Cmc10g0274471 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc10g0274471
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Gag/pol protein
Location	CMiso1.1chr10: 8194956 .. 8196113 (+)
RNA-Seq Expression	Cmc10g0274471
Synteny	Cmc10g0274471

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTAAAATCTATAAGGATTCTCTTGTCCATAGCCACATTTTATAATTATGAAATATGGCAAATGGATGTCAAGCTTGCTTTTCTGAATGACAATCTTGAAGAGAGTATCTTTATGTCTCAGTCCGAAGGGTTCATAACCAAAGGTCAAGAGCAAAAAGTTTACAAGCTGAATCGATCCATTTATGGGTTGAAACAAGCATCTAGATCTTGGAACATTAGGTTTGATACTGCGATCAAATCCTACGGTTTTGACCAAAACGTTGATAAACCTTGTGTATATAAGAAAATCAACAAAGGTAAAGTAGCTTTCTTAGTACTTTATGTGGATGATATCCTCCTCATTGGGAATGATGTGGGATACCTTACTGACGTGAAAACTTGGCTAGCAGCCCAATTCAAAATGAAAGATTTAGGAGAGGCACAATATGTTCTTAGGATCCAAATCATAAGGGATTGTAAGAACAAAATGCTAGCACTGTCTCAAGCAACCTATATCGACAAAATGTTAACATATTCGATGCAGAACTCTAAGAAGGGTTTATTACCTTTCAGGCATGGGGTTCACTTGTCTAAGGAACAGTGTCCTAAGACACCTCAAGAAGTTGAGGATATGAGATGTATTCCTTATGCCTCAGCTGTGGGCAGCTTAATGTATGTTATGCTCTGCACTAGGCCAGACATTTGTTATGCAGTGGGAATAGTCAGTTGGTATCAGTCCAACCCAGGGTTAGACCACTGGACGGTGGTTAAAATTATTCTCAAGTTTCTTAGGAGAACGAGAGGCTACATGGTTGTGTATGGAGCTAAGGATTTGATCCTTACAGGATACACTGATTCTGATTTCCAAACCGATAAAGATTCTAGGAAATCCACGTGGGGATCAGTGATCATCCTAAATGGAGGAGCTATAGTATGGCGTAGTATCAAGCAAGGATGCATTGCAGACTCTACAATGGAGGCTGAATACGTAGCCGCTTGTGAAGCAACAAAAGAAGCAGTTTGGCTTAGAAAGTTCCTACATGATTTGGAAGTTGTTCTAAACATGAACTTTTCCGTCATTCGATATTGTGATAATAGTGGGACAGTAGCCAATTCTAAAGAACCTCGCAGCCACAAACGAGGGAAACACATAGAGAGGAAGTATCACCTGATATAG

mRNA sequence

ATGTTAAAATCTATAAGGATTCTCTTGTCCATAGCCACATTTTATAATTATGAAATATGGCAAATGGATGTCAAGCTTGCTTTTCTGAATGACAATCTTGAAGAGAGTATCTTTATGTCTCAGTCCGAAGGGTTCATAACCAAAGGTCAAGAGCAAAAAGTTTACAAGCTGAATCGATCCATTTATGGGTTGAAACAAGCATCTAGATCTTGGAACATTAGGTTTGATACTGCGATCAAATCCTACGGTTTTGACCAAAACGTTGATAAACCTTGTGTATATAAGAAAATCAACAAAGGTAAAGTAGCTTTCTTAGTACTTTATGTGGATGATATCCTCCTCATTGGGAATGATGTGGGATACCTTACTGACGTGAAAACTTGGCTAGCAGCCCAATTCAAAATGAAAGATTTAGGAGAGGCACAATATGTTCTTAGGATCCAAATCATAAGGGATTGTAAGAACAAAATGCTAGCACTGTCTCAAGCAACCTATATCGACAAAATGTTAACATATTCGATGCAGAACTCTAAGAAGGGTTTATTACCTTTCAGGCATGGGGTTCACTTGTCTAAGGAACAGTGTCCTAAGACACCTCAAGAAGTTGAGGATATGAGATGTATTCCTTATGCCTCAGCTGTGGGCAGCTTAATGTATGTTATGCTCTGCACTAGGCCAGACATTTGTTATGCAGTGGGAATAGTCAGTTGGTATCAGTCCAACCCAGGGTTAGACCACTGGACGGTGGTTAAAATTATTCTCAAGTTTCTTAGGAGAACGAGAGGCTACATGGTTGTGTATGGAGCTAAGGATTTGATCCTTACAGGATACACTGATTCTGATTTCCAAACCGATAAAGATTCTAGGAAATCCACGTGGGGATCAGTGATCATCCTAAATGGAGGAGCTATAGTATGGCGTAGTATCAAGCAAGGATGCATTGCAGACTCTACAATGGAGGCTGAATACGTAGCCGCTTGTGAAGCAACAAAAGAAGCAGTTTGGCTTAGAAAGTTCCTACATGATTTGGAAGTTGTTCTAAACATGAACTTTTCCGTCATTCGATATTGTGATAATAGTGGGACAGTAGCCAATTCTAAAGAACCTCGCAGCCACAAACGAGGGAAACACATAGAGAGGAAGTATCACCTGATATAG

Coding sequence (CDS)

ATGTTAAAATCTATAAGGATTCTCTTGTCCATAGCCACATTTTATAATTATGAAATATGGCAAATGGATGTCAAGCTTGCTTTTCTGAATGACAATCTTGAAGAGAGTATCTTTATGTCTCAGTCCGAAGGGTTCATAACCAAAGGTCAAGAGCAAAAAGTTTACAAGCTGAATCGATCCATTTATGGGTTGAAACAAGCATCTAGATCTTGGAACATTAGGTTTGATACTGCGATCAAATCCTACGGTTTTGACCAAAACGTTGATAAACCTTGTGTATATAAGAAAATCAACAAAGGTAAAGTAGCTTTCTTAGTACTTTATGTGGATGATATCCTCCTCATTGGGAATGATGTGGGATACCTTACTGACGTGAAAACTTGGCTAGCAGCCCAATTCAAAATGAAAGATTTAGGAGAGGCACAATATGTTCTTAGGATCCAAATCATAAGGGATTGTAAGAACAAAATGCTAGCACTGTCTCAAGCAACCTATATCGACAAAATGTTAACATATTCGATGCAGAACTCTAAGAAGGGTTTATTACCTTTCAGGCATGGGGTTCACTTGTCTAAGGAACAGTGTCCTAAGACACCTCAAGAAGTTGAGGATATGAGATGTATTCCTTATGCCTCAGCTGTGGGCAGCTTAATGTATGTTATGCTCTGCACTAGGCCAGACATTTGTTATGCAGTGGGAATAGTCAGTTGGTATCAGTCCAACCCAGGGTTAGACCACTGGACGGTGGTTAAAATTATTCTCAAGTTTCTTAGGAGAACGAGAGGCTACATGGTTGTGTATGGAGCTAAGGATTTGATCCTTACAGGATACACTGATTCTGATTTCCAAACCGATAAAGATTCTAGGAAATCCACGTGGGGATCAGTGATCATCCTAAATGGAGGAGCTATAGTATGGCGTAGTATCAAGCAAGGATGCATTGCAGACTCTACAATGGAGGCTGAATACGTAGCCGCTTGTGAAGCAACAAAAGAAGCAGTTTGGCTTAGAAAGTTCCTACATGATTTGGAAGTTGTTCTAAACATGAACTTTTCCGTCATTCGATATTGTGATAATAGTGGGACAGTAGCCAATTCTAAAGAACCTCGCAGCCACAAACGAGGGAAACACATAGAGAGGAAGTATCACCTGATATAG

Protein sequence

MLKSIRILLSIATFYNYEIWQMDVKLAFLNDNLEESIFMSQSEGFITKGQEQKVYKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDKPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKTWLAAQFKMKDLGEAQYVLRIQIIRDCKNKMLALSQATYIDKMLTYSMQNSKKGLLPFRHGVHLSKEQCPKTPQEVEDMRCIPYASAVGSLMYVMLCTRPDICYAVGIVSWYQSNPGLDHWTVVKIILKFLRRTRGYMVVYGAKDLILTGYTDSDFQTDKDSRKSTWGSVIILNGGAIVWRSIKQGCIADSTMEAEYVAACEATKEAVWLRKFLHDLEVVLNMNFSVIRYCDNSGTVANSKEPRSHKRGKHIERKYHLI

Homology

[Close]

BLAST of Cmc10g0274471 vs. NCBI nr
Match: KAA0051544.1 (gag/pol protein [Cucumis melo var. makuwa] >TYK21279.1 gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 750.0 bits (1935), Expect = 1.0e-212
Identity = 370/383 (96.61%), Postives = 375/383 (97.91%), Query Frame = 0


Query: 3   KSIRILLSIATFYNYEIWQMDVKLAFLNDNLEESIFMSQSEGFITKGQEQKVYKLNRSIY 62
           KSIRILLSIATFY+YEIW+MDVKLAFLN NLEESIFMSQ EGFITKGQEQKVYKLNRSIY
Sbjct: 140 KSIRILLSIATFYDYEIWKMDVKLAFLNGNLEESIFMSQLEGFITKGQEQKVYKLNRSIY 199

Query: 63  GLKQASRSWNIRFDTAIKSYGFDQNVDKPCVYKKINKGKVAFLVLYVDDILLIGNDVGYL 122
            LKQASRSWNIRFDTAIKSYGFDQN DKPCVYKKINKGKVAFLVLYVDDILLIGNDVGYL
Sbjct: 200 RLKQASRSWNIRFDTAIKSYGFDQNFDKPCVYKKINKGKVAFLVLYVDDILLIGNDVGYL 259

Query: 123 TDVKTWLAAQFKMKDLGEAQYVLRIQIIRDCKNKMLALSQATYIDKMLTYSMQNSKKGLL 182
           TDVKTWLAAQFKMKDLGE+QYVLRIQIIRDCKNKM ALSQATYIDKMLTYSMQNSKKGLL
Sbjct: 260 TDVKTWLAAQFKMKDLGESQYVLRIQIIRDCKNKMQALSQATYIDKMLTYSMQNSKKGLL 319

Query: 183 PFRHGVHLSKEQCPKTPQEVEDMRCIPYASAVGSLMYVMLCTRPDICYAVGIVSWYQSNP 242
           PFRHGVHLSKEQC KTPQEVEDMRCIPYASAVGSLMY MLCTRPDICYAVGIVSWYQSNP
Sbjct: 320 PFRHGVHLSKEQCLKTPQEVEDMRCIPYASAVGSLMYAMLCTRPDICYAVGIVSWYQSNP 379

Query: 243 GLDHWTVVKIILKFLRRTRGYMVVYGAKDLILTGYTDSDFQTDKDSRKSTWGSVIILNGG 302
           GLDHWTVV+IILK+LRRTRGYMVVYGAKDLILTGYTDSDFQTDKDSRKSTWGSVIILNGG
Sbjct: 380 GLDHWTVVQIILKYLRRTRGYMVVYGAKDLILTGYTDSDFQTDKDSRKSTWGSVIILNGG 439

Query: 303 AIVWRSIKQGCIADSTMEAEYVAACEATKEAVWLRKFLHDLEVVLNMNFSVIRYCDNSGT 362
           AIVWRSIKQGCIADSTMEAEYVAA EATKEAVWLRKFLHDLEVVLNMNFSVIRYCDNSGT
Sbjct: 440 AIVWRSIKQGCIADSTMEAEYVAAFEATKEAVWLRKFLHDLEVVLNMNFSVIRYCDNSGT 499

Query: 363 VANSKEPRSHKRGKHIERKYHLI 386
           VANSKEPRSHKRGKHIERKYHLI
Sbjct: 500 VANSKEPRSHKRGKHIERKYHLI 522

[Close]

BLAST of Cmc10g0274471 vs. NCBI nr
Match: KAA0025945.1 (gag/pol protein [Cucumis melo var. makuwa] >KAA0026303.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0035786.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0040492.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0041262.1 gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 699.1 bits (1803), Expect = 2.1e-197
Identity = 350/386 (90.67%), Postives = 360/386 (93.26%), Query Frame = 0


Query: 1    MLKSIRILLSIATFYNYEIWQMDVKLAFLNDNLEESIFMSQSEGFITKGQEQKVYKLNRS 60
            MLKSIRILLSIATFY+YEIWQMDVK AFLN NLEESIFMSQ EGFIT+GQEQKV KLNRS
Sbjct: 802  MLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRS 861

Query: 61   IYGLKQASRSWNIRFDTAIKSYGFDQNVDKPCVYKKINKGKVAFLVLYVDDILLIGNDVG 120
            IYGLKQASRSWNIRFDTAIKSYGFDQNVD+PCVYKKINKGKVAFLVLYVDDILLIGNDVG
Sbjct: 862  IYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVG 921

Query: 121  YLTDVKTWLAAQFKMKDLGEAQYVLRIQIIRDCKNKMLALSQATYIDKMLT-YSMQNSKK 180
            YLTDVK WLAAQF+MKDLGEAQYVL IQIIRD KNK LALSQATYIDK+L  YSMQNSKK
Sbjct: 922  YLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKK 981

Query: 181  GLLPFRHGVHLSKEQCPKTPQEVEDMRCIPYASAVGSLMYVMLCTRPDICYAVGIVSWYQ 240
            GLLPFRHGVHLSKEQ PKTPQEVEDMR IPYASAVGSLMY MLCTRPDICYAVGIVS YQ
Sbjct: 982  GLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQ 1041

Query: 241  SNPGLDHWTVVKIILKFLRRTRGYMVVYGAKDLILTGYTDSDFQTDKDSRKSTWGSVIIL 300
            SNPGLDHWT VKI+LK+LRRTR YM+VYGAKDLILTGYTDSDFQTDKDSRKST GSV  L
Sbjct: 1042 SNPGLDHWTAVKIVLKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTL 1101

Query: 301  NGGAIVWRSIKQGCIADSTMEAEYVAACEATKEAVWLRKFLHDLEVVLNMNFSVIRYCDN 360
            NGGA+VWRSIKQGCIADSTMEAEYVAACEA KEAVWLRKFLHDLEVV NMN  +  YCDN
Sbjct: 1102 NGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDN 1161

Query: 361  SGTVANSKEPRSHKRGKHIERKYHLI 386
            SG VANSKEPRSHKRGKHIERKYHLI
Sbjct: 1162 SGAVANSKEPRSHKRGKHIERKYHLI 1187

[Close]

BLAST of Cmc10g0274471 vs. NCBI nr
Match: KAA0059226.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 699.1 bits (1803), Expect = 2.1e-197
Identity = 350/386 (90.67%), Postives = 360/386 (93.26%), Query Frame = 0


Query: 1    MLKSIRILLSIATFYNYEIWQMDVKLAFLNDNLEESIFMSQSEGFITKGQEQKVYKLNRS 60
            MLKSIRILLSIATFY+YEIWQMDVK AFLN NLEESIFMSQ EGFIT+GQEQKV KLNRS
Sbjct: 676  MLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRS 735

Query: 61   IYGLKQASRSWNIRFDTAIKSYGFDQNVDKPCVYKKINKGKVAFLVLYVDDILLIGNDVG 120
            IYGLKQASRSWNIRFDTAIKSYGFDQNVD+PCVYKKINKGKVAFLVLYVDDILLIGNDVG
Sbjct: 736  IYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVG 795

Query: 121  YLTDVKTWLAAQFKMKDLGEAQYVLRIQIIRDCKNKMLALSQATYIDKMLT-YSMQNSKK 180
            YLTDVK WLAAQF+MKDLGEAQYVL IQIIRD KNK LALSQATYIDK+L  YSMQNSKK
Sbjct: 796  YLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKK 855

Query: 181  GLLPFRHGVHLSKEQCPKTPQEVEDMRCIPYASAVGSLMYVMLCTRPDICYAVGIVSWYQ 240
            GLLPFRHGVHLSKEQ PKTPQEVEDMR IPYASAVGSLMY MLCTRPDICYAVGIVS YQ
Sbjct: 856  GLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQ 915

Query: 241  SNPGLDHWTVVKIILKFLRRTRGYMVVYGAKDLILTGYTDSDFQTDKDSRKSTWGSVIIL 300
            SNPGLDHWT VKI+LK+LRRTR YM+VYGAKDLILTGYTDSDFQTDKDSRKST GSV  L
Sbjct: 916  SNPGLDHWTAVKIVLKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTL 975

Query: 301  NGGAIVWRSIKQGCIADSTMEAEYVAACEATKEAVWLRKFLHDLEVVLNMNFSVIRYCDN 360
            NGGA+VWRSIKQGCIADSTMEAEYVAACEA KEAVWLRKFLHDLEVV NMN  +  YCDN
Sbjct: 976  NGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDN 1035

Query: 361  SGTVANSKEPRSHKRGKHIERKYHLI 386
            SG VANSKEPRSHKRGKHIERKYHLI
Sbjct: 1036 SGAVANSKEPRSHKRGKHIERKYHLI 1061

[Close]

BLAST of Cmc10g0274471 vs. NCBI nr
Match: KAA0035907.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 689.5 bits (1778), Expect = 1.7e-194
Identity = 346/386 (89.64%), Postives = 357/386 (92.49%), Query Frame = 0


Query: 1    MLKSIRILLSIATFYNYEIWQMDVKLAFLNDNLEESIFMSQSEGFITKGQEQKVYKLNRS 60
            MLKSIRILLSIA FY+YEIWQMDVK AFLN NLEESIFMSQ EGFIT+GQEQKV KLNRS
Sbjct: 802  MLKSIRILLSIAKFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRS 861

Query: 61   IYGLKQASRSWNIRFDTAIKSYGFDQNVDKPCVYKKINKGKVAFLVLYVDDILLIGNDVG 120
            IYGLKQASRSWNIRFDTAIKSYGFDQNVD+PCVYKKINKGKVAFLVLYVDDILLIGNDVG
Sbjct: 862  IYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVG 921

Query: 121  YLTDVKTWLAAQFKMKDLGEAQYVLRIQIIRDCKNKMLALSQATYIDKMLT-YSMQNSKK 180
            YLTDVK WLAAQF+MKDLGE QYVL IQIIRD KNK LALSQATYIDK+L  YSMQNSKK
Sbjct: 922  YLTDVKAWLAAQFQMKDLGEGQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKK 981

Query: 181  GLLPFRHGVHLSKEQCPKTPQEVEDMRCIPYASAVGSLMYVMLCTRPDICYAVGIVSWYQ 240
            GLLPFRHGVHLSKEQ PKTPQEVEDMR IPYASAVGSLMY MLCTRPDICYAVGIVS YQ
Sbjct: 982  GLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQ 1041

Query: 241  SNPGLDHWTVVKIILKFLRRTRGYMVVYGAKDLILTGYTDSDFQTDKDSRKSTWGSVIIL 300
            SNPGLDHWT VKIILK+LRRTR YM+VYGAKDLILTGYT+SDFQTDKDSRKST  SV  L
Sbjct: 1042 SNPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYTNSDFQTDKDSRKSTSRSVFTL 1101

Query: 301  NGGAIVWRSIKQGCIADSTMEAEYVAACEATKEAVWLRKFLHDLEVVLNMNFSVIRYCDN 360
            NGGA+VWRSIKQGCIADSTMEAEYVAACEA KEAVWL+KFLHDLEVV NMN  +  YCDN
Sbjct: 1102 NGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLKKFLHDLEVVPNMNLPITLYCDN 1161

Query: 361  SGTVANSKEPRSHKRGKHIERKYHLI 386
            SG VANSKEPRSHKRGKHIERKYHLI
Sbjct: 1162 SGAVANSKEPRSHKRGKHIERKYHLI 1187

[Close]

BLAST of Cmc10g0274471 vs. NCBI nr
Match: KAA0040367.1 (gag/pol protein [Cucumis melo var. makuwa] >TYK23337.1 gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 676.8 bits (1745), Expect = 1.1e-190
Identity = 339/386 (87.82%), Postives = 352/386 (91.19%), Query Frame = 0


Query: 1   MLKSIRILLSIATFYNYEIWQMDVKLAFLNDNLEESIFMSQSEGFITKGQEQKVYKLNRS 60
           MLKSIRILLSIATFY+YEIWQMDVK AFLNDNLEESIFMSQ EGFIT+GQEQKV KLNRS
Sbjct: 1   MLKSIRILLSIATFYDYEIWQMDVKTAFLNDNLEESIFMSQPEGFITQGQEQKVCKLNRS 60

Query: 61  IYGLKQASRSWNIRFDTAIKSYGFDQNVDKPCVYKKINKGKVAFLVLYVDDILLIGNDVG 120
           IYGLKQ+SRSWN+RFDTAIKSYGFDQNVD+PCVYKKINKGKVAFLVLYVDDILLIGNDVG
Sbjct: 61  IYGLKQSSRSWNMRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVG 120

Query: 121 YLTDVKTWLAAQFKMKDLGEAQYVLRIQIIRDCKNKMLALSQATYIDKMLT-YSMQNSKK 180
           YLTDVK WLA QF+MKDLGE QYVL IQIIRD KNK LALSQATYIDKML  YSMQNSKK
Sbjct: 121 YLTDVKAWLATQFQMKDLGETQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQNSKK 180

Query: 181 GLLPFRHGVHLSKEQCPKTPQEVEDMRCIPYASAVGSLMYVMLCTRPDICYAVGIVSWYQ 240
            LLPFRHGVHLSKEQCPKTPQE+EDMR I YASAVGSLMY ML TRPDICYAVGIVS Y 
Sbjct: 181 DLLPFRHGVHLSKEQCPKTPQEIEDMRRILYASAVGSLMYDMLYTRPDICYAVGIVSRYL 240

Query: 241 SNPGLDHWTVVKIILKFLRRTRGYMVVYGAKDLILTGYTDSDFQTDKDSRKSTWGSVIIL 300
            NPGLDHWT VKIILK+LRRTR YM+VYG KDLILTGYTDSDFQTDKDSRKST GSV  L
Sbjct: 241 FNPGLDHWTAVKIILKYLRRTRDYMLVYGGKDLILTGYTDSDFQTDKDSRKSTSGSVFTL 300

Query: 301 NGGAIVWRSIKQGCIADSTMEAEYVAACEATKEAVWLRKFLHDLEVVLNMNFSVIRYCDN 360
           N GA+VW SIKQGCIADSTMEAEY+AACEA KE VWLRKFLHDLEVV NMN S+  YCDN
Sbjct: 301 NRGAVVWHSIKQGCIADSTMEAEYIAACEAAKEVVWLRKFLHDLEVVPNMNLSITLYCDN 360

Query: 361 SGTVANSKEPRSHKRGKHIERKYHLI 386
           SG VANSKEPR+HKRGKHIERKYHLI
Sbjct: 361 SGAVANSKEPRNHKRGKHIERKYHLI 386

[Close]

BLAST of Cmc10g0274471 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 339.7 bits (870), Expect = 4.2e-92
Identity = 178/386 (46.11%), Postives = 254/386 (65.80%), Query Frame = 0


Query: 2    LKSIRILLSIATFYNYEIWQMDVKLAFLNDNLEESIFMSQSEGFITKGQEQKVYKLNRSI 61
            + SIR +LS+A   + E+ Q+DVK AFL+ +LEE I+M Q EGF   G++  V KLN+S+
Sbjct: 901  MTSIRTILSLAASLDLEVEQLDVKTAFLHGDLEEEIYMEQPEGFEVAGKKHMVCKLNKSL 960

Query: 62   YGLKQASRSWNIRFDTAIKSYGFDQNVDKPCVY-KKINKGKVAFLVLYVDDILLIGNDVG 121
            YGLKQA R W ++FD+ +KS  + +    PCVY K+ ++     L+LYVDD+L++G D G
Sbjct: 961  YGLKQAPRQWYMKFDSFMKSQTYLKTYSDPCVYFKRFSENNFIILLLYVDDMLIVGKDKG 1020

Query: 122  YLTDVKTWLAAQFKMKDLGEAQYVLRIQIIRDCKNKMLALSQATYIDKML-TYSMQNSKK 181
             +  +K  L+  F MKDLG AQ +L ++I+R+  ++ L LSQ  YI+++L  ++M+N+K 
Sbjct: 1021 LIAKLKGDLSKSFDMKDLGPAQQILGMKIVRERTSRKLWLSQEKYIERVLERFNMKNAKP 1080

Query: 182  GLLPFRHGVHLSKEQCPKTPQEVEDMRCIPYASAVGSLMYVMLCTRPDICYAVGIVSWYQ 241
               P    + LSK+ CP T +E  +M  +PY+SAVGSLMY M+CTRPDI +AVG+VS + 
Sbjct: 1081 VSTPLAGHLKLSKKMCPTTVEEKGNMAKVPYSSAVGSLMYAMVCTRPDIAHAVGVVSRFL 1140

Query: 242  SNPGLDHWTVVKIILKFLRRTRGYMVVYGAKDLILTGYTDSDFQTDKDSRKSTWGSVIIL 301
             NPG +HW  VK IL++LR T G  + +G  D IL GYTD+D   D D+RKS+ G +   
Sbjct: 1141 ENPGKEHWEAVKWILRYLRGTTGDCLCFGGSDPILKGYTDADMAGDIDNRKSSTGYLFTF 1200

Query: 302  NGGAIVWRSIKQGCIADSTMEAEYVAACEATKEAVWLRKFLHDLEVVLNMNFSVIRYCDN 361
            +GGAI W+S  Q C+A ST EAEY+AA E  KE +WL++FL +L   L+    V+ YCD+
Sbjct: 1201 SGGAISWQSKLQKCVALSTTEAEYIAATETGKEMIWLKRFLQELG--LHQKEYVV-YCDS 1260

Query: 362  SGTVANSKEPRSHKRGKHIERKYHLI 386
               +  SK    H R KHI+ +YH I
Sbjct: 1261 QSAIDLSKNSMYHARTKHIDVRYHWI 1283

[Close]

BLAST of Cmc10g0274471 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 216.1 bits (549), Expect = 7.0e-55
Identity = 135/393 (34.35%), Postives = 214/393 (54.45%), Query Frame = 0


Query: 2    LKSIRILLSIATFYNYEIWQMDVKLAFLNDNLEESIFMSQSEGFITKGQEQKVYKLNRSI 61
            + S R +LS+   YN ++ QMDVK AFLN  L+E I+M   +G         V KLN++I
Sbjct: 981  ISSFRFILSLVIQYNLKVHQMDVKTAFLNGTLKEEIYMRLPQGI--SCNSDNVCKLNKAI 1040

Query: 62   YGLKQASRSWNIRFDTAIKSYGFDQNVDKPCVY--KKINKGKVAFLVLYVDDILLIGNDV 121
            YGLKQA+R W   F+ A+K   F  +    C+Y   K N  +  +++LYVDD+++   D+
Sbjct: 1041 YGLKQAARCWFEVFEQALKECEFVNSSVDRCIYILDKGNINENIYVLLYVDDVVIATGDM 1100

Query: 122  GYLTDVKTWLAAQFKMKDLGEAQYVLRIQIIRDCKNKMLALSQATYIDKMLT-YSMQNSK 181
              + + K +L  +F+M DL E ++ + I+I  + +   + LSQ+ Y+ K+L+ ++M+N  
Sbjct: 1101 TRMNNFKRYLMEKFRMTDLNEIKHFIGIRI--EMQEDKIYLSQSAYVKKILSKFNMENCN 1160

Query: 182  KGLLPFRHGVHL----SKEQCPKTPQEVEDMRCIPYASAVGSLMYVMLCTRPDICYAVGI 241
                P    ++     S E C             P  S +G LMY+MLCTRPD+  AV I
Sbjct: 1161 AVSTPLPSKINYELLNSDEDCN-----------TPCRSLIGCLMYIMLCTRPDLTTAVNI 1220

Query: 242  VSWYQSNPGLDHWTVVKIILKFLRRTRGYMVVYG---AKDLILTGYTDSDFQTDKDSRKS 301
            +S Y S    + W  +K +L++L+ T    +++    A +  + GY DSD+   +  RKS
Sbjct: 1221 LSRYSSKNNSELWQNLKRVLRYLKGTIDMKLIFKKNLAFENKIIGYVDSDWAGSEIDRKS 1280

Query: 302  TWGSVI-ILNGGAIVWRSIKQGCIADSTMEAEYVAACEATKEAVWLRKFLHDLEVVLNMN 361
            T G +  + +   I W + +Q  +A S+ EAEY+A  EA +EA+WL+  L  + + L   
Sbjct: 1281 TTGYLFKMFDFNLICWNTKRQNSVAASSTEAEYMALFEAVREALWLKFLLTSINIKLENP 1340

Query: 362  FSVIRYCDNSGTVANSKEPRSHKRGKHIERKYH 384
              +  Y DN G ++ +  P  HKR KHI+ KYH
Sbjct: 1341 IKI--YEDNQGCISIANNPSCHKRAKHIDIKYH 1356

[Close]

BLAST of Cmc10g0274471 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 3.7e-48
Identity = 126/384 (32.81%), Postives = 190/384 (49.48%), Query Frame = 0


Query: 4    SIRILLSIATFYNYEIWQMDVKLAFLNDNLEESIFMSQSEGFITKGQEQKVYKLNRSIYG 63
            SIRI+L +A   ++ I Q+DV  AFL   L + ++MSQ  GF+ K +   V +L ++IYG
Sbjct: 1029 SIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDEVYMSQPPGFVDKDRPDYVCRLRKAIYG 1088

Query: 64   LKQASRSWNIRFDTAIKSYGFDQNVDKPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLT 123
            LKQA R+W +   T + + GF  ++    ++       + ++++YVDDIL+ GND   L 
Sbjct: 1089 LKQAPRAWYVELRTYLLTVGFVNSISDTSLFVLQRGRSIIYMLVYVDDILITGNDTVLLK 1148

Query: 124  DVKTWLAAQFKMKDLGEAQYVLRIQIIRDCKNKMLALSQATY-IDKMLTYSMQNSKKGLL 183
                 L+ +F +K+  +  Y L I+  R  +   L LSQ  Y +D +   +M  +K    
Sbjct: 1149 HTLDALSQRFSVKEHEDLHYFLGIEAKRVPQG--LHLSQRRYTLDLLARTNMLTAKPVAT 1208

Query: 184  PFRHGVHLSKEQCPKTPQEVEDMRCIPYASAVGSLMYVMLCTRPDICYAVGIVSWYQSNP 243
            P      L+     K P   E      Y   VGSL Y+   TRPD+ YAV  +S Y   P
Sbjct: 1209 PMATSPKLTLHSGTKLPDPTE------YRGIVGSLQYLAF-TRPDLSYAVNRLSQYMHMP 1268

Query: 244  GLDHWTVVKIILKFLRRTRGY-MVVYGAKDLILTGYTDSDFQTDKDSRKSTWGSVIILNG 303
              DHW  +K +L++L  T  + + +     L L  Y+D+D+  D D   ST G ++ L  
Sbjct: 1269 TDDHWNALKRVLRYLAGTPDHGIFLKKGNTLSLHAYSDADWAGDTDDYVSTNGYIVYLGH 1328

Query: 304  GAIVWRSIKQGCIADSTMEAEYVAACEATKEAVWLRKFLHDLEVVLNMNFSVIRYCDNSG 363
              I W S KQ  +  S+ EAEY +    + E  W+   L +L +   ++   + YCDN G
Sbjct: 1329 HPISWSSKKQKGVVRSSTEAEYRSVANTSSELQWICSLLTELGI--QLSHPPVIYCDNVG 1388

Query: 364  TVANSKEPRSHKRGKHIERKYHLI 386
                   P  H R KHI   YH I
Sbjct: 1389 ATYLCANPVFHSRMKHIALDYHFI 1401

[Close]

BLAST of Cmc10g0274471 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 4.6e-46
Identity = 131/384 (34.11%), Postives = 187/384 (48.70%), Query Frame = 0


Query: 4    SIRILLSIATFYNYEIWQMDVKLAFLNDNLEESIFMSQSEGFITKGQEQKVYKLNRSIYG 63
            SIRI+L +A   ++ I Q+DV  AFL   L + ++MSQ  GFI K +   V KL +++YG
Sbjct: 1046 SIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDDVYMSQPPGFIDKDRPNYVCKLRKALYG 1105

Query: 64   LKQASRSWNIRFDTAIKSYGFDQNVDKPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLT 123
            LKQA R+W +     + + GF  +V    ++       + ++++YVDDIL+ GND   L 
Sbjct: 1106 LKQAPRAWYVELRNYLLTIGFVNSVSDTSLFVLQRGKSIVYMLVYVDDILITGNDPTLLH 1165

Query: 124  DVKTWLAAQFKMKDLGEAQYVLRIQIIRDCKNKMLALSQATYI-DKMLTYSMQNSKKGLL 183
            +    L+ +F +KD  E  Y L I+  R      L LSQ  YI D +   +M  +K    
Sbjct: 1166 NTLDNLSQRFSVKDHEELHYFLGIEAKRVPTG--LHLSQRRYILDLLARTNMITAKPVTT 1225

Query: 184  PFRHGVHLSKEQCPKTPQEVEDMRCIPYASAVGSLMYVMLCTRPDICYAVGIVSWYQSNP 243
            P      LS     K     E      Y   VGSL Y+   TRPDI YAV  +S +   P
Sbjct: 1226 PMAPSPKLSLYSGTKLTDPTE------YRGIVGSLQYLAF-TRPDISYAVNRLSQFMHMP 1285

Query: 244  GLDHWTVVKIILKFLRRTRGY-MVVYGAKDLILTGYTDSDFQTDKDSRKSTWGSVIILNG 303
              +H   +K IL++L  T  + + +     L L  Y+D+D+  DKD   ST G ++ L  
Sbjct: 1286 TEEHLQALKRILRYLAGTPNHGIFLKKGNTLSLHAYSDADWAGDKDDYVSTNGYIVYLGH 1345

Query: 304  GAIVWRSIKQGCIADSTMEAEYVAACEATKEAVWLRKFLHDLEVVLNMNFSVIRYCDNSG 363
              I W S KQ  +  S+ EAEY +    + E  W+   L +L + L      + YCDN G
Sbjct: 1346 HPISWSSKKQKGVVRSSTEAEYRSVANTSSEMQWICSLLTELGIRLTR--PPVIYCDNVG 1405

Query: 364  TVANSKEPRSHKRGKHIERKYHLI 386
                   P  H R KHI   YH I
Sbjct: 1406 ATYLCANPVFHSRMKHIAIDYHFI 1418

[Close]

BLAST of Cmc10g0274471 vs. ExPASy Swiss-Prot
Match: P25600 (Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY5A PE=5 SV=2)

HSP 1 Score: 136.7 bits (343), Expect = 5.4e-31
Identity = 99/314 (31.53%), Postives = 146/314 (46.50%), Query Frame = 0


Query: 22  MDVKLAFLNDNLEESIFMSQSEGFITKGQEQKVYKLNRSIYGLKQASRSWNIRFDTAIKS 81
           MDV  AFLN  ++E I++ Q  GF+ +     V++L   +YGLKQA   WN   +  +K 
Sbjct: 1   MDVDTAFLNSTMDEPIYVKQPPGFVNERNPDYVWELYGGMYGLKQAPLLWNEHINNTLKK 60

Query: 82  YGFDQNVDKPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKTWLAAQFKMKDLGEA 141
            GF ++  +  +Y +       ++ +YVDD+L+          VK  L   + MKDLG+ 
Sbjct: 61  IGFCRHEGEHGLYFRSTSDGPIYIAVYVDDLLVAAPSPKIYDRVKQELTKLYSMKDLGKV 120

Query: 142 QYVLRIQIIRDCKNKMLALSQATYIDKMLTYSMQNS-KKGLLPFRHGVHLSKEQCPKTPQ 201
              L +  I    N  + LS   YI K  + S  N+ K    P  +    SK     T  
Sbjct: 121 DKFLGLN-IHQSSNGDITLSLQDYIAKAASESEINTFKLTQTPLCN----SKPLFETTSP 180

Query: 202 EVEDMRCIPYASAVGSLMYVMLCTRPDICYAVGIVSWYQSNPGLDHWTVVKIILKFLRRT 261
            ++D+   PY S VG L++     RPDI Y V ++S +   P   H    + +L++L  T
Sbjct: 181 HLKDI--TPYQSIVGQLLFCANTGRPDISYPVSLLSRFLREPRAIHLESARRVLRYLYTT 240

Query: 262 RGYMVVY-GAKDLILTGYTDSDFQTDKDSRKSTWGSVIILNGGAIVWRSIK-QGCIADST 321
           R   + Y     L LT Y D+      D   ST G V +L G  + W S K +G I   +
Sbjct: 241 RSMCLKYRSGSQLALTVYCDASHGAIHDLPHSTGGYVTLLAGAPVTWSSKKLKGVIPVPS 300

Query: 322 MEAEYVAACEATKE 333
            EAEY+ A E   E
Sbjct: 301 TEAEYITASETVME 307

[Close]

BLAST of Cmc10g0274471 vs. ExPASy TrEMBL
Match: A0A5A7U8A7 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold101G00340 PE=4 SV=1)

HSP 1 Score: 750.0 bits (1935), Expect = 5.0e-213
Identity = 370/383 (96.61%), Postives = 375/383 (97.91%), Query Frame = 0


Query: 3   KSIRILLSIATFYNYEIWQMDVKLAFLNDNLEESIFMSQSEGFITKGQEQKVYKLNRSIY 62
           KSIRILLSIATFY+YEIW+MDVKLAFLN NLEESIFMSQ EGFITKGQEQKVYKLNRSIY
Sbjct: 140 KSIRILLSIATFYDYEIWKMDVKLAFLNGNLEESIFMSQLEGFITKGQEQKVYKLNRSIY 199

Query: 63  GLKQASRSWNIRFDTAIKSYGFDQNVDKPCVYKKINKGKVAFLVLYVDDILLIGNDVGYL 122
            LKQASRSWNIRFDTAIKSYGFDQN DKPCVYKKINKGKVAFLVLYVDDILLIGNDVGYL
Sbjct: 200 RLKQASRSWNIRFDTAIKSYGFDQNFDKPCVYKKINKGKVAFLVLYVDDILLIGNDVGYL 259

Query: 123 TDVKTWLAAQFKMKDLGEAQYVLRIQIIRDCKNKMLALSQATYIDKMLTYSMQNSKKGLL 182
           TDVKTWLAAQFKMKDLGE+QYVLRIQIIRDCKNKM ALSQATYIDKMLTYSMQNSKKGLL
Sbjct: 260 TDVKTWLAAQFKMKDLGESQYVLRIQIIRDCKNKMQALSQATYIDKMLTYSMQNSKKGLL 319

Query: 183 PFRHGVHLSKEQCPKTPQEVEDMRCIPYASAVGSLMYVMLCTRPDICYAVGIVSWYQSNP 242
           PFRHGVHLSKEQC KTPQEVEDMRCIPYASAVGSLMY MLCTRPDICYAVGIVSWYQSNP
Sbjct: 320 PFRHGVHLSKEQCLKTPQEVEDMRCIPYASAVGSLMYAMLCTRPDICYAVGIVSWYQSNP 379

Query: 243 GLDHWTVVKIILKFLRRTRGYMVVYGAKDLILTGYTDSDFQTDKDSRKSTWGSVIILNGG 302
           GLDHWTVV+IILK+LRRTRGYMVVYGAKDLILTGYTDSDFQTDKDSRKSTWGSVIILNGG
Sbjct: 380 GLDHWTVVQIILKYLRRTRGYMVVYGAKDLILTGYTDSDFQTDKDSRKSTWGSVIILNGG 439

Query: 303 AIVWRSIKQGCIADSTMEAEYVAACEATKEAVWLRKFLHDLEVVLNMNFSVIRYCDNSGT 362
           AIVWRSIKQGCIADSTMEAEYVAA EATKEAVWLRKFLHDLEVVLNMNFSVIRYCDNSGT
Sbjct: 440 AIVWRSIKQGCIADSTMEAEYVAAFEATKEAVWLRKFLHDLEVVLNMNFSVIRYCDNSGT 499

Query: 363 VANSKEPRSHKRGKHIERKYHLI 386
           VANSKEPRSHKRGKHIERKYHLI
Sbjct: 500 VANSKEPRSHKRGKHIERKYHLI 522

[Close]

BLAST of Cmc10g0274471 vs. ExPASy TrEMBL
Match: A0A5A7TZD0 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G00090 PE=4 SV=1)

HSP 1 Score: 699.1 bits (1803), Expect = 1.0e-197
Identity = 350/386 (90.67%), Postives = 360/386 (93.26%), Query Frame = 0


Query: 1    MLKSIRILLSIATFYNYEIWQMDVKLAFLNDNLEESIFMSQSEGFITKGQEQKVYKLNRS 60
            MLKSIRILLSIATFY+YEIWQMDVK AFLN NLEESIFMSQ EGFIT+GQEQKV KLNRS
Sbjct: 802  MLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRS 861

Query: 61   IYGLKQASRSWNIRFDTAIKSYGFDQNVDKPCVYKKINKGKVAFLVLYVDDILLIGNDVG 120
            IYGLKQASRSWNIRFDTAIKSYGFDQNVD+PCVYKKINKGKVAFLVLYVDDILLIGNDVG
Sbjct: 862  IYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVG 921

Query: 121  YLTDVKTWLAAQFKMKDLGEAQYVLRIQIIRDCKNKMLALSQATYIDKMLT-YSMQNSKK 180
            YLTDVK WLAAQF+MKDLGEAQYVL IQIIRD KNK LALSQATYIDK+L  YSMQNSKK
Sbjct: 922  YLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKK 981

Query: 181  GLLPFRHGVHLSKEQCPKTPQEVEDMRCIPYASAVGSLMYVMLCTRPDICYAVGIVSWYQ 240
            GLLPFRHGVHLSKEQ PKTPQEVEDMR IPYASAVGSLMY MLCTRPDICYAVGIVS YQ
Sbjct: 982  GLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQ 1041

Query: 241  SNPGLDHWTVVKIILKFLRRTRGYMVVYGAKDLILTGYTDSDFQTDKDSRKSTWGSVIIL 300
            SNPGLDHWT VKI+LK+LRRTR YM+VYGAKDLILTGYTDSDFQTDKDSRKST GSV  L
Sbjct: 1042 SNPGLDHWTAVKIVLKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTL 1101

Query: 301  NGGAIVWRSIKQGCIADSTMEAEYVAACEATKEAVWLRKFLHDLEVVLNMNFSVIRYCDN 360
            NGGA+VWRSIKQGCIADSTMEAEYVAACEA KEAVWLRKFLHDLEVV NMN  +  YCDN
Sbjct: 1102 NGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDN 1161

Query: 361  SGTVANSKEPRSHKRGKHIERKYHLI 386
            SG VANSKEPRSHKRGKHIERKYHLI
Sbjct: 1162 SGAVANSKEPRSHKRGKHIERKYHLI 1187

[Close]

BLAST of Cmc10g0274471 vs. ExPASy TrEMBL
Match: A0A5A7UYE8 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G001570 PE=4 SV=1)

HSP 1 Score: 699.1 bits (1803), Expect = 1.0e-197
Identity = 350/386 (90.67%), Postives = 360/386 (93.26%), Query Frame = 0


Query: 1    MLKSIRILLSIATFYNYEIWQMDVKLAFLNDNLEESIFMSQSEGFITKGQEQKVYKLNRS 60
            MLKSIRILLSIATFY+YEIWQMDVK AFLN NLEESIFMSQ EGFIT+GQEQKV KLNRS
Sbjct: 676  MLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRS 735

Query: 61   IYGLKQASRSWNIRFDTAIKSYGFDQNVDKPCVYKKINKGKVAFLVLYVDDILLIGNDVG 120
            IYGLKQASRSWNIRFDTAIKSYGFDQNVD+PCVYKKINKGKVAFLVLYVDDILLIGNDVG
Sbjct: 736  IYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVG 795

Query: 121  YLTDVKTWLAAQFKMKDLGEAQYVLRIQIIRDCKNKMLALSQATYIDKMLT-YSMQNSKK 180
            YLTDVK WLAAQF+MKDLGEAQYVL IQIIRD KNK LALSQATYIDK+L  YSMQNSKK
Sbjct: 796  YLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKK 855

Query: 181  GLLPFRHGVHLSKEQCPKTPQEVEDMRCIPYASAVGSLMYVMLCTRPDICYAVGIVSWYQ 240
            GLLPFRHGVHLSKEQ PKTPQEVEDMR IPYASAVGSLMY MLCTRPDICYAVGIVS YQ
Sbjct: 856  GLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQ 915

Query: 241  SNPGLDHWTVVKIILKFLRRTRGYMVVYGAKDLILTGYTDSDFQTDKDSRKSTWGSVIIL 300
            SNPGLDHWT VKI+LK+LRRTR YM+VYGAKDLILTGYTDSDFQTDKDSRKST GSV  L
Sbjct: 916  SNPGLDHWTAVKIVLKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTL 975

Query: 301  NGGAIVWRSIKQGCIADSTMEAEYVAACEATKEAVWLRKFLHDLEVVLNMNFSVIRYCDN 360
            NGGA+VWRSIKQGCIADSTMEAEYVAACEA KEAVWLRKFLHDLEVV NMN  +  YCDN
Sbjct: 976  NGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDN 1035

Query: 361  SGTVANSKEPRSHKRGKHIERKYHLI 386
            SG VANSKEPRSHKRGKHIERKYHLI
Sbjct: 1036 SGAVANSKEPRSHKRGKHIERKYHLI 1061

[Close]

BLAST of Cmc10g0274471 vs. ExPASy TrEMBL
Match: A0A5A7T2V9 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold56G00760 PE=4 SV=1)

HSP 1 Score: 689.5 bits (1778), Expect = 8.0e-195
Identity = 346/386 (89.64%), Postives = 357/386 (92.49%), Query Frame = 0


Query: 1    MLKSIRILLSIATFYNYEIWQMDVKLAFLNDNLEESIFMSQSEGFITKGQEQKVYKLNRS 60
            MLKSIRILLSIA FY+YEIWQMDVK AFLN NLEESIFMSQ EGFIT+GQEQKV KLNRS
Sbjct: 802  MLKSIRILLSIAKFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRS 861

Query: 61   IYGLKQASRSWNIRFDTAIKSYGFDQNVDKPCVYKKINKGKVAFLVLYVDDILLIGNDVG 120
            IYGLKQASRSWNIRFDTAIKSYGFDQNVD+PCVYKKINKGKVAFLVLYVDDILLIGNDVG
Sbjct: 862  IYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVG 921

Query: 121  YLTDVKTWLAAQFKMKDLGEAQYVLRIQIIRDCKNKMLALSQATYIDKMLT-YSMQNSKK 180
            YLTDVK WLAAQF+MKDLGE QYVL IQIIRD KNK LALSQATYIDK+L  YSMQNSKK
Sbjct: 922  YLTDVKAWLAAQFQMKDLGEGQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKK 981

Query: 181  GLLPFRHGVHLSKEQCPKTPQEVEDMRCIPYASAVGSLMYVMLCTRPDICYAVGIVSWYQ 240
            GLLPFRHGVHLSKEQ PKTPQEVEDMR IPYASAVGSLMY MLCTRPDICYAVGIVS YQ
Sbjct: 982  GLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQ 1041

Query: 241  SNPGLDHWTVVKIILKFLRRTRGYMVVYGAKDLILTGYTDSDFQTDKDSRKSTWGSVIIL 300
            SNPGLDHWT VKIILK+LRRTR YM+VYGAKDLILTGYT+SDFQTDKDSRKST  SV  L
Sbjct: 1042 SNPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYTNSDFQTDKDSRKSTSRSVFTL 1101

Query: 301  NGGAIVWRSIKQGCIADSTMEAEYVAACEATKEAVWLRKFLHDLEVVLNMNFSVIRYCDN 360
            NGGA+VWRSIKQGCIADSTMEAEYVAACEA KEAVWL+KFLHDLEVV NMN  +  YCDN
Sbjct: 1102 NGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLKKFLHDLEVVPNMNLPITLYCDN 1161

Query: 361  SGTVANSKEPRSHKRGKHIERKYHLI 386
            SG VANSKEPRSHKRGKHIERKYHLI
Sbjct: 1162 SGAVANSKEPRSHKRGKHIERKYHLI 1187

[Close]

BLAST of Cmc10g0274471 vs. ExPASy TrEMBL
Match: A0A5D3DI92 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G003980 PE=4 SV=1)

HSP 1 Score: 676.8 bits (1745), Expect = 5.4e-191
Identity = 339/386 (87.82%), Postives = 352/386 (91.19%), Query Frame = 0


Query: 1   MLKSIRILLSIATFYNYEIWQMDVKLAFLNDNLEESIFMSQSEGFITKGQEQKVYKLNRS 60
           MLKSIRILLSIATFY+YEIWQMDVK AFLNDNLEESIFMSQ EGFIT+GQEQKV KLNRS
Sbjct: 1   MLKSIRILLSIATFYDYEIWQMDVKTAFLNDNLEESIFMSQPEGFITQGQEQKVCKLNRS 60

Query: 61  IYGLKQASRSWNIRFDTAIKSYGFDQNVDKPCVYKKINKGKVAFLVLYVDDILLIGNDVG 120
           IYGLKQ+SRSWN+RFDTAIKSYGFDQNVD+PCVYKKINKGKVAFLVLYVDDILLIGNDVG
Sbjct: 61  IYGLKQSSRSWNMRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVG 120

Query: 121 YLTDVKTWLAAQFKMKDLGEAQYVLRIQIIRDCKNKMLALSQATYIDKMLT-YSMQNSKK 180
           YLTDVK WLA QF+MKDLGE QYVL IQIIRD KNK LALSQATYIDKML  YSMQNSKK
Sbjct: 121 YLTDVKAWLATQFQMKDLGETQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQNSKK 180

Query: 181 GLLPFRHGVHLSKEQCPKTPQEVEDMRCIPYASAVGSLMYVMLCTRPDICYAVGIVSWYQ 240
            LLPFRHGVHLSKEQCPKTPQE+EDMR I YASAVGSLMY ML TRPDICYAVGIVS Y 
Sbjct: 181 DLLPFRHGVHLSKEQCPKTPQEIEDMRRILYASAVGSLMYDMLYTRPDICYAVGIVSRYL 240

Query: 241 SNPGLDHWTVVKIILKFLRRTRGYMVVYGAKDLILTGYTDSDFQTDKDSRKSTWGSVIIL 300
            NPGLDHWT VKIILK+LRRTR YM+VYG KDLILTGYTDSDFQTDKDSRKST GSV  L
Sbjct: 241 FNPGLDHWTAVKIILKYLRRTRDYMLVYGGKDLILTGYTDSDFQTDKDSRKSTSGSVFTL 300

Query: 301 NGGAIVWRSIKQGCIADSTMEAEYVAACEATKEAVWLRKFLHDLEVVLNMNFSVIRYCDN 360
           N GA+VW SIKQGCIADSTMEAEY+AACEA KE VWLRKFLHDLEVV NMN S+  YCDN
Sbjct: 301 NRGAVVWHSIKQGCIADSTMEAEYIAACEAAKEVVWLRKFLHDLEVVPNMNLSITLYCDN 360

Query: 361 SGTVANSKEPRSHKRGKHIERKYHLI 386
           SG VANSKEPR+HKRGKHIERKYHLI
Sbjct: 361 SGAVANSKEPRNHKRGKHIERKYHLI 386

[Close]

BLAST of Cmc10g0274471 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 192.6 bits (488), Expect = 5.9e-49
Identity = 122/390 (31.28%), Postives = 208/390 (53.33%), Query Frame = 0


Query: 2   LKSIRILLSIATFYNYEIWQMDVKLAFLNDNLEESIFMSQSEGFITKGQE----QKVYKL 61
           L S++++L+I+  YN+ + Q+D+  AFLN +L+E I+M    G+  +  +      V  L
Sbjct: 173 LTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYL 232

Query: 62  NRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDKPCVYKKINKGKVAFLVLYVDDILLIGN 121
            +SIYGLKQASR W ++F   +  +GF Q+      + KI       +++YVDDI++  N
Sbjct: 233 KKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSN 292

Query: 122 DVGYLTDVKTWLAAQFKMKDLGEAQYVLRIQIIRDCKNKMLALSQATY-IDKMLTYSMQN 181
           +   + ++K+ L + FK++DLG  +Y L ++I R      + + Q  Y +D +    +  
Sbjct: 293 NDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAAG--INICQRKYALDLLDETGLLG 352

Query: 182 SKKGLLPFRHGVHLSKEQCPKTPQEVEDMRCIPYASAVGSLMYVMLCTRPDICYAVGIVS 241
            K   +P    V  S      +  +  D +   Y   +G LMY+ + TR DI +AV  +S
Sbjct: 353 CKPSSVPMDPSVTFSAH----SGGDFVDAKA--YRRLIGRLMYLQI-TRLDISFAVNKLS 412

Query: 242 WYQSNPGLDHWTVVKIILKFLRRTRGYMVVYGAK-DLILTGYTDSDFQTDKDSRKSTWGS 301
            +   P L H   V  IL +++ T G  + Y ++ ++ L  ++D+ FQ+ KD+R+ST G 
Sbjct: 413 QFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGY 472

Query: 302 VIILNGGAIVWRSIKQGCIADSTMEAEYVAACEATKEAVWLRKFLHDLEVVLNMNFSVIR 361
            + L    I W+S KQ  ++ S+ EAEY A   AT E +WL +F  +L++ L+     + 
Sbjct: 473 CMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSK--PTLL 532

Query: 362 YCDNSGTVANSKEPRSHKRGKHIERKYHLI 386
           +CDN+  +  +     H+R KHIE   H +
Sbjct: 533 FCDNTAAIHIATNAVFHERTKHIESDCHSV 551

[Close]

BLAST of Cmc10g0274471 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 96.3 bits (238), Expect = 5.8e-20
Identity = 76/236 (32.20%), Postives = 115/236 (48.73%), Query Frame = 0


Query: 104 FLVLYVDDILLIGNDVGYLTDVKTWLAAQFKMKDLGEAQYVLRIQIIRDCKNKMLALSQA 163
           +L+LYVDDILL G+    L  +   L++ F MKDLG   Y L IQI        L LSQ 
Sbjct: 2   YLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQI--KTHPSGLFLSQT 61

Query: 164 TYIDKMLTYSMQNSKKGL---LPFRHGVHLSKEQCPKTPQEVEDMRCIPYASAVGSLMYV 223
            Y +++L  +     K +   LP +    +S  + P    +  D R     S VG+L Y+
Sbjct: 62  KYAEQILNNAGMLDCKPMSTPLPLKLNSSVSTAKYP----DPSDFR-----SIVGALQYL 121

Query: 224 MLCTRPDICYAVGIVSWYQSNPGLDHWTVVKIILKFLRRTRGY-MVVYGAKDLILTGYTD 283
            L TRPDI YAV IV      P L  + ++K +L++++ T  + + ++    L +  + D
Sbjct: 122 TL-TRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCD 181

Query: 284 SDFQTDKDSRKSTWGSVIILNGGAIVWRSIKQGCIADSTMEAEYVAACEATKEAVW 336
           SD+     +R+ST G    L    I W + +Q  ++ S+ E EY A      E  W
Sbjct: 182 SDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

The following BLAST results are available for this feature:

BLAST of Cmc10g0274471 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0051544.1	1.0e-212	96.61	gag/pol protein [Cucumis melo var. makuwa] >TYK21279.1 gag/pol protein [Cucumis ...	[more]
KAA0025945.1	2.1e-197	90.67	gag/pol protein [Cucumis melo var. makuwa] >KAA0026303.1 gag/pol protein [Cucumi...	[more]
KAA0059226.1	2.1e-197	90.67	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0035907.1	1.7e-194	89.64	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0040367.1	1.1e-190	87.82	gag/pol protein [Cucumis melo var. makuwa] >TYK23337.1 gag/pol protein [Cucumis ...	[more]

BLAST of Cmc10g0274471 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	4.2e-92	46.11	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P04146	7.0e-55	34.35	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
Q9ZT94	3.7e-48	32.81	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
Q94HW2	4.6e-46	34.11	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
P25600	5.4e-31	31.53	Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain AT...	[more]

BLAST of Cmc10g0274471 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U8A7	5.0e-213	96.61	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold101G0034...	[more]
A0A5A7TZD0	1.0e-197	90.67	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G000...	[more]
A0A5A7UYE8	1.0e-197	90.67	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G0015...	[more]
A0A5A7T2V9	8.0e-195	89.64	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold56G00760...	[more]
A0A5D3DI92	5.4e-191	87.82	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G0039...	[more]

BLAST of Cmc10g0274471 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	5.9e-49	31.28	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00810.1	5.8e-20	32.20	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 2..171 e-value: 8.7E-43 score: 146.7
None	No IPR available	PANTHER	PTHR45895	FAMILY NOT NAMED	coord: 4..270
None	No IPR available	CDD	cd09272	RNase_HI_RT_Ty1	coord: 275..385 e-value: 1.00109E-46 score: 154.548
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 16..383

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc10g0274471.1	Cmc10g0274471.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
molecular_function	GO:0008234	cysteine-type peptidase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding