Cmc10g0273921 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc10g0273921
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Homeobox-leucine zipper protein HDG2
Location	CMiso1.1chr10: 7462482 .. 7465289 (+)
RNA-Seq Expression	Cmc10g0273921
Synteny	Cmc10g0273921

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTCTTCCTTTACTCTTTTCCCTTTCTTTTCTACCATCTCGACGAAAGGAACACTAAAAACCCCAACCTCACTCTTCTCCATCTCCACCTAGCCGACCACACAAAAGGACTTTTCTTCTCATCGACGGTGACCCACAACGTTTCGGTCAGTCACTAAAGGGAACGGCAGACCACGACGCATTTCGGCCATATGCTTTTCGGACGGCGACGTTTAAGCTAAGTAGAAGCTATACACGTTTAGGGCGACCCACATCGATTTGGTTATGCAAATCAAAAGATTAGATTTTCCAAACGATTTCTTCTTTGGAACTTCCACATCCTTTTACCAGGTACACTCTTCATCTCCTTCAATTCTTCTATTTCTTGGTTTGAATTTTTCTCTAGCGCTTCAACTTCAAAATTTCGTGTTTGCAGATTGAAGGGGGTTATGTTGAAGATGGAAGGGGAAAGAGTAAATTGGGATATTTTTTTTCTCATATTCCAAGCTCAACCCACTTTCTAATTTCTCATTTTGATAGAAACTCAATTCTTTAATTTTCCTAAAGAAGTTTTTATGGAATTTGCAGGAAAAATTAAGGATAATAACACAGGAGATTTGGCCGACAATCACTACCACATGTTTATGGTACTCTTTATTTATGTAGCATTCTCATGAAAAAGAAAAAGGGAGGAGTTTTTAAGATGATTTTTGGTGTTTCATTTTGACAGGAAGATATTGAATTGATGGATTCTATGGCGATGAATGCTGATCAGTTGTCCATTTCTTGGACCCGAATTTTGCCCAGTAAGTTCTCCCTCTTTACATTTTATTTTTCTTCGTTAAAAATCAATTATATATATATATATATATATATATATATATATATATATAATATAATTTTAGATGGTGTTTTATTGAAACAGAAAAAACTAGTCAATAAAATTTTTTGGAAGTCATATCCTCATCACCACCCTAATGTTTATATGGACTTTAACTTGGTAGATTGATCATTAGAGTTCAGCTTGCACATATGTTGCAGCATATCCAGTTGTTGTATGAAGAGTACATTCAGTTTCCAACCACTGTTCGTATCCAAAATATTTGCTTTCAATAAATATGGGAAATAAAGGTTGTCACCTTACCTTATCATGTAGCTTTTGTTGATAATTAGTTTTTTTCAACAAAATCATAGTTCAAGCTCTGCTTCATCACAAGCCATCTCTTCCCTATCATTTTTTTCAGCACAATTTCAATTAATCTATAAGCTAGAGTTCAGTAAAATGAACAAGAAGAGTTCATAATAAATGATCATAAGGAAGAAGAGAAACACACACATACAAATAAATTTTCTGATAAAGATGAGCTCGCTCTATGCTATCATCAAATTATCAATTCATTTAGTGTTGATATTTTTGTTATGAAATGCAATGGTAGGAAAGGGGAGGTCTTGATAGTTGCATTGATATAATAGATAACCAATTGTTAAGAAAGTATTGGATCTTCCTTTGGTGCATATTTATACTCTAGTTTAAATTGAATATGGAAGATAAGTTAGTTACATCTTCTCTATCAACTCATCTTAGAATTCCAATGGCCCATATCATTAGTATTTTATTGGATTTCACTTGTTTTTTGCATACGCACAGACAGTAATGGTACCTTATTCCCATTATTTGTGTTTTTGGGTTTGTCAGAATCAACGGTCAACAATATTCATATGGATTGTGTCAAGAGCTAAGACATTAGAAGTATTATCAATCAGCGTTGCTGGAAACTACAACGGATAATTACAAGTTGTAATTAATTAATTAAATTAAATTAAATATATAATATTCCTCCTCAATCCGTATTCCTCCTCAATCCCAAACATATATATTTCAATTATATATTAGTATATAGTTTCTAACAATATATATAAGTTTATTATTATTGAGTAAGATGACATCAAGTTGCAAGTGGCTTCTCCACAAGTTCCAACTTGGAAGAGCTATTTTGTGAGGTATTGTGAACAACATGGAGAGGGAACATGGGTTGTTGTTGACGTTTACTTAGACAATTTACGCCTAGCTCCTGCTTTTAGATGTAGAAGGTCATCCGGCTGCTTAACCCAAGAAATGCCCTACGGTTATTCTAAGGTAATTATTATTTTTTTAATGAACAAATTGAGATATTTTTACTATATATAGTAGTAAAAACAAATTACACGTTGTCTAATTATCAATCATTATATTTAATTTAAGTTTTAGAAAATTAGGCACTAAATTGGTGTGTGTGTTTTGAATGATATGTATAGGTTACATGGGCTGAGCATGTTGAGGTGGATGATTGTAGTGTCTACAGTTTATACAACCAACTAGTTAGCTCTGGCCACACGTTCAACGCAAAGCGTTGGATTGCCACGTTGGATCGTCAATGTGAAGTCCAGTATATGTGATTGTTCATTTCTTAGAGGGCCAAACACCATTATGTGAAGCTAAGAGATCATGTAGATAGCCAGGCGATCAGGTAATATCTATTTTTAGGCCACATTTTTTTTTTCTAGATGCCTTGTTATAATTCTTAAGATTAAATGGTTTATTTTTGATATTGTTTGTAGAATGATTGAAATCATATCGGGTTGAAAGCTAAGTGATTGTGTAAATAGCCAGCGACCATTGAAGGTTGAAGATTGAGAAGGCGTTTAGGATTTCTCATTTAAGTATTGTATTAAGATTTTTTTTCATGTATTGTTGTAAAATGTATAGATAAACACAATATTAATTTTCATTTTGTGTATATACAAATGTAAAAGACAAATATTATAGTTTCTAAAATAATATTAATTTTAT

