Cmc10g0276621 (gene) Melon (Charmono) v1.1

Overview
NameCmc10g0276621
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionBeta-galactosidase
LocationCMiso1.1chr10: 11822210 .. 11822617 (-)
RNA-Seq ExpressionCmc10g0276621
SyntenyCmc10g0276621
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGGTGGCAAAATCTAAAGAAGGCATCTCCGTGTCTCAGAGAAAAGACACCCTTGATCTGCTAATCGAGATAGGTGTGTTGGGATGTCATCCCGCGGACACTCCTATTGAATTTAACTGTAAACTAGAAAACTCTGATGATCAAGTTCCAGTTGATAAAGAACAATATCAGCGCCTTGTGGGTAAATTGATTTACTTATCTCATATTCGTCCTGATATTTCTTTTGCTGTTAGTGCTGTTAGCCAGTTTATGCAGGCTCCCTACGAGGAACACATAGAAGCTGTCAAAAGAATTCTGAGATACTTAAAAACGACACCTGGTAAAGGGTTGATGTTTAGAAAGACAGACAAAATGACCGTTGAGGCATATACTGACTCGGATTGGGCAGGATCTGTTGCTGACTGA

mRNA sequence

ATGAAGGTGGCAAAATCTAAAGAAGGCATCTCCGTGTCTCAGAGAAAAGACACCCTTGATCTGCTAATCGAGATAGGTGTGTTGGGATGTCATCCCGCGGACACTCCTATTGAATTTAACTGTAAACTAGAAAACTCTGATGATCAAGTTCCAGTTGATAAAGAACAATATCAGCGCCTTGTGGGTAAATTGATTTACTTATCTCATATTCGTCCTGATATTTCTTTTGCTGTTAGTGCTGTTAGCCAGTTTATGCAGGCTCCCTACGAGGAACACATAGAAGCTGTCAAAAGAATTCTGAGATACTTAAAAACGACACCTGGTAAAGGGTTGATGTTTAGAAAGACAGACAAAATGACCGTTGAGGCATATACTGACTCGGATTGGGCAGGATCTGTTGCTGACTGA

Coding sequence (CDS)

ATGAAGGTGGCAAAATCTAAAGAAGGCATCTCCGTGTCTCAGAGAAAAGACACCCTTGATCTGCTAATCGAGATAGGTGTGTTGGGATGTCATCCCGCGGACACTCCTATTGAATTTAACTGTAAACTAGAAAACTCTGATGATCAAGTTCCAGTTGATAAAGAACAATATCAGCGCCTTGTGGGTAAATTGATTTACTTATCTCATATTCGTCCTGATATTTCTTTTGCTGTTAGTGCTGTTAGCCAGTTTATGCAGGCTCCCTACGAGGAACACATAGAAGCTGTCAAAAGAATTCTGAGATACTTAAAAACGACACCTGGTAAAGGGTTGATGTTTAGAAAGACAGACAAAATGACCGTTGAGGCATATACTGACTCGGATTGGGCAGGATCTGTTGCTGACTGA

Protein sequence

MKVAKSKEGISVSQRKDTLDLLIEIGVLGCHPADTPIEFNCKLENSDDQVPVDKEQYQRLVGKLIYLSHIRPDISFAVSAVSQFMQAPYEEHIEAVKRILRYLKTTPGKGLMFRKTDKMTVEAYTDSDWAGSVAD
Homology
BLAST of Cmc10g0276621 vs. NCBI nr
Match: TYK25905.1 (Cysteine-rich RLK (receptor-like protein kinase) 8 [Cucumis melo var. makuwa])

HSP 1 Score: 266.9 bits (681), Expect = 9.3e-68
Identity = 132/135 (97.78%), Postives = 132/135 (97.78%), Query Frame = 0

