Cmc10g0270571 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc10g0270571
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Transcription termination factor MTERF8
Location	CMiso1.1chr10: 4674031 .. 4675835 (+)
RNA-Seq Expression	Cmc10g0270571
Synteny	Cmc10g0270571

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAAAAAGAGGAAAAAGAAGAAGAAGAAGAAGACTCGCCGTGGAGAGAGAAGCAAAATAAAAACTTCTAAAAATGCATTATTTAATTGCAATATTAATGCAATTTTTCCTAAAACGCCCAAATTTGTGGCCTTGGAATTCAAAACCCTAACCAAAACCCTTACTTGATTTTCTTCGATCCCATCCCGAAATGTTCAAATTTTCCTCCACATTTCTTCTACATTTCATCCAAAAACGTTTTTTCAATACCGTTTCTACTTCTACATTGCCTTTAGCCTCCATTTCTACTGTCGAATTCCTCACAAATTCATGTGGCCTTTCTTCAGGATCTCCTACTTCCGCCGGTCGAAAGCTCCAGTTCGATGAAAAAAACACCCAGCAGTACGGAGCCGTTATCGATTTCTTGAAATCACATGGATTCGAGAACACACAGATTGCCAATTTGGTCTCGAGGCGACCTTCGATCCTTCAATCCAAGGTATCCACCAATCTGAAGCCTAGATTTGAGTTCCTCCAGGAAATCGGGCTCGTCGGACCTTTACTTCCTAAGTTTATTCTATCAACCCCATGGGTTCTTGGCAGCAGCTTAGATTCTCGGTTGAAACCATCATTTTTTTTCATAAAGGAAATTCTGGAATCGGATGAACAAGTAACTGCTGCTATTTGTCGTTATCCAAGCCTTCTAGTTTGTGATTTGAAGGGTAATTTGAAATCTAACATTGATATTTTGGCCAGTGAAGGAGTACCTTCTAGGAATATAGCGAGAATGATTGTATGGAAGCCTAGAACTATTACGCGAAAGGTTGATAGAATGATTAATGCAGTGAAAAGGGTTAAAGAATTAGGCATTGAACCAAAGGCTTGCATGTTTGTTTATGCAGTTATAGTAAGGCTTTCAATGAGTGATTCAACTTGGAAGAAGAAAATAACTGTTATGAAGAGTTTAGGATGGTCTGAGAAGGAGATTTTTACAGCATTTAAGAAAGATCCAACTTATTTACATTGTTCAGAGGAGAAAATGAGGGATGTTGCAGATTTCTGTTTCAACACTGCAAAGTTGGATCCAGGAACCGTAATTTCTTACCCTATGTTCTTCAAGTTGTCGGTCGACAAGCGGCTCCGACTGAGGTACAAAGTTCTTGAGGTTTTGAAGGTGAAAAATCTCCTCAAGAACGAAAAGATAACTCTTACTGGGTGGTTTATGCAAGGGGAGAGAGAATTTGTGAAGAATAATGTTGTTAAGCATTTGGATGAAATCCCAAATCTGATGGATATATACCGGGGCAATGACGCATCTGAAACCAAATCTGTTTCATAGGATTGGAGAGTTGAAAGTTAAAATGTTGTTAAAGTCTAAATTTGAGCATCATGATCTCAAAGGGGAGAGCATTTTTGTTGTTATAGAGGCTACTGTTCTGTTTCAAATAACACTGTTTCATGGATAAACCTTATGCTTTGTGTTTTTAAGATAAAGGGGATTTGAATATTGTAGTCGAAGGGATGTAATACAATACATGTCCATATAACAATCCTATTATTTTCATATCTATGTTGCCGATTATATAACATCACCATAGTATATAAGGCCAATTTGAGTAGCCCAGTTAAAGTACCACTTCTTTTTGTTGCCATTATTGGATTTATTTTAAGAATTGACATTTTCAAATATAATAAAATAAACAAGAAAAGAGAAAAATATTGACAAAAACCAGTGATTTCTGTTCAACCCCATCCTCCCTTGATCAAGGTGATTTTCCATGCCAATCAAAGAAGGTGCAACGATGATATGATTGTACGAAACTTTTT

mRNA sequence

GAAAAAAGAGGAAAAAGAAGAAGAAGAAGAAGACTCGCCGTGGAGAGAGAAGCAAAATAAAAACTTCTAAAAATGCATTATTTAATTGCAATATTAATGCAATTTTTCCTAAAACGCCCAAATTTGTGGCCTTGGAATTCAAAACCCTAACCAAAACCCTTACTTGATTTTCTTCGATCCCATCCCGAAATGTTCAAATTTTCCTCCACATTTCTTCTACATTTCATCCAAAAACGTTTTTTCAATACCGTTTCTACTTCTACATTGCCTTTAGCCTCCATTTCTACTGTCGAATTCCTCACAAATTCATGTGGCCTTTCTTCAGGATCTCCTACTTCCGCCGGTCGAAAGCTCCAGTTCGATGAAAAAAACACCCAGCAGTACGGAGCCGTTATCGATTTCTTGAAATCACATGGATTCGAGAACACACAGATTGCCAATTTGGTCTCGAGGCGACCTTCGATCCTTCAATCCAAGGTATCCACCAATCTGAAGCCTAGATTTGAGTTCCTCCAGGAAATCGGGCTCGTCGGACCTTTACTTCCTAAGTTTATTCTATCAACCCCATGGGTTCTTGGCAGCAGCTTAGATTCTCGGTTGAAACCATCATTTTTTTTCATAAAGGAAATTCTGGAATCGGATGAACAAGTAACTGCTGCTATTTGTCGTTATCCAAGCCTTCTAGTTTGTGATTTGAAGGGTAATTTGAAATCTAACATTGATATTTTGGCCAGTGAAGGAGTACCTTCTAGGAATATAGCGAGAATGATTGTATGGAAGCCTAGAACTATTACGCGAAAGGTTGATAGAATGATTAATGCAGTGAAAAGGGTTAAAGAATTAGGCATTGAACCAAAGGCTTGCATGTTTGTTTATGCAGTTATAGTAAGGCTTTCAATGAGTGATTCAACTTGGAAGAAGAAAATAACTGTTATGAAGAGTTTAGGATGGTCTGAGAAGGAGATTTTTACAGCATTTAAGAAAGATCCAACTTATTTACATTGTTCAGAGGAGAAAATGAGGGATGTTGCAGATTTCTGTTTCAACACTGCAAAGTTGGATCCAGGAACCGTAATTTCTTACCCTATGTTCTTCAAGTTGTCGGTCGACAAGCGGCTCCGACTGAGGTACAAAGTTCTTGAGGTTTTGAAGGTGAAAAATCTCCTCAAGAACGAAAAGATAACTCTTACTGGGTGGTTTATGCAAGGGGAGAGAGAATTTGTGAAGAATAATGTTGTTAAGCATTTGGATGAAATCCCAAATCTGATGGATATATACCGGGGCAATGACGCATCTGAAACCAAATCTGTTTCATAGGATTGGAGAGTTGAAAGTTAAAATGTTGTTAAAGTCTAAATTTGAGCATCATGATCTCAAAGGGGAGAGCATTTTTGTTGTTATAGAGGCTACTGTTCTGTTTCAAATAACACTGTTTCATGGATAAACCTTATGCTTTGTGTTTTTAAGATAAAGGGGATTTGAATATTGTAGTCGAAGGGATGTAATACAATACATGTCCATATAACAATCCTATTATTTTCATATCTATGTTGCCGATTATATAACATCACCATAGTATATAAGGCCAATTTGAGTAGCCCAGTTAAAGTACCACTTCTTTTTGTTGCCATTATTGGATTTATTTTAAGAATTGACATTTTCAAATATAATAAAATAAACAAGAAAAGAGAAAAATATTGACAAAAACCAGTGATTTCTGTTCAACCCCATCCTCCCTTGATCAAGGTGATTTTCCATGCCAATCAAAGAAGGTGCAACGATGATATGATTGTACGAAACTTTTT

Coding sequence (CDS)

