Cmc10g0268571 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc10g0268571
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	U4/U6 small nuclear ribonucleoprotein Prp31 homolog
Location	CMiso1.1chr10: 3533837 .. 3541476 (+)
RNA-Seq Expression	Cmc10g0268571
Synteny	Cmc10g0268571

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGGGCTGGGCCTTGCAGGCTCAACATCTCAACTCTCCAATCTATCGGCTATCTTGCCTTCGATCGGTGACTGGATCGGCGAAGAAAGACGGGTGTCCATTTCAATTTTTCTCTCTTCCTCTGTTCTTCCCAATTTCCGTCGACCACGAGCCGCTAAACAGCTTTTCCCGCTCTTTCGTGACTTCATCGGCGTTCTTTCTTCTCGTTCTTGCTGTGAAATTTCATCTCGAAATTGGAGAACATAGTTTCATCCGAGGTTAGGGATTTCCATTTTTGTGTTAAAGCAATTGAGTGTGGTTTTATCCTTTTAGGTTTAATGTATACGTATGTTTCCTTACTCTGGAAATTGAAAATTTGATATTCAGCTGTTCTTCAACTTGGCGCCGAATTGTTTACGATCAGGGAGGCTTTATAAATCTTCTGCCGAAGCTTAGGAAATGGTTAGTAACTTTCTTACGTTTAGATTTCGGCACTTTTCTTTTGTATGCTGGTTTAGTTTAGTTGCTACGATCGTGCATGTAAACTCTAGTTGACTTATTTGTTTTTATACTTTCATTAGGCTTTTCGACTTGGTATGAGGCTTCTTGTTTCGAATGCTTGTTGGATATTTTGGAATTGCCATTTATCTTGTTTGTTAATTTCAGTTTCTTTTCTTGGGGTTTGTAGGCTACTTTGGCTGATTCCTTTCTAGCAGATCTTGATGAACTCTCTGATGAAGACAAGTTTCAGGTTTGTAAAGGCTTTTTACTTCTCTCTGTAAATGAAGTAATAATTATGTGGGTTGGTTGTAGTGTGAATCCATCTACCTTATATTTTGAGGCGATAGTTATTGGATGTTTGCAGGGCGAAGCAGGTGCCGATGCCGAAAATATGGAAGAGGATATTGACGGGGACCTTGCCGACCTAGAAAGCCTTAATTATGAGGATCTGGATAGTGTCTCGAAACTGCAGAAAACACAAAGATACAATGATATTATGCAGGTTAGTTCACATGAAAGTTTCCTTATTGACCTTGACGTGGCTTCAACAAAAGGGGGTTAGCCAATGAATACATTTATTCCCTGCTGTTGCATCTAGTATTTTAACCTTTTAGTGAATGATAAGTTTTGGGTTATTGTATAATTATTGGATTTTTTTTTTTTTGCAATTCATCTCCACCGAATAAATTTAGACTTGCAGATTTTGAAAATATATGGACGTTATGATGCATTTTCTATTCTACAATTGAAAACCATGATGTTCCTAAAATCACAACTTCTCTCCTCTAAATGTTTAACTTCTTTAGTTTTAAAAAATGACGCTCACTATACTTCTCCATTTCCCATCTGTGCGGAAGTGATTTTTATTTGATTTGTTGGGATTTGAATTACAGAAAGTTGAAGATGCATTGCAGACGGATTCTAATATCTCAAATCAGGGATTTGTATTGGAAGATGATCCTGAGTACCAATTGATTGTAGAGTGTAATGCCTTGTCAGTGGATATTGAGAATGAAATTATTATTATTCACAACTTTATACGTGATAAATATCGACTGAAATTTCCAGAGCTTGAATCACTTGTGCACCATCCAATTGATTACGCTCGAGTTGTTAAGAAGATTGGGAATGAAGTGGATTTGACTCTTGTAGATTTAGAAGGACTTTTACCTTCTGCTGTTATTATGGTTGTTTCTGTCACAGCATCTACCACAAGTGGAAAGCCACTCCCTGAGGAAATTCTCCAGAAAACAATTGATGCATGTGATCGGGCTCTTGCCTTAGATTCAGCAAAGAAAATGGTTCTTACTTTTGTTGAAAGTAGAATGGGGCATATTGCACCAAATCTTTCAGCCATAGTTGGAAGTGCTGTTGCAGCAAAACTAATGGGAACTGCTGGTGGTCTTGTTGCTTTAGCTAAGATGCCTGCTTGCAATGTTCAGCTTCTTGGTGCAAAGAAAAAAAATCTTGCTGGGTTTTCCACAGCTACCTCACAATTTCGAGTAGGTTATATTGAGCAAACAGAGATATTCCAATCGACACCTCCACCTTTGAAGATGCGTGCTTGTCGACTCATATCTGCAAAGTCAACACTTGCAGCACGAGTTGACTCCACCATGGGAGATCCTACTGGGAAGACTGGCAGAGTCTTCAAAGATGAGATCCTTAAAAAAATTGAGAAATGGCAGGAACCTCCACCTGCAAAACAACCAAAACCTCTTCCGGTCCCTGATTCTGAACCTAAAAAGAAGAGAGGTGGCCGTCGATTAAGGAAGATGAAGGAAAGGTACTGTTATGTCACTTTTTTCTTTCATCTCCCTAACAGTAGAAGCTTTGGTCTGTTGCACTTTTCGTTCATTCATAGATTGAGATTGATATGGTTTCCTTGTCAGATATGCAACAACGGAGATGAGGAAGCTAGCTAACAGGATGCAGTTTGGGGTGCCTGAAGAGAGTTCTTTAGGTAAAGCATTATTTCATTTCTGAATAGTCAATCTGGATTGTTGGGAATCTTTGGATTGTAGTCTTGCTTCTGCTATGTTTCATGTTACTCATTGGAATGAGATTCAATGTTTTGTTGTTCAACTAGCTTGAGTTGCCACGTTGCCAGTCTTCTCGTCTTGCGTCTGTCCTCTTTCAGGAATGTTTAATATATAAAGTAGTTGCATTTTCTTCCGAATATCAGCTATGTTTTGATAATTGTTCTGAATCTGGGGAAAAAGTTGTTTGAAGCATTCTAAATAAAAGTTTCTTCTCTTTTTTATTTTTTTATAGAAGATTCTGAATAAGAATACTCTTAATAAATATTTAACATTTTCCCTCTATACAACAGGAGATGGATTGGGGGAAGGATATGGAATGCTTGGTCAGGCTGGGAGTGGGAAGTTGCGTGTATCAGCTGCTCAGAGCAAGCTTGCTGCAAAAGTTGTTAAGAAGTAAGTCAAGTCATTGAGCTTAGCTGATCCTAATAATAATAATTTCTACAAGGAAGGGGAAAAGGATATTTGTAGCCTACCATTTCGCTTCTTTGTCGGTTTTCTTTTACTTATCTTTTTGAGTTATTTTTAGGTTCAAGGAAAAACGCTATGGAAGCAGTGGTGCTACGTCTGGGCTGACCTCAAGTTTGGCATTTACTCCCGTACAAGTGAGTATTCTCTTTTTTCCTCCTCTTCGCCTCCTATGTTATCTAACTTTACCTCAGAAGTATTTTTTTTTCGTGACACTGCCTGGGTGCTTAATGTCAAGGTTATGAGAATTTCTTGTTTTCCTTGCAGGGAATCGAGCTGTCAAATCCTCAGGCTCATTTGAACCAGCTAGGGAGCGGAACACAAAGCACCTACTTTTCTGAAACAGGAACATTTTCAAAAATTAGGAAAAACTGAGTCATTAGATCATCAAGCTTTATGTTTCGTGTTCGTGCTGTAAGCATACATGAATATGGCTACAGTTACGCTTTGTAATTCAGTACTAAGAGAGCAACAGTAATTTATTTTTCTATAATGCAAAGGTTTTCTTTTTCTGCTCCTAAGTTTTGGTTGATTATGCTTTATTATTTTTTGGCCTTAGTTGACTGATTAGTGATTAGCCTTTTGGCAGGCCTTTATCTTATACTTGGCTGCCGTACACTTTTCCTGGTGGTTTTGTATTTGTTTAGGACTTGAAGTCTGTCTCTTGGTTAGTGCCATTAAATAATCGTTAGTACTTCAGTAAAATCATCCAAACTTATAACCCTTTCCATATTCCCGTGGGGAAGTTTTATTTAGAACATTGATTTTGGGCAAAGCTAAAGTAACAAGATTACTACACTGTAGCCTTCGATTAGTAGTGCACAGCTGCAGGTACATCAAGTATCCATGATACGTGCCCATGCACGTCTCTTTAATGTATTTCTCATTTCATCTAGGACAAGCTGCTTTGATTTCTCTGCAGCCGTCAAATCACATTGATTTGGGTGTATTAAAAAGGAGGTGTGTTCTGTTGCGTCCACGGAAAGATGCTTCTGGATTTATGTAATTTAATATCTCTTAAATATATTTCACCGGGCCAATTTGGTAGTTCCAGATCAATTCAACTTCTTTATAGTTCATATAGTGTTGACTTACAAAATACTCAATCTTGCTGTATTATAAAAACTAATCTTCCATCTGCAGTTTGTAAGCACACGGGAGTAGCCCTTCGGAGCTTGGCATCCCAAAAGAAGATTGTAGGGAGCCAAATTTAAAGCTGTACCAGGTTCTCATAGCCGGAAAATTCTTCCTTTTTGACGGCTCCAATGAAACTCGTCTGTGGAGGTTTGCTTCTCCCTTCTGTCATTGACCAGCATCTTTGTCTTTTTTGAAGTCCAAAACACTGAAACAAAATGGCGTTGCCATCCCCACGTGAGATGTCTCGCATTGTCTTTGGCACATCTTTCTAGATAAGATTAATTTGCCTTGTCTAGATCTGTCTAGTGGGATCCAGTTCGTGCATCTCTGACAGTGAATTTTTTCTTGCCTCATGGACCAAATAAGCCAGCGCCTTTATTTCCCCATATACGGAAAGGGAAAGGGAAAAGGCTTTCTTTTTTCAAATAAAAGAAAAGTGAAAAAAAACAAGAGAGAGGCACAAAGACAAACATCTTCCTTCGCTTTTCATCCATGTCTTACTTTGGAGGTTCCCTAATGATTCCTCTATACCAGATTACAATACCCGTTTTATTCCTAACTTAGAATTTATGATGAAAGAATCTTAACAAGTATAAATAGAAAAAATACATCTATTTGCACTCTGGTGGTAGAACTTTGTATCGAGATGTATCTTTGCAATAGGAGTAGAACATGAGCTTCCTCCTTGCCCAATCCATTGCATCTACTTGCTGCTGCGATAGCTTGATAAATTCTGGACCCTCTACGGTATCTGGGCCCGATACGTTGGCTTTGGAACCTGAAGGAACAGTTGCTGTTGGTGTTAATATACCTCCATTGATTTCCATTTCTTCAAAAGAAGCTGTATATGGTGCATGCTTGTAGTCAACTGGGTATTTTCCTCCATGAGTTGCCCATTCTGAACCATCCCATATTGTGACGAAAACTGACATAGGCTTTAATGGATAGAACACTTCAGAATTTCGCAGCTCTCTGACTGGAACGTTATCCACCAGAAACCTGCTTGCATTTTGAGACACTTTTTAGGAAATTAAGGAAACCCGAAAACCCATGTTTTAAAATAAGGATTCTGCACTTTGGGTTGATTTTAGTGATTGAATTTCATGCACTTACACTGTATGATAGTTGTTCCAAATGATGGTGTAATCATGGTACTTCACGCTGGGATCAAACCAAAGATAGAATTTCTCTTCTCTTCCAGTCTTAACGCTTCCATTGGCATAAATATTTGTTTGAATAACCCAATCTTTTCTCTTGTCATGCCCCAATAGCTCTATGTCGATCTCGTCATGGGAATCGGGATAAACATCTGCATTCGACAACTGAACACAGCCTTTGTCTCGTTACTCATTCACCAAACTGGTAAAGCCAAACAGAAGATTGTAAGGGAAAACAACTTACATAAAAAGCCACTACAACCCCTGAAGTGAGACCTGATGGAAGCTTGATTGAAGCACTGAAAAATCCATAATGATATTTGTTTCTTGAGACCAAACCAGCACCTCCAAAAATGAACGGAGAAAAAATTATAAATGAAAACAGAGTTGGACCAAAAGAAATGCTAAGATCCAAATGTGAAATTTACCAGAAACTTTGTCGAGAGTGAGATCGACAGAGGACCCATTATTCCTCAGTTGGATATTCGAGGCCCCAAAAATCTTAGCAAAGCATTGATCTGTTGAGACACGAGGAACGAGATCCGTCAAACGTGGGACGCTCGGAGCCGTGTAATATCTACTACAAGAAGGAACAGCAAATAACATGCACAAAAAGATGAAGCTCAAAAGAGGCAATTCCATTATTACTCTGGAAAATCCCATATCCTTATCACAGAGATTGATGAACAAAGGTATGTGAACAATTCAACAATATATATTAGTAATTTTCAAGAGAAAAAGGTAGCAATAAGAATCTTTCTTAGTTGTTCAATAGCTGGCTGATGGCTCCTCTCTTCCTTCCTAGTATCTCTTTTTGGATATAGAAGTGTAGGTTGTATTGTATGAAACAAGGATCGGAAGTGTCACGTTCAGCTGATATTCACAAATTTGGCACTGCTTGTGGGGCTGTCTGCAAGGTGAGGGCATTTACTAAACTTCTTTGATTTGCTCTCTTTCTAAGAACAGTTCATGAACCATTGGTTCACTATTGGTTTTAGTGTGGATTTTTTGTGATGGGCCACAATCAAGAGAACCGACCATTTTCTTCAAATAATAAAGAAACGTTTTGGAATGTCTCTTACAAAAGCCATTATGAAAAAACCCACTAATTCTTTATCTCATTATTGTCAAATTGGAGGTGATTAGTAGGAAGGAAGTGATTAGACTTTTTGTAGACATAATAACGTGCTTTGCCATTGTTCCTATAGCTGGGAAGGACCGTGAGTTGTGGGATTTGGAGGTTGAAAGGAACTGCGATCGACCAATCATTTTATTAATCAAATAGAAAGGTATTAGTTAATTCAACTTTATTAAAGAGAGGATTCTTTTCGGGGTGTTTGGCCCACTAACTTTATTAGCTATATTAAATAATTTAGCTTTAATATTATGAAATAGAATGAGTTTGTATTTCGTTTAATCTCAAACTCTTGTTTGGATTGAGCGTTTGGGACGTTCGATTTGAAATATCAAACTCATTCTCTTCCTCATTTTTATTCTTCTTCATACTATTTTGATGCTTCACAATCTCATTCTCATTCTACTCTCGATATCTCATTTATTTCAAGCCTCCTAGATTTTTAGTAACCTTTATTACATTCCACTTCCCAAATGGTCTAATAGTGTTTATTATTAAAGTTTGCATGTTTATCAAGTAACCTCAACTTATAACTCTACAATCTAAACATATAAATTATAACTCCGTTTAGTGTGCTAAACACCACCGTTGATTGATATGGCTGAATTGGCTTTTTCTTTCTTTCTGTTTGTGTTGAGACAAAGCACCTGAGATCTCTAGTTACTGTAGTAGAGATTGTGTTGAAAAAAATTAAAGTAAGAAAATAAAAGAAATAGAAAAAGCAAAGACAGGATTTGGGGGTACTGTTTGGTGCATTTCACTGTCTCTTCATTCGCCAGAAGAATCATAGCTGGATTTGAGATGGGAAGAGAGAGAGAAAGAGAAAGAGATTGATGTGATTTGAGTACGAAATTGACATCTAATTTTGTAGGGCTTTGCAAATTGCAACTATACGTCAAAGAGGAGTCCTCTATGATCCTCATATCACTAATTCTCTCATCTTTGTATGTATGTATGTTGTTTAAATATTCTTCTCATACTATTTGTGAGGGGCCGTCATGATCAATCTATAGATCACATGGACCAAAGTAATATTTGAACTACTCTCAAGAGGCCTTCTCGTTTGCAAGGATTCGAGTCTTTTGATCATACTTATTTCAAGAATATATATATATATATATATAAGGGCCAAAAGGATCAAATCTATAAATCACACGGATTGAAGTAATATTTTAACTACTTTTAGGAGGTCGTCTTGTTTGCAAGGTATATAGGAGAACAAAGT

mRNA sequence

TTGGGCTGGGCCTTGCAGGCTCAACATCTCAACTCTCCAATCTATCGGCTATCTTGCCTTCGATCGGTGACTGGATCGGCGAAGAAAGACGGGTGTCCATTTCAATTTTTCTCTCTTCCTCTGTTCTTCCCAATTTCCGTCGACCACGAGCCGCTAAACAGCTTTTCCCGCTCTTTCGTGACTTCATCGGCGTTCTTTCTTCTCGTTCTTGCTGTGAAATTTCATCTCGAAATTGGAGAACATAGTTTCATCCGAGCTGTTCTTCAACTTGGCGCCGAATTGTTTACGATCAGGGAGGCTTTATAAATCTTCTGCCGAAGCTTAGGAAATGGCTACTTTGGCTGATTCCTTTCTAGCAGATCTTGATGAACTCTCTGATGAAGACAAGTTTCAGGGCGAAGCAGGTGCCGATGCCGAAAATATGGAAGAGGATATTGACGGGGACCTTGCCGACCTAGAAAGCCTTAATTATGAGGATCTGGATAGTGTCTCGAAACTGCAGAAAACACAAAGATACAATGATATTATGCAGAAAGTTGAAGATGCATTGCAGACGGATTCTAATATCTCAAATCAGGGATTTGTATTGGAAGATGATCCTGAGTACCAATTGATTGTAGAGTGTAATGCCTTGTCAGTGGATATTGAGAATGAAATTATTATTATTCACAACTTTATACGTGATAAATATCGACTGAAATTTCCAGAGCTTGAATCACTTGTGCACCATCCAATTGATTACGCTCGAGTTGTTAAGAAGATTGGGAATGAAGTGGATTTGACTCTTGTAGATTTAGAAGGACTTTTACCTTCTGCTGTTATTATGGTTGTTTCTGTCACAGCATCTACCACAAGTGGAAAGCCACTCCCTGAGGAAATTCTCCAGAAAACAATTGATGCATGTGATCGGGCTCTTGCCTTAGATTCAGCAAAGAAAATGGTTCTTACTTTTGTTGAAAGTAGAATGGGGCATATTGCACCAAATCTTTCAGCCATAGTTGGAAGTGCTGTTGCAGCAAAACTAATGGGAACTGCTGGTGGTCTTGTTGCTTTAGCTAAGATGCCTGCTTGCAATGTTCAGCTTCTTGGTGCAAAGAAAAAAAATCTTGCTGGGTTTTCCACAGCTACCTCACAATTTCGAGTAGGTTATATTGAGCAAACAGAGATATTCCAATCGACACCTCCACCTTTGAAGATGCGTGCTTGTCGACTCATATCTGCAAAGTCAACACTTGCAGCACGAGTTGACTCCACCATGGGAGATCCTACTGGGAAGACTGGCAGAGTCTTCAAAGATGAGATCCTTAAAAAAATTGAGAAATGGCAGGAACCTCCACCTGCAAAACAACCAAAACCTCTTCCGGTCCCTGATTCTGAACCTAAAAAGAAGAGAGGTGGCCGTCGATTAAGGAAGATGAAGGAAAGATATGCAACAACGGAGATGAGGAAGCTAGCTAACAGGATGCAGTTTGGGGTGCCTGAAGAGAGTTCTTTAGGAGATGGATTGGGGGAAGGATATGGAATGCTTGGTCAGGCTGGGAGTGGGAAGTTGCGTGTATCAGCTGCTCAGAGCAAGCTTGCTGCAAAAGTTGTTAAGAAGTTCAAGGAAAAACGCTATGGAAGCAGTGGTGCTACGTCTGGGCTGACCTCAAGTTTGGCATTTACTCCCGTACAAGGAATCGAGCTGTCAAATCCTCAGGCTCATTTGAACCAGCTAGGGAGCGGAACACAAAGCACCTACTTTTCTGAAACAGGAACATTTTCAAAAATTAGGAAAAACTGAGTCATTAGATCATCAAGCTTTATGTTTCGTGTTCGTGCTGTAAGCATACATGAATATGGCTACAGTTACGCTTTGTAATTCAGTACTAAGAGAGCAACAGTAATTTATTTTTCTATAATGCAAAGGTTTTCTTTTTCTGCTCCTAAGTTTTGGTTGATTATGCTTTATTATTTTTTGGCCTTAGTTGACTGATTAGTGATTAGCCTTTTGGCAGGCCTTTATCTTATACTTGGCTGCCGTACACTTTTCCTGGTGGTTTTGTATTTGTTTAGGACTTGAAGTCTGTCTCTTGGTTAGTGCCATTAAATAATCGTTAGTACTTCAGTAAAATCATCCAAACTTATAACCCTTTCCATATTCCCGTGGGGAAGTTTTATTTAGAACATTGATTTTGGGCAAAGCTAAAGTAACAAGATTACTACACTGTAGCCTTCGATTAGTAGTGCACAGCTGCAGGTACATCAAGTATCCATGATACGTGCCCATGCACGTCTCTTTAATGTATTTCTCATTTCATCTAGGACAAGCTGCTTTGATTTCTCTGCAGCCGTCAAATCACATTGATTTGGGTGTATTAAAAAGGAGGTGTGTTCTGTTGCGTCCACGGAAAGATGCTTCTGGATTTATGTAATTTAATATCTCTTAAATATATTTCACCGGGCCAATTTGGTAGTTCCAGATCAATTCAACTTCTTTATAGTTCATATAGTGTTGACTTACAAAATACTCAATCTTGCTGTATTATAAAAACTAATCTTCCATCTGCAGTTTGTAAGCACACGGGAGTAGCCCTTCGGAGCTTGGCATCCCAAAAGAAGATTGTAGGGAGCCAAATTTAAAGCTGTACCAGGTTCTCATAGCCGGAAAATTCTTCCTTTTTGACGGCTCCAATGAAACTCGTCTGTGGAGGTTTGCTTCTCCCTTCTGTCATTGACCAGCATCTTTGTCTTTTTTGAAGTCCAAAACACTGAAACAAAATGGCGTTGCCATCCCCACGTGAGATGTCTCGCATTGTCTTTGGCACATCTTTCTAGATAAGATTAATTTGCCTTGTCTAGATCTGTCTAGTGGGATCCAGTTCGTGCATCTCTGACAGTGAATTTTTTCTTGCCTCATGGACCAAATAAGCCAGCGCCTTTATTTCCCCATATACGGAAAGGGAAAGGGAAAAGGCTTTCