Cmc10g0276731 (gene) Melon (Charmono) v1.1

Overview
NameCmc10g0276731
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionTransposon Ty3-I Gag-Pol polyprotein
LocationCMiso1.1chr10: 12008211 .. 12008813 (+)
RNA-Seq ExpressionCmc10g0276731
SyntenyCmc10g0276731
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGGATGAATTACATGGTGTAAATTTGTTTTCAAAAATTGATCTTAAAAGTGGTCATCATCAAGTTCGAATGCATGTGGGAGATGAGTGGAAAATGGCTTTCAAAATAAAATTTGGTCTTTATGAATGTATTGTTATGCCCTTTGGTATTACTAATGCACCAAGCTCTTTTATGAGGCTAATGAATTGTGTTTTGAGAGAATACATTGGAAAGTTTGTTGTTGTATACTTTGATGATATTCTTGTTTACTCAAAAAGCTTGGATGAACATATTTTGCATGTCCAGAAAATTTTGCTTAAACTTAGAGAAGAAAAGCTTTATGCCAACTTCAAAAAGTGTAGTTTATGTCTAGAACAAACCAACTTCTTAAGGTTCATCATTGGAAAGAATGGTGTTAAAGTTAGTGAAGAAAAGGTAAGAGCTATTCGAGAGTGGCCCACACCAACGAATGCCACTAAGGTGAGATCTTTTAATGGCTTGGCTAGTTTTTATAAAAAATTTATTAAGAATTTCAATAGCATAGCCTCACCTTTGAATGAACTTGTGAAAAAGAATGTGAAATTTGAATGGAAAGAAAAACAAGAGAAATGCATTCACTGA

mRNA sequence

ATGTTGGATGAATTACATGGTGTAAATTTGTTTTCAAAAATTGATCTTAAAAGTGGTCATCATCAAGTTCGAATGCATGTGGGAGATGAGTGGAAAATGGCTTTCAAAATAAAATTTGGTCTTTATGAATGTATTGTTATGCCCTTTGGTATTACTAATGCACCAAGCTCTTTTATGAGGCTAATGAATTGTGTTTTGAGAGAATACATTGGAAAGTTTGTTGTTGTATACTTTGATGATATTCTTGTTTACTCAAAAAGCTTGGATGAACATATTTTGCATGTCCAGAAAATTTTGCTTAAACTTAGAGAAGAAAAGCTTTATGCCAACTTCAAAAAGTGTAGTTTATGTCTAGAACAAACCAACTTCTTAAGGTTCATCATTGGAAAGAATGGTGTTAAAGTTAGTGAAGAAAAGGTAAGAGCTATTCGAGAGTGGCCCACACCAACGAATGCCACTAAGGTGAGATCTTTTAATGGCTTGGCTAGTTTTTATAAAAAATTTATTAAGAATTTCAATAGCATAGCCTCACCTTTGAATGAACTTGTGAAAAAGAATGTGAAATTTGAATGGAAAGAAAAACAAGAGAAATGCATTCACTGA

Coding sequence (CDS)

ATGTTGGATGAATTACATGGTGTAAATTTGTTTTCAAAAATTGATCTTAAAAGTGGTCATCATCAAGTTCGAATGCATGTGGGAGATGAGTGGAAAATGGCTTTCAAAATAAAATTTGGTCTTTATGAATGTATTGTTATGCCCTTTGGTATTACTAATGCACCAAGCTCTTTTATGAGGCTAATGAATTGTGTTTTGAGAGAATACATTGGAAAGTTTGTTGTTGTATACTTTGATGATATTCTTGTTTACTCAAAAAGCTTGGATGAACATATTTTGCATGTCCAGAAAATTTTGCTTAAACTTAGAGAAGAAAAGCTTTATGCCAACTTCAAAAAGTGTAGTTTATGTCTAGAACAAACCAACTTCTTAAGGTTCATCATTGGAAAGAATGGTGTTAAAGTTAGTGAAGAAAAGGTAAGAGCTATTCGAGAGTGGCCCACACCAACGAATGCCACTAAGGTGAGATCTTTTAATGGCTTGGCTAGTTTTTATAAAAAATTTATTAAGAATTTCAATAGCATAGCCTCACCTTTGAATGAACTTGTGAAAAAGAATGTGAAATTTGAATGGAAAGAAAAACAAGAGAAATGCATTCACTGA