ATGTTCAAATTTTCCTCCACATTTCTTCTACATTTCATCCAAAAACGTTTTTTCAATACCGTTTCTACTTCTACATTGCCTTTAGCCTCCATTTCTACTGTCGAATTCCTCACAAATTCATGTGGCCTTTCTTCAGGATCTCCTACTTCCGCCGGTCGAAAGCTCCAGTTCGATGAAAAAAACACCCAGCAGTACGGAGCCGTTATCGATTTCTTGAAATCACATGGATTCGAGAACACACAGATTGCCAATTTGGTCTCGAGGCGACCTTCGATCCTTCAATCCAAGGTATCCACCAATCTGAAGCCTAGATTTGAGTTCCTCCAGGAAATCGGGCTCGTCGGACCTTTACTTCCTAAGTTTATTCTATCAACCCCATGGGTTCTTGGCAGCAGCTTAGATTCTCGGTTGAAACCATCATTTTTTTTCATAAAGGAAATTCTGGAATCGGATGAACAAGTAACTGCTGCTATTTGTCGTTATCCAAGCCTTCTAGTTTGTGATTTGAAGGGTAATTTGAAATCTAACATTGATATTTTGGCCAGTGAAGGAGTACCTTCTAGGAATATAGCGAGAATGATTGTATGGAAGCCTAGAACTATTACGCGAAAGGTTGATAGAATGATTAATGCAGTGAAAAGGGTTAAAGAATTAGGCATTGAACCAAAGGCTTGCATGTTTGTTTATGCAGTTATAGTAAGGCTTTCAATGAGTGATTCAACTTGGAAGAAGAAAATAACTGTTATGAAGAGTTTAGGATGGTCTGAGAAGGAGATTTTTACAGCATTTAAGAAAGATCCAACTTATTTACATTGTTCAGAGGAGAAAATGAGGGATGTTGCAGATTTCTGTTTCAACACTGCAAAGTTGGATCCAGGAACCGTAATTTCTTACCCTATGTTCTTCAAGTTGTCGGTCGACAAGCGGCTCCGACTGAGGTACAAAGTTCTTGAGGTTTTGAAGGTGAAAAATCTCCTCAAGAACGAAAAGATAACTCTTACTGGGTGGTTTATGCAAGGGGAGAGAGAATTTGTGAAGAATAATGTTGTTAAGCATTTGGATGAAATCCCAAATCTGATGGATATATACCGGGGCAATGACGCATCTGAAACCAAATCTGTTTCATAG

Protein sequence

MFKFSSTFLLHFIQKRFFNTVSTSTLPLASISTVEFLTNSCGLSSGSPTSAGRKLQFDEKNTQQYGAVIDFLKSHGFENTQIANLVSRRPSILQSKVSTNLKPRFEFLQEIGLVGPLLPKFILSTPWVLGSSLDSRLKPSFFFIKEILESDEQVTAAICRYPSLLVCDLKGNLKSNIDILASEGVPSRNIARMIVWKPRTITRKVDRMINAVKRVKELGIEPKACMFVYAVIVRLSMSDSTWKKKITVMKSLGWSEKEIFTAFKKDPTYLHCSEEKMRDVADFCFNTAKLDPGTVISYPMFFKLSVDKRLRLRYKVLEVLKVKNLLKNEKITLTGWFMQGEREFVKNNVVKHLDEIPNLMDIYRGNDASETKSVS

Homology

[Close]

BLAST of Cmc10g0270571 vs. NCBI nr
Match: KAA0034157.1 (transcription termination factor MTERF8 [Cucumis melo var. makuwa] >TYK15762.1 transcription termination factor MTERF8 [Cucumis melo var. makuwa])

HSP 1 Score: 737.3 bits (1902), Expect = 6.7e-209
Identity = 375/375 (100.00%), Postives = 375/375 (100.00%), Query Frame = 0


Query: 1   MFKFSSTFLLHFIQKRFFNTVSTSTLPLASISTVEFLTNSCGLSSGSPTSAGRKLQFDEK 60
           MFKFSSTFLLHFIQKRFFNTVSTSTLPLASISTVEFLTNSCGLSSGSPTSAGRKLQFDEK
Sbjct: 1   MFKFSSTFLLHFIQKRFFNTVSTSTLPLASISTVEFLTNSCGLSSGSPTSAGRKLQFDEK 60

Query: 61  NTQQYGAVIDFLKSHGFENTQIANLVSRRPSILQSKVSTNLKPRFEFLQEIGLVGPLLPK 120
           NTQQYGAVIDFLKSHGFENTQIANLVSRRPSILQSKVSTNLKPRFEFLQEIGLVGPLLPK
Sbjct: 61  NTQQYGAVIDFLKSHGFENTQIANLVSRRPSILQSKVSTNLKPRFEFLQEIGLVGPLLPK 120

Query: 121 FILSTPWVLGSSLDSRLKPSFFFIKEILESDEQVTAAICRYPSLLVCDLKGNLKSNIDIL 180
           FILSTPWVLGSSLDSRLKPSFFFIKEILESDEQVTAAICRYPSLLVCDLKGNLKSNIDIL
Sbjct: 121 FILSTPWVLGSSLDSRLKPSFFFIKEILESDEQVTAAICRYPSLLVCDLKGNLKSNIDIL 180

Query: 181 ASEGVPSRNIARMIVWKPRTITRKVDRMINAVKRVKELGIEPKACMFVYAVIVRLSMSDS 240
           ASEGVPSRNIARMIVWKPRTITRKVDRMINAVKRVKELGIEPKACMFVYAVIVRLSMSDS
Sbjct: 181 ASEGVPSRNIARMIVWKPRTITRKVDRMINAVKRVKELGIEPKACMFVYAVIVRLSMSDS 240

Query: 241 TWKKKITVMKSLGWSEKEIFTAFKKDPTYLHCSEEKMRDVADFCFNTAKLDPGTVISYPM 300
           TWKKKITVMKSLGWSEKEIFTAFKKDPTYLHCSEEKMRDVADFCFNTAKLDPGTVISYPM
Sbjct: 241 TWKKKITVMKSLGWSEKEIFTAFKKDPTYLHCSEEKMRDVADFCFNTAKLDPGTVISYPM 300

Query: 301 FFKLSVDKRLRLRYKVLEVLKVKNLLKNEKITLTGWFMQGEREFVKNNVVKHLDEIPNLM 360
           FFKLSVDKRLRLRYKVLEVLKVKNLLKNEKITLTGWFMQGEREFVKNNVVKHLDEIPNLM
Sbjct: 301 FFKLSVDKRLRLRYKVLEVLKVKNLLKNEKITLTGWFMQGEREFVKNNVVKHLDEIPNLM 360

Query: 361 DIYRGNDASETKSVS 376
           DIYRGNDASETKSVS
Sbjct: 361 DIYRGNDASETKSVS 375

[Close]

BLAST of Cmc10g0270571 vs. NCBI nr
Match: KAA0034119.1 (transcription termination factor MTERF8 [Cucumis melo var. makuwa] >TYK15801.1 transcription termination factor MTERF8 [Cucumis melo var. makuwa])

HSP 1 Score: 672.9 bits (1735), Expect = 1.6e-189
Identity = 343/375 (91.47%), Postives = 353/375 (94.13%), Query Frame = 0


Query: 1   MFKFSSTFLLHFIQKRFFNTVSTSTLPLASISTVEFLTNSCGLSSGSPTSAGRKLQFDEK 60
           M K SS+FLLHF Q R  NTVSTSTLPL S+ST++FLTNSCGLSSGSPTSAGRKLQFDEK
Sbjct: 1   MSKISSSFLLHFFQNRSLNTVSTSTLPLPSVSTIQFLTNSCGLSSGSPTSAGRKLQFDEK 60

Query: 61  NTQQYGAVIDFLKSHGFENTQIANLVSRRPSILQSKVSTNLKPRFEFLQEIGLVGPLLPK 120
           NTQQYGAVIDFLKSHGFENTQIANLVSRRPSILQSKVS NLKPRFEFLQEIGLVGPLLPK
Sbjct: 61  NTQQYGAVIDFLKSHGFENTQIANLVSRRPSILQSKVSKNLKPRFEFLQEIGLVGPLLPK 120

Query: 121 FILSTPWVLGSSLDSRLKPSFFFIKEILESDEQVTAAICRYPSLLVCDLKGNLKSNIDIL 180
           FILSTPWVLGSSLDS+LKPSFFFIKEILESDEQVTAAICRYPSLLVCDLKGNLKSNIDIL
Sbjct: 121 FILSTPWVLGSSLDSQLKPSFFFIKEILESDEQVTAAICRYPSLLVCDLKGNLKSNIDIL 180

Query: 181 ASEGVPSRNIARMIVWKPRTITRKVDRMINAVKRVKELGIEPKACMFVYAVIVRLSMSDS 240
           ASEGVPSRNIARMI WKPRTITRKVD MINAVK VKELGIEPKA MF YAV VRLSMSDS
Sbjct: 181 ASEGVPSRNIARMIAWKPRTITRKVDIMINAVKAVKELGIEPKARMFAYAVFVRLSMSDS 240

Query: 241 TWKKKITVMKSLGWSEKEIFTAFKKDPTYLHCSEEKMRDVADFCFNTAKLDPGTVISYPM 300
           TWKKK+TVMKSLGWSEKEIFTAFKKDP YL CSE+KMRDVADFCFNTAKLDPGTVISYP+
Sbjct: 241 TWKKKVTVMKSLGWSEKEIFTAFKKDPNYLGCSEKKMRDVADFCFNTAKLDPGTVISYPV 300

Query: 301 FFKLSVDKRLRLRYKVLEVLKVKNLLKNEKITLTGWFMQGEREFVKNNVVKHLDEIPNLM 360
           FFK SVDKRLR RYKVLEVLKVKNLLKN+KI L  WF QGEREFV+NNVVKHLDEIPNLM
Sbjct: 301 FFKYSVDKRLRPRYKVLEVLKVKNLLKNKKIALAWWFTQGEREFVQNNVVKHLDEIPNLM 360

