Cmc10g0276431 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc10g0276431
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Pol protein
Location	CMiso1.1chr10: 11402002 .. 11403067 (+)
RNA-Seq Expression	Cmc10g0276431
Synteny	Cmc10g0276431

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCACCCAGGTAGTACGAAGATGTATCAGGACTTAAAGCGGGTTTATTGGTGGCGTAACATGAAGAGGGAAGTAGCAGAATTTGTTAGTAAATGCTTGGTGTGTCAGCAGGTTAAGGCACCAAGGCAGAAACCAGCGGGTTTATTACAACCCTTGAGCATACCGGAATGGAAGTGGGAGAACGTGTCCATGGATTTCATTACCGGGCTACCGAGAACTCTGAGGGGATTTACAGTGATCTGGGTTGTGGTGGACAGACTTACTAAATCAGCGCACTTTGTTCCGGGTAAATCCACCTATACTGCTTGTAAGTGGGCACAGTTGTACATGTCTGAGATAGTGAGATTGCACGGAGTGCCAGTGTCGATTGTTTCTGACAGAGATGCCCGTTTCACTTCCAAATTTTGGAAGGGTTTGCAGACTGCTATGGGCACGAGGTTGGACTTTAGTACGGCTTTCCATCCACAGACTGACGGTCAGACTGAGCGTCTGAACCAGGTTTTAGAGGATATGTTGCGAGCGTGTGCATTGGAATTTCCAGGTAGCTGGGACTCCCACTTACATTTGATGGAATTTGCTTATAATAACAGTTATCAGGCTACTATTGGCATGGCACCGTTTGAGGCCCTGTACGGCAAATGTTGTAGATCCCCGGTTTGCTGGGATGAGGTAGGTGAGCAGATATTGATGGGTCCTGAGTTAGTTCAGTCTACTAACGAAGCGATACAGAAGATTAGATCACGCATGCATACCGCTCAGAGTAGGCAGAAGAGTTATGCAGATGTGAGGCGGAAGGACCTTGAGTTTGAGGTAGGGGATAAAGTGTTCTTAAAGGTAGCACCTATGAGAGGTGTCTTGCGTTTTGAAAGGAGGGGAAAGTTGAGTCCCCGTTTTGTTGGGCCGTTTGAGATTCTGGAGCGGATTGGCCCTGTAGCCTATCGCTTGTCGTTGCCTCCATCACTCACGACAGTCCATGATGTGTTTCACGTTTCTATGTTGAGGAAGTACGTGCCAGATCCATCCCATGTAGTGGATTACGAGCCACTAGAGATTGATGAAAACTTGA

mRNA sequence

ATGCACCCAGGTAGTACGAAGATGTATCAGGACTTAAAGCGGGTTTATTGGTGGCGTAACATGAAGAGGGAAGTAGCAGAATTTGTTAGTAAATGCTTGGTGTGTCAGCAGGTTAAGGCACCAAGGCAGAAACCAGCGGGTTTATTACAACCCTTGAGCATACCGGAATGGAAGTGGGAGAACGTGTCCATGGATTTCATTACCGGGCTACCGAGAACTCTGAGGGGATTTACAGTGATCTGGGTTGTGGTGGACAGACTTACTAAATCAGCGCACTTTGTTCCGGGTAAATCCACCTATACTGCTTGTAAGTGGGCACAGTTGTACATGTCTGAGATAGTGAGATTGCACGGAGTGCCAGTGTCGATTGTTTCTGACAGAGATGCCCGTTTCACTTCCAAATTTTGGAAGGGTTTGCAGACTGCTATGGGCACGAGGTTGGACTTTAGTACGGCTTTCCATCCACAGACTGACGGTCAGACTGAGCGTCTGAACCAGGTTTTAGAGGATATGTTGCGAGCGTGTGCATTGGAATTTCCAGGTAGCTGGGACTCCCACTTACATTTGATGGAATTTGCTTATAATAACAGTTATCAGGCTACTATTGGCATGGCACCGTTTGAGGCCCTGTACGGCAAATGTTGTAGATCCCCGGTTTGCTGGGATGAGGTAGGTGAGCAGATATTGATGGGTCCTGAGTTAGTTCAGTCTACTAACGAAGCGATACAGAAGATTAGATCACGCATGCATACCGCTCAGAGTAGGCAGAAGAGTTATGCAGATGTGAGGCGGAAGGACCTTGAGTTTGAGGTAGGGGATAAAGTGTTCTTAAAGGTAGCACCTATGAGAGGTGTCTTGCGTTTTGAAAGGAGGGGAAAGTTGAGTCCCCGTTTTGTTGGGCCGTTTGAGATTCTGGAGCGGATTGGCCCTGTAGCCTATCGCTTGTCGTTGCCTCCATCACTCACGACAGTCCATGATGTGTTTCACGTTTCTATGTTGAGGAAATTGATGAAAACTTGA