mRNA sequence

TTTCTTCCTTTACTCTTTTCCCTTTCTTTTCTACCATCTCGACGAAAGGAACACTAAAAACCCCAACCTCACTCTTCTCCATCTCCACCTAGCCGACCACACAAAAGGACTTTTCTTCTCATCGACGGTGACCCACAACGTTTCGGTCAGTCACTAAAGGGAACGGCAGACCACGACGCATTTCGGCCATATGCTTTTCGGACGGCGACGTTTAAGCTAAGTAGAAGCTATACACGTTTAGGGCGACCCACATCGATTTGGTTATGCAAATCAAAAGATTAGATTTTCCAAACGATTTCTTCTTTGGAACTTCCACATCCTTTTACCAGATTGAAGGGGGTTATGTTGAAGATGGAAGGGGAAAGAGTAAATTGGGATATTTTTTTTCTCATATTCCAAGCTCAACCCACTTTCTAATTTCTCATTTTGATAGAAACTCAATTCTTTAATTTTCCTAAAGAAGTTTTTATGGAATTTGCAGGAAAAATTAAGGATAATAACACAGGAGATTTGGCCGACAATCACTACCACATGTTTATGGAAGATATTGAATTGATGGATTCTATGGCGATGAATGCTGATCAGTTGTCCATTTCTTGGACCCGAATTTTGCCCAATTGATCATTAGAGTTCAGCTTGCACATATGTTGCAGCATATCCAGTTGTTGTATGAAGAGTACATTCAGTTTCCAACCACTGTTCGTATCCAAAATATTTGCTTTCAATAAATATGGGAAATAAAGAATCAACGGTCAACAATATTCATATGGATTGTGTCAAGAGCTAAGACATTAGAAGTATTATCAATCAGCGTTGCTGGAAACTACAACGGATAATTACAAGTTGTAATTAATTAATTAAATTAAATTAAATATATAATATTCCTCCTCAATCCGTATTCCTCCTCAATCCCAAACATATATATTTCAATTATATATTAGTATATAGTTTCTAACAATATATATAAGTTTATTATTATTGAGTAAGATGACATCAAGTTGCAAGTGGCTTCTCCACAAGTTCCAACTTGGAAGAGCTATTTTGTGAGGTATTGTGAACAACATGGAGAGGGAACATGGGTTGTTGTTGACGTTTACTTAGACAATTTACGCCTAGCTCCTGCTTTTAGATGTAGAAGGTCATCCGGCTGCTTAACCCAAGAAATGCCCTACGGTTATTCTAAGGTTACATGGGCTGAGCATGTTGAGGTGGATGATTGTAGTGTCTACAGTTTATACAACCAACTAGTTAGCTCTGGCCACACGTTCAACGCAAAGCGTTGGATTGCCACGTTGGATCGTCAATGTGAAGTCCAGTATATGTGATTGTTCATTTCTTAGAGGGCCAAACACCATTATGTGAAGCTAAGAGATCATGTAGATAGCCAGGCGATCAGAATGATTGAAATCATATCGGGTTGAAAGCTAAGTGATTGTGTAAATAGCCAGCGACCATTGAAGGTTGAAGATTGAGAAGGCGTTTAGGATTTCTCATTTAAGTATTGTATTAAGATTTTTTTTCATGTATTGTTGTAAAATGTATAGATAAACACAATATTAATTTTCATTTTGTGTATATACAAATGTAAAAGACAAATATTATAGTTTCTAAAATAATATTAATTTTAT

Coding sequence (CDS)

ATGCCCTACGGTTATTCTAAGGTTACATGGGCTGAGCATGTTGAGGTGGATGATTGTAGTGTCTACAGTTTATACAACCAACTAGTTAGCTCTGGCCACACGTTCAACGCAAAGCGTTGGATTGCCACGTTGGATCGTCAATGTGAAGTCCAGTATATGTGA

Protein sequence

MPYGYSKVTWAEHVEVDDCSVYSLYNQLVSSGHTFNAKRWIATLDRQCEVQYM

Homology

[Close]

BLAST of Cmc10g0273921 vs. NCBI nr
Match: KAA0051620.1 (homeobox-leucine zipper protein HDG2 [Cucumis melo var. makuwa] >TYK30794.1 homeobox-leucine zipper protein HDG2 [Cucumis melo var. makuwa])

HSP 1 Score: 117.1 bits (292), Expect = 4.7e-23
Identity = 52/53 (98.11%), Postives = 53/53 (100.00%), Query Frame = 0


Query: 1   MPYGYSKVTWAEHVEVDDCSVYSLYNQLVSSGHTFNAKRWIATLDRQCEVQYM 54
           MPYGYSKVTWAEHVEVDDCSV+SLYNQLVSSGHTFNAKRWIATLDRQCEVQYM
Sbjct: 242 MPYGYSKVTWAEHVEVDDCSVHSLYNQLVSSGHTFNAKRWIATLDRQCEVQYM 294

[Close]

BLAST of Cmc10g0273921 vs. NCBI nr
Match: TYK07095.1 (homeobox-leucine zipper protein HDG2 [Cucumis melo var. makuwa])

HSP 1 Score: 93.6 bits (231), Expect = 5.5e-16
Identity = 42/49 (85.71%), Postives = 43/49 (87.76%), Query Frame = 0


Query: 1   MPYGYSKVTWAEHVEVDDCSVYSLYNQLVSSGHTFNAKRWIATLDRQCE 50
           MP GYSKVTW EHVEVDD  V+SLYNQLVSSGH F AKRWIATLDRQCE
Sbjct: 449 MPNGYSKVTWVEHVEVDDRGVHSLYNQLVSSGHAFGAKRWIATLDRQCE 497

[Close]

BLAST of Cmc10g0273921 vs. NCBI nr
Match: XP_038888692.1 (homeobox-leucine zipper protein HDG2-like [Benincasa hispida])

HSP 1 Score: 93.6 bits (231), Expect = 5.5e-16
Identity = 42/49 (85.71%), Postives = 43/49 (87.76%), Query Frame = 0