Query: 361 DIYRGNDASETKSVS 376
           DIYRGNDASETKSVS
Sbjct: 361 DIYRGNDASETKSVS 375

[Close]

BLAST of Cmc10g0270571 vs. NCBI nr
Match: XP_008445929.1 (PREDICTED: transcription termination factor MTERF8, chloroplastic-like [Cucumis melo] >KAA0034114.1 transcription termination factor MTERF8 [Cucumis melo var. makuwa] >TYK15807.1 transcription termination factor MTERF8 [Cucumis melo var. makuwa])

HSP 1 Score: 598.6 bits (1542), Expect = 3.7e-167
Identity = 306/374 (81.82%), Postives = 337/374 (90.11%), Query Frame = 0


Query: 1   MFKFSSTFLLHFIQKRFFNTVSTSTLPLASISTVEFLTNSCGLSSGSPTSAGRKLQFDEK 60
           M + SS+FLLHFIQ RF NT+STSTLPL S+ST++FLTNSCGLSSGSPTSAGRKLQFDEK
Sbjct: 1   MSRLSSSFLLHFIQNRFLNTISTSTLPLPSVSTIQFLTNSCGLSSGSPTSAGRKLQFDEK 60

Query: 61  NTQQYGAVIDFLKSHGFENTQIANLVSRRPSILQSKVSTNLKPRFEFLQEIGLVGPLLPK 120
           NTQQYGAVIDFLKSHGFEN+QIANLVSRRPSILQSKVSTNLKPRFEFLQEIGLVG LL K
Sbjct: 61  NTQQYGAVIDFLKSHGFENSQIANLVSRRPSILQSKVSTNLKPRFEFLQEIGLVGTLLLK 120

Query: 121 FILSTPWVLGSSLDSRLKPSFFFIKEILESDEQVTAAICRYPSLLVCDLKGNLKSNIDIL 180
            ILSTPWVLGSSLDS+LKPSF F+KEILESDEQVTAAICRYPSLL+CDLK NLK  +D+L
Sbjct: 121 CILSTPWVLGSSLDSQLKPSFIFLKEILESDEQVTAAICRYPSLLICDLKVNLKPQLDVL 180

Query: 181 ASEGVPSRNIARMIVWKPRTITRKVDRMINAVKRVKELGIEPKACMFVYAVIVRLSMSDS 240
           ASEGVPSRNIA+MI   PR+I +KVDRM  AVK VKELGIEPKA MFVYAV++RLSMSDS
Sbjct: 181 ASEGVPSRNIAKMIEMNPRSIMQKVDRMTLAVKTVKELGIEPKARMFVYAVLIRLSMSDS 240

Query: 241 TWKKKITVMKSLGWSEKEIFTAFKKDPTYLHCSEEKMRDVADFCFNTAKLDPGTVISYPM 300
           TWKKKI VMKSLGWSEKEIF AFK+ P YL CSE+K+RDVADFCFNTAKLDPGT++SYP 
Sbjct: 241 TWKKKINVMKSLGWSEKEIFIAFKRHPNYLGCSEKKIRDVADFCFNTAKLDPGTLVSYPK 300

Query: 301 FFKLSVDKRLRLRYKVLEVLKVKNLLKNEKITLTGWFMQGEREFVKNNVVKHLDEIPNLM 360
            F+LS++KRL LRYKVLEVLKVKNLLKN+KI   G F+QGE+ FV+  VVKHLDEIPNLM
Sbjct: 301 LFRLSLEKRLPLRYKVLEVLKVKNLLKNKKI--AGLFLQGEKTFVEKYVVKHLDEIPNLM 360

Query: 361 DIYRGNDASETKSV 375
           DIYRGN  ++TKSV
Sbjct: 361 DIYRGNVEAKTKSV 372

[Close]

BLAST of Cmc10g0270571 vs. NCBI nr
Match: TYK15787.1 (transcription termination factor MTERF5 [Cucumis melo var. makuwa])

HSP 1 Score: 582.0 bits (1499), Expect = 3.6e-162
Identity = 296/375 (78.93%), Postives = 327/375 (87.20%), Query Frame = 0


Query: 1   MFKFSSTFLLHFIQKRFFNTVSTSTLPLASISTVEFLTNSCGLSSGSPTSAGRKLQFDEK 60
           M K SS+FLLHF   RF NT+ TSTLPLAS+ST++FLTNSCGLSSGSPTSAGRKLQF EK
Sbjct: 1   MSKISSSFLLHFFHNRFLNTIPTSTLPLASVSTIQFLTNSCGLSSGSPTSAGRKLQFGEK 60

Query: 61  NTQQYGAVIDFLKSHGFENTQIANLVSRRPSILQSKVSTNLKPRFEFLQEIGLVGPLLPK 120
           NTQQYGAVIDFLKSHGFEN+QIA LVSR+PSILQS+VS NLKP+FEFLQEIG VGPLLPK
Sbjct: 61  NTQQYGAVIDFLKSHGFENSQIAKLVSRQPSILQSRVSANLKPKFEFLQEIGFVGPLLPK 120

Query: 121 FILSTPWVLGSSLDSRLKPSFFFIKEILESDEQVTAAICRYPSLLVCDLKGNLKSNIDIL 180
            I+S+P +L  SLDS+LKPSF  +KE+L SDE+VTAAICR   LL  D KG +KSN D+L
Sbjct: 121 LIVSSPSILNKSLDSKLKPSFRLLKEMLGSDERVTAAICRASWLLTYDFKGVIKSNFDVL 180

Query: 181 ASEGVPSRNIARMIVWKPRTITRKVDRMINAVKRVKELGIEPKACMFVYAVIVRLSMSDS 240
            SEGVPSRNIA+MI W PRTI ++VD+MI  VK VKELGIEPKA MF  AV+VRL MSDS
Sbjct: 181 VSEGVPSRNIAKMIAWNPRTIMQRVDKMIQVVKNVKELGIEPKAGMFFQAVLVRLQMSDS 240

Query: 241 TWKKKITVMKSLGWSEKEIFTAFKKDPTYLHCSEEKMRDVADFCFNTAKLDPGTVISYPM 300
           TWKKKI VMKSLGWSEKEI TAFK+ P  L CSEEKMRDVADFCFNTAKLDPGT+IS P+
Sbjct: 241 TWKKKINVMKSLGWSEKEILTAFKRYPLCLTCSEEKMRDVADFCFNTAKLDPGTLISNPV 300

Query: 301 FFKLSVDKRLRLRYKVLEVLKVKNLLKNEKITLTGWFMQGEREFVKNNVVKHLDEIPNLM 360
           FFKLSV+KRLR RYKVLEVLKVKNLL+N+KI L  WFMQGEREFV+NNVVKHLDEIPNLM
Sbjct: 301 FFKLSVNKRLRPRYKVLEVLKVKNLLRNKKIALAWWFMQGEREFVENNVVKHLDEIPNLM 360

Query: 361 DIYRGNDASETKSVS 376
           DIYRGNDASET+SVS
Sbjct: 361 DIYRGNDASETQSVS 375

[Close]

BLAST of Cmc10g0270571 vs. NCBI nr
Match: KAA0034132.1 (transcription termination factor MTERF5 [Cucumis melo var. makuwa])

HSP 1 Score: 581.3 bits (1497), Expect = 6.2e-162
Identity = 296/375 (78.93%), Postives = 326/375 (86.93%), Query Frame = 0


Query: 1   MFKFSSTFLLHFIQKRFFNTVSTSTLPLASISTVEFLTNSCGLSSGSPTSAGRKLQFDEK 60
           M K SS+FLLHF   RF NT+ TSTLPLAS+ST++FLTNSCGLSSGSPTSAGRKLQF EK
Sbjct: 1   MSKISSSFLLHFFHNRFLNTIPTSTLPLASVSTIQFLTNSCGLSSGSPTSAGRKLQFGEK 60

Query: 61  NTQQYGAVIDFLKSHGFENTQIANLVSRRPSILQSKVSTNLKPRFEFLQEIGLVGPLLPK 120
           NTQQYGAVIDFLKSHGFEN QIA LVSR+PSILQS+VS NLKP+FEFLQEIG VGPLLPK
Sbjct: 61  NTQQYGAVIDFLKSHGFENPQIAKLVSRQPSILQSRVSANLKPKFEFLQEIGFVGPLLPK 120

Query: 121 FILSTPWVLGSSLDSRLKPSFFFIKEILESDEQVTAAICRYPSLLVCDLKGNLKSNIDIL 180
            I+S+P +L  SLDS+LKPSF  +KE+L SDE+VTAAICR   LL  D KG +KSN D+L
Sbjct: 121 LIVSSPSILNKSLDSKLKPSFRLLKEMLGSDERVTAAICRASWLLTYDFKGVIKSNFDVL 180