Coding sequence (CDS)

ATGCACCCAGGTAGTACGAAGATGTATCAGGACTTAAAGCGGGTTTATTGGTGGCGTAACATGAAGAGGGAAGTAGCAGAATTTGTTAGTAAATGCTTGGTGTGTCAGCAGGTTAAGGCACCAAGGCAGAAACCAGCGGGTTTATTACAACCCTTGAGCATACCGGAATGGAAGTGGGAGAACGTGTCCATGGATTTCATTACCGGGCTACCGAGAACTCTGAGGGGATTTACAGTGATCTGGGTTGTGGTGGACAGACTTACTAAATCAGCGCACTTTGTTCCGGGTAAATCCACCTATACTGCTTGTAAGTGGGCACAGTTGTACATGTCTGAGATAGTGAGATTGCACGGAGTGCCAGTGTCGATTGTTTCTGACAGAGATGCCCGTTTCACTTCCAAATTTTGGAAGGGTTTGCAGACTGCTATGGGCACGAGGTTGGACTTTAGTACGGCTTTCCATCCACAGACTGACGGTCAGACTGAGCGTCTGAACCAGGTTTTAGAGGATATGTTGCGAGCGTGTGCATTGGAATTTCCAGGTAGCTGGGACTCCCACTTACATTTGATGGAATTTGCTTATAATAACAGTTATCAGGCTACTATTGGCATGGCACCGTTTGAGGCCCTGTACGGCAAATGTTGTAGATCCCCGGTTTGCTGGGATGAGGTAGGTGAGCAGATATTGATGGGTCCTGAGTTAGTTCAGTCTACTAACGAAGCGATACAGAAGATTAGATCACGCATGCATACCGCTCAGAGTAGGCAGAAGAGTTATGCAGATGTGAGGCGGAAGGACCTTGAGTTTGAGGTAGGGGATAAAGTGTTCTTAAAGGTAGCACCTATGAGAGGTGTCTTGCGTTTTGAAAGGAGGGGAAAGTTGAGTCCCCGTTTTGTTGGGCCGTTTGAGATTCTGGAGCGGATTGGCCCTGTAGCCTATCGCTTGTCGTTGCCTCCATCACTCACGACAGTCCATGATGTGTTTCACGTTTCTATGTTGAGGAAATTGATGAAAACTTGA

Protein sequence

MHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTACKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWDEVGEQILMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGPVAYRLSLPPSLTTVHDVFHVSMLRKLMKT

Homology

[Close]

BLAST of Cmc10g0276431 vs. NCBI nr
Match: KAA0060848.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 683.7 bits (1763), Expect = 8.0e-193
Identity = 329/335 (98.21%), Postives = 331/335 (98.81%), Query Frame = 0


Query: 1   MHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWE 60
           MHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWE
Sbjct: 143 MHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWE 202

