Cmc10g0275171 (gene) Melon (Charmono) v1.1

Overview
NameCmc10g0275171
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionGag/pol protein
LocationCMiso1.1chr10: 9083664 .. 9084797 (-)
RNA-Seq ExpressionCmc10g0275171
SyntenyCmc10g0275171
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATGTGAAGACTGCCTTTTTGAATGACAATCTTGAGAAGACCATCTATATGCAACAACCAGAAGGATTCATAATTCCAGGTCAAGAGCAACAGGTTTGCAAGCTTAATCGTTCTATTTATGGATTAAAACAAGCTTCTCGATCTTGGAACATAAGATTTGATATCGCAATAAAATCTTATGGATTTGATCAAATCGTTGATGAACCTTGTGTCTATAAAAGAATCATCAACAATTTAGTAGCTTTCTTAGTTCTGTACGTAGTTGATATCCTACTCATTGGGAATGATGTAGGTTTACTAACTGACATCAAACAATGGCTAGCAACCCAATTTCAAATGAAAGATTTGGGAGTGACACAGTTTGTTTTGGGTATTCAGATCTTTAGAGATCGTAAGAACAAAATGCTAGCTTTGTCTCAAGCATCGTATATTGACAAAATAGTTGTTAAATATTCAATGCAAAACTCCAAGAGAGGCTTACTACCTTTCAGGCATGAAGTTACTTTGTCTAAGGAACAGTGTCCTAAGACACCTCAAGACGTTGAGGAAATGAGACATATCCCCTATGCATCAGCTGTTGGCAGCTTGATGTATGTGATGTTATGTATTAGACCTCACATCTGTTATGCAGTGGGGATATTCAATAGATATCAATCTAATCTAGGATTAGCTCATTGGACTGCCGTTAAAACTATCCTCAAGTATCTTAGGAGAACGAGAGACTACATGCTTGTGTATGGTTCTAAGGATTTGATTCTTACAGGATACACAGACTCTGACTTTCAGACTGATAGAGATTCTAGGAAATCTACTTCAGGTTCAGTGTTCACTCTTAACGGAGGAGCTGTAGTTTGGAGAAGTATCAAGCAAGGATGTATTGCTGACTCCACTATGGAGGCAGAGTATGTTGCAGCTTGTGAAGCTGCCAAAGAGGCTGTTTGGCTTAGAAAATTCTTGATTGATTTGAAAGTAGTTCCAAACATGTCAAAGCCAATTACTCTTTACTATGATAATAGTGGCGCTGTGGCTAATTCTAGGGAGCCCAGAAGCCACAAGCGTGGACAACATATTGAACGCAAGTATCACTTGATTCGAGAGATAGTGCATCGAAGGGACGTGATCGTCACATAG

mRNA sequence

ATGGATGTGAAGACTGCCTTTTTGAATGACAATCTTGAGAAGACCATCTATATGCAACAACCAGAAGGATTCATAATTCCAGGTCAAGAGCAACAGGTTTGCAAGCTTAATCGTTCTATTTATGGATTAAAACAAGCTTCTCGATCTTGGAACATAAGATTTGATATCGCAATAAAATCTTATGGATTTGATCAAATCGTTGATGAACCTTGTGTCTATAAAAGAATCATCAACAATTTAGTAGCTTTCTTAGTTCTGTACGTAGTTGATATCCTACTCATTGGGAATGATGTAGGTTTACTAACTGACATCAAACAATGGCTAGCAACCCAATTTCAAATGAAAGATTTGGGAGTGACACAGTTTGTTTTGGGTATTCAGATCTTTAGAGATCGTAAGAACAAAATGCTAGCTTTGTCTCAAGCATCGTATATTGACAAAATAGTTGTTAAATATTCAATGCAAAACTCCAAGAGAGGCTTACTACCTTTCAGGCATGAAGTTACTTTGTCTAAGGAACAGTGTCCTAAGACACCTCAAGACGTTGAGGAAATGAGACATATCCCCTATGCATCAGCTGTTGGCAGCTTGATGTATGTGATGTTATGTATTAGACCTCACATCTGTTATGCAGTGGGGATATTCAATAGATATCAATCTAATCTAGGATTAGCTCATTGGACTGCCGTTAAAACTATCCTCAAGTATCTTAGGAGAACGAGAGACTACATGCTTGTGTATGGTTCTAAGGATTTGATTCTTACAGGATACACAGACTCTGACTTTCAGACTGATAGAGATTCTAGGAAATCTACTTCAGGTTCAGTGTTCACTCTTAACGGAGGAGCTGTAGTTTGGAGAAGTATCAAGCAAGGATGTATTGCTGACTCCACTATGGAGGCAGAGTATGTTGCAGCTTGTGAAGCTGCCAAAGAGGCTGTTTGGCTTAGAAAATTCTTGATTGATTTGAAAGTAGTTCCAAACATGTCAAAGCCAATTACTCTTTACTATGATAATAGTGGCGCTGTGGCTAATTCTAGGGAGCCCAGAAGCCACAAGCGTGGACAACATATTGAACGCAAGTATCACTTGATTCGAGAGATAGTGCATCGAAGGGACGTGATCGTCACATAG

Coding sequence (CDS)