Query: 181 ASEGVPSRNIARMIVWKPRTITRKVDRMINAVKRVKELGIEPKACMFVYAVIVRLSMSDS 240
            SEGVPSRNIA+MI W PRTI ++VD+MI  VK VKELGIEPKA MF  AV+VRL MSDS
Sbjct: 181 VSEGVPSRNIAKMIAWNPRTIMQRVDKMIQVVKNVKELGIEPKAGMFFQAVLVRLQMSDS 240

Query: 241 TWKKKITVMKSLGWSEKEIFTAFKKDPTYLHCSEEKMRDVADFCFNTAKLDPGTVISYPM 300
           TWKKKI VMKSLGWSEKEI TAFK+ P  L CSEEKMRDVADFCFNTAKLDPGT+IS P+
Sbjct: 241 TWKKKINVMKSLGWSEKEILTAFKRYPLCLTCSEEKMRDVADFCFNTAKLDPGTLISNPV 300

Query: 301 FFKLSVDKRLRLRYKVLEVLKVKNLLKNEKITLTGWFMQGEREFVKNNVVKHLDEIPNLM 360
           FFKLSV+KRLR RYKVLEVLKVKNLL+N+KI L  WFMQGEREFV+NNVVKHLDEIPNLM
Sbjct: 301 FFKLSVNKRLRPRYKVLEVLKVKNLLRNKKIALAWWFMQGEREFVENNVVKHLDEIPNLM 360

Query: 361 DIYRGNDASETKSVS 376
           DIYRGNDASET+SVS
Sbjct: 361 DIYRGNDASETQSVS 375

[Close]

BLAST of Cmc10g0270571 vs. ExPASy Swiss-Prot
Match: F4JVI3 (Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF5 PE=1 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 7.9e-11
Identity = 58/270 (21.48%), Postives = 121/270 (44.81%), Query Frame = 0


Query: 71  FLKSHGFENTQIANLVSRRPSILQSKVSTNLKPRFEFLQEIGLVGPLLPKFILSTPWVLG 130
           +L   G    QI  +  +  +     +   +KP  EFL ++G+    +P  +   P + G
Sbjct: 202 YLLDLGLNLEQIKTITRKFAAFPYYSLDGKIKPVVEFLLDLGIPKSDIPTILCKRPQICG 261

Query: 131 SSLDSRLKPSFFFIKEILESDEQVTAAICRYPSLLVCDLKGNLKSNIDILASEGVPSRNI 190
            SL   LKP+  F++ +     Q    I R+P++L    +  L S ++ L+  G+    I
Sbjct: 262 ISLTDNLKPTMAFLETLGIDKNQWAKIISRFPAILTYS-RQKLTSTVEFLSQTGLTEEQI 321

Query: 191 ARMIVWKPRTITRKV-DRMINAVKRVKELGIEPKA----CMFVYAVIVRLSMSDSTWKKK 250
            R++   P  ++  V D++   ++  + L ++       C   + + +  ++   T   +
Sbjct: 322 GRILTRCPNIMSYSVEDKLRPTMEYFRSLNVDVAVLLHRCPQTFGLSIESNLKPVT---E 381

Query: 251 ITVMKSLGWSEKEIFTAFKKDPTYLHCSEEKMRDVADFCFNTAKLDPGTVISYPMFFKLS 310
             + K  G  E  I  + +    Y    +E +    D+ F T       ++ +P FF  S
Sbjct: 382 FFLEKGFGLDEIGIMIS-RYGALYTFSLKENVMPKWDY-FQTMDYPKSELVKFPQFFGYS 441

Query: 311 VDKRLRLRYKVLEVLKVKNLLKNEKITLTG 336
           + +R++ RY++++   V+ LL N+ ++L+G
Sbjct: 442 LQERIKPRYELVQRSGVR-LLLNQVLSLSG 464

[Close]

BLAST of Cmc10g0270571 vs. ExPASy Swiss-Prot
Match: Q9FM80 (Transcription termination factor MTERF9, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF9 PE=2 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 6.7e-10
Identity = 53/261 (20.31%), Postives = 121/261 (46.36%), Query Frame = 0


Query: 68  VIDFLKSHGFENTQIANLVSRRPSILQSKVSTNLKPRFEFLQEIGLVGPLLPKFILSTPW 127
           ++D+L + G + +    +  R    LQ  V  + + R ++L  +G+    + + +L  P 
Sbjct: 187 LLDYLSTFGLKESHFVQMYERHMPSLQINV-FSAQERLDYLLSVGVKHRDIKRMLLRQPQ 246

Query: 128 VLGSSLDSRLKPSFFFIKEILESDEQVTAAICRYPSLLVCDLKGNLKSNIDILASE-GVP 187
           +L  ++++ LK    F+  +   + ++   +   PSL    ++ +L+  I  L  E G+ 
Sbjct: 247 ILQYTVENNLKAHISFLMGLGIPNSKIGQIVAATPSLFSYSVENSLRPTIRYLIEEVGIK 306

Query: 188 SRNIARMIVWKPRTITRKVDRMINA--VKRVKELGIEPKACMFV---YAVIVRLSMSDST 247
             ++ +++   P+ + +++D   N   +   KELG    + + +   +  ++  S+ D  
Sbjct: 307 ETDVGKVVQLSPQILVQRLDITWNTRYMFLSKELGAPRDSVVKMVKKHPQLLHYSIDDG- 366

Query: 248 WKKKITVMKSLGWSEKEIFTAFKKDPTYLHCS-EEKMRDVADFCFNTAKLDPGTVISYPM 307
           +  +I  ++S+G    +I          L  S E+ ++    +  N    +   +  YPM
Sbjct: 367 FLPRINFLRSIGMCNSDILKVLTSLTQVLSLSLEDNLKPKYMYLVNELNNEVHILTKYPM 426

Query: 308 FFKLSVDKRLRLRYKVLEVLK 322
           +  LS+D+R+R R++ L  LK
Sbjct: 427 YLSLSLDQRIRPRHRFLVELK 445

[Close]

BLAST of Cmc10g0270571 vs. ExPASy Swiss-Prot
Match: Q6AUK6 (Transcription termination factor MTERF4, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0404000 PE=2 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 9.7e-09
Identity = 50/249 (20.08%), Postives = 103/249 (41.37%), Query Frame = 0


Query: 69  IDFLKSHGFENTQIANLVSRRPSILQSKVSTNLKPRFEFLQEIGLVGPLLPKFILSTPWV 128
           I +L   G    Q+ ++++R P +L  +V   +KP  E L+ IGL    + + I   P+V
Sbjct: 220 IAYLVGIGVARRQVGSVITRFPEVLGMRVGKIIKPFVEHLEGIGLQRLAIARIIEKKPYV 279

Query: 129 LGSSLDSRLKPSFFFIKEILESDEQVTAAICRYPSLLVCDLKGNLKSNIDILASEGVPSR 188
           LG  L+ ++KP+   + E     E +   + +YP +L  +L+  L +   +  S      
Sbjct: 280 LGFGLEDKVKPNIEALLEFGVRKEALAFIVAQYPDILGIELRDKLATQQSLFESS----- 339

Query: 189 NIARMIVWKPRTITRKVDRMINAVKRVKELGIEPKACMFVYAVIVRLSMSDSTWKKKITV 248
                I+       R ++RM  A+                       S+  +   K +  
Sbjct: 340 -----ILVSSEDFGRVIERMPQAI-----------------------SLGRTAVLKHVNF 399

Query: 249 MKSLGWSEKEIFTAFKKDPTYLHCSEEKMRDVADFCFNTAKLDPGTVISYPMFFKLSVDK 308
           + S G+   ++       P  L  + + M+   ++  N  + D   ++ +P FF   ++ 
Sbjct: 400 LTSCGFLLSQVSKMVVACPQLLALNMDIMKMSFEYFQNEMERDLEELVEFPAFFTYGLES 435

Query: 309 RLRLRYKVL 318
            +R R++++
Sbjct: 460 TVRPRHEMV 435

[Close]

BLAST of Cmc10g0270571 vs. ExPASy Swiss-Prot
Match: B6TGN4 (Transcription termination factor MTERF4, chloroplastic OS=Zea mays OX=4577 GN=MTERF4 PE=2 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 1.3e-08
Identity = 50/249 (20.08%), Postives = 105/249 (42.17%), Query Frame = 0


Query: 69  IDFLKSHGFENTQIANLVSRRPSILQSKVSTNLKPRFEFLQEIGLVGPLLPKFILSTPWV 128
           + +L   G    Q+ ++++R P +L  +V   +KP  E L+ IGL    + + I   P+V
Sbjct: 211 VAYLVGIGVGRRQVGSVITRFPEVLGMRVGKIIKPFVEHLEGIGLQRLAIARIIEKKPYV 270

Query: 129 LGSSLDSRLKPSFFFIKEILESDEQVTAAICRYPSLLVCDLKGNLKSNIDILASEGVPSR 188
           LG  L  ++KP+   + +I    E + + + +YP +L  +L+  L +   +  S  + SR
Sbjct: 271 LGFGLQEKVKPNIEALVDIGVRKEALASIVMQYPDVLGLELRDKLVAQQSLFESSILVSR 330