Query: 61  NVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTACKWAQLYMSEIVRLHGVP 120
           NVSMDFI GLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTA KWAQLYMSEIVRLHGVP
Sbjct: 203 NVSMDFIIGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVP 262

Query: 121 VSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFP 180
           VSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFP
Sbjct: 263 VSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFP 322

Query: 181 GSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWDEVGEQILMGPELVQSTNE 240
           GSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWDEVGEQ LMGPELVQSTNE
Sbjct: 323 GSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWDEVGEQRLMGPELVQSTNE 382

Query: 241 AIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVG 300
           AIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFE+RGKLSPRFVG
Sbjct: 383 AIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFEKRGKLSPRFVG 442

Query: 301 PFEILERIGPVAYRLSLPPSLTTVHDVFHVSMLRK 336
           PFEILERIGPVAYRL+LPPSLTT HDVFHVSMLRK
Sbjct: 443 PFEILERIGPVAYRLALPPSLTTAHDVFHVSMLRK 477

[Close]

BLAST of Cmc10g0276431 vs. NCBI nr
Match: KAA0051368.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 681.8 bits (1758), Expect = 3.0e-192
Identity = 327/335 (97.61%), Postives = 332/335 (99.10%), Query Frame = 0


Query: 1    MHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWE 60
            MHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWE
Sbjct: 1039 MHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWE 1098

Query: 61   NVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTACKWAQLYMSEIVRLHGVP 120
            NVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTA KWAQLYMSEIVRLHGVP
Sbjct: 1099 NVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVP 1158

Query: 121  VSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFP 180
            VSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFP
Sbjct: 1159 VSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFP 1218

Query: 181  GSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWDEVGEQILMGPELVQSTNE 240
            GSWDSHLHLMEFAYNNSYQATIGMAPFEALYG+CCRSPVCW EVGEQ LMGPELVQSTNE
Sbjct: 1219 GSWDSHLHLMEFAYNNSYQATIGMAPFEALYGRCCRSPVCWGEVGEQRLMGPELVQSTNE 1278

Query: 241  AIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVG 300
            AIQKIRSRMHTAQSRQKSYADVRRKDLEFE+GDKVFLKVAPM+GVLRFERRGKLSPRFVG
Sbjct: 1279 AIQKIRSRMHTAQSRQKSYADVRRKDLEFEIGDKVFLKVAPMKGVLRFERRGKLSPRFVG 1338

Query: 301  PFEILERIGPVAYRLSLPPSLTTVHDVFHVSMLRK 336
            PFEILERIGPVAYRL+LPPSL+TVHDVFHVSMLRK
Sbjct: 1339 PFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK 1373

[Close]

BLAST of Cmc10g0276431 vs. NCBI nr
Match: KAA0043669.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 681.8 bits (1758), Expect = 3.0e-192
Identity = 327/335 (97.61%), Postives = 332/335 (99.10%), Query Frame = 0


Query: 1   MHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWE 60
           MHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWE
Sbjct: 143 MHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWE 202

Query: 61  NVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTACKWAQLYMSEIVRLHGVP 120
           NVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTA KWAQLYMSEIVRLHGVP
Sbjct: 203 NVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVP 262

Query: 121 VSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFP 180
           VSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFP
Sbjct: 263 VSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFP 322

Query: 181 GSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWDEVGEQILMGPELVQSTNE 240
            SWDSHLHLMEFAYNNSYQATIGMAPFEALYG+CCRSPVCWDEVGEQ LMGPELVQSTNE
Sbjct: 323 DSWDSHLHLMEFAYNNSYQATIGMAPFEALYGRCCRSPVCWDEVGEQRLMGPELVQSTNE 382

Query: 241 AIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVG 300
           A+QKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPM+GVLRFERRGKLSPRFVG
Sbjct: 383 AVQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMKGVLRFERRGKLSPRFVG 442

Query: 301 PFEILERIGPVAYRLSLPPSLTTVHDVFHVSMLRK 336
           PFEILERIGPVAYRL+LPPSL+TVHDVFHVSMLRK
Sbjct: 443 PFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK 477