ATGGATGTGAAGACTGCCTTTTTGAATGACAATCTTGAGAAGACCATCTATATGCAACAACCAGAAGGATTCATAATTCCAGGTCAAGAGCAACAGGTTTGCAAGCTTAATCGTTCTATTTATGGATTAAAACAAGCTTCTCGATCTTGGAACATAAGATTTGATATCGCAATAAAATCTTATGGATTTGATCAAATCGTTGATGAACCTTGTGTCTATAAAAGAATCATCAACAATTTAGTAGCTTTCTTAGTTCTGTACGTAGTTGATATCCTACTCATTGGGAATGATGTAGGTTTACTAACTGACATCAAACAATGGCTAGCAACCCAATTTCAAATGAAAGATTTGGGAGTGACACAGTTTGTTTTGGGTATTCAGATCTTTAGAGATCGTAAGAACAAAATGCTAGCTTTGTCTCAAGCATCGTATATTGACAAAATAGTTGTTAAATATTCAATGCAAAACTCCAAGAGAGGCTTACTACCTTTCAGGCATGAAGTTACTTTGTCTAAGGAACAGTGTCCTAAGACACCTCAAGACGTTGAGGAAATGAGACATATCCCCTATGCATCAGCTGTTGGCAGCTTGATGTATGTGATGTTATGTATTAGACCTCACATCTGTTATGCAGTGGGGATATTCAATAGATATCAATCTAATCTAGGATTAGCTCATTGGACTGCCGTTAAAACTATCCTCAAGTATCTTAGGAGAACGAGAGACTACATGCTTGTGTATGGTTCTAAGGATTTGATTCTTACAGGATACACAGACTCTGACTTTCAGACTGATAGAGATTCTAGGAAATCTACTTCAGGTTCAGTGTTCACTCTTAACGGAGGAGCTGTAGTTTGGAGAAGTATCAAGCAAGGATGTATTGCTGACTCCACTATGGAGGCAGAGTATGTTGCAGCTTGTGAAGCTGCCAAAGAGGCTGTTTGGCTTAGAAAATTCTTGATTGATTTGAAAGTAGTTCCAAACATGTCAAAGCCAATTACTCTTTACTATGATAATAGTGGCGCTGTGGCTAATTCTAGGGAGCCCAGAAGCCACAAGCGTGGACAACATATTGAACGCAAGTATCACTTGATTCGAGAGATAGTGCATCGAAGGGACGTGATCGTCACATAG

Protein sequence

MDVKTAFLNDNLEKTIYMQQPEGFIIPGQEQQVCKLNRSIYGLKQASRSWNIRFDIAIKSYGFDQIVDEPCVYKRIINNLVAFLVLYVVDILLIGNDVGLLTDIKQWLATQFQMKDLGVTQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHEVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYVMLCIRPHICYAVGIFNRYQSNLGLAHWTAVKTILKYLRRTRDYMLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRKFLIDLKVVPNMSKPITLYYDNSGAVANSREPRSHKRGQHIERKYHLIREIVHRRDVIVT
Homology
BLAST of Cmc10g0275171 vs. NCBI nr
Match: KAA0037371.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 718.4 bits (1853), Expect = 3.3e-203
Identity = 361/374 (96.52%), Postives = 365/374 (97.59%), Query Frame = 0

Query: 4   KTAFLNDNLEKTIYMQQPEGFIIPGQEQQVCKLNRSIYGLKQASRSWNIRFDIAIKSYGF 63
           +TAFLNDNLE+TIYMQQPEG II GQEQQVCKLNRSIYGLKQASRSWNIRFD AIKSYGF
Sbjct: 566 ETAFLNDNLEETIYMQQPEGSIILGQEQQVCKLNRSIYGLKQASRSWNIRFDTAIKSYGF 625

Query: 64  DQIVDEPCVYKRIINNLVAFLVLYVVDILLIGNDVGLLTDIKQWLATQFQMKDLGVTQFV 123
           DQIVDEPCVYKRIINNLVAFLVLYVVDILLIGNDVGLLTDIKQWLATQFQMKDLGVTQFV
Sbjct: 626 DQIVDEPCVYKRIINNLVAFLVLYVVDILLIGNDVGLLTDIKQWLATQFQMKDLGVTQFV 685

Query: 124 LGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHEVTLSKEQCPKTPQDVE 183
           LGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHEVTLSKEQCPKTPQD+E
Sbjct: 686 LGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHEVTLSKEQCPKTPQDIE 745

Query: 184 EMRHIPYASAVGSLMYVMLCIRPHICYAVGIFNRYQSNLGLAHWTAVKTILKYLRRTRDY 243
           EMRHIPYASAVGSLMYVMLCIRPHICYAVGIF+RYQSNLGLAHWT VKTILKYLRRTRDY
Sbjct: 746 EMRHIPYASAVGSLMYVMLCIRPHICYAVGIFSRYQSNLGLAHWTTVKTILKYLRRTRDY 805

Query: 244 MLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEY 303
           MLVYGSKDLIL GYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEY
Sbjct: 806 MLVYGSKDLILIGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEY 865

Query: 304 VAACEAAKEAVWLRKFLIDLKVVPNMSKPITLYYDNSGAVANSREPRSHKRGQHIERKYH 363
           VAACE AKEAVWLRKFLIDLKVVPNMSKPITLYY NSGAVANSREPRSHKRGQHIE KYH
Sbjct: 866 VAACEVAKEAVWLRKFLIDLKVVPNMSKPITLYYVNSGAVANSREPRSHKRGQHIECKYH 925

Query: 364 LIREIVHRRDVIVT 378
           LIREIVHR DVIVT
Sbjct: 926 LIREIVHRGDVIVT 939

BLAST of Cmc10g0275171 vs. NCBI nr
Match: TYJ97618.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 702.6 bits (1812), Expect = 1.9e-198
Identity = 353/377 (93.63%), Postives = 360/377 (95.49%), Query Frame = 0

Query: 1    MDVKTAFLNDNLEKTIYMQQPEGFIIPGQEQQVCKLNRSIYGLKQASRSWNIRFDIAIKS 60
            MDVKTAFLN NLE+TIYMQQPEGFIIPGQEQ++CKLNRSIYGLKQASRSWNIRFD AIKS
Sbjct: 715  MDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKS 774

Query: 61   YGFDQIVDEPCVYKRIINNLVAFLVLYVVDILLIGNDVGLLTDIKQWLATQFQMKDLGVT 120
            YGFDQIVDEPCVYKRIIN  VAFLVLYV DILLIGND+GLLTDIKQWLATQFQMKDLG  
Sbjct: 775  YGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDIKQWLATQFQMKDLGEA 834

Query: 121  QFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHEVTLSKEQCPKTPQ 180
            QFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRH VTLSKEQCPKTPQ
Sbjct: 835  QFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQ 894

Query: 181  DVEEMRHIPYASAVGSLMYVMLCIRPHICYAVGIFNRYQSNLGLAHWTAVKTILKYLRRT 240
            DVEEMRHIPYASAVGSLMY MLC RP ICYAVGI +RYQSN GLAHWTAVKTILKYLRRT
Sbjct: 895  DVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTILKYLRRT 954

Query: 241  RDYMLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTME 300
            RDY LVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTME
Sbjct: 955  RDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTME 1014