Query: 1   MKVAKSKEGISVSQRKDTLDLLIEIGVLGCHPADTPIEFNCKLENSDDQVPVDKEQYQRL 60
           MKVAKSKEGI VSQRKDTLDLL EIGVLGCHPADTPIEFNCKLENSDDQVPVDKEQYQRL
Sbjct: 653 MKVAKSKEGIFVSQRKDTLDLLTEIGVLGCHPADTPIEFNCKLENSDDQVPVDKEQYQRL 712

Query: 61  VGKLIYLSHIRPDISFAVSAVSQFMQAPYEEHIEAVKRILRYLKTTPGKGLMFRKTDKMT 120
           VGKLIYLSHIRPDISFAVSAVSQFMQAPYEEHIEAVKRILRYLKTTPGKGLMFRKTDKMT
Sbjct: 713 VGKLIYLSHIRPDISFAVSAVSQFMQAPYEEHIEAVKRILRYLKTTPGKGLMFRKTDKMT 772

Query: 121 VEAYTDSDWAGSVAD 136
           VEAYTDSDWAGSV D
Sbjct: 773 VEAYTDSDWAGSVVD 787

BLAST of Cmc10g0276621 vs. NCBI nr
Match: TYK26804.1 (putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 241.9 bits (616), Expect = 3.2e-60
Identity = 119/135 (88.15%), Postives = 125/135 (92.59%), Query Frame = 0

Query: 1   MKVAKSKEGISVSQRKDTLDLLIEIGVLGCHPADTPIEFNCKLENSDDQVPVDKEQYQRL 60
           M+VA+SKEGISVSQRK TLDLL EIG+LGC PADTPIEFNCKL N DDQVPVDKEQYQRL
Sbjct: 81  MEVARSKEGISVSQRKYTLDLLTEIGMLGCRPADTPIEFNCKLGNFDDQVPVDKEQYQRL 140

Query: 61  VGKLIYLSHIRPDISFAVSAVSQFMQAPYEEHIEAVKRILRYLKTTPGKGLMFRKTDKMT 120
           VGKLIYLSH RPDISFAVSAVSQFMQAPYEEH+EAVKRILRYLKTTP KGLMFRKT+K  
Sbjct: 141 VGKLIYLSHTRPDISFAVSAVSQFMQAPYEEHMEAVKRILRYLKTTPNKGLMFRKTNKKA 200

Query: 121 VEAYTDSDWAGSVAD 136
           +EAYTDSDWAGSV D
Sbjct: 201 IEAYTDSDWAGSVVD 215

BLAST of Cmc10g0276621 vs. NCBI nr
Match: TYK23097.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 241.5 bits (615), Expect = 4.2e-60
Identity = 120/135 (88.89%), Postives = 125/135 (92.59%), Query Frame = 0

Query: 1    MKVAKSKEGISVSQRKDTLDLLIEIGVLGCHPADTPIEFNCKLENSDDQVPVDKEQYQRL 60
            M+VA+SKEGISVSQRK TLDLL E G+LGC  ADTPIEFNCKL NSDDQVPVDKEQYQRL
Sbjct: 1479 MEVARSKEGISVSQRKYTLDLLTETGMLGCCLADTPIEFNCKLGNSDDQVPVDKEQYQRL 1538

Query: 61   VGKLIYLSHIRPDISFAVSAVSQFMQAPYEEHIEAVKRILRYLKTTPGKGLMFRKTDKMT 120
            VGKLIYLSH  PDISFAVSAVSQFMQAPYEEH+EAVKRILRYLKTTPGKGLMFRKTDK T
Sbjct: 1539 VGKLIYLSHTHPDISFAVSAVSQFMQAPYEEHMEAVKRILRYLKTTPGKGLMFRKTDKKT 1598

Query: 121  VEAYTDSDWAGSVAD 136
            +EAYTDSDWAGSV D
Sbjct: 1599 IEAYTDSDWAGSVVD 1613

BLAST of Cmc10g0276621 vs. NCBI nr
Match: KAA0025138.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 241.1 bits (614), Expect = 5.5e-60
Identity = 119/135 (88.15%), Postives = 125/135 (92.59%), Query Frame = 0

Query: 1    MKVAKSKEGISVSQRKDTLDLLIEIGVLGCHPADTPIEFNCKLENSDDQVPVDKEQYQRL 60
            M+VA+SKEGISVSQRK TLDLL E G+LGC  ADTPIEFNCKL NSDDQVPVDKEQYQRL
Sbjct: 1462 MEVARSKEGISVSQRKYTLDLLTETGMLGCCLADTPIEFNCKLGNSDDQVPVDKEQYQRL 1521

Query: 61   VGKLIYLSHIRPDISFAVSAVSQFMQAPYEEHIEAVKRILRYLKTTPGKGLMFRKTDKMT 120
            VGKLIYLSH  PDISFAVSAVSQFMQAPYEEH+EAVKRILRYLKTTPGKGLMFRKTDK T
Sbjct: 1522 VGKLIYLSHTHPDISFAVSAVSQFMQAPYEEHMEAVKRILRYLKTTPGKGLMFRKTDKKT 1581

Query: 121  VEAYTDSDWAGSVAD 136
            +EAYTDSDWAGS+ D
Sbjct: 1582 IEAYTDSDWAGSIVD 1596

BLAST of Cmc10g0276621 vs. NCBI nr
Match: KAA0067153.1 (putative mitochondrial protein [Cucumis melo var. makuwa] >TYK26002.1 putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 239.6 bits (610), Expect = 1.6e-59
Identity = 118/135 (87.41%), Postives = 125/135 (92.59%), Query Frame = 0

Query: 1    MKVAKSKEGISVSQRKDTLDLLIEIGVLGCHPADTPIEFNCKLENSDDQVPVDKEQYQRL 60
            ++VAKSKEGISVSQRK TLDLLIE G+LGC PA+TPIEFNCKL NSDDQV VDKEQYQRL
Sbjct: 916  IEVAKSKEGISVSQRKYTLDLLIETGILGCRPANTPIEFNCKLGNSDDQVSVDKEQYQRL 975

Query: 61   VGKLIYLSHIRPDISFAVSAVSQFMQAPYEEHIEAVKRILRYLKTTPGKGLMFRKTDKMT 120
            VGKLIYLSH R DISFAVSAVSQFMQ PYEEH+EAVKRI+RYLKTTPGKGLMFRKTDK T
Sbjct: 976  VGKLIYLSHTRLDISFAVSAVSQFMQTPYEEHMEAVKRIMRYLKTTPGKGLMFRKTDKKT 1035

Query: 121  VEAYTDSDWAGSVAD 136
            +EAYTDSDWAGSV D
Sbjct: 1036 IEAYTDSDWAGSVVD 1050

BLAST of Cmc10g0276621 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 3.8e-24
Identity = 55/127 (43.31%), Postives = 80/127 (62.99%), Query Frame = 0

Query: 9    GISVSQRKDTLDLLIEIGVLGCHPADTPIEFNCKLENSDDQVPVDKEQYQRLVGKLIYLS 68
            G+ +SQR+  LDLL    ++   P  TP+  + KL         D  +Y+ +VG L YL+
Sbjct: 1197 GLHLSQRRYILDLLARTNMITAKPVTTPMAPSPKLSLYSGTKLTDPTEYRGIVGSLQYLA 1256

Query: 69   HIRPDISFAVSAVSQFMQAPYEEHIEAVKRILRYLKTTPGKGLMFRKTDKMTVEAYTDSD 128
              RPDIS+AV+ +SQFM  P EEH++A+KRILRYL  TP  G+  +K + +++ AY+D+D
Sbjct: 1257 FTRPDISYAVNRLSQFMHMPTEEHLQALKRILRYLAGTPNHGIFLKKGNTLSLHAYSDAD 1316

Query: 129  WAGSVAD 136
            WAG   D
Sbjct: 1317 WAGDKDD 1323

BLAST of Cmc10g0276621 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 3.3e-23
Identity = 54/129 (41.86%), Postives = 85/129 (65.89%), Query Frame = 0

Query: 8    EGISVSQRKDTLDLLIEIGVLGCHPADTPIEFNCKLE-NSDDQVPVDKEQYQRLVGKLIY 67
            +G+ +SQR+ TLDLL    +L   P  TP+  + KL  +S  ++P D  +Y+ +VG L Y
Sbjct: 1179 QGLHLSQRRYTLDLLARTNMLTAKPVATPMATSPKLTLHSGTKLP-DPTEYRGIVGSLQY 1238

Query: 68   LSHIRPDISFAVSAVSQFMQAPYEEHIEAVKRILRYLKTTPGKGLMFRKTDKMTVEAYTD 127
            L+  RPD+S+AV+ +SQ+M  P ++H  A+KR+LRYL  TP  G+  +K + +++ AY+D
Sbjct: 1239 LAFTRPDLSYAVNRLSQYMHMPTDDHWNALKRVLRYLAGTPDHGIFLKKGNTLSLHAYSD 1298

Query: 128  SDWAGSVAD 136
            +DWAG   D
Sbjct: 1299 ADWAGDTDD 1306

BLAST of Cmc10g0276621 vs. ExPASy Swiss-Prot
Match: P92519 (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 1.2e-17
Identity = 49/131 (37.40%), Postives = 71/131 (54.20%), Query Frame = 0

Query: 1   MKVAKSKEGISVSQRKDTLDLLIEIGVLGCHPADTPIEFNCKLENSDDQVPVDKEQYQRL 60
           +++     G+ +SQ K    +L   G+L C P  TP+        S  + P D   ++ +
Sbjct: 45  IQIKTHPSGLFLSQTKYAEQILNNAGMLDCKPMSTPLPLKLNSSVSTAKYP-DPSDFRSI 104

Query: 61  VGKLIYLSHIRPDISFAVSAVSQFMQAPYEEHIEAVKRILRYLKTTPGKGLMFRKTDKMT 120
           VG L YL+  RPDIS+AV+ V Q M  P     + +KR+LRY+K T   GL   K  K+ 
Sbjct: 105 VGALQYLTLTRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLN 164

Query: 121 VEAYTDSDWAG 132
           V+A+ DSDWAG
Sbjct: 165 VQAFCDSDWAG 174

BLAST of Cmc10g0276621 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 2.6e-12
Identity = 49/142 (34.51%), Postives = 76/142 (53.52%), Query Frame = 0

Query: 1    MKVAKSKEG--ISVSQRKDTLDLLIEIGVLGCHPADTPIEFNCKLENS------DDQVPV 60
            MK+ + +    + +SQ K    +L    +    P  TP+  + KL         +++  +
Sbjct: 1047 MKIVRERTSRKLWLSQEKYIERVLERFNMKNAKPVSTPLAGHLKLSKKMCPTTVEEKGNM 1106

Query: 61   DKEQYQRLVGKLIY-LSHIRPDISFAVSAVSQFMQAPYEEHIEAVKRILRYLKTTPGKGL 120
             K  Y   VG L+Y +   RPDI+ AV  VS+F++ P +EH EAVK ILRYL+ T G  L
Sbjct: 1107 AKVPYSSAVGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDCL 1166

Query: 121  MFRKTDKMTVEAYTDSDWAGSV 134
             F  +D + ++ YTD+D AG +
Sbjct: 1167 CFGGSDPI-LKGYTDADMAGDI 1187

BLAST of Cmc10g0276621 vs. ExPASy Swiss-Prot
Match: P0CV72 (Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 PE=2 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 3.2e-10
Identity = 33/78 (42.31%), Postives = 48/78 (61.54%), Query Frame = 0

Query: 57  YQRLVGKLIYLSHI-RPDISFAVSAVSQFMQAPYEEHIEAVKRILRYLKTTPGKGLMFRK 116
           Y   VG ++YL  + RPD++ AV  +SQF   P   H +A+KR+LRYL++T   GL F +
Sbjct: 6   YLSAVGAIMYLMVVTRPDLAAAVGVLSQFASDPCPTHWQALKRVLRYLQSTQTYGLEFTR 65