Protein sequence

MLDELHGVNLFSKIDLKSGHHQVRMHVGDEWKMAFKIKFGLYECIVMPFGITNAPSSFMRLMNCVLREYIGKFVVVYFDDILVYSKSLDEHILHVQKILLKLREEKLYANFKKCSLCLEQTNFLRFIIGKNGVKVSEEKVRAIREWPTPTNATKVRSFNGLASFYKKFIKNFNSIASPLNELVKKNVKFEWKEKQEKCIH
Homology
BLAST of Cmc10g0276731 vs. NCBI nr
Match: KAA0067527.1 (Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 340.9 bits (873), Expect = 7.5e-90
Identity = 163/200 (81.50%), Postives = 185/200 (92.50%), Query Frame = 0

Query: 1   MLDELHGVNLFSKIDLKSGHHQVRMHVGDEWKMAFKIKFGLYECIVMPFGITNAPSSFMR 60
           MLDELHG NLFSKIDLKSG+HQ+RMHVGDEWK AFK KFGLYE +VMPFG+TNAPS+FMR
Sbjct: 340 MLDELHGANLFSKIDLKSGYHQIRMHVGDEWKAAFKTKFGLYEWLVMPFGLTNAPSTFMR 399

Query: 61  LMNCVLREYIGKFVVVYFDDILVYSKSLDEHILHVQKILLKLREEKLYANFKKCSLCLEQ 120
           LMN VL+EYIGKFVVVYFDDILVYSK L++HILHV+ ILLKLREEKLYANFKKCS CLEQ
Sbjct: 400 LMNHVLKEYIGKFVVVYFDDILVYSKGLNDHILHVKTILLKLREEKLYANFKKCSFCLEQ 459

Query: 121 TNFLRFIIGKNGVKVSEEKVRAIREWPTPTNATKVRSFNGLASFYKKFIKNFNSIASPLN 180
            +FL FI+GK+GVKV EEKV+AIREWPTPTNA++VRSF+GLASFY++FIK+F+SIASPL 
Sbjct: 460 IHFLGFIVGKDGVKVDEEKVKAIREWPTPTNASEVRSFHGLASFYRRFIKDFSSIASPLT 519

Query: 181 ELVKKNVKFEWKEKQEKCIH 201
           ELVKK+VKFEWKEKQE   +
Sbjct: 520 ELVKKHVKFEWKEKQENAFN 539

BLAST of Cmc10g0276731 vs. NCBI nr
Match: TYK22420.1 (Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 340.9 bits (873), Expect = 7.5e-90
Identity = 163/200 (81.50%), Postives = 185/200 (92.50%), Query Frame = 0

Query: 1   MLDELHGVNLFSKIDLKSGHHQVRMHVGDEWKMAFKIKFGLYECIVMPFGITNAPSSFMR 60
           MLDELHG NLFSKIDLKSG+HQ+RMHVGDEWK AFK KFGLYE +VMPFG+TNAPS+FMR
Sbjct: 550 MLDELHGANLFSKIDLKSGYHQIRMHVGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMR 609

Query: 61  LMNCVLREYIGKFVVVYFDDILVYSKSLDEHILHVQKILLKLREEKLYANFKKCSLCLEQ 120
           LMN VL+EYIGKFVVVYFDDILVYSK L++HILHV+ ILLKLREEKLYANFKKCS CLEQ
Sbjct: 610 LMNHVLKEYIGKFVVVYFDDILVYSKGLNDHILHVKTILLKLREEKLYANFKKCSFCLEQ 669

Query: 121 TNFLRFIIGKNGVKVSEEKVRAIREWPTPTNATKVRSFNGLASFYKKFIKNFNSIASPLN 180
            +FL FI+GK+GVKV EEKV+AIREWPTPTNA++VRSF+GLASFY++FIK+F+SIASPL 
Sbjct: 670 IHFLGFIVGKDGVKVDEEKVKAIREWPTPTNASEVRSFHGLASFYRRFIKDFSSIASPLT 729