Query: 301  AEYVAACEAAKEAVWLRKFLIDLKVVPNMSKPITLYYDNSGAVANSREPRSHKRGQHIER 360
            AEYVAACEAAKEAVWLR FLIDL+VVPNMSKPITLY DNSGAVANSREPRSHKRG+HIER
Sbjct: 1015 AEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIER 1074

Query: 361  KYHLIREIVHRRDVIVT 378
            KYHLIREIVHR DVIVT
Sbjct: 1075 KYHLIREIVHRGDVIVT 1091

BLAST of Cmc10g0275171 vs. NCBI nr
Match: KAA0048404.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 702.6 bits (1812), Expect = 1.9e-198
Identity = 353/377 (93.63%), Postives = 360/377 (95.49%), Query Frame = 0

Query: 1    MDVKTAFLNDNLEKTIYMQQPEGFIIPGQEQQVCKLNRSIYGLKQASRSWNIRFDIAIKS 60
            MDVKTAFLN NLE+TIYMQQPEGFIIPGQEQ++CKLNRSIYGLKQASRSWNIRFD AIKS
Sbjct: 929  MDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKS 988

Query: 61   YGFDQIVDEPCVYKRIINNLVAFLVLYVVDILLIGNDVGLLTDIKQWLATQFQMKDLGVT 120
            YGFDQIVDEPCVYKRIIN  VAFLVLYV DILLIGND+GLLTDIKQWLATQFQMKDLG  
Sbjct: 989  YGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDIKQWLATQFQMKDLGEA 1048

Query: 121  QFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHEVTLSKEQCPKTPQ 180
            QFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRH VTLSKEQCPKTPQ
Sbjct: 1049 QFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQ 1108

Query: 181  DVEEMRHIPYASAVGSLMYVMLCIRPHICYAVGIFNRYQSNLGLAHWTAVKTILKYLRRT 240
            DVEEMRHIPYASAVGSLMY MLC RP ICYAVGI +RYQSN GLAHWTAVKTILKYLRRT
Sbjct: 1109 DVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTILKYLRRT 1168

Query: 241  RDYMLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTME 300
            RDY LVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTME
Sbjct: 1169 RDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTME 1228

Query: 301  AEYVAACEAAKEAVWLRKFLIDLKVVPNMSKPITLYYDNSGAVANSREPRSHKRGQHIER 360
            AEYVAACEAAKEAVWLR FLIDL+VVPNMSKPITLY DNSGAVANSREPRSHKRG+HIER
Sbjct: 1229 AEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIER 1288

Query: 361  KYHLIREIVHRRDVIVT 378
            KYHLIREIVHR DVIVT
Sbjct: 1289 KYHLIREIVHRGDVIVT 1305

BLAST of Cmc10g0275171 vs. NCBI nr
Match: TYK14550.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 702.6 bits (1812), Expect = 1.9e-198
Identity = 353/377 (93.63%), Postives = 360/377 (95.49%), Query Frame = 0

Query: 1    MDVKTAFLNDNLEKTIYMQQPEGFIIPGQEQQVCKLNRSIYGLKQASRSWNIRFDIAIKS 60
            MDVKTAFLN NLE+TIYMQQPEGFIIPGQEQ++CKLNRSIYGLKQASRSWNIRFD AIKS
Sbjct: 930  MDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKS 989

Query: 61   YGFDQIVDEPCVYKRIINNLVAFLVLYVVDILLIGNDVGLLTDIKQWLATQFQMKDLGVT 120
            YGFDQIVDEPCVYKRIIN  VAFLVLYV DILLIGND+GLLTDIKQWLATQFQMKDLG  
Sbjct: 990  YGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDIKQWLATQFQMKDLGEA 1049

Query: 121  QFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHEVTLSKEQCPKTPQ 180
            QFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRH VTLSKEQCPKTPQ
Sbjct: 1050 QFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQ 1109

Query: 181  DVEEMRHIPYASAVGSLMYVMLCIRPHICYAVGIFNRYQSNLGLAHWTAVKTILKYLRRT 240
            DVEEMRHIPYASAVGSLMY MLC RP ICYAVGI +RYQSN GLAHWTAVKTILKYLRRT
Sbjct: 1110 DVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTILKYLRRT 1169

Query: 241  RDYMLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTME 300
            RDY LVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTME
Sbjct: 1170 RDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTME 1229

Query: 301  AEYVAACEAAKEAVWLRKFLIDLKVVPNMSKPITLYYDNSGAVANSREPRSHKRGQHIER 360
            AEYVAACEAAKEAVWLR FLIDL+VVPNMSKPITLY DNSGAVANSREPRSHKRG+HIER
Sbjct: 1230 AEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIER 1289

Query: 361  KYHLIREIVHRRDVIVT 378
            KYHLIREIVHR DVIVT
Sbjct: 1290 KYHLIREIVHRGDVIVT 1306

BLAST of Cmc10g0275171 vs. NCBI nr
Match: KAA0054490.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 702.6 bits (1812), Expect = 1.9e-198
Identity = 353/377 (93.63%), Postives = 360/377 (95.49%), Query Frame = 0

Query: 1    MDVKTAFLNDNLEKTIYMQQPEGFIIPGQEQQVCKLNRSIYGLKQASRSWNIRFDIAIKS 60
            MDVKTAFLN NLE+TIYMQQPEGFIIPGQEQ++CKLNRSIYGLKQASRSWNIRFD AIKS
Sbjct: 930  MDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKS 989

Query: 61   YGFDQIVDEPCVYKRIINNLVAFLVLYVVDILLIGNDVGLLTDIKQWLATQFQMKDLGVT 120
            YGFDQIVDEPCVYKRIIN  VAFLVLYV DILLIGND+GLLTDIKQWLATQFQMKDLG  
Sbjct: 990  YGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDIKQWLATQFQMKDLGEA 1049

Query: 121  QFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHEVTLSKEQCPKTPQ 180
            QFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRH VTLSKEQCPKTPQ
Sbjct: 1050 QFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQ 1109

Query: 181  DVEEMRHIPYASAVGSLMYVMLCIRPHICYAVGIFNRYQSNLGLAHWTAVKTILKYLRRT 240
            DVEEMRHIPYASAVGSLMY MLC RP ICYAVGI +RYQSN GLAHWTAVKTILKYLRRT
Sbjct: 1110 DVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTILKYLRRT 1169