Query: 117 TDKMTVEAYTDSDWAGSV 134
                +  Y+D+DWAG V
Sbjct: 66  AGTAKLVGYSDADWAGDV 83

BLAST of Cmc10g0276621 vs. ExPASy TrEMBL
Match: A0A5D3DQY9 (Cysteine-rich RLK (Receptor-like protein kinase) 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold436G001350 PE=4 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 4.5e-68
Identity = 132/135 (97.78%), Postives = 132/135 (97.78%), Query Frame = 0

Query: 1   MKVAKSKEGISVSQRKDTLDLLIEIGVLGCHPADTPIEFNCKLENSDDQVPVDKEQYQRL 60
           MKVAKSKEGI VSQRKDTLDLL EIGVLGCHPADTPIEFNCKLENSDDQVPVDKEQYQRL
Sbjct: 653 MKVAKSKEGIFVSQRKDTLDLLTEIGVLGCHPADTPIEFNCKLENSDDQVPVDKEQYQRL 712

Query: 61  VGKLIYLSHIRPDISFAVSAVSQFMQAPYEEHIEAVKRILRYLKTTPGKGLMFRKTDKMT 120
           VGKLIYLSHIRPDISFAVSAVSQFMQAPYEEHIEAVKRILRYLKTTPGKGLMFRKTDKMT
Sbjct: 713 VGKLIYLSHIRPDISFAVSAVSQFMQAPYEEHIEAVKRILRYLKTTPGKGLMFRKTDKMT 772

Query: 121 VEAYTDSDWAGSVAD 136
           VEAYTDSDWAGSV D
Sbjct: 773 VEAYTDSDWAGSVVD 787

BLAST of Cmc10g0276621 vs. ExPASy TrEMBL
Match: A0A5D3DTD0 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold124G001170 PE=4 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 1.6e-60
Identity = 119/135 (88.15%), Postives = 125/135 (92.59%), Query Frame = 0

Query: 1   MKVAKSKEGISVSQRKDTLDLLIEIGVLGCHPADTPIEFNCKLENSDDQVPVDKEQYQRL 60
           M+VA+SKEGISVSQRK TLDLL EIG+LGC PADTPIEFNCKL N DDQVPVDKEQYQRL
Sbjct: 81  MEVARSKEGISVSQRKYTLDLLTEIGMLGCRPADTPIEFNCKLGNFDDQVPVDKEQYQRL 140

Query: 61  VGKLIYLSHIRPDISFAVSAVSQFMQAPYEEHIEAVKRILRYLKTTPGKGLMFRKTDKMT 120
           VGKLIYLSH RPDISFAVSAVSQFMQAPYEEH+EAVKRILRYLKTTP KGLMFRKT+K  
Sbjct: 141 VGKLIYLSHTRPDISFAVSAVSQFMQAPYEEHMEAVKRILRYLKTTPNKGLMFRKTNKKA 200

Query: 121 VEAYTDSDWAGSVAD 136
           +EAYTDSDWAGSV D
Sbjct: 201 IEAYTDSDWAGSVVD 215

BLAST of Cmc10g0276621 vs. ExPASy TrEMBL
Match: A0A5D3DHC0 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G00790 PE=3 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 2.0e-60
Identity = 120/135 (88.89%), Postives = 125/135 (92.59%), Query Frame = 0

Query: 1    MKVAKSKEGISVSQRKDTLDLLIEIGVLGCHPADTPIEFNCKLENSDDQVPVDKEQYQRL 60
            M+VA+SKEGISVSQRK TLDLL E G+LGC  ADTPIEFNCKL NSDDQVPVDKEQYQRL
Sbjct: 1479 MEVARSKEGISVSQRKYTLDLLTETGMLGCCLADTPIEFNCKLGNSDDQVPVDKEQYQRL 1538

Query: 61   VGKLIYLSHIRPDISFAVSAVSQFMQAPYEEHIEAVKRILRYLKTTPGKGLMFRKTDKMT 120
            VGKLIYLSH  PDISFAVSAVSQFMQAPYEEH+EAVKRILRYLKTTPGKGLMFRKTDK T
Sbjct: 1539 VGKLIYLSHTHPDISFAVSAVSQFMQAPYEEHMEAVKRILRYLKTTPGKGLMFRKTDKKT 1598

Query: 121  VEAYTDSDWAGSVAD 136
            +EAYTDSDWAGSV D
Sbjct: 1599 IEAYTDSDWAGSVVD 1613

BLAST of Cmc10g0276621 vs. ExPASy TrEMBL
Match: A0A5A7SG80 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold124G00380 PE=3 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 2.6e-60
Identity = 119/135 (88.15%), Postives = 125/135 (92.59%), Query Frame = 0

Query: 1    MKVAKSKEGISVSQRKDTLDLLIEIGVLGCHPADTPIEFNCKLENSDDQVPVDKEQYQRL 60
            M+VA+SKEGISVSQRK TLDLL E G+LGC  ADTPIEFNCKL NSDDQVPVDKEQYQRL
Sbjct: 1462 MEVARSKEGISVSQRKYTLDLLTETGMLGCCLADTPIEFNCKLGNSDDQVPVDKEQYQRL 1521

Query: 61   VGKLIYLSHIRPDISFAVSAVSQFMQAPYEEHIEAVKRILRYLKTTPGKGLMFRKTDKMT 120
            VGKLIYLSH  PDISFAVSAVSQFMQAPYEEH+EAVKRILRYLKTTPGKGLMFRKTDK T
Sbjct: 1522 VGKLIYLSHTHPDISFAVSAVSQFMQAPYEEHMEAVKRILRYLKTTPGKGLMFRKTDKKT 1581

Query: 121  VEAYTDSDWAGSVAD 136
            +EAYTDSDWAGS+ D
Sbjct: 1582 IEAYTDSDWAGSIVD 1596

BLAST of Cmc10g0276621 vs. ExPASy TrEMBL
Match: A0A5D3DR31 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1567G00050 PE=4 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 7.7e-60
Identity = 118/135 (87.41%), Postives = 125/135 (92.59%), Query Frame = 0

Query: 1    MKVAKSKEGISVSQRKDTLDLLIEIGVLGCHPADTPIEFNCKLENSDDQVPVDKEQYQRL 60
            ++VAKSKEGISVSQRK TLDLLIE G+LGC PA+TPIEFNCKL NSDDQV VDKEQYQRL
Sbjct: 916  IEVAKSKEGISVSQRKYTLDLLIETGILGCRPANTPIEFNCKLGNSDDQVSVDKEQYQRL 975

Query: 61   VGKLIYLSHIRPDISFAVSAVSQFMQAPYEEHIEAVKRILRYLKTTPGKGLMFRKTDKMT 120
            VGKLIYLSH R DISFAVSAVSQFMQ PYEEH+EAVKRI+RYLKTTPGKGLMFRKTDK T
Sbjct: 976  VGKLIYLSHTRLDISFAVSAVSQFMQTPYEEHMEAVKRIMRYLKTTPGKGLMFRKTDKKT 1035

Query: 121  VEAYTDSDWAGSVAD 136
            +EAYTDSDWAGSV D
Sbjct: 1036 IEAYTDSDWAGSVVD 1050

BLAST of Cmc10g0276621 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 105.5 bits (262), Expect = 3.3e-23
Identity = 52/129 (40.31%), Postives = 83/129 (64.34%), Query Frame = 0

Query: 1   MKVAKSKEGISVSQRKDTLDLLIEIGVLGCHPADTPIEFNCKLENSDDQVPVDKEQYQRL 60
           +++A+S  GI++ QRK  LDLL E G+LGC P+  P++ +           VD + Y+RL
Sbjct: 322 LEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRL 381

Query: 61  VGKLIYLSHIRPDISFAVSAVSQFMQAPYEEHIEAVKRILRYLKTTPGKGLMFRKTDKMT 120
           +G+L+YL   R DISFAV+ +SQF +AP   H +AV +IL Y+K T G+GL +    +M 
Sbjct: 382 IGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQ 441

Query: 121 VEAYTDSDW 130
           ++ ++D+ +
Sbjct: 442 LQVFSDASF 450

BLAST of Cmc10g0276621 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 90.9 bits (224), Expect = 8.5e-19
Identity = 49/131 (37.40%), Postives = 71/131 (54.20%), Query Frame = 0

Query: 1   MKVAKSKEGISVSQRKDTLDLLIEIGVLGCHPADTPIEFNCKLENSDDQVPVDKEQYQRL 60
           +++     G+ +SQ K    +L   G+L C P  TP+        S  + P D   ++ +
Sbjct: 45  IQIKTHPSGLFLSQTKYAEQILNNAGMLDCKPMSTPLPLKLNSSVSTAKYP-DPSDFRSI 104

Query: 61  VGKLIYLSHIRPDISFAVSAVSQFMQAPYEEHIEAVKRILRYLKTTPGKGLMFRKTDKMT 120
           VG L YL+  RPDIS+AV+ V Q M  P     + +KR+LRY+K T   GL   K  K+ 
Sbjct: 105 VGALQYLTLTRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLN 164

Query: 121 VEAYTDSDWAG 132
           V+A+ DSDWAG
Sbjct: 165 VQAFCDSDWAG 174

BLAST of Cmc10g0276621 vs. TAIR 10
Match: ATMG00240.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 63.5 bits (153), Expect = 1.5e-10
Identity = 28/66 (42.42%), Postives = 45/66 (68.18%), Query Frame = 0

Query: 65  IYLSHIRPDISFAVSAVSQFMQAPYEEHIEAVKRILRYLKTTPGKGLMFRKTDKMTVEAY 124
           +YL+  RPD++FAV+ +SQF  A     ++AV ++L Y+K T G+GL +  T  + ++A+
Sbjct: 1   MYLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAF 60

Query: 125 TDSDWA 131
            DSDWA
Sbjct: 61  ADSDWA 66

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
TYK25905.19.3e-6897.78Cysteine-rich RLK (receptor-like protein kinase) 8 [Cucumis melo var. makuwa][more]
TYK26804.13.2e-6088.15putative mitochondrial protein [Cucumis melo var. makuwa][more]
TYK23097.14.2e-6088.89Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m... [more]
KAA0025138.15.5e-6088.15Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m... [more]
KAA0067153.11.6e-5987.41putative mitochondrial protein [Cucumis melo var. makuwa] >TYK26002.1 putative m... [more]
Match NameE-valueIdentityDescription
Q94HW23.8e-2443.31Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... [more]
Q9ZT943.3e-2341.86Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... [more]
P925191.2e-1737.40Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 ... [more]
P109782.6e-1234.51Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... [more]
P0CV723.2e-1042.31Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 P... [more]
Match NameE-valueIdentityDescription
A0A5D3DQY94.5e-6897.78Cysteine-rich RLK (Receptor-like protein kinase) 8 OS=Cucumis melo var. makuwa O... [more]
A0A5D3DTD01.6e-6088.15Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s... [more]
A0A5D3DHC02.0e-6088.89Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... [more]
A0A5A7SG802.6e-6088.15Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... [more]
A0A5D3DR317.7e-6087.41Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s... [more]
Match NameE-valueIdentityDescription
AT4G23160.13.3e-2340.31cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [more]
ATMG00810.18.5e-1937.40DNA/RNA polymerases superfamily protein [more]
ATMG00240.11.5e-1042.42Gag-Pol-related retrotransposon family protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 36..130
NoneNo IPR availablePANTHERPTHR11439:SF335SUBFAMILY NOT NAMEDcoord: 36..130
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 36..133

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc10g0276621.1Cmc10g0276621.1mRNA