Query: 189 NIARMIVWKPRTITRKVDRMINAVKRVKELGIEPKACMFVYAVIVRLSMSDSTWKKKITV 248
                         R ++RM  A+                       S+  +   K +  
Sbjct: 331 ----------EDFGRVLERMPQAI-----------------------SLGRAAVLKHVNF 390

Query: 249 MKSLGWSEKEIFTAFKKDPTYLHCSEEKMRDVADFCFNTAKLDPGTVISYPMFFKLSVDK 308
           + + G+   ++       P  L  + + MR   ++  N  + D   ++ +P FF   ++ 
Sbjct: 391 LTACGFMLSQVSKMVVACPQLLALNIDIMRMNFEYFKNEMERDLEELVEFPAFFTYGIES 426

Query: 309 RLRLRYKVL 318
            +R R++++
Sbjct: 451 TVRPRHEMV 426

[Close]

BLAST of Cmc10g0270571 vs. ExPASy Swiss-Prot
Match: F4IHL3 (Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF2 PE=3 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 3.8e-05
Identity = 27/131 (20.61%), Postives = 63/131 (48.09%), Query Frame = 0


Query: 69  IDFLKSHGFENTQIANLVSRRPSILQSKVSTNLKPRFEFLQEIGLVGPLLPKFILSTPWV 128
           I++LK  G    ++  L++ +P ++   +    KP  ++   +G+    + + ++  P +
Sbjct: 356 INYLKEFGLSTEEVGRLLAYKPHLMGCSIEERWKPLVKYFYYLGIPKEGMKRILVVKPIL 415

Query: 129 LGSSLDSRLKPSFFFIKEILESDEQVTAAICRYPSLLVCDLKGNLKS-NIDILASEGVPS 188
               L+  + P   F++E+   +E +   + ++PSLL   L   ++   I +L   GV  
Sbjct: 416 YCIDLEKTIAPKVRFLQEMGIPNEAIGNMLVKFPSLLTNSLYKKIRPVVIFLLTRAGVTQ 475

Query: 189 RNIARMIVWKP 199
           ++I ++I   P
Sbjct: 476 KDIGKVIAMDP 486

[Close]

BLAST of Cmc10g0270571 vs. ExPASy TrEMBL
Match: A0A5A7SY07 (Transcription termination factor MTERF8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G002660 PE=3 SV=1)

HSP 1 Score: 737.3 bits (1902), Expect = 3.3e-209
Identity = 375/375 (100.00%), Postives = 375/375 (100.00%), Query Frame = 0


Query: 1   MFKFSSTFLLHFIQKRFFNTVSTSTLPLASISTVEFLTNSCGLSSGSPTSAGRKLQFDEK 60
           MFKFSSTFLLHFIQKRFFNTVSTSTLPLASISTVEFLTNSCGLSSGSPTSAGRKLQFDEK
Sbjct: 1   MFKFSSTFLLHFIQKRFFNTVSTSTLPLASISTVEFLTNSCGLSSGSPTSAGRKLQFDEK 60

Query: 61  NTQQYGAVIDFLKSHGFENTQIANLVSRRPSILQSKVSTNLKPRFEFLQEIGLVGPLLPK 120
           NTQQYGAVIDFLKSHGFENTQIANLVSRRPSILQSKVSTNLKPRFEFLQEIGLVGPLLPK
Sbjct: 61  NTQQYGAVIDFLKSHGFENTQIANLVSRRPSILQSKVSTNLKPRFEFLQEIGLVGPLLPK 120

Query: 121 FILSTPWVLGSSLDSRLKPSFFFIKEILESDEQVTAAICRYPSLLVCDLKGNLKSNIDIL 180
           FILSTPWVLGSSLDSRLKPSFFFIKEILESDEQVTAAICRYPSLLVCDLKGNLKSNIDIL
Sbjct: 121 FILSTPWVLGSSLDSRLKPSFFFIKEILESDEQVTAAICRYPSLLVCDLKGNLKSNIDIL 180

Query: 181 ASEGVPSRNIARMIVWKPRTITRKVDRMINAVKRVKELGIEPKACMFVYAVIVRLSMSDS 240
           ASEGVPSRNIARMIVWKPRTITRKVDRMINAVKRVKELGIEPKACMFVYAVIVRLSMSDS
Sbjct: 181 ASEGVPSRNIARMIVWKPRTITRKVDRMINAVKRVKELGIEPKACMFVYAVIVRLSMSDS 240

Query: 241 TWKKKITVMKSLGWSEKEIFTAFKKDPTYLHCSEEKMRDVADFCFNTAKLDPGTVISYPM 300
           TWKKKITVMKSLGWSEKEIFTAFKKDPTYLHCSEEKMRDVADFCFNTAKLDPGTVISYPM
Sbjct: 241 TWKKKITVMKSLGWSEKEIFTAFKKDPTYLHCSEEKMRDVADFCFNTAKLDPGTVISYPM 300

Query: 301 FFKLSVDKRLRLRYKVLEVLKVKNLLKNEKITLTGWFMQGEREFVKNNVVKHLDEIPNLM 360
           FFKLSVDKRLRLRYKVLEVLKVKNLLKNEKITLTGWFMQGEREFVKNNVVKHLDEIPNLM
Sbjct: 301 FFKLSVDKRLRLRYKVLEVLKVKNLLKNEKITLTGWFMQGEREFVKNNVVKHLDEIPNLM 360

Query: 361 DIYRGNDASETKSVS 376
           DIYRGNDASETKSVS
Sbjct: 361 DIYRGNDASETKSVS 375

[Close]

BLAST of Cmc10g0270571 vs. ExPASy TrEMBL
Match: A0A5A7SYC3 (Transcription termination factor MTERF8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G003050 PE=3 SV=1)

HSP 1 Score: 672.9 bits (1735), Expect = 7.6e-190
Identity = 343/375 (91.47%), Postives = 353/375 (94.13%), Query Frame = 0


Query: 1   MFKFSSTFLLHFIQKRFFNTVSTSTLPLASISTVEFLTNSCGLSSGSPTSAGRKLQFDEK 60
           M K SS+FLLHF Q R  NTVSTSTLPL S+ST++FLTNSCGLSSGSPTSAGRKLQFDEK
Sbjct: 1   MSKISSSFLLHFFQNRSLNTVSTSTLPLPSVSTIQFLTNSCGLSSGSPTSAGRKLQFDEK 60

Query: 61  NTQQYGAVIDFLKSHGFENTQIANLVSRRPSILQSKVSTNLKPRFEFLQEIGLVGPLLPK 120
           NTQQYGAVIDFLKSHGFENTQIANLVSRRPSILQSKVS NLKPRFEFLQEIGLVGPLLPK
Sbjct: 61  NTQQYGAVIDFLKSHGFENTQIANLVSRRPSILQSKVSKNLKPRFEFLQEIGLVGPLLPK 120

Query: 121 FILSTPWVLGSSLDSRLKPSFFFIKEILESDEQVTAAICRYPSLLVCDLKGNLKSNIDIL 180
           FILSTPWVLGSSLDS+LKPSFFFIKEILESDEQVTAAICRYPSLLVCDLKGNLKSNIDIL
Sbjct: 121 FILSTPWVLGSSLDSQLKPSFFFIKEILESDEQVTAAICRYPSLLVCDLKGNLKSNIDIL 180

Query: 181 ASEGVPSRNIARMIVWKPRTITRKVDRMINAVKRVKELGIEPKACMFVYAVIVRLSMSDS 240
           ASEGVPSRNIARMI WKPRTITRKVD MINAVK VKELGIEPKA MF YAV VRLSMSDS
Sbjct: 181 ASEGVPSRNIARMIAWKPRTITRKVDIMINAVKAVKELGIEPKARMFAYAVFVRLSMSDS 240

Query: 241 TWKKKITVMKSLGWSEKEIFTAFKKDPTYLHCSEEKMRDVADFCFNTAKLDPGTVISYPM 300
           TWKKK+TVMKSLGWSEKEIFTAFKKDP YL CSE+KMRDVADFCFNTAKLDPGTVISYP+
Sbjct: 241 TWKKKVTVMKSLGWSEKEIFTAFKKDPNYLGCSEKKMRDVADFCFNTAKLDPGTVISYPV 300

Query: 301 FFKLSVDKRLRLRYKVLEVLKVKNLLKNEKITLTGWFMQGEREFVKNNVVKHLDEIPNLM 360
           FFK SVDKRLR RYKVLEVLKVKNLLKN+KI L  WF QGEREFV+NNVVKHLDEIPNLM
Sbjct: 301 FFKYSVDKRLRPRYKVLEVLKVKNLLKNKKIALAWWFTQGEREFVQNNVVKHLDEIPNLM 360

Query: 361 DIYRGNDASETKSVS 376
           DIYRGNDASETKSVS
Sbjct: 361 DIYRGNDASETKSVS 375

[Close]

BLAST of Cmc10g0270571 vs. ExPASy TrEMBL
Match: A0A5D3CV65 (Transcription termination factor MTERF8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G003110 PE=3 SV=1)

HSP 1 Score: 598.6 bits (1542), Expect = 1.8e-167
Identity = 306/374 (81.82%), Postives = 337/374 (90.11%), Query Frame = 0


Query: 1   MFKFSSTFLLHFIQKRFFNTVSTSTLPLASISTVEFLTNSCGLSSGSPTSAGRKLQFDEK 60
           M + SS+FLLHFIQ RF NT+STSTLPL S+ST++FLTNSCGLSSGSPTSAGRKLQFDEK
Sbjct: 1   MSRLSSSFLLHFIQNRFLNTISTSTLPLPSVSTIQFLTNSCGLSSGSPTSAGRKLQFDEK 60

Query: 61  NTQQYGAVIDFLKSHGFENTQIANLVSRRPSILQSKVSTNLKPRFEFLQEIGLVGPLLPK 120
           NTQQYGAVIDFLKSHGFEN+QIANLVSRRPSILQSKVSTNLKPRFEFLQEIGLVG LL K
Sbjct: 61  NTQQYGAVIDFLKSHGFENSQIANLVSRRPSILQSKVSTNLKPRFEFLQEIGLVGTLLLK 120

Query: 121 FILSTPWVLGSSLDSRLKPSFFFIKEILESDEQVTAAICRYPSLLVCDLKGNLKSNIDIL 180
            ILSTPWVLGSSLDS+LKPSF F+KEILESDEQVTAAICRYPSLL+CDLK NLK  +D+L
Sbjct: 121 CILSTPWVLGSSLDSQLKPSFIFLKEILESDEQVTAAICRYPSLLICDLKVNLKPQLDVL 180

Query: 181 ASEGVPSRNIARMIVWKPRTITRKVDRMINAVKRVKELGIEPKACMFVYAVIVRLSMSDS 240
           ASEGVPSRNIA+MI   PR+I +KVDRM  AVK VKELGIEPKA MFVYAV++RLSMSDS
Sbjct: 181 ASEGVPSRNIAKMIEMNPRSIMQKVDRMTLAVKTVKELGIEPKARMFVYAVLIRLSMSDS 240

Query: 241 TWKKKITVMKSLGWSEKEIFTAFKKDPTYLHCSEEKMRDVADFCFNTAKLDPGTVISYPM 300
           TWKKKI VMKSLGWSEKEIF AFK+ P YL CSE+K+RDVADFCFNTAKLDPGT++SYP 
Sbjct: 241 TWKKKINVMKSLGWSEKEIFIAFKRHPNYLGCSEKKIRDVADFCFNTAKLDPGTLVSYPK 300

Query: 301 FFKLSVDKRLRLRYKVLEVLKVKNLLKNEKITLTGWFMQGEREFVKNNVVKHLDEIPNLM 360
            F+LS++KRL LRYKVLEVLKVKNLLKN+KI   G F+QGE+ FV+  VVKHLDEIPNLM
Sbjct: 301 LFRLSLEKRLPLRYKVLEVLKVKNLLKNKKI--AGLFLQGEKTFVEKYVVKHLDEIPNLM 360

Query: 361 DIYRGNDASETKSV 375
           DIYRGN  ++TKSV
Sbjct: 361 DIYRGNVEAKTKSV 372

[Close]

BLAST of Cmc10g0270571 vs. ExPASy TrEMBL
Match: A0A1S3BDU9 (transcription termination factor MTERF8, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103488808 PE=3 SV=1)

HSP 1 Score: 598.6 bits (1542), Expect = 1.8e-167
Identity = 306/374 (81.82%), Postives = 337/374 (90.11%), Query Frame = 0


Query: 1   MFKFSSTFLLHFIQKRFFNTVSTSTLPLASISTVEFLTNSCGLSSGSPTSAGRKLQFDEK 60
           M + SS+FLLHFIQ RF NT+STSTLPL S+ST++FLTNSCGLSSGSPTSAGRKLQFDEK
Sbjct: 1   MSRLSSSFLLHFIQNRFLNTISTSTLPLPSVSTIQFLTNSCGLSSGSPTSAGRKLQFDEK 60

Query: 61  NTQQYGAVIDFLKSHGFENTQIANLVSRRPSILQSKVSTNLKPRFEFLQEIGLVGPLLPK 120
           NTQQYGAVIDFLKSHGFEN+QIANLVSRRPSILQSKVSTNLKPRFEFLQEIGLVG LL K
Sbjct: 61  NTQQYGAVIDFLKSHGFENSQIANLVSRRPSILQSKVSTNLKPRFEFLQEIGLVGTLLLK 120

Query: 121 FILSTPWVLGSSLDSRLKPSFFFIKEILESDEQVTAAICRYPSLLVCDLKGNLKSNIDIL 180
            ILSTPWVLGSSLDS+LKPSF F+KEILESDEQVTAAICRYPSLL+CDLK NLK  +D+L
Sbjct: 121 CILSTPWVLGSSLDSQLKPSFIFLKEILESDEQVTAAICRYPSLLICDLKVNLKPQLDVL 180

Query: 181 ASEGVPSRNIARMIVWKPRTITRKVDRMINAVKRVKELGIEPKACMFVYAVIVRLSMSDS 240
           ASEGVPSRNIA+MI   PR+I +KVDRM  AVK VKELGIEPKA MFVYAV++RLSMSDS
Sbjct: 181 ASEGVPSRNIAKMIEMNPRSIMQKVDRMTLAVKTVKELGIEPKARMFVYAVLIRLSMSDS 240

Query: 241 TWKKKITVMKSLGWSEKEIFTAFKKDPTYLHCSEEKMRDVADFCFNTAKLDPGTVISYPM 300
           TWKKKI VMKSLGWSEKEIF AFK+ P YL CSE+K+RDVADFCFNTAKLDPGT++SYP 
Sbjct: 241 TWKKKINVMKSLGWSEKEIFIAFKRHPNYLGCSEKKIRDVADFCFNTAKLDPGTLVSYPK 300

Query: 301 FFKLSVDKRLRLRYKVLEVLKVKNLLKNEKITLTGWFMQGEREFVKNNVVKHLDEIPNLM 360
            F+LS++KRL LRYKVLEVLKVKNLLKN+KI   G F+QGE+ FV+  VVKHLDEIPNLM
Sbjct: 301 LFRLSLEKRLPLRYKVLEVLKVKNLLKNKKI--AGLFLQGEKTFVEKYVVKHLDEIPNLM 360

Query: 361 DIYRGNDASETKSV 375
           DIYRGN  ++TKSV
Sbjct: 361 DIYRGNVEAKTKSV 372

[Close]

BLAST of Cmc10g0270571 vs. ExPASy TrEMBL
Match: A0A5D3CV46 (Transcription termination factor MTERF5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G002910 PE=3 SV=1)

HSP 1 Score: 582.0 bits (1499), Expect = 1.8e-162
Identity = 296/375 (78.93%), Postives = 327/375 (87.20%), Query Frame = 0


Query: 1   MFKFSSTFLLHFIQKRFFNTVSTSTLPLASISTVEFLTNSCGLSSGSPTSAGRKLQFDEK 60
           M K SS+FLLHF   RF NT+ TSTLPLAS+ST++FLTNSCGLSSGSPTSAGRKLQF EK
Sbjct: 1   MSKISSSFLLHFFHNRFLNTIPTSTLPLASVSTIQFLTNSCGLSSGSPTSAGRKLQFGEK 60

Query: 61  NTQQYGAVIDFLKSHGFENTQIANLVSRRPSILQSKVSTNLKPRFEFLQEIGLVGPLLPK 120
           NTQQYGAVIDFLKSHGFEN+QIA LVSR+PSILQS+VS NLKP+FEFLQEIG VGPLLPK
Sbjct: 61  NTQQYGAVIDFLKSHGFENSQIAKLVSRQPSILQSRVSANLKPKFEFLQEIGFVGPLLPK 120

Query: 121 FILSTPWVLGSSLDSRLKPSFFFIKEILESDEQVTAAICRYPSLLVCDLKGNLKSNIDIL 180
            I+S+P +L  SLDS+LKPSF  +KE+L SDE+VTAAICR   LL  D KG +KSN D+L
Sbjct: 121 LIVSSPSILNKSLDSKLKPSFRLLKEMLGSDERVTAAICRASWLLTYDFKGVIKSNFDVL 180

Query: 181 ASEGVPSRNIARMIVWKPRTITRKVDRMINAVKRVKELGIEPKACMFVYAVIVRLSMSDS 240
            SEGVPSRNIA+MI W PRTI ++VD+MI  VK VKELGIEPKA MF  AV+VRL MSDS
Sbjct: 181 VSEGVPSRNIAKMIAWNPRTIMQRVDKMIQVVKNVKELGIEPKAGMFFQAVLVRLQMSDS 240