Query: 241  RDYMLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTME 300
            RDY LVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTME
Sbjct: 1170 RDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTME 1229

Query: 301  AEYVAACEAAKEAVWLRKFLIDLKVVPNMSKPITLYYDNSGAVANSREPRSHKRGQHIER 360
            AEYVAACEAAKEAVWLR FLIDL+VVPNMSKPITLY DNSGAVANSREPRSHKRG+HIER
Sbjct: 1230 AEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIER 1289

Query: 361  KYHLIREIVHRRDVIVT 378
            KYHLIREIVHR DVIVT
Sbjct: 1290 KYHLIREIVHRGDVIVT 1306

BLAST of Cmc10g0275171 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 339.3 bits (869), Expect = 5.4e-92
Identity = 173/370 (46.76%), Postives = 247/370 (66.76%), Query Frame = 0

Query: 1    MDVKTAFLNDNLEKTIYMQQPEGFIIPGQEQQVCKLNRSIYGLKQASRSWNIRFDIAIKS 60
            +DVKTAFL+ +LE+ IYM+QPEGF + G++  VCKLN+S+YGLKQA R W ++FD  +KS
Sbjct: 921  LDVKTAFLHGDLEEEIYMEQPEGFEVAGKKHMVCKLNKSLYGLKQAPRQWYMKFDSFMKS 980

Query: 61   YGFDQIVDEPCVY-KRIINNLVAFLVLYVVDILLIGNDVGLLTDIKQWLATQFQMKDLGV 120
              + +   +PCVY KR   N    L+LYV D+L++G D GL+  +K  L+  F MKDLG 
Sbjct: 981  QTYLKTYSDPCVYFKRFSENNFIILLLYVDDMLIVGKDKGLIAKLKGDLSKSFDMKDLGP 1040

Query: 121  TQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHEVTLSKEQCPKTP 180
             Q +LG++I R+R ++ L LSQ  YI++++ +++M+N+K    P    + LSK+ CP T 
Sbjct: 1041 AQQILGMKIVRERTSRKLWLSQEKYIERVLERFNMKNAKPVSTPLAGHLKLSKKMCPTTV 1100

Query: 181  QDVEEMRHIPYASAVGSLMYVMLCIRPHICYAVGIFNRYQSNLGLAHWTAVKTILKYLRR 240
            ++   M  +PY+SAVGSLMY M+C RP I +AVG+ +R+  N G  HW AVK IL+YLR 
Sbjct: 1101 EEKGNMAKVPYSSAVGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWILRYLRG 1160

Query: 241  TRDYMLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTM 300
            T    L +G  D IL GYTD+D   D D+RKS++G +FT +GGA+ W+S  Q C+A ST 
Sbjct: 1161 TTGDCLCFGGSDPILKGYTDADMAGDIDNRKSSTGYLFTFSGGAISWQSKLQKCVALSTT 1220

Query: 301  EAEYVAACEAAKEAVWLRKFLIDLKVVPNMSKPITLYYDNSGAVANSREPRSHKRGQHIE 360
            EAEY+AA E  KE +WL++FL +L +     K   +Y D+  A+  S+    H R +HI+
Sbjct: 1221 EAEYIAATETGKEMIWLKRFLQELGL---HQKEYVVYCDSQSAIDLSKNSMYHARTKHID 1280

Query: 361  RKYHLIREIV 370
             +YH IRE+V
Sbjct: 1281 VRYHWIREMV 1287

BLAST of Cmc10g0275171 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 226.9 bits (577), Expect = 3.9e-58
Identity = 139/381 (36.48%), Postives = 215/381 (56.43%), Query Frame = 0

Query: 1    MDVKTAFLNDNLEKTIYMQQPEGFIIPGQEQQVCKLNRSIYGLKQASRSWNIRFDIAIKS 60
            MDVKTAFLN  L++ IYM+ P+G  I      VCKLN++IYGLKQA+R W   F+ A+K 
Sbjct: 1001 MDVKTAFLNGTLKEEIYMRLPQG--ISCNSDNVCKLNKAIYGLKQAARCWFEVFEQALKE 1060

Query: 61   YGFDQIVDEPCVY---KRIINNLVAFLVLYVVDILLIGNDVGLLTDIKQWLATQFQMKDL 120
              F     + C+Y   K  IN  + +++LYV D+++   D+  + + K++L  +F+M DL
Sbjct: 1061 CEFVNSSVDRCIYILDKGNINENI-YVLLYVDDVVIATGDMTRMNNFKRYLMEKFRMTDL 1120

Query: 121  GVTQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLP----FRHEVTLSKE 180
               +  +GI+I  + +   + LSQ++Y+ KI+ K++M+N      P      +E+  S E
Sbjct: 1121 NEIKHFIGIRI--EMQEDKIYLSQSAYVKKILSKFNMENCNAVSTPLPSKINYELLNSDE 1180

Query: 181  QCPKTPQDVEEMRHIPYASAVGSLMYVMLCIRPHICYAVGIFNRYQSNLGLAHWTAVKTI 240
             C           + P  S +G LMY+MLC RP +  AV I +RY S      W  +K +
Sbjct: 1181 DC-----------NTPCRSLIGCLMYIMLCTRPDLTTAVNILSRYSSKNNSELWQNLKRV 1240

Query: 241  LKYLRRTRDYMLVYGSKDLI----LTGYTDSDFQTDRDSRKSTSGSVFTL-NGGAVVWRS 300
            L+YL+ T D  L++  K+L     + GY DSD+      RKST+G +F + +   + W +
Sbjct: 1241 LRYLKGTIDMKLIF-KKNLAFENKIIGYVDSDWAGSEIDRKSTTGYLFKMFDFNLICWNT 1300

Query: 301  IKQGCIADSTMEAEYVAACEAAKEAVWLRKFLIDLKVVPNMSKPITLYYDNSGAVANSRE 360
             +Q  +A S+ EAEY+A  EA +EA+WL+  L  + +   +  PI +Y DN G ++ +  
Sbjct: 1301 KRQNSVAASSTEAEYMALFEAVREALWLKFLLTSINI--KLENPIKIYEDNQGCISIANN 1360

Query: 361  PRSHKRGQHIERKYHLIREIV 370
            P  HKR +HI+ KYH  RE V
Sbjct: 1361 PSCHKRAKHIDIKYHFAREQV 1362

BLAST of Cmc10g0275171 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 6.1e-43
Identity = 117/370 (31.62%), Postives = 177/370 (47.84%), Query Frame = 0

Query: 1    MDVKTAFLNDNLEKTIYMQQPEGFIIPGQEQQVCKLNRSIYGLKQASRSWNIRFDIAIKS 60
            +DV  AFL   L   +YM QP GF+   +   VC+L ++IYGLKQA R+W +     + +
Sbjct: 1047 LDVNNAFLQGTLTDEVYMSQPPGFVDKDRPDYVCRLRKAIYGLKQAPRAWYVELRTYLLT 1106

Query: 61   YGFDQIVDEPCVYKRIINNLVAFLVLYVVDILLIGNDVGLLTDIKQWLATQFQMKDLGVT 120
             GF   + +  ++       + ++++YV DIL+ GND  LL      L+ +F +K+    
Sbjct: 1107 VGFVNSISDTSLFVLQRGRSIIYMLVYVDDILITGNDTVLLKHTLDALSQRFSVKEHEDL 1166

Query: 121  QFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHEVTLSKEQCPKTPQ 180
             + LGI+    R  + L LSQ  Y   ++ + +M  +K    P      L+     K P 
Sbjct: 1167 HYFLGIE--AKRVPQGLHLSQRRYTLDLLARTNMLTAKPVATPMATSPKLTLHSGTKLPD 1226

Query: 181  DVEEMRHIPYASAVGSLMYVMLCIRPHICYAVGIFNRYQSNLGLAHWTAVKTILKYLRRT 240
              E      Y   VGSL Y+    RP + YAV   ++Y       HW A+K +L+YL  T
Sbjct: 1227 PTE------YRGIVGSLQYLAF-TRPDLSYAVNRLSQYMHMPTDDHWNALKRVLRYLAGT 1286

Query: 241  RDY-MLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTM 300
             D+ + +     L L  Y+D+D+  D D   ST+G +  L    + W S KQ  +  S+ 
Sbjct: 1287 PDHGIFLKKGNTLSLHAYSDADWAGDTDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSST 1346

Query: 301  EAEYVAACEAAKEAVWLRKFLIDLKVVPNMSKPITLYYDNSGAVANSREPRSHKRGQHIE 360
            EAEY +    + E  W+   L +L +   +S P  +Y DN GA      P  H R +HI 
Sbjct: 1347 EAEYRSVANTSSELQWICSLLTELGI--QLSHPPVIYCDNVGATYLCANPVFHSRMKHIA 1405

Query: 361  RKYHLIREIV 370
              YH IR  V
Sbjct: 1407 LDYHFIRNQV 1405

BLAST of Cmc10g0275171 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 3.3e-41
Identity = 119/370 (32.16%), Postives = 178/370 (48.11%), Query Frame = 0

Query: 1    MDVKTAFLNDNLEKTIYMQQPEGFIIPGQEQQVCKLNRSIYGLKQASRSWNIRFDIAIKS 60
            +DV  AFL   L   +YM QP GFI   +   VCKL +++YGLKQA R+W +     + +
Sbjct: 1064 LDVNNAFLQGTLTDDVYMSQPPGFIDKDRPNYVCKLRKALYGLKQAPRAWYVELRNYLLT 1123

Query: 61   YGFDQIVDEPCVYKRIINNLVAFLVLYVVDILLIGNDVGLLTDIKQWLATQFQMKDLGVT 120
             GF   V +  ++       + ++++YV DIL+ GND  LL +    L+ +F +KD    
Sbjct: 1124 IGFVNSVSDTSLFVLQRGKSIVYMLVYVDDILITGNDPTLLHNTLDNLSQRFSVKDHEEL 1183

Query: 121  QFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHEVTLSKEQCPKTPQ 180
             + LGI+    R    L LSQ  YI  ++ + +M  +K    P      LS     K   
Sbjct: 1184 HYFLGIE--AKRVPTGLHLSQRRYILDLLARTNMITAKPVTTPMAPSPKLSLYSGTKLTD 1243

Query: 181  DVEEMRHIPYASAVGSLMYVMLCIRPHICYAVGIFNRYQSNLGLAHWTAVKTILKYLRRT 240
              E      Y   VGSL Y+    RP I YAV   +++       H  A+K IL+YL  T
Sbjct: 1244 PTE------YRGIVGSLQYLAF-TRPDISYAVNRLSQFMHMPTEEHLQALKRILRYLAGT 1303

Query: 241  RDY-MLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTM 300
             ++ + +     L L  Y+D+D+  D+D   ST+G +  L    + W S KQ  +  S+ 
Sbjct: 1304 PNHGIFLKKGNTLSLHAYSDADWAGDKDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSST 1363

Query: 301  EAEYVAACEAAKEAVWLRKFLIDLKVVPNMSKPITLYYDNSGAVANSREPRSHKRGQHIE 360
            EAEY +    + E  W+   L +L +   +++P  +Y DN GA      P  H R +HI 
Sbjct: 1364 EAEYRSVANTSSEMQWICSLLTELGI--RLTRPPVIYCDNVGATYLCANPVFHSRMKHIA 1422

Query: 361  RKYHLIREIV 370
              YH IR  V
Sbjct: 1424 IDYHFIRNQV 1422

BLAST of Cmc10g0275171 vs. ExPASy Swiss-Prot
Match: P25600 (Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY5A PE=5 SV=2)

HSP 1 Score: 138.7 bits (348), Expect = 1.4e-31
Identity = 102/314 (32.48%), Postives = 146/314 (46.50%), Query Frame = 0

Query: 1   MDVKTAFLNDNLEKTIYMQQPEGFIIPGQEQQVCKLNRSIYGLKQASRSWNIRFDIAIKS 60
           MDV TAFLN  +++ IY++QP GF+       V +L   +YGLKQA   WN   +  +K 
Sbjct: 1   MDVDTAFLNSTMDEPIYVKQPPGFVNERNPDYVWELYGGMYGLKQAPLLWNEHINNTLKK 60

Query: 61  YGFDQIVDEPCVYKRIINNLVAFLVLYVVDILLIGNDVGLLTDIKQWLATQFQMKDLGVT 120
            GF +   E  +Y R  ++   ++ +YV D+L+      +   +KQ L   + MKDLG  
Sbjct: 61  IGFCRHEGEHGLYFRSTSDGPIYIAVYVDDLLVAAPSPKIYDRVKQELTKLYSMKDLGKV 120