[Close]

BLAST of Cmc10g0276431 vs. NCBI nr
Match: KAA0066456.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 680.6 bits (1755), Expect = 6.8e-192
Identity = 327/335 (97.61%), Postives = 332/335 (99.10%), Query Frame = 0


Query: 1    MHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWE 60
            MHPGSTK+YQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWE
Sbjct: 1089 MHPGSTKIYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWE 1148

Query: 61   NVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTACKWAQLYMSEIVRLHGVP 120
            NVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTA KWAQLYMSEIVRLHGVP
Sbjct: 1149 NVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVP 1208

Query: 121  VSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFP 180
            VSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFP
Sbjct: 1209 VSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFP 1268

Query: 181  GSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWDEVGEQILMGPELVQSTNE 240
            GSWDSHLHLMEFAYNNSYQATIGMAPFEALYG+CCRSPVCW EVGEQ LMGPELVQSTNE
Sbjct: 1269 GSWDSHLHLMEFAYNNSYQATIGMAPFEALYGRCCRSPVCWGEVGEQRLMGPELVQSTNE 1328

Query: 241  AIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVG 300
            AIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGV+RFERRGKLSPRFVG
Sbjct: 1329 AIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVVRFERRGKLSPRFVG 1388

Query: 301  PFEILERIGPVAYRLSLPPSLTTVHDVFHVSMLRK 336
            PFEILERIGPVAYRL+LPPSL+TVHDVFHVSMLRK
Sbjct: 1389 PFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK 1423

[Close]

BLAST of Cmc10g0276431 vs. NCBI nr
Match: KAA0025425.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 678.7 bits (1750), Expect = 2.6e-191
Identity = 328/335 (97.91%), Postives = 330/335 (98.51%), Query Frame = 0


Query: 1   MHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWE 60
           MHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWE
Sbjct: 78  MHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWE 137

Query: 61  NVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTACKWAQLYMSEIVRLHGVP 120
           NVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTA KWAQLYMSEIVRLHGVP
Sbjct: 138 NVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVP 197

Query: 121 VSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFP 180
           VSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFP
Sbjct: 198 VSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFP 257

Query: 181 GSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWDEVGEQILMGPELVQSTNE 240
           GSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCW EVGEQ LMG ELVQSTNE
Sbjct: 258 GSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGLELVQSTNE 317

Query: 241 AIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVG 300
           AIQKIRSRMHTAQSRQKSYADVRR DLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVG
Sbjct: 318 AIQKIRSRMHTAQSRQKSYADVRRNDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVG 377

Query: 301 PFEILERIGPVAYRLSLPPSLTTVHDVFHVSMLRK 336
           PFEILERIGPVAYRL+LPPSL+TVHDVFHVSMLRK
Sbjct: 378 PFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK 412

[Close]

BLAST of Cmc10g0276431 vs. ExPASy Swiss-Prot
Match: Q9UR07 (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 1.7e-52
Identity = 117/338 (34.62%), Postives = 183/338 (54.14%), Query Frame = 0


Query: 1    MHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWE 60
            +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  WE
Sbjct: 926  IHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWE 985

Query: 61   NVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTACKWAQLYMSEIVRLHGVP 120
            ++SMDFIT LP +  G+  ++VVVDR +K A  VP   + TA + A+++   ++   G P
Sbjct: 986  SLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNP 1045

Query: 121  VSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFP 180
              I++D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR      P
Sbjct: 1046 KEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHP 1105

Query: 181  GSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWDEVGEQILMGPELVQSTN 240
             +W  H+ L++ +YNN+  +   M PFE ++      SP+      ++     E  Q T 
Sbjct: 1106 NTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPLELPSFSDKT---DENSQETI 1165