Query: 181 ELVKKNVKFEWKEKQEKCIH 201
           ELVKK+VKFEWKEKQE   +
Sbjct: 730 ELVKKHVKFEWKEKQENAFN 749

BLAST of Cmc10g0276731 vs. NCBI nr
Match: TYK26105.1 (F15O4.13 [Cucumis melo var. makuwa])

HSP 1 Score: 340.9 bits (873), Expect = 7.5e-90
Identity = 163/200 (81.50%), Postives = 185/200 (92.50%), Query Frame = 0

Query: 1   MLDELHGVNLFSKIDLKSGHHQVRMHVGDEWKMAFKIKFGLYECIVMPFGITNAPSSFMR 60
           MLDELHG NLFSKIDLKSG+HQ+RMHVGDEWK AFK KFGLYE +VMPFG+TNAPS+FMR
Sbjct: 651 MLDELHGANLFSKIDLKSGYHQIRMHVGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMR 710

Query: 61  LMNCVLREYIGKFVVVYFDDILVYSKSLDEHILHVQKILLKLREEKLYANFKKCSLCLEQ 120
           LMN VL+EYIGKFVVVYFDDILVYSK L++HILHV+ ILLKLREEKLYANFKKCS CLEQ
Sbjct: 711 LMNHVLKEYIGKFVVVYFDDILVYSKGLNDHILHVKTILLKLREEKLYANFKKCSFCLEQ 770

Query: 121 TNFLRFIIGKNGVKVSEEKVRAIREWPTPTNATKVRSFNGLASFYKKFIKNFNSIASPLN 180
            +FL FI+GK+GVKV EEKV+AIREWPTPTNA++VRSF+GLASFY++FIK+F+SIASPL 
Sbjct: 771 IHFLGFIVGKDGVKVDEEKVKAIREWPTPTNASEVRSFHGLASFYRRFIKDFSSIASPLT 830

Query: 181 ELVKKNVKFEWKEKQEKCIH 201
           ELVKK+VKFEWKEKQE   +
Sbjct: 831 ELVKKHVKFEWKEKQENAFN 850

BLAST of Cmc10g0276731 vs. NCBI nr
Match: TYK02449.1 (F15O4.13 [Cucumis melo var. makuwa])

HSP 1 Score: 340.9 bits (873), Expect = 7.5e-90
Identity = 163/200 (81.50%), Postives = 185/200 (92.50%), Query Frame = 0

Query: 1   MLDELHGVNLFSKIDLKSGHHQVRMHVGDEWKMAFKIKFGLYECIVMPFGITNAPSSFMR 60
           MLDELHG NLFSKIDLKSG+HQ+RMHVGDEWK AFK KFGLYE +VMPFG+TNAPS+FMR
Sbjct: 651 MLDELHGANLFSKIDLKSGYHQIRMHVGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMR 710

Query: 61  LMNCVLREYIGKFVVVYFDDILVYSKSLDEHILHVQKILLKLREEKLYANFKKCSLCLEQ 120
           LMN VL+EYIGKFVVVYFDDILVYSK L++HILHV+ ILLKLREEKLYANFKKCS CLEQ
Sbjct: 711 LMNHVLKEYIGKFVVVYFDDILVYSKGLNDHILHVKTILLKLREEKLYANFKKCSFCLEQ 770

Query: 121 TNFLRFIIGKNGVKVSEEKVRAIREWPTPTNATKVRSFNGLASFYKKFIKNFNSIASPLN 180
            +FL FI+GK+GVKV EEKV+AIREWPTPTNA++VRSF+GLASFY++FIK+F+SIASPL 
Sbjct: 771 IHFLGFIVGKDGVKVDEEKVKAIREWPTPTNASEVRSFHGLASFYRRFIKDFSSIASPLT 830

Query: 181 ELVKKNVKFEWKEKQEKCIH 201
           ELVKK+VKFEWKEKQE   +
Sbjct: 831 ELVKKHVKFEWKEKQENAFN 850

BLAST of Cmc10g0276731 vs. NCBI nr
Match: TYK11702.1 (F15O4.13 [Cucumis melo var. makuwa])

HSP 1 Score: 340.9 bits (873), Expect = 7.5e-90
Identity = 163/200 (81.50%), Postives = 185/200 (92.50%), Query Frame = 0