Query: 1   MPYGYSKVTWAEHVEVDDCSVYSLYNQLVSSGHTFNAKRWIATLDRQCE 50
           MP GYSKVTW EHVEVDD  V+SLYNQLVSSGH F AKRWIATLDRQCE
Sbjct: 447 MPNGYSKVTWVEHVEVDDRGVHSLYNQLVSSGHAFGAKRWIATLDRQCE 495

[Close]

BLAST of Cmc10g0273921 vs. NCBI nr
Match: KAA0040254.1 (homeobox-leucine zipper protein HDG2 [Cucumis melo var. makuwa])

HSP 1 Score: 93.6 bits (231), Expect = 5.5e-16
Identity = 42/49 (85.71%), Postives = 43/49 (87.76%), Query Frame = 0


Query: 1   MPYGYSKVTWAEHVEVDDCSVYSLYNQLVSSGHTFNAKRWIATLDRQCE 50
           MP GYSKVTW EHVEVDD  V+SLYNQLVSSGH F AKRWIATLDRQCE
Sbjct: 449 MPNGYSKVTWVEHVEVDDRGVHSLYNQLVSSGHAFGAKRWIATLDRQCE 497

[Close]

BLAST of Cmc10g0273921 vs. NCBI nr
Match: XP_004144488.1 (homeobox-leucine zipper protein HDG2 [Cucumis sativus] >KGN43533.1 hypothetical protein Csa_020348 [Cucumis sativus])

HSP 1 Score: 93.6 bits (231), Expect = 5.5e-16
Identity = 42/49 (85.71%), Postives = 43/49 (87.76%), Query Frame = 0


Query: 1   MPYGYSKVTWAEHVEVDDCSVYSLYNQLVSSGHTFNAKRWIATLDRQCE 50
           MP GYSKVTW EHVEVDD  V+SLYNQLVSSGH F AKRWIATLDRQCE
Sbjct: 449 MPNGYSKVTWVEHVEVDDRGVHSLYNQLVSSGHAFGAKRWIATLDRQCE 497

[Close]

BLAST of Cmc10g0273921 vs. ExPASy Swiss-Prot
Match: Q94C37 (Homeobox-leucine zipper protein HDG2 OS=Arabidopsis thaliana OX=3702 GN=HDG2 PE=1 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 1.7e-15
Identity = 34/49 (69.39%), Postives = 40/49 (81.63%), Query Frame = 0


Query: 1   MPYGYSKVTWAEHVEVDDCSVYSLYNQLVSSGHTFNAKRWIATLDRQCE 50
           +P GYSKVTW EHVEVDD  V++LY  +VS+GH F AKRW+A LDRQCE
Sbjct: 416 LPNGYSKVTWVEHVEVDDRGVHNLYKHMVSTGHAFGAKRWVAILDRQCE 464

[Close]

BLAST of Cmc10g0273921 vs. ExPASy Swiss-Prot
Match: Q6ZAR0 (Homeobox-leucine zipper protein ROC1 OS=Oryza sativa subsp. japonica OX=39947 GN=ROC1 PE=2 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 2.2e-15
Identity = 35/49 (71.43%), Postives = 40/49 (81.63%), Query Frame = 0


Query: 1   MPYGYSKVTWAEHVEVDDCSVYSLYNQLVSSGHTFNAKRWIATLDRQCE 50
           MP GYSKVTW EHVEVDD SV+++Y  LV+SG  F AKRW+ TLDRQCE
Sbjct: 470 MPNGYSKVTWVEHVEVDDSSVHNIYKPLVNSGLAFGAKRWVGTLDRQCE 518

[Close]

BLAST of Cmc10g0273921 vs. ExPASy Swiss-Prot
Match: Q0J9X2 (Homeobox-leucine zipper protein ROC2 OS=Oryza sativa subsp. japonica OX=39947 GN=ROC2 PE=2 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 1.1e-14
Identity = 34/49 (69.39%), Postives = 40/49 (81.63%), Query Frame = 0


Query: 1   MPYGYSKVTWAEHVEVDDCSVYSLYNQLVSSGHTFNAKRWIATLDRQCE 50
           MP GYSKVTW EHVEVDD SV+++Y  LV+SG  F A+RW+ TLDRQCE
Sbjct: 471 MPNGYSKVTWVEHVEVDDRSVHNIYKLLVNSGLAFGARRWVGTLDRQCE 519

[Close]

BLAST of Cmc10g0273921 vs. ExPASy Swiss-Prot
Match: Q93V99 (Homeobox-leucine zipper protein PROTODERMAL FACTOR 2 OS=Arabidopsis thaliana OX=3702 GN=PDF2 PE=1 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 3.2e-14
Identity = 33/49 (67.35%), Postives = 40/49 (81.63%), Query Frame = 0


Query: 1   MPYGYSKVTWAEHVEVDDCSVYSLYNQLVSSGHTFNAKRWIATLDRQCE 50
           +P GYSKVTW EH+EVDD SV+++Y  LV SG  F AKRW+ATL+RQCE
Sbjct: 424 LPNGYSKVTWIEHMEVDDRSVHNMYKPLVQSGLAFGAKRWVATLERQCE 472

[Close]

BLAST of Cmc10g0273921 vs. ExPASy Swiss-Prot
Match: Q8RWU4 (Homeobox-leucine zipper protein MERISTEM L1 OS=Arabidopsis thaliana OX=3702 GN=ATML1 PE=1 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 7.0e-14
Identity = 32/46 (69.57%), Postives = 39/46 (84.78%), Query Frame = 0


Query: 4   GYSKVTWAEHVEVDDCSVYSLYNQLVSSGHTFNAKRWIATLDRQCE 50
           GYSKVTW EH+EVDD SV+++Y  LV++G  F AKRW+ATLDRQCE
Sbjct: 435 GYSKVTWVEHIEVDDRSVHNMYKPLVNTGLAFGAKRWVATLDRQCE 480

[Close]

BLAST of Cmc10g0273921 vs. ExPASy TrEMBL
Match: A0A5A7U8Z1 (Homeobox-leucine zipper protein HDG2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold267G00190 PE=3 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 2.3e-23
Identity = 52/53 (98.11%), Postives = 53/53 (100.00%), Query Frame = 0


Query: 1   MPYGYSKVTWAEHVEVDDCSVYSLYNQLVSSGHTFNAKRWIATLDRQCEVQYM 54
           MPYGYSKVTWAEHVEVDDCSV+SLYNQLVSSGHTFNAKRWIATLDRQCEVQYM
Sbjct: 242 MPYGYSKVTWAEHVEVDDCSVHSLYNQLVSSGHTFNAKRWIATLDRQCEVQYM 294

[Close]

BLAST of Cmc10g0273921 vs. ExPASy TrEMBL
Match: A0A5A7T9U8 (Homeobox-leucine zipper protein HDG2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold888G00400 PE=3 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 2.7e-16
Identity = 42/49 (85.71%), Postives = 43/49 (87.76%), Query Frame = 0


Query: 1   MPYGYSKVTWAEHVEVDDCSVYSLYNQLVSSGHTFNAKRWIATLDRQCE 50
           MP GYSKVTW EHVEVDD  V+SLYNQLVSSGH F AKRWIATLDRQCE
Sbjct: 449 MPNGYSKVTWVEHVEVDDRGVHSLYNQLVSSGHAFGAKRWIATLDRQCE 497

[Close]

BLAST of Cmc10g0273921 vs. ExPASy TrEMBL
Match: A0A5D3C6P4 (Homeobox-leucine zipper protein HDG2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G004130 PE=3 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 2.7e-16
Identity = 42/49 (85.71%), Postives = 43/49 (87.76%), Query Frame = 0


Query: 1   MPYGYSKVTWAEHVEVDDCSVYSLYNQLVSSGHTFNAKRWIATLDRQCE 50
           MP GYSKVTW EHVEVDD  V+SLYNQLVSSGH F AKRWIATLDRQCE
Sbjct: 449 MPNGYSKVTWVEHVEVDDRGVHSLYNQLVSSGHAFGAKRWIATLDRQCE 497

[Close]

BLAST of Cmc10g0273921 vs. ExPASy TrEMBL
Match: A0A0A0K266 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G044240 PE=3 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 2.7e-16
Identity = 42/49 (85.71%), Postives = 43/49 (87.76%), Query Frame = 0


Query: 1   MPYGYSKVTWAEHVEVDDCSVYSLYNQLVSSGHTFNAKRWIATLDRQCE 50
           MP GYSKVTW EHVEVDD  V+SLYNQLVSSGH F AKRWIATLDRQCE
Sbjct: 449 MPNGYSKVTWVEHVEVDDRGVHSLYNQLVSSGHAFGAKRWIATLDRQCE 497

[Close]

BLAST of Cmc10g0273921 vs. ExPASy TrEMBL
Match: A0A1S3C111 (homeobox-leucine zipper protein HDG2 OS=Cucumis melo OX=3656 GN=LOC103495586 PE=3 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 2.7e-16
Identity = 42/49 (85.71%), Postives = 43/49 (87.76%), Query Frame = 0


Query: 1   MPYGYSKVTWAEHVEVDDCSVYSLYNQLVSSGHTFNAKRWIATLDRQCE 50
           MP GYSKVTW EHVEVDD  V+SLYNQLVSSGH F AKRWIATLDRQCE
Sbjct: 449 MPNGYSKVTWVEHVEVDDRGVHSLYNQLVSSGHAFGAKRWIATLDRQCE 497

[Close]

BLAST of Cmc10g0273921 vs. TAIR 10
Match: AT1G05230.1 (homeodomain GLABROUS 2 )

HSP 1 Score: 82.4 bits (202), Expect = 1.2e-16
Identity = 34/49 (69.39%), Postives = 40/49 (81.63%), Query Frame = 0


Query: 1   MPYGYSKVTWAEHVEVDDCSVYSLYNQLVSSGHTFNAKRWIATLDRQCE 50
           +P GYSKVTW EHVEVDD  V++LY  +VS+GH F AKRW+A LDRQCE
Sbjct: 416 LPNGYSKVTWVEHVEVDDRGVHNLYKHMVSTGHAFGAKRWVAILDRQCE 464

[Close]

BLAST of Cmc10g0273921 vs. TAIR 10
Match: AT1G05230.2 (homeodomain GLABROUS 2 )

HSP 1 Score: 82.4 bits (202), Expect = 1.2e-16
Identity = 34/49 (69.39%), Postives = 40/49 (81.63%), Query Frame = 0


Query: 1   MPYGYSKVTWAEHVEVDDCSVYSLYNQLVSSGHTFNAKRWIATLDRQCE 50
           +P GYSKVTW EHVEVDD  V++LY  +VS+GH F AKRW+A LDRQCE
Sbjct: 416 LPNGYSKVTWVEHVEVDDRGVHNLYKHMVSTGHAFGAKRWVAILDRQCE 464

[Close]

BLAST of Cmc10g0273921 vs. TAIR 10
Match: AT1G05230.3 (homeodomain GLABROUS 2 )

HSP 1 Score: 82.4 bits (202), Expect = 1.2e-16
Identity = 34/49 (69.39%), Postives = 40/49 (81.63%), Query Frame = 0


Query: 1   MPYGYSKVTWAEHVEVDDCSVYSLYNQLVSSGHTFNAKRWIATLDRQCE 50
           +P GYSKVTW EHVEVDD  V++LY  +VS+GH F AKRW+A LDRQCE
Sbjct: 416 LPNGYSKVTWVEHVEVDDRGVHNLYKHMVSTGHAFGAKRWVAILDRQCE 464

[Close]

BLAST of Cmc10g0273921 vs. TAIR 10
Match: AT1G05230.4 (homeodomain GLABROUS 2 )

HSP 1 Score: 82.4 bits (202), Expect = 1.2e-16
Identity = 34/49 (69.39%), Postives = 40/49 (81.63%), Query Frame = 0


Query: 1   MPYGYSKVTWAEHVEVDDCSVYSLYNQLVSSGHTFNAKRWIATLDRQCE 50
           +P GYSKVTW EHVEVDD  V++LY  +VS+GH F AKRW+A LDRQCE
Sbjct: 416 LPNGYSKVTWVEHVEVDDRGVHNLYKHMVSTGHAFGAKRWVAILDRQCE 464

[Close]

BLAST of Cmc10g0273921 vs. TAIR 10
Match: AT4G04890.1 (protodermal factor 2 )

HSP 1 Score: 78.2 bits (191), Expect = 2.2e-15
Identity = 33/49 (67.35%), Postives = 40/49 (81.63%), Query Frame = 0


Query: 1   MPYGYSKVTWAEHVEVDDCSVYSLYNQLVSSGHTFNAKRWIATLDRQCE 50
           +P GYSKVTW EH+EVDD SV+++Y  LV SG  F AKRW+ATL+RQCE
Sbjct: 424 LPNGYSKVTWIEHMEVDDRSVHNMYKPLVQSGLAFGAKRWVATLERQCE 472

The following BLAST results are available for this feature:

BLAST of Cmc10g0273921 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0051620.1	4.7e-23	98.11	homeobox-leucine zipper protein HDG2 [Cucumis melo var. makuwa] >TYK30794.1 home...	[more]
TYK07095.1	5.5e-16	85.71	homeobox-leucine zipper protein HDG2 [Cucumis melo var. makuwa]	[more]
XP_038888692.1	5.5e-16	85.71	homeobox-leucine zipper protein HDG2-like [Benincasa hispida]	[more]
KAA0040254.1	5.5e-16	85.71	homeobox-leucine zipper protein HDG2 [Cucumis melo var. makuwa]	[more]
XP_004144488.1	5.5e-16	85.71	homeobox-leucine zipper protein HDG2 [Cucumis sativus] >KGN43533.1 hypothetical ...	[more]

BLAST of Cmc10g0273921 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94C37	1.7e-15	69.39	Homeobox-leucine zipper protein HDG2 OS=Arabidopsis thaliana OX=3702 GN=HDG2 PE=...	[more]
Q6ZAR0	2.2e-15	71.43	Homeobox-leucine zipper protein ROC1 OS=Oryza sativa subsp. japonica OX=39947 GN...	[more]
Q0J9X2	1.1e-14	69.39	Homeobox-leucine zipper protein ROC2 OS=Oryza sativa subsp. japonica OX=39947 GN...	[more]
Q93V99	3.2e-14	67.35	Homeobox-leucine zipper protein PROTODERMAL FACTOR 2 OS=Arabidopsis thaliana OX=...	[more]
Q8RWU4	7.0e-14	69.57	Homeobox-leucine zipper protein MERISTEM L1 OS=Arabidopsis thaliana OX=3702 GN=A...	[more]

BLAST of Cmc10g0273921 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U8Z1	2.3e-23	98.11	Homeobox-leucine zipper protein HDG2 OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A5A7T9U8	2.7e-16	85.71	Homeobox-leucine zipper protein HDG2 OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A5D3C6P4	2.7e-16	85.71	Homeobox-leucine zipper protein HDG2 OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A0A0K266	2.7e-16	85.71	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G044240 PE=3 SV=1	[more]
A0A1S3C111	2.7e-16	85.71	homeobox-leucine zipper protein HDG2 OS=Cucumis melo OX=3656 GN=LOC103495586 PE=...	[more]

BLAST of Cmc10g0273921 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G05230.1	1.2e-16	69.39	homeodomain GLABROUS 2	[more]
AT1G05230.2	1.2e-16	69.39	homeodomain GLABROUS 2	[more]
AT1G05230.3	1.2e-16	69.39	homeodomain GLABROUS 2	[more]
AT1G05230.4	1.2e-16	69.39	homeodomain GLABROUS 2	[more]
AT4G04890.1	2.2e-15	67.35	protodermal factor 2	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002913	START domain	PFAM	PF01852	START	coord: 4..49 e-value: 3.2E-10 score: 39.8
IPR002913	START domain	PROSITE	PS50848	START	coord: 1..53 score: 10.220045
IPR042160	Homeobox-leucine zipper protein GLABRA2/ANL2/PDF2/ATML1-like	PANTHER	PTHR45654	HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1	coord: 1..49
None	No IPR available	PANTHER	PTHR45654:SF21	HOMEOBOX LEUCINE ZIPPER PROTEIN	coord: 1..49

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc10g0273921.1	Cmc10g0273921.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
cellular_component	GO:0016020	membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds
molecular_function	GO:0008289	lipid binding