S4E1D41.5e-08100.00probable sodium-coupled neutral amino acid transporter 6 isoform X2 OS=Cucumis m... [more]
BLAST of Cmc10g0277021 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc10g0277021.1Cmc10g0277021.1mRNA