Query: 1   MLDELHGVNLFSKIDLKSGHHQVRMHVGDEWKMAFKIKFGLYECIVMPFGITNAPSSFMR 60
           MLDELHG NLFSKIDLKSG+HQ+RMHVGDEWK AFK KFGLYE +VMPFG+TNAPS+FMR
Sbjct: 651 MLDELHGANLFSKIDLKSGYHQIRMHVGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMR 710

Query: 61  LMNCVLREYIGKFVVVYFDDILVYSKSLDEHILHVQKILLKLREEKLYANFKKCSLCLEQ 120
           LMN VL+EYIGKFVVVYFDDILVYSK L++HILHV+ ILLKLREEKLYANFKKCS CLEQ
Sbjct: 711 LMNHVLKEYIGKFVVVYFDDILVYSKGLNDHILHVKTILLKLREEKLYANFKKCSFCLEQ 770

Query: 121 TNFLRFIIGKNGVKVSEEKVRAIREWPTPTNATKVRSFNGLASFYKKFIKNFNSIASPLN 180
            +FL FI+GK+GVKV EEKV+AIREWPTPTNA++VRSF+GLASFY++FIK+F+SIASPL 
Sbjct: 771 IHFLGFIVGKDGVKVDEEKVKAIREWPTPTNASEVRSFHGLASFYRRFIKDFSSIASPLT 830

Query: 181 ELVKKNVKFEWKEKQEKCIH 201
           ELVKK+VKFEWKEKQE   +
Sbjct: 831 ELVKKHVKFEWKEKQENAFN 850

BLAST of Cmc10g0276731 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 6.9e-38
Identity = 77/190 (40.53%), Postives = 116/190 (61.05%), Query Frame = 0

Query: 1   MLDELHGVNLFSKIDLKSGHHQVRMHVGDEWKMAFKIKFGLYECIVMPFGITNAPSSFMR 60
           +L +L   N F+ IDL  G HQ+ M      K AF  K G YE + MPFG+ NAP++F R
Sbjct: 288 ILGKLGRCNYFTTIDLAKGFHQIEMDPESVSKTAFSTKHGHYEYLRMPFGLKNAPATFQR 347

Query: 61  LMNCVLREYIGKFVVVYFDDILVYSKSLDEHILHVQKILLKLREEKLYANFKKCSLCLEQ 120
            MN +LR  + K  +VY DDI+V+S SLDEH+  +  +  KL +  L     KC    ++
Sbjct: 348 CMNDILRPLLNKHCLVYLDDIIVFSTSLDEHLQSLGLVFEKLAKANLKLQLDKCEFLKQE 407

Query: 121 TNFLRFIIGKNGVKVSEEKVRAIREWPTPTNATKVRSFNGLASFYKKFIKNFNSIASPLN 180
           T FL  ++  +G+K + EK+ AI+++P PT   ++++F GL  +Y+KFI NF  IA P+ 
Sbjct: 408 TTFLGHVLTPDGIKPNPEKIEAIQKYPIPTKPKEIKAFLGLTGYYRKFIPNFADIAKPMT 467

Query: 181 ELVKKNVKFE 191
           + +KKN+K +
Sbjct: 468 KCLKKNMKID 477

BLAST of Cmc10g0276731 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 3.4e-37
Identity = 74/199 (37.19%), Postives = 119/199 (59.80%), Query Frame = 0

Query: 1   MLDELHGVNLFSKIDLKSGHHQVRMHVGDEWKMAFKIKFGLYECIVMPFGITNAPSSFMR 60
           +L ++ G  +F+K+DLKS +H +R+  GDE K+AF+   G++E +VMP+GI+ AP+ F  
Sbjct: 488 LLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQY 547

Query: 61  LMNCVLREYIGKFVVVYFDDILVYSKSLDEHILHVQKILLKLREEKLYANFKKCSLCLEQ 120
            +N +L E     VV Y DDIL++SKS  EH+ HV+ +L KL+   L  N  KC     Q
Sbjct: 548 FINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQ 607

Query: 121 TNFLRFIIGKNGVKVSEEKVRAIREWPTPTNATKVRSFNGLASFYKKFIKNFNSIASPLN 180
             F+ + I + G    +E +  + +W  P N  ++R F G  ++ +KFI   + +  PLN
Sbjct: 608 VKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLN 667

Query: 181 ELVKKNVKFEWKEKQEKCI 200
            L+KK+V+++W   Q + I
Sbjct: 668 NLLKKDVRWKWTPTQTQAI 686

BLAST of Cmc10g0276731 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 3.4e-37
Identity = 74/199 (37.19%), Postives = 119/199 (59.80%), Query Frame = 0

Query: 1   MLDELHGVNLFSKIDLKSGHHQVRMHVGDEWKMAFKIKFGLYECIVMPFGITNAPSSFMR 60
           +L ++ G  +F+K+DLKS +H +R+  GDE K+AF+   G++E +VMP+GI+ AP+ F  
Sbjct: 488 LLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQY 547

Query: 61  LMNCVLREYIGKFVVVYFDDILVYSKSLDEHILHVQKILLKLREEKLYANFKKCSLCLEQ 120
            +N +L E     VV Y DDIL++SKS  EH+ HV+ +L KL+   L  N  KC     Q
Sbjct: 548 FINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQ 607

Query: 121 TNFLRFIIGKNGVKVSEEKVRAIREWPTPTNATKVRSFNGLASFYKKFIKNFNSIASPLN 180
             F+ + I + G    +E +  + +W  P N  ++R F G  ++ +KFI   + +  PLN
Sbjct: 608 VKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLN 667

Query: 181 ELVKKNVKFEWKEKQEKCI 200
            L+KK+V+++W   Q + I
Sbjct: 668 NLLKKDVRWKWTPTQTQAI 686

BLAST of Cmc10g0276731 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 3.4e-37
Identity = 74/199 (37.19%), Postives = 119/199 (59.80%), Query Frame = 0

Query: 1   MLDELHGVNLFSKIDLKSGHHQVRMHVGDEWKMAFKIKFGLYECIVMPFGITNAPSSFMR 60
           +L ++ G  +F+K+DLKS +H +R+  GDE K+AF+   G++E +VMP+GI+ AP+ F  
Sbjct: 488 LLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQY 547

Query: 61  LMNCVLREYIGKFVVVYFDDILVYSKSLDEHILHVQKILLKLREEKLYANFKKCSLCLEQ 120
            +N +L E     VV Y DDIL++SKS  EH+ HV+ +L KL+   L  N  KC     Q
Sbjct: 548 FINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQ 607

Query: 121 TNFLRFIIGKNGVKVSEEKVRAIREWPTPTNATKVRSFNGLASFYKKFIKNFNSIASPLN 180
             F+ + I + G    +E +  + +W  P N  ++R F G  ++ +KFI   + +  PLN
Sbjct: 608 VKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLN 667

Query: 181 ELVKKNVKFEWKEKQEKCI 200
            L+KK+V+++W   Q + I
Sbjct: 668 NLLKKDVRWKWTPTQTQAI 686

BLAST of Cmc10g0276731 vs. ExPASy Swiss-Prot
Match: P0CT36 (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-3 PE=1 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 3.4e-37
Identity = 74/199 (37.19%), Postives = 119/199 (59.80%), Query Frame = 0

Query: 1   MLDELHGVNLFSKIDLKSGHHQVRMHVGDEWKMAFKIKFGLYECIVMPFGITNAPSSFMR 60
           +L ++ G  +F+K+DLKS +H +R+  GDE K+AF+   G++E +VMP+GI+ AP+ F  
Sbjct: 488 LLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQY 547

Query: 61  LMNCVLREYIGKFVVVYFDDILVYSKSLDEHILHVQKILLKLREEKLYANFKKCSLCLEQ 120
            +N +L E     VV Y DDIL++SKS  EH+ HV+ +L KL+   L  N  KC     Q
Sbjct: 548 FINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQ 607

Query: 121 TNFLRFIIGKNGVKVSEEKVRAIREWPTPTNATKVRSFNGLASFYKKFIKNFNSIASPLN 180
             F+ + I + G    +E +  + +W  P N  ++R F G  ++ +KFI   + +  PLN
Sbjct: 608 VKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLN 667

Query: 181 ELVKKNVKFEWKEKQEKCI 200
            L+KK+V+++W   Q + I
Sbjct: 668 NLLKKDVRWKWTPTQTQAI 686

BLAST of Cmc10g0276731 vs. ExPASy TrEMBL
Match: A0A5A7VK67 (Transposon Ty3-I Gag-Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold50G00500 PE=4 SV=1)

HSP 1 Score: 340.9 bits (873), Expect = 3.6e-90
Identity = 163/200 (81.50%), Postives = 185/200 (92.50%), Query Frame = 0

Query: 1   MLDELHGVNLFSKIDLKSGHHQVRMHVGDEWKMAFKIKFGLYECIVMPFGITNAPSSFMR 60
           MLDELHG NLFSKIDLKSG+HQ+RMHVGDEWK AFK KFGLYE +VMPFG+TNAPS+FMR
Sbjct: 340 MLDELHGANLFSKIDLKSGYHQIRMHVGDEWKAAFKTKFGLYEWLVMPFGLTNAPSTFMR 399

Query: 61  LMNCVLREYIGKFVVVYFDDILVYSKSLDEHILHVQKILLKLREEKLYANFKKCSLCLEQ 120
           LMN VL+EYIGKFVVVYFDDILVYSK L++HILHV+ ILLKLREEKLYANFKKCS CLEQ
Sbjct: 400 LMNHVLKEYIGKFVVVYFDDILVYSKGLNDHILHVKTILLKLREEKLYANFKKCSFCLEQ 459

Query: 121 TNFLRFIIGKNGVKVSEEKVRAIREWPTPTNATKVRSFNGLASFYKKFIKNFNSIASPLN 180
            +FL FI+GK+GVKV EEKV+AIREWPTPTNA++VRSF+GLASFY++FIK+F+SIASPL 
Sbjct: 460 IHFLGFIVGKDGVKVDEEKVKAIREWPTPTNASEVRSFHGLASFYRRFIKDFSSIASPLT 519

Query: 181 ELVKKNVKFEWKEKQEKCIH 201
           ELVKK+VKFEWKEKQE   +
Sbjct: 520 ELVKKHVKFEWKEKQENAFN 539

BLAST of Cmc10g0276731 vs. ExPASy TrEMBL
Match: A0A5D3DRJ1 (F15O4.13 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold111G00130 PE=4 SV=1)

HSP 1 Score: 340.9 bits (873), Expect = 3.6e-90
Identity = 163/200 (81.50%), Postives = 185/200 (92.50%), Query Frame = 0

Query: 1   MLDELHGVNLFSKIDLKSGHHQVRMHVGDEWKMAFKIKFGLYECIVMPFGITNAPSSFMR 60
           MLDELHG NLFSKIDLKSG+HQ+RMHVGDEWK AFK KFGLYE +VMPFG+TNAPS+FMR
Sbjct: 651 MLDELHGANLFSKIDLKSGYHQIRMHVGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMR 710

Query: 61  LMNCVLREYIGKFVVVYFDDILVYSKSLDEHILHVQKILLKLREEKLYANFKKCSLCLEQ 120
           LMN VL+EYIGKFVVVYFDDILVYSK L++HILHV+ ILLKLREEKLYANFKKCS CLEQ
Sbjct: 711 LMNHVLKEYIGKFVVVYFDDILVYSKGLNDHILHVKTILLKLREEKLYANFKKCSFCLEQ 770

Query: 121 TNFLRFIIGKNGVKVSEEKVRAIREWPTPTNATKVRSFNGLASFYKKFIKNFNSIASPLN 180
            +FL FI+GK+GVKV EEKV+AIREWPTPTNA++VRSF+GLASFY++FIK+F+SIASPL 
Sbjct: 771 IHFLGFIVGKDGVKVDEEKVKAIREWPTPTNASEVRSFHGLASFYRRFIKDFSSIASPLT 830

Query: 181 ELVKKNVKFEWKEKQEKCIH 201
           ELVKK+VKFEWKEKQE   +
Sbjct: 831 ELVKKHVKFEWKEKQENAFN 850

BLAST of Cmc10g0276731 vs. ExPASy TrEMBL
Match: A0A5D3C3D3 (F15O4.13 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold143G001490 PE=4 SV=1)

HSP 1 Score: 340.9 bits (873), Expect = 3.6e-90
Identity = 163/200 (81.50%), Postives = 185/200 (92.50%), Query Frame = 0

Query: 1   MLDELHGVNLFSKIDLKSGHHQVRMHVGDEWKMAFKIKFGLYECIVMPFGITNAPSSFMR 60
           MLDELHG NLFSKIDLKSG+HQ+RMHVGDEWK AFK KFGLYE +VMPFG+TNAPS+FMR
Sbjct: 651 MLDELHGANLFSKIDLKSGYHQIRMHVGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMR 710

Query: 61  LMNCVLREYIGKFVVVYFDDILVYSKSLDEHILHVQKILLKLREEKLYANFKKCSLCLEQ 120
           LMN VL+EYIGKFVVVYFDDILVYSK L++HILHV+ ILLKLREEKLYANFKKCS CLEQ
Sbjct: 711 LMNHVLKEYIGKFVVVYFDDILVYSKGLNDHILHVKTILLKLREEKLYANFKKCSFCLEQ 770

Query: 121 TNFLRFIIGKNGVKVSEEKVRAIREWPTPTNATKVRSFNGLASFYKKFIKNFNSIASPLN 180
            +FL FI+GK+GVKV EEKV+AIREWPTPTNA++VRSF+GLASFY++FIK+F+SIASPL 
Sbjct: 771 IHFLGFIVGKDGVKVDEEKVKAIREWPTPTNASEVRSFHGLASFYRRFIKDFSSIASPLT 830

Query: 181 ELVKKNVKFEWKEKQEKCIH 201
           ELVKK+VKFEWKEKQE   +
Sbjct: 831 ELVKKHVKFEWKEKQENAFN 850

BLAST of Cmc10g0276731 vs. ExPASy TrEMBL
Match: A0A5D3CK70 (F15O4.13 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold304G00110 PE=4 SV=1)

HSP 1 Score: 340.9 bits (873), Expect = 3.6e-90
Identity = 163/200 (81.50%), Postives = 185/200 (92.50%), Query Frame = 0

Query: 1   MLDELHGVNLFSKIDLKSGHHQVRMHVGDEWKMAFKIKFGLYECIVMPFGITNAPSSFMR 60
           MLDELHG NLFSKIDLKSG+HQ+RMHVGDEWK AFK KFGLYE +VMPFG+TNAPS+FMR
Sbjct: 651 MLDELHGANLFSKIDLKSGYHQIRMHVGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMR 710

Query: 61  LMNCVLREYIGKFVVVYFDDILVYSKSLDEHILHVQKILLKLREEKLYANFKKCSLCLEQ 120
           LMN VL+EYIGKFVVVYFDDILVYSK L++HILHV+ ILLKLREEKLYANFKKCS CLEQ
Sbjct: 711 LMNHVLKEYIGKFVVVYFDDILVYSKGLNDHILHVKTILLKLREEKLYANFKKCSFCLEQ 770

Query: 121 TNFLRFIIGKNGVKVSEEKVRAIREWPTPTNATKVRSFNGLASFYKKFIKNFNSIASPLN 180
            +FL FI+GK+GVKV EEKV+AIREWPTPTNA++VRSF+GLASFY++FIK+F+SIASPL 
Sbjct: 771 IHFLGFIVGKDGVKVDEEKVKAIREWPTPTNASEVRSFHGLASFYRRFIKDFSSIASPLT 830

Query: 181 ELVKKNVKFEWKEKQEKCIH 201
           ELVKK+VKFEWKEKQE   +
Sbjct: 831 ELVKKHVKFEWKEKQENAFN 850

BLAST of Cmc10g0276731 vs. ExPASy TrEMBL
Match: A0A5D3BWE8 (F15O4.13 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1738G00600 PE=4 SV=1)

HSP 1 Score: 340.9 bits (873), Expect = 3.6e-90
Identity = 163/200 (81.50%), Postives = 185/200 (92.50%), Query Frame = 0

Query: 1   MLDELHGVNLFSKIDLKSGHHQVRMHVGDEWKMAFKIKFGLYECIVMPFGITNAPSSFMR 60
           MLDELHG NLFSKIDLKSG+HQ+RMHVGDEWK AFK KFGLYE +VMPFG+TNAPS+FMR
Sbjct: 651 MLDELHGANLFSKIDLKSGYHQIRMHVGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMR 710