Query: 241  EAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKVFLKVAPMRGVLRFERRGKLSPRF 300
            +  Q ++  ++T   + K Y D++ +++ EF+ GD V +K     G L   +  KL+P F
Sbjct: 1166 QVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVK-RTKTGFL--HKSNKLAPSF 1225

Query: 301  VGPFEILERIGPVAYRLSLPPSLTTV-HDVFHVSMLRK 336
             GPF +L++ GP  Y L LP S+  +    FHVS L K
Sbjct: 1226 AGPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLEK 1256

[Close]

BLAST of Cmc10g0276431 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 1.7e-52
Identity = 117/338 (34.62%), Postives = 183/338 (54.14%), Query Frame = 0


Query: 1    MHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWE 60
            +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  WE
Sbjct: 926  IHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWE 985

Query: 61   NVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTACKWAQLYMSEIVRLHGVP 120
            ++SMDFIT LP +  G+  ++VVVDR +K A  VP   + TA + A+++   ++   G P
Sbjct: 986  SLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNP 1045

Query: 121  VSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFP 180
              I++D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR      P
Sbjct: 1046 KEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHP 1105

Query: 181  GSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWDEVGEQILMGPELVQSTN 240
             +W  H+ L++ +YNN+  +   M PFE ++      SP+      ++     E  Q T 
Sbjct: 1106 NTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPLELPSFSDKT---DENSQETI 1165

Query: 241  EAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKVFLKVAPMRGVLRFERRGKLSPRF 300
            +  Q ++  ++T   + K Y D++ +++ EF+ GD V +K     G L   +  KL+P F
Sbjct: 1166 QVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVK-RTKTGFL--HKSNKLAPSF 1225

Query: 301  VGPFEILERIGPVAYRLSLPPSLTTV-HDVFHVSMLRK 336
             GPF +L++ GP  Y L LP S+  +    FHVS L K
Sbjct: 1226 AGPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLEK 1256

[Close]

BLAST of Cmc10g0276431 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 1.7e-52
Identity = 117/338 (34.62%), Postives = 183/338 (54.14%), Query Frame = 0


Query: 1    MHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWE 60
            +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  WE
Sbjct: 926  IHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWE 985

Query: 61   NVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTACKWAQLYMSEIVRLHGVP 120
            ++SMDFIT LP +  G+  ++VVVDR +K A  VP   + TA + A+++   ++   G P
Sbjct: 986  SLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNP 1045

Query: 121  VSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFP 180
              I++D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR      P
Sbjct: 1046 KEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHP 1105

Query: 181  GSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWDEVGEQILMGPELVQSTN 240
             +W  H+ L++ +YNN+  +   M PFE ++      SP+      ++     E  Q T 
Sbjct: 1106 NTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPLELPSFSDKT---DENSQETI 1165

Query: 241  EAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKVFLKVAPMRGVLRFERRGKLSPRF 300
            +  Q ++  ++T   + K Y D++ +++ EF+ GD V +K     G L   +  KL+P F
Sbjct: 1166 QVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVK-RTKTGFL--HKSNKLAPSF 1225

Query: 301  VGPFEILERIGPVAYRLSLPPSLTTV-HDVFHVSMLRK 336
             GPF +L++ GP  Y L LP S+  +    FHVS L K
Sbjct: 1226 AGPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLEK 1256

[Close]

BLAST of Cmc10g0276431 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 1.7e-52
Identity = 117/338 (34.62%), Postives = 183/338 (54.14%), Query Frame = 0


Query: 1    MHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWE 60
            +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  WE
Sbjct: 926  IHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWE 985

Query: 61   NVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTACKWAQLYMSEIVRLHGVP 120
            ++SMDFIT LP +  G+  ++VVVDR +K A  VP   + TA + A+++   ++   G P
Sbjct: 986  SLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNP 1045

Query: 121  VSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFP 180
              I++D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR      P
Sbjct: 1046 KEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHP 1105

Query: 181  GSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWDEVGEQILMGPELVQSTN 240
             +W  H+ L++ +YNN+  +   M PFE ++      SP+      ++     E  Q T 
Sbjct: 1106 NTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPLELPSFSDKT---DENSQETI 1165

Query: 241  EAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKVFLKVAPMRGVLRFERRGKLSPRF 300
            +  Q ++  ++T   + K Y D++ +++ EF+ GD V +K     G L   +  KL+P F
Sbjct: 1166 QVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVK-RTKTGFL--HKSNKLAPSF 1225

Query: 301  VGPFEILERIGPVAYRLSLPPSLTTV-HDVFHVSMLRK 336
             GPF +L++ GP  Y L LP S+  +    FHVS L K
Sbjct: 1226 AGPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLEK 1256

[Close]

BLAST of Cmc10g0276431 vs. ExPASy Swiss-Prot
Match: P0CT36 (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-3 PE=1 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 1.7e-52
Identity = 117/338 (34.62%), Postives = 183/338 (54.14%), Query Frame = 0


Query: 1    MHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWE 60
            +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  WE
Sbjct: 926  IHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWE 985

Query: 61   NVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTACKWAQLYMSEIVRLHGVP 120
            ++SMDFIT LP +  G+  ++VVVDR +K A  VP   + TA + A+++   ++   G P
Sbjct: 986  SLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNP 1045

Query: 121  VSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFP 180
              I++D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR      P
Sbjct: 1046 KEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHP 1105

Query: 181  GSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWDEVGEQILMGPELVQSTN 240
             +W  H+ L++ +YNN+  +   M PFE ++      SP+      ++     E  Q T 
Sbjct: 1106 NTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPLELPSFSDKT---DENSQETI 1165

Query: 241  EAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKVFLKVAPMRGVLRFERRGKLSPRF 300
            +  Q ++  ++T   + K Y D++ +++ EF+ GD V +K     G L   +  KL+P F
Sbjct: 1166 QVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVK-RTKTGFL--HKSNKLAPSF 1225

Query: 301  VGPFEILERIGPVAYRLSLPPSLTTV-HDVFHVSMLRK 336
             GPF +L++ GP  Y L LP S+  +    FHVS L K
Sbjct: 1226 AGPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLEK 1256

[Close]

BLAST of Cmc10g0276431 vs. ExPASy TrEMBL
Match: A0A5A7UZZ4 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold137G00810 PE=4 SV=1)

HSP 1 Score: 683.7 bits (1763), Expect = 3.9e-193
Identity = 329/335 (98.21%), Postives = 331/335 (98.81%), Query Frame = 0


Query: 1   MHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWE 60
           MHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWE
Sbjct: 143 MHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWE 202

Query: 61  NVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTACKWAQLYMSEIVRLHGVP 120
           NVSMDFI GLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTA KWAQLYMSEIVRLHGVP
Sbjct: 203 NVSMDFIIGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVP 262

Query: 121 VSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFP 180
           VSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFP
Sbjct: 263 VSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFP 322

Query: 181 GSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWDEVGEQILMGPELVQSTNE 240
           GSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWDEVGEQ LMGPELVQSTNE
Sbjct: 323 GSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWDEVGEQRLMGPELVQSTNE 382

Query: 241 AIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVG 300
           AIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFE+RGKLSPRFVG
Sbjct: 383 AIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFEKRGKLSPRFVG 442

Query: 301 PFEILERIGPVAYRLSLPPSLTTVHDVFHVSMLRK 336
           PFEILERIGPVAYRL+LPPSLTT HDVFHVSMLRK
Sbjct: 443 PFEILERIGPVAYRLALPPSLTTAHDVFHVSMLRK 477

[Close]

BLAST of Cmc10g0276431 vs. ExPASy TrEMBL
Match: A0A5A7U7V9 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55G00950 PE=4 SV=1)