Query: 121 QFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHEVTLSKEQCPKTPQ 180
              LG+ I +   N  + LS   YI K   +  +   K    P  +   L +   P   +
Sbjct: 121 DKFLGLNIHQS-SNGDITLSLQDYIAKAASESEINTFKLTQTPLCNSKPLFETTSPHL-K 180

Query: 181 DVEEMRHIPYASAVGSLMYVMLCIRPHICYAVGIFNRYQSNLGLAHWTAVKTILKYLRRT 240
           D+      PY S VG L++     RP I Y V + +R+       H  + + +L+YL  T
Sbjct: 181 DI-----TPYQSIVGQLLFCANTGRPDISYPVSLLSRFLREPRAIHLESARRVLRYLYTT 240

Query: 241 RDYMLVYGS-KDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIK-QGCIADST 300
           R   L Y S   L LT Y D+      D   ST G V  L G  V W S K +G I   +
Sbjct: 241 RSMCLKYRSGSQLALTVYCDASHGAIHDLPHSTGGYVTLLAGAPVTWSSKKLKGVIPVPS 300

Query: 301 MEAEYVAACEAAKE 313
            EAEY+ A E   E
Sbjct: 301 TEAEYITASETVME 307

BLAST of Cmc10g0275171 vs. ExPASy TrEMBL
Match: A0A5A7T706 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold278G00760 PE=4 SV=1)

HSP 1 Score: 718.4 bits (1853), Expect = 1.6e-203
Identity = 361/374 (96.52%), Postives = 365/374 (97.59%), Query Frame = 0

Query: 4   KTAFLNDNLEKTIYMQQPEGFIIPGQEQQVCKLNRSIYGLKQASRSWNIRFDIAIKSYGF 63
           +TAFLNDNLE+TIYMQQPEG II GQEQQVCKLNRSIYGLKQASRSWNIRFD AIKSYGF
Sbjct: 566 ETAFLNDNLEETIYMQQPEGSIILGQEQQVCKLNRSIYGLKQASRSWNIRFDTAIKSYGF 625

Query: 64  DQIVDEPCVYKRIINNLVAFLVLYVVDILLIGNDVGLLTDIKQWLATQFQMKDLGVTQFV 123
           DQIVDEPCVYKRIINNLVAFLVLYVVDILLIGNDVGLLTDIKQWLATQFQMKDLGVTQFV
Sbjct: 626 DQIVDEPCVYKRIINNLVAFLVLYVVDILLIGNDVGLLTDIKQWLATQFQMKDLGVTQFV 685

Query: 124 LGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHEVTLSKEQCPKTPQDVE 183
           LGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHEVTLSKEQCPKTPQD+E
Sbjct: 686 LGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHEVTLSKEQCPKTPQDIE 745

Query: 184 EMRHIPYASAVGSLMYVMLCIRPHICYAVGIFNRYQSNLGLAHWTAVKTILKYLRRTRDY 243
           EMRHIPYASAVGSLMYVMLCIRPHICYAVGIF+RYQSNLGLAHWT VKTILKYLRRTRDY
Sbjct: 746 EMRHIPYASAVGSLMYVMLCIRPHICYAVGIFSRYQSNLGLAHWTTVKTILKYLRRTRDY 805

Query: 244 MLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEY 303
           MLVYGSKDLIL GYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEY
Sbjct: 806 MLVYGSKDLILIGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEY 865

Query: 304 VAACEAAKEAVWLRKFLIDLKVVPNMSKPITLYYDNSGAVANSREPRSHKRGQHIERKYH 363
           VAACE AKEAVWLRKFLIDLKVVPNMSKPITLYY NSGAVANSREPRSHKRGQHIE KYH
Sbjct: 866 VAACEVAKEAVWLRKFLIDLKVVPNMSKPITLYYVNSGAVANSREPRSHKRGQHIECKYH 925

Query: 364 LIREIVHRRDVIVT 378
           LIREIVHR DVIVT
Sbjct: 926 LIREIVHRGDVIVT 939

BLAST of Cmc10g0275171 vs. ExPASy TrEMBL
Match: A0A5A7SMH8 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G002560 PE=4 SV=1)

HSP 1 Score: 702.6 bits (1812), Expect = 9.0e-199
Identity = 353/377 (93.63%), Postives = 360/377 (95.49%), Query Frame = 0

Query: 1    MDVKTAFLNDNLEKTIYMQQPEGFIIPGQEQQVCKLNRSIYGLKQASRSWNIRFDIAIKS 60
            MDVKTAFLN NLE+TIYMQQPEGFIIPGQEQ++CKLNRSIYGLKQASRSWNIRFD AIKS
Sbjct: 930  MDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKS 989

Query: 61   YGFDQIVDEPCVYKRIINNLVAFLVLYVVDILLIGNDVGLLTDIKQWLATQFQMKDLGVT 120
            YGFDQIVDEPCVYKRIIN  VAFLVLYV DILLIGND+GLLTDIKQWLATQFQMKDLG  
Sbjct: 990  YGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDIKQWLATQFQMKDLGEA 1049

Query: 121  QFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHEVTLSKEQCPKTPQ 180
            QFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRH VTLSKEQCPKTPQ
Sbjct: 1050 QFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQ 1109

Query: 181  DVEEMRHIPYASAVGSLMYVMLCIRPHICYAVGIFNRYQSNLGLAHWTAVKTILKYLRRT 240
            DVEEMRHIPYASAVGSLMY MLC RP ICYAVGI +RYQSN GLAHWTAVKTILKYLRRT
Sbjct: 1110 DVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTILKYLRRT 1169

Query: 241  RDYMLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTME 300
            RDY LVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTME
Sbjct: 1170 RDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTME 1229

Query: 301  AEYVAACEAAKEAVWLRKFLIDLKVVPNMSKPITLYYDNSGAVANSREPRSHKRGQHIER 360
            AEYVAACEAAKEAVWLR FLIDL+VVPNMSKPITLY DNSGAVANSREPRSHKRG+HIER
Sbjct: 1230 AEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIER 1289

Query: 361  KYHLIREIVHRRDVIVT 378
            KYHLIREIVHR DVIVT
Sbjct: 1290 KYHLIREIVHRGDVIVT 1306

BLAST of Cmc10g0275171 vs. ExPASy TrEMBL
Match: A0A5D3CPJ6 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G00040 PE=4 SV=1)

HSP 1 Score: 702.6 bits (1812), Expect = 9.0e-199
Identity = 353/377 (93.63%), Postives = 360/377 (95.49%), Query Frame = 0

Query: 1    MDVKTAFLNDNLEKTIYMQQPEGFIIPGQEQQVCKLNRSIYGLKQASRSWNIRFDIAIKS 60
            MDVKTAFLN NLE+TIYMQQPEGFIIPGQEQ++CKLNRSIYGLKQASRSWNIRFD AIKS
Sbjct: 930  MDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKS 989

Query: 61   YGFDQIVDEPCVYKRIINNLVAFLVLYVVDILLIGNDVGLLTDIKQWLATQFQMKDLGVT 120
            YGFDQIVDEPCVYKRIIN  VAFLVLYV DILLIGND+GLLTDIKQWLATQFQMKDLG  
Sbjct: 990  YGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDIKQWLATQFQMKDLGEA 1049

Query: 121  QFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHEVTLSKEQCPKTPQ 180
            QFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRH VTLSKEQCPKTPQ
Sbjct: 1050 QFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQ 1109

Query: 181  DVEEMRHIPYASAVGSLMYVMLCIRPHICYAVGIFNRYQSNLGLAHWTAVKTILKYLRRT 240
            DVEEMRHIPYASAVGSLMY MLC RP ICYAVGI +RYQSN GLAHWTAVKTILKYLRRT
Sbjct: 1110 DVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTILKYLRRT 1169

Query: 241  RDYMLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTME 300
            RDY LVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTME
Sbjct: 1170 RDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTME 1229

Query: 301  AEYVAACEAAKEAVWLRKFLIDLKVVPNMSKPITLYYDNSGAVANSREPRSHKRGQHIER 360
            AEYVAACEAAKEAVWLR FLIDL+VVPNMSKPITLY DNSGAVANSREPRSHKRG+HIER
Sbjct: 1230 AEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIER 1289

Query: 361  KYHLIREIVHRRDVIVT 378
            KYHLIREIVHR DVIVT
Sbjct: 1290 KYHLIREIVHRGDVIVT 1306

BLAST of Cmc10g0275171 vs. ExPASy TrEMBL
Match: A0A5A7TWB9 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold133G00310 PE=4 SV=1)

HSP 1 Score: 702.6 bits (1812), Expect = 9.0e-199
Identity = 353/377 (93.63%), Postives = 360/377 (95.49%), Query Frame = 0

Query: 1    MDVKTAFLNDNLEKTIYMQQPEGFIIPGQEQQVCKLNRSIYGLKQASRSWNIRFDIAIKS 60
            MDVKTAFLN NLE+TIYMQQPEGFIIPGQEQ++CKLNRSIYGLKQASRSWNIRFD AIKS
Sbjct: 930  MDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKS 989

Query: 61   YGFDQIVDEPCVYKRIINNLVAFLVLYVVDILLIGNDVGLLTDIKQWLATQFQMKDLGVT 120
            YGFDQIVDEPCVYKRIIN  VAFLVLYV DILLIGND+GLLTDIKQWLATQFQMKDLG  
Sbjct: 990  YGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDIKQWLATQFQMKDLGEA 1049

Query: 121  QFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHEVTLSKEQCPKTPQ 180
            QFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRH VTLSKEQCPKTPQ
Sbjct: 1050 QFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQ 1109

Query: 181  DVEEMRHIPYASAVGSLMYVMLCIRPHICYAVGIFNRYQSNLGLAHWTAVKTILKYLRRT 240
            DVEEMRHIPYASAVGSLMY MLC RP ICYAVGI +RYQSN GLAHWTAVKTILKYLRRT
Sbjct: 1110 DVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTILKYLRRT 1169

Query: 241  RDYMLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTME 300
            RDYMLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVF LNGGAVVWRSIKQGCIADSTME
Sbjct: 1170 RDYMLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFILNGGAVVWRSIKQGCIADSTME 1229

Query: 301  AEYVAACEAAKEAVWLRKFLIDLKVVPNMSKPITLYYDNSGAVANSREPRSHKRGQHIER 360
            AEYVAACEAAKEAVWLR FLIDL+VVPNMSKPITLY DNSGAVANSREPRSHKRG+HIER
Sbjct: 1230 AEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIER 1289

Query: 361  KYHLIREIVHRRDVIVT 378
            KYHLIREIVHR DVIVT
Sbjct: 1290 KYHLIREIVHRGDVIVT 1306

BLAST of Cmc10g0275171 vs. ExPASy TrEMBL
Match: A0A5D3CSZ6 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold552G00320 PE=4 SV=1)

HSP 1 Score: 702.6 bits (1812), Expect = 9.0e-199
Identity = 353/377 (93.63%), Postives = 360/377 (95.49%), Query Frame = 0

Query: 1    MDVKTAFLNDNLEKTIYMQQPEGFIIPGQEQQVCKLNRSIYGLKQASRSWNIRFDIAIKS 60
            MDVKTAFLN NLE+TIYMQQPEGFIIPGQEQ++CKLNRSIYGLKQASRSWNIRFD AIKS
Sbjct: 930  MDVKTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKS 989

Query: 61   YGFDQIVDEPCVYKRIINNLVAFLVLYVVDILLIGNDVGLLTDIKQWLATQFQMKDLGVT 120
            YGFDQIVDEPCVYKRIIN  VAFLVLYV DILLIGND+GLLTDIKQWLATQFQMKDLG  
Sbjct: 990  YGFDQIVDEPCVYKRIINKSVAFLVLYVDDILLIGNDIGLLTDIKQWLATQFQMKDLGEA 1049

Query: 121  QFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHEVTLSKEQCPKTPQ 180
            QFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRH VTLSKEQCPKTPQ
Sbjct: 1050 QFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQ 1109

Query: 181  DVEEMRHIPYASAVGSLMYVMLCIRPHICYAVGIFNRYQSNLGLAHWTAVKTILKYLRRT 240
            DVEEMRHIPYASAVGSLMY MLC RP ICYAVGI +RYQSN GLAHWTAVKTILKYLRRT
Sbjct: 1110 DVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTILKYLRRT 1169

Query: 241  RDYMLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTME 300
            RDY LVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTME
Sbjct: 1170 RDYTLVYGSKDLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTME 1229

Query: 301  AEYVAACEAAKEAVWLRKFLIDLKVVPNMSKPITLYYDNSGAVANSREPRSHKRGQHIER 360
            AEYVAACEAAKEAVWLR FLIDL+VVPNMSKPITLY DNSGAVANSREPRSHKRG+HIER
Sbjct: 1230 AEYVAACEAAKEAVWLRNFLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIER 1289

Query: 361  KYHLIREIVHRRDVIVT 378
            KYHLIREIVHR DVIVT
Sbjct: 1290 KYHLIREIVHRGDVIVT 1306

BLAST of Cmc10g0275171 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 177.9 bits (450), Expect = 1.5e-44
Identity = 116/372 (31.18%), Postives = 198/372 (53.23%), Query Frame = 0

Query: 1   MDVKTAFLNDNLEKTIYMQQPEGFIIPGQE----QQVCKLNRSIYGLKQASRSWNIRFDI 60
           +D+  AFLN +L++ IYM+ P G+     +      VC L +SIYGLKQASR W ++F +
Sbjct: 193 LDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSV 252

Query: 61  AIKSYGFDQIVDEPCVYKRIINNLVAFLVLYVVDILLIGNDVGLLTDIKQWLATQFQMKD 120
            +  +GF Q   +   + +I   L   +++YV DI++  N+   + ++K  L + F+++D
Sbjct: 253 TLIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRD 312

Query: 121 LGVTQFVLGIQIFRDRKNKMLALSQASYIDKIVVKYSMQNSKRGLLPFRHEVTLSKEQCP 180
           LG  ++ LG++I R      + + Q  Y   ++ +  +   K   +P    VT S     
Sbjct: 313 LGPLKYFLGLEIARSAAG--INICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAH--- 372

Query: 181 KTPQDVEEMRHIPYASAVGSLMYVMLCIRPHICYAVGIFNRYQSNLGLAHWTAVKTILKY 240
            +  D  + +   Y   +G LMY+ +  R  I +AV   +++     LAH  AV  IL Y
Sbjct: 373 -SGGDFVDAK--AYRRLIGRLMYLQI-TRLDISFAVNKLSQFSEAPRLAHQQAVMKILHY 432

Query: 241 LRRTRDYMLVYGSK-DLILTGYTDSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIA 300
           ++ T    L Y S+ ++ L  ++D+ FQ+ +D+R+ST+G    L    + W+S KQ  ++
Sbjct: 433 IKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVS 492

Query: 301 DSTMEAEYVAACEAAKEAVWLRKFLIDLKVVPNMSKPITLYYDNSGAVANSREPRSHKRG 360
            S+ EAEY A   A  E +WL +F  +L++   +SKP  L+ DN+ A+  +     H+R 
Sbjct: 493 KSSAEAEYRALSFATDEMMWLAQFFRELQL--PLSKPTLLFCDNTAAIHIATNAVFHERT 552

Query: 361 QHIERKYHLIRE 368
           +HIE   H +RE
Sbjct: 553 KHIESDCHSVRE 553

BLAST of Cmc10g0275171 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 89.7 bits (221), Expect = 5.3e-18
Identity = 75/236 (31.78%), Postives = 117/236 (49.58%), Query Frame = 0

Query: 83  FLVLYVVDILLIGNDVGLLTDIKQWLATQFQMKDLGVTQFVLGIQIFRDRKNKMLALSQA 142
           +L+LYV DILL G+   LL  +   L++ F MKDLG   + LGIQI        L LSQ 
Sbjct: 2   YLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSG--LFLSQT 61

Query: 143 SYIDKIVVKYSMQNSK--RGLLPFRHEVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYV 202
            Y ++I+    M + K     LP +   ++S  + P  P D        + S VG+L Y+
Sbjct: 62  KYAEQILNNAGMLDCKPMSTPLPLKLNSSVSTAKYP-DPSD--------FRSIVGALQYL 121

Query: 203 MLCIRPHICYAVGIFNRYQSNLGLAHWTAVKTILKYLRRTRDY-MLVYGSKDLILTGYTD 262
            L  RP I YAV I  +      LA +  +K +L+Y++ T  + + ++ +  L +  + D
Sbjct: 122 TL-TRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCD 181

Query: 263 SDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVW 316
           SD+     +R+ST+G    L    + W + +Q  ++ S+ E EY A    A E  W
Sbjct: 182 SDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0037371.13.3e-20396.52gag/pol protein [Cucumis melo var. makuwa][more]
TYJ97618.11.9e-19893.63gag/pol protein [Cucumis melo var. makuwa][more]
KAA0048404.11.9e-19893.63gag/pol protein [Cucumis melo var. makuwa][more]
TYK14550.11.9e-19893.63gag/pol protein [Cucumis melo var. makuwa][more]
KAA0054490.11.9e-19893.63gag/pol protein [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
P109785.4e-9246.76Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... [more]
P041463.9e-5836.48Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3[more]
Q9ZT946.1e-4331.62Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... [more]
Q94HW23.3e-4132.16Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... [more]
P256001.4e-3132.48Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain AT... [more]
Match NameE-valueIdentityDescription
A0A5A7T7061.6e-20396.52Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold278G0076... [more]
A0A5A7SMH89.0e-19993.63Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G0025... [more]
A0A5D3CPJ69.0e-19993.63Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G0004... [more]
A0A5A7TWB99.0e-19993.63Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold133G0031... [more]
A0A5D3CSZ69.0e-19993.63Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold552G0032... [more]
Match NameE-valueIdentityDescription
AT4G23160.11.5e-4431.18cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [more]
ATMG00810.15.3e-1831.78DNA/RNA polymerases superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 1..163
e-value: 2.0E-40
score: 139.0
NoneNo IPR availablePANTHERPTHR45895FAMILY NOT NAMEDcoord: 1..245
NoneNo IPR availableCDDcd09272RNase_HI_RT_Ty1coord: 255..376
e-value: 7.33612E-54
score: 172.653
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 1..363

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc10g0275171.1Cmc10g0275171.1mRNA