Query: 61  LMNCVLREYIGKFVVVYFDDILVYSKSLDEHILHVQKILLKLREEKLYANFKKCSLCLEQ 120
           LMN VL+EYIGKFVVVYFDDILVYSK L++HILHV+ ILLKLREEKLYANFKKCS CLEQ
Sbjct: 711 LMNHVLKEYIGKFVVVYFDDILVYSKGLNDHILHVKTILLKLREEKLYANFKKCSFCLEQ 770

Query: 121 TNFLRFIIGKNGVKVSEEKVRAIREWPTPTNATKVRSFNGLASFYKKFIKNFNSIASPLN 180
            +FL FI+GK+GVKV EEKV+AIREWPTPTNA++VRSF+GLASFY++FIK+F+SIASPL 
Sbjct: 771 IHFLGFIVGKDGVKVDEEKVKAIREWPTPTNASEVRSFHGLASFYRRFIKDFSSIASPLT 830

Query: 181 ELVKKNVKFEWKEKQEKCIH 201
           ELVKK+VKFEWKEKQE   +
Sbjct: 831 ELVKKHVKFEWKEKQENAFN 850

BLAST of Cmc10g0276731 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 76.3 bits (186), Expect = 3.2e-14
Identity = 40/102 (39.22%), Postives = 57/102 (55.88%), Query Frame = 0

Query: 94  HVQKILLKLREEKLYANFKKCSLCLEQTNFL--RFIIGKNGVKVSEEKVRAIREWPTPTN 153
           H+  +L    + + YAN KKC+    Q  +L  R II   GV     K+ A+  WP P N
Sbjct: 3   HLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEPKN 62

Query: 154 ATKVRSFNGLASFYKKFIKNFNSIASPLNELVKKNVKFEWKE 194
            T++R F GL  +Y++F+KN+  I  PL EL+KKN   +W E
Sbjct: 63  TTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKKN-SLKWTE 103

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0067527.17.5e-9081.50Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa][more]
TYK22420.17.5e-9081.50Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa][more]
TYK26105.17.5e-9081.50F15O4.13 [Cucumis melo var. makuwa][more]
TYK02449.17.5e-9081.50F15O4.13 [Cucumis melo var. makuwa][more]
TYK11702.17.5e-9081.50F15O4.13 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
P043236.9e-3840.53Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogast... [more]
P0CT413.4e-3737.19Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24... [more]
P0CT343.4e-3737.19Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248... [more]
P0CT353.4e-3737.19Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248... [more]
P0CT363.4e-3737.19Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248... [more]
Match NameE-valueIdentityDescription
A0A5A7VK673.6e-9081.50Transposon Ty3-I Gag-Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E... [more]
A0A5D3DRJ13.6e-9081.50F15O4.13 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold111G00130 PE=4 ... [more]
A0A5D3C3D33.6e-9081.50F15O4.13 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold143G001490 PE=4... [more]
A0A5D3CK703.6e-9081.50F15O4.13 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold304G00110 PE=4 ... [more]
A0A5D3BWE83.6e-9081.50F15O4.13 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1738G00600 PE=4... [more]
Match NameE-valueIdentityDescription
ATMG00860.13.2e-1439.22DNA/RNA polymerases superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 4..124
e-value: 5.7E-21
score: 75.1
NoneNo IPR availableGENE3D3.10.10.10HIV Type 1 Reverse Transcriptase, subunit A, domain 1coord: 21..53
e-value: 1.7E-44
score: 153.7
NoneNo IPR availablePANTHERPTHR24559:SF324TRANSPOSON TY3-I GAG-POL POLYPROTEIN-LIKE PROTEINcoord: 4..195
NoneNo IPR availablePANTHERPTHR24559TRANSPOSON TY3-I GAG-POL POLYPROTEINcoord: 4..195
NoneNo IPR availableCDDcd01647RT_LTRcoord: 1..128
e-value: 6.40372E-55
score: 170.854
IPR043128Reverse transcriptase/Diguanylate cyclase domainGENE3D3.30.70.270coord: 137..200
e-value: 7.5E-21
score: 76.0
IPR043128Reverse transcriptase/Diguanylate cyclase domainGENE3D3.30.70.270coord: 1..128
e-value: 1.7E-44
score: 153.7
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 2..198

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc10g0276731.1Cmc10g0276731.1mRNA