HSP 1 Score: 681.8 bits (1758), Expect = 1.5e-192
Identity = 327/335 (97.61%), Postives = 332/335 (99.10%), Query Frame = 0


Query: 1    MHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWE 60
            MHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWE
Sbjct: 1039 MHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWE 1098

Query: 61   NVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTACKWAQLYMSEIVRLHGVP 120
            NVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTA KWAQLYMSEIVRLHGVP
Sbjct: 1099 NVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVP 1158

Query: 121  VSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFP 180
            VSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFP
Sbjct: 1159 VSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFP 1218

Query: 181  GSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWDEVGEQILMGPELVQSTNE 240
            GSWDSHLHLMEFAYNNSYQATIGMAPFEALYG+CCRSPVCW EVGEQ LMGPELVQSTNE
Sbjct: 1219 GSWDSHLHLMEFAYNNSYQATIGMAPFEALYGRCCRSPVCWGEVGEQRLMGPELVQSTNE 1278

Query: 241  AIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVG 300
            AIQKIRSRMHTAQSRQKSYADVRRKDLEFE+GDKVFLKVAPM+GVLRFERRGKLSPRFVG
Sbjct: 1279 AIQKIRSRMHTAQSRQKSYADVRRKDLEFEIGDKVFLKVAPMKGVLRFERRGKLSPRFVG 1338

Query: 301  PFEILERIGPVAYRLSLPPSLTTVHDVFHVSMLRK 336
            PFEILERIGPVAYRL+LPPSL+TVHDVFHVSMLRK
Sbjct: 1339 PFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK 1373

[Close]

BLAST of Cmc10g0276431 vs. ExPASy TrEMBL
Match: A0A5A7TR61 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19461G00010 PE=4 SV=1)

HSP 1 Score: 681.8 bits (1758), Expect = 1.5e-192
Identity = 327/335 (97.61%), Postives = 332/335 (99.10%), Query Frame = 0


Query: 1   MHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWE 60
           MHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWE
Sbjct: 143 MHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWE 202

Query: 61  NVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTACKWAQLYMSEIVRLHGVP 120
           NVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTA KWAQLYMSEIVRLHGVP
Sbjct: 203 NVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVP 262

Query: 121 VSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFP 180
           VSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFP
Sbjct: 263 VSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFP 322

Query: 181 GSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWDEVGEQILMGPELVQSTNE 240
            SWDSHLHLMEFAYNNSYQATIGMAPFEALYG+CCRSPVCWDEVGEQ LMGPELVQSTNE
Sbjct: 323 DSWDSHLHLMEFAYNNSYQATIGMAPFEALYGRCCRSPVCWDEVGEQRLMGPELVQSTNE 382

Query: 241 AIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVG 300
           A+QKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPM+GVLRFERRGKLSPRFVG
Sbjct: 383 AVQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMKGVLRFERRGKLSPRFVG 442

Query: 301 PFEILERIGPVAYRLSLPPSLTTVHDVFHVSMLRK 336
           PFEILERIGPVAYRL+LPPSL+TVHDVFHVSMLRK
Sbjct: 443 PFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK 477

[Close]

BLAST of Cmc10g0276431 vs. ExPASy TrEMBL
Match: A0A5A7VJE2 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21G005560 PE=4 SV=1)

HSP 1 Score: 680.6 bits (1755), Expect = 3.3e-192
Identity = 327/335 (97.61%), Postives = 332/335 (99.10%), Query Frame = 0


Query: 1    MHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWE 60
            MHPGSTK+YQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWE
Sbjct: 1089 MHPGSTKIYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWE 1148

Query: 61   NVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTACKWAQLYMSEIVRLHGVP 120
            NVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTA KWAQLYMSEIVRLHGVP
Sbjct: 1149 NVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVP 1208

Query: 121  VSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFP 180
            VSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFP
Sbjct: 1209 VSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFP 1268