Query: 241 TWKKKITVMKSLGWSEKEIFTAFKKDPTYLHCSEEKMRDVADFCFNTAKLDPGTVISYPM 300
           TWKKKI VMKSLGWSEKEI TAFK+ P  L CSEEKMRDVADFCFNTAKLDPGT+IS P+
Sbjct: 241 TWKKKINVMKSLGWSEKEILTAFKRYPLCLTCSEEKMRDVADFCFNTAKLDPGTLISNPV 300

Query: 301 FFKLSVDKRLRLRYKVLEVLKVKNLLKNEKITLTGWFMQGEREFVKNNVVKHLDEIPNLM 360
           FFKLSV+KRLR RYKVLEVLKVKNLL+N+KI L  WFMQGEREFV+NNVVKHLDEIPNLM
Sbjct: 301 FFKLSVNKRLRPRYKVLEVLKVKNLLRNKKIALAWWFMQGEREFVENNVVKHLDEIPNLM 360

Query: 361 DIYRGNDASETKSVS 376
           DIYRGNDASET+SVS
Sbjct: 361 DIYRGNDASETQSVS 375

[Close]

BLAST of Cmc10g0270571 vs. TAIR 10
Match: AT5G07900.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 185.7 bits (470), Expect = 7.0e-47
Identity = 112/334 (33.53%), Postives = 181/334 (54.19%), Query Frame = 0


Query: 33  TVEFLTNSCGLSSGSPTSAGRKLQFDEKNTQQYGAVIDFLKSHGFENTQIANLVSRRPSI 92
           T+ +L +SCGLS  S T A RKL  D  + ++   V++ L+ HGF   QI++LV +RP +
Sbjct: 71  TLNYLIDSCGLSPDSATVASRKLLLD--SPERPNTVLNLLRDHGFTTAQISSLVKKRPVL 130

Query: 93  LQSKVSTNLKPRFEFLQEIGLVGPLLPKFILSTPWVLGSSLDSRLKPSFFFIKEILESDE 152
           L +   + L P+  F   IG+   LL + + S P +L  SL ++L PS+ F+K +L+SDE
Sbjct: 131 LLANAESVLLPKLSFFLSIGVSKSLLARTLASDPTILTRSLVNQLIPSYNFLKSVLDSDE 190

Query: 153 QVTAAICRYPSLLVCDLKGNLKSNIDILASEGVPSRNIARMIVWKPRTITRKVDRMINAV 212
           ++ AA+ R   + + D   NL  NI+ +A  GVP + I  ++   P  + +K        
Sbjct: 191 KIVAALRRTTWVFLEDHTKNLVPNINYMAETGVPEKCIKLLLTHFPEAVMQKNHEFQAIA 250

Query: 213 KRVKELGIEPKACMFVYAVIVRLSMSD-STWKKKITVMKSLGWSEKEIFTAFKKDPTYLH 272
           K+ +E+G  P+   FV A+       + S W K   V +  GWSE +I  AFKK P  + 
Sbjct: 251 KQAQEMGFNPQKSTFVLAIHALSGKGNKSIWDKCFEVYQRWGWSEDDIMCAFKKHPHCMM 310

Query: 273 CSEEKMRDVADFCFNTAKLDPGTVISYPMFFKLSVDKRLRLRYKVLEVLKVKNLLKNEKI 332
            SE K+    ++  N   + P ++   P+    S++KR+  R  V +VL V N L  E  
Sbjct: 311 LSERKINRTMEYFVNEMNMAPRSIAQCPVVLFFSLEKRIIPRCSVTKVL-VSNGLVKEDW 370

Query: 333 TLTGWFMQGEREFVKNNVVKHLDEIPNLMDIYRG 366
           +LT   +  E+ F++  V+K+ +E+P LM++Y G
Sbjct: 371 SLTSLLVPVEKVFLEKLVIKYEEELPELMNLYLG 401

[Close]

BLAST of Cmc10g0270571 vs. TAIR 10
Match: AT1G21150.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 144.8 bits (364), Expect = 1.4e-34
Identity = 93/340 (27.35%), Postives = 160/340 (47.06%), Query Frame = 0


Query: 27  PLASISTVEFLTNSCGLSSGSPTSAGRKLQFDEKNTQQYGAVIDFLKSHGFENTQIANLV 86
           P     TV +L +SCGLS  S  S  R ++    ++++  +V+   K HGF N QI +++
Sbjct: 52  PCLESFTVSYLVDSCGLSLESAKSNSRFVKL--VSSKKPDSVLALFKDHGFTNDQITSVI 111

Query: 87  SRRPSILQSKVSTNLKPRFEFLQEIGLVGPLLPKFILSTPWVLGSSLDSRLKPSFFFIKE 146
              P +L       + P+  F   IG       K I S+P +L  SL  RL P +  +K 
Sbjct: 112 KSFPRVLSLSPEDVISPKLMFFSSIGFSTSDTAKMISSSPKMLSYSLHKRLIPCYDSLKS 171

Query: 147 ILESDEQVTAAICRYPSLLVCDLKGNLKSNIDILASEGVPSRNIARMIVWKPRTITRKVD 206
           IL  +E V   + R        +   +   + I    GVP ++I  ++   P T   +  
Sbjct: 172 ILVEEESVVKCLKRGIRCFSLKITHCVSLRVSICRELGVPDKSIKWLVQASPFTFFSRER 231

Query: 207 RMINAVKRVKELGIEPKACMFVYAVIVRLSMSDSTWKKKITVMKSLGWSEKEIFTAFKKD 266
           R    + RV   G +PK   FV+A++     S+S  ++K  + +  GWS+++   A  + 
Sbjct: 232 RFNEVLNRVCSYGFDPKKAGFVHAMVAFDCTSESAMERKFKLFQCFGWSKEDFVAAIMRF 291

Query: 267 PTYLHCSEEKMRDVADFCFNTAKLDPGTVISYPMFFKLSVDKRLRLRYKVLEVLKVKNLL 326
           P  +  S+EK+    ++  N   L    +++ P+   LS++KR++ R +V+ +L  K L+
Sbjct: 292 PNCVTVSDEKIMYTLEYLVNNIGLQARDIVARPVVLSLSMEKRIKPRNQVISLLLSKGLV 351

Query: 327 KNEKITLTGWFMQGEREFVKNNVVKHLDEIPNLMDIYRGN 367
           K E I           EF+   V+K+ DE+P L+  +  N
Sbjct: 352 KKEDINYFTILKLKSSEFMDKFVLKYQDEMPQLVQPFTSN 389

[Close]

BLAST of Cmc10g0270571 vs. TAIR 10
Match: AT1G61970.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 132.5 bits (332), Expect = 7.1e-31
Identity = 96/371 (25.88%), Postives = 176/371 (47.44%), Query Frame = 0


Query: 33  TVEFLTNSCGLSSGSPTSAGRKLQFDEKNTQQYGAVIDFLKSHGFENTQIANLVSRRPSI 92
           TV +L +S GL++    S  RK+ F++KN     +V++ L SHGF  +QI+ ++   P +
Sbjct: 54  TVSYLVDSLGLTTKLAESISRKVSFEDKNNPD--SVLNLLTSHGFTGSQISTIIRDYPQL 113

Query: 93  LQSKVSTNLKPRFEFLQEIGLVGPLLPKFILSTPWVLGSSLDSRLKPSFFFIKEILESDE 152
           L +    +L P+ +FLQ  G     + + + S P +LG      +   + FIK+ L    
Sbjct: 114 LIADAEKSLGPKLQFLQSRGASSSEITEIVSSVPEILGKKGHKTISVYYDFIKDTLLEKS 173

Query: 153 QVTAAICRYPSLLVCDLKGNLKSNIDILASEGVPSRNIARMIVWKPRTITRKVDRMINAV 212
                +C   SL   +L+  ++ N+ +L   G+P + +  +++   + +  K ++    +
Sbjct: 174 SKNEKLCH--SLPQGNLENKIR-NVSVLRELGMPHKLLFSLLISDSQPVCGK-EKFEETL 233

Query: 213 KRVKELGIEPKACMFVYAVIVRLSMSDSTWKKKITVMKSLGWSEKEIFTAFKKDPTYLHC 272
           K+V E+G +P    FV A+ V   M++ T ++K+ + KSLG+   +++++FKK P  L  
Sbjct: 234 KKVVEMGFDPTTSKFVEALQVIYKMNEKTIEEKVHLYKSLGFDVGDVWSSFKKWPISLRV 293

Query: 273 SEEKMRD-----------------------------------VADFCFNTAKLDPGTVIS 332
           SE+KM D                                     +F           V+S
Sbjct: 294 SEKKMLDSIETFLGLGFSRDEFAKMVKHFPPCIGLSTETVKKKTEFLVKKMNWPLKAVVS 353

Query: 333 YPMFFKLSVDKRLRLRYKVLEVLKVKNLLKNEKITLTGWFMQGEREFVKNNVVKHLDE-- 367
            P  F  S++KR+  R  V++ L  K L++NE  +++   M  ++ F+   V  H+D+  
Sbjct: 354 NPAVFGYSLEKRIVPRGNVIKALMSKGLMRNELPSISCVLMCTKQVFLNRYVANHVDKQL 413

[Close]

BLAST of Cmc10g0270571 vs. TAIR 10
Match: AT1G61970.2 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 132.5 bits (332), Expect = 7.1e-31
Identity = 96/371 (25.88%), Postives = 176/371 (47.44%), Query Frame = 0


Query: 33  TVEFLTNSCGLSSGSPTSAGRKLQFDEKNTQQYGAVIDFLKSHGFENTQIANLVSRRPSI 92
           TV +L +S GL++    S  RK+ F++KN     +V++ L SHGF  +QI+ ++   P +
Sbjct: 54  TVSYLVDSLGLTTKLAESISRKVSFEDKNNPD--SVLNLLTSHGFTGSQISTIIRDYPQL 113

Query: 93  LQSKVSTNLKPRFEFLQEIGLVGPLLPKFILSTPWVLGSSLDSRLKPSFFFIKEILESDE 152
           L +    +L P+ +FLQ  G     + + + S P +LG      +   + FIK+ L    
Sbjct: 114 LIADAEKSLGPKLQFLQSRGASSSEITEIVSSVPEILGKKGHKTISVYYDFIKDTLLEKS 173

Query: 153 QVTAAICRYPSLLVCDLKGNLKSNIDILASEGVPSRNIARMIVWKPRTITRKVDRMINAV 212
                +C   SL   +L+  ++ N+ +L   G+P + +  +++   + +  K ++    +
Sbjct: 174 SKNEKLCH--SLPQGNLENKIR-NVSVLRELGMPHKLLFSLLISDSQPVCGK-EKFEETL 233

Query: 213 KRVKELGIEPKACMFVYAVIVRLSMSDSTWKKKITVMKSLGWSEKEIFTAFKKDPTYLHC 272
           K+V E+G +P    FV A+ V   M++ T ++K+ + KSLG+   +++++FKK P  L  
Sbjct: 234 KKVVEMGFDPTTSKFVEALQVIYKMNEKTIEEKVHLYKSLGFDVGDVWSSFKKWPISLRV 293

Query: 273 SEEKMRD-----------------------------------VADFCFNTAKLDPGTVIS 332
           SE+KM D                                     +F           V+S
Sbjct: 294 SEKKMLDSIETFLGLGFSRDEFAKMVKHFPPCIGLSTETVKKKTEFLVKKMNWPLKAVVS 353

Query: 333 YPMFFKLSVDKRLRLRYKVLEVLKVKNLLKNEKITLTGWFMQGEREFVKNNVVKHLDE-- 367
            P  F  S++KR+  R  V++ L  K L++NE  +++   M  ++ F+   V  H+D+  
Sbjct: 354 NPAVFGYSLEKRIVPRGNVIKALMSKGLMRNELPSISCVLMCTKQVFLNRYVANHVDKQL 413

[Close]

BLAST of Cmc10g0270571 vs. TAIR 10
Match: AT5G64950.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 125.2 bits (313), Expect = 1.1e-28
Identity = 90/303 (29.70%), Postives = 149/303 (49.17%), Query Frame = 0


Query: 60  KNTQQYGAVIDFLKSHGFENTQIANLVSRRPSILQSKVSTNLKPRFEFLQEIGLVGPLLP 119
           K+ +Q  +VI  LKS+ F +TQI   +   P ++   V   L+P+  F ++IG  G  L 
Sbjct: 66  KSLEQPRSVIQMLKSYSFSDTQIQKSIRVHPRMMFYNVEKILEPKLRFFKDIGFTGSGLG 125

Query: 120 KFILSTPWVLGSSLDSRLKPSFFFIKEIL---ESDEQVTAAICRYPSLLVCDLKGNLKSN 179
           KF+     V+G SL  +L P+   +K I+     D  V  + C +  LL  D    L  N
Sbjct: 126 KFVSQNSSVVGVSLVKKLIPTVEILKSIVAPKHEDLPVILSRCGW-LLLSRDPNLFLLPN 185

Query: 180 IDILASEGVPSRNIARMIVWKPRTITRKVDRMINAVKRVKELGIEPKACMFVYAVIVRLS 239
           I  L + G+    +A ++  +PR      +++   V R  +LG    + M V+AVI   S
Sbjct: 186 ISYLETCGIVGSQLASLLRRQPRIFNLSEEKLRGYVSRALDLGFTLNSRMLVHAVISLSS 245

Query: 240 MSDSTWKKKITVMKSLGWSEKEIFTAFKKDPTYLHCSEEKMRDVADFCFNTAKLDPGTVI 299
           +S+ T+ +K+ +  + G+SE EI    ++ P  + CSE+K+    +F      L+   + 
Sbjct: 246 LSEKTFDRKVKLFMANGFSEDEITDIIRRSPGLIRCSEDKLTLGFEFYLKRMGLEREALA 305

Query: 300 SYPMFFKLSVDKRLRLRYKVLEVLKVKNLLKNE---KITLTGWFMQGEREFVKNNVVKHL 357
             P     +++KR+  R KVL++L+ K LL  E   K  + G     E  F++  VV+  
Sbjct: 306 KRPCVLSYNLEKRVIPRLKVLQILREKGLLLKEEKKKKNMVGIVEMTEEAFLEKYVVRFG 365

The following BLAST results are available for this feature:

BLAST of Cmc10g0270571 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0034157.1	6.7e-209	100.00	transcription termination factor MTERF8 [Cucumis melo var. makuwa] >TYK15762.1 t...	[more]
KAA0034119.1	1.6e-189	91.47	transcription termination factor MTERF8 [Cucumis melo var. makuwa] >TYK15801.1 t...	[more]
XP_008445929.1	3.7e-167	81.82	PREDICTED: transcription termination factor MTERF8, chloroplastic-like [Cucumis ...	[more]
TYK15787.1	3.6e-162	78.93	transcription termination factor MTERF5 [Cucumis melo var. makuwa]	[more]
KAA0034132.1	6.2e-162	78.93	transcription termination factor MTERF5 [Cucumis melo var. makuwa]	[more]

BLAST of Cmc10g0270571 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4JVI3	7.9e-11	21.48	Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana O...	[more]
Q9FM80	6.7e-10	20.31	Transcription termination factor MTERF9, chloroplastic OS=Arabidopsis thaliana O...	[more]
Q6AUK6	9.7e-09	20.08	Transcription termination factor MTERF4, chloroplastic OS=Oryza sativa subsp. ja...	[more]
B6TGN4	1.3e-08	20.08	Transcription termination factor MTERF4, chloroplastic OS=Zea mays OX=4577 GN=MT...	[more]
F4IHL3	3.8e-05	20.61	Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana O...	[more]

BLAST of Cmc10g0270571 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SY07	3.3e-209	100.00	Transcription termination factor MTERF8 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A5A7SYC3	7.6e-190	91.47	Transcription termination factor MTERF8 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A5D3CV65	1.8e-167	81.82	Transcription termination factor MTERF8 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A1S3BDU9	1.8e-167	81.82	transcription termination factor MTERF8, chloroplastic-like OS=Cucumis melo OX=3...	[more]
A0A5D3CV46	1.8e-162	78.93	Transcription termination factor MTERF5 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]

BLAST of Cmc10g0270571 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G07900.1	7.0e-47	33.53	Mitochondrial transcription termination factor family protein	[more]
AT1G21150.1	1.4e-34	27.35	Mitochondrial transcription termination factor family protein	[more]
AT1G61970.1	7.1e-31	25.88	Mitochondrial transcription termination factor family protein	[more]
AT1G61970.2	7.1e-31	25.88	Mitochondrial transcription termination factor family protein	[more]
AT5G64950.1	1.1e-28	29.70	Mitochondrial transcription termination factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	SMART	SM00733	mt_12	coord: 83..114 e-value: 3.4E-4 score: 29.9 coord: 155..186 e-value: 0.28 score: 20.3 coord: 292..323 e-value: 8.2 score: 15.4 coord: 260..291 e-value: 730.0 score: 4.9 coord: 191..221 e-value: 530.0 score: 6.0 coord: 119..150 e-value: 0.24 score: 20.5 coord: 225..255 e-value: 420.0 score: 6.8
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PFAM	PF02536	mTERF	coord: 69..222 e-value: 3.4E-23 score: 82.1 coord: 229..323 e-value: 1.1E-12 score: 47.5
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PANTHER	PTHR13068	CGI-12 PROTEIN-RELATED	coord: 6..367
IPR038538	MTERF superfamily, mitochondrial/chloroplastic	GENE3D	1.25.70.10	Transcription termination factor 3, mitochondrial	coord: 132..357 e-value: 5.0E-42 score: 145.9
None	No IPR available	PANTHER	PTHR13068:SF31	TRANSCRIPTION TERMINATION FACTOR MTERF15, MITOCHONDRIAL-LIKE	coord: 6..367

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc10g0270571.1	Cmc10g0270571.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006353	DNA-templated transcription, termination
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003690	double-stranded DNA binding