Query: 181  GSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWDEVGEQILMGPELVQSTNE 240
            GSWDSHLHLMEFAYNNSYQATIGMAPFEALYG+CCRSPVCW EVGEQ LMGPELVQSTNE
Sbjct: 1269 GSWDSHLHLMEFAYNNSYQATIGMAPFEALYGRCCRSPVCWGEVGEQRLMGPELVQSTNE 1328

Query: 241  AIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVG 300
            AIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGV+RFERRGKLSPRFVG
Sbjct: 1329 AIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVVRFERRGKLSPRFVG 1388

Query: 301  PFEILERIGPVAYRLSLPPSLTTVHDVFHVSMLRK 336
            PFEILERIGPVAYRL+LPPSL+TVHDVFHVSMLRK
Sbjct: 1389 PFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK 1423

[Close]

BLAST of Cmc10g0276431 vs. ExPASy TrEMBL
Match: A0A5A7SLT0 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold417G00090 PE=4 SV=1)

HSP 1 Score: 678.7 bits (1750), Expect = 1.2e-191
Identity = 328/335 (97.91%), Postives = 330/335 (98.51%), Query Frame = 0


Query: 1   MHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWE 60
           MHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWE
Sbjct: 78  MHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWE 137

Query: 61  NVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTACKWAQLYMSEIVRLHGVP 120
           NVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTA KWAQLYMSEIVRLHGVP
Sbjct: 138 NVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVP 197

Query: 121 VSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFP 180
           VSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFP
Sbjct: 198 VSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFP 257

Query: 181 GSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWDEVGEQILMGPELVQSTNE 240
           GSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCW EVGEQ LMG ELVQSTNE
Sbjct: 258 GSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGLELVQSTNE 317

Query: 241 AIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVG 300
           AIQKIRSRMHTAQSRQKSYADVRR DLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVG
Sbjct: 318 AIQKIRSRMHTAQSRQKSYADVRRNDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVG 377

Query: 301 PFEILERIGPVAYRLSLPPSLTTVHDVFHVSMLRK 336
           PFEILERIGPVAYRL+LPPSL+TVHDVFHVSMLRK
Sbjct: 378 PFEILERIGPVAYRLALPPSLSTVHDVFHVSMLRK 412

The following BLAST results are available for this feature:

BLAST of Cmc10g0276431 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0060848.1	8.0e-193	98.21	pol protein [Cucumis melo var. makuwa]	[more]
KAA0051368.1	3.0e-192	97.61	pol protein [Cucumis melo var. makuwa]	[more]
KAA0043669.1	3.0e-192	97.61	pol protein [Cucumis melo var. makuwa]	[more]
KAA0066456.1	6.8e-192	97.61	pol protein [Cucumis melo var. makuwa]	[more]
KAA0025425.1	2.6e-191	97.91	pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc10g0276431 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9UR07	1.7e-52	34.62	Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT41	1.7e-52	34.62	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	1.7e-52	34.62	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT35	1.7e-52	34.62	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT36	1.7e-52	34.62	Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Cmc10g0276431 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UZZ4	3.9e-193	98.21	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold137G00810 PE...	[more]
A0A5A7U7V9	1.5e-192	97.61	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55...	[more]
A0A5A7TR61	1.5e-192	97.61	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19461G00010 ...	[more]
A0A5A7VJE2	3.3e-192	97.61	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21...	[more]
A0A5A7SLT0	1.2e-191	97.91	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold417G00090 PE...	[more]

BLAST of Cmc10g0276431 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.340.70		coord: 1..39 e-value: 1.3E-11 score: 46.5
None	No IPR available	PANTHER	PTHR45835	YALI0A06105P	coord: 1..209
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 48..256 e-value: 1.1E-46 score: 160.6
IPR041588	Integrase zinc-binding domain	PFAM	PF17921	Integrase_H2C2	coord: 2..40 e-value: 2.1E-13 score: 50.1
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 51..214 score: 18.694326
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 52..211

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc10g0276431.1	Cmc10g0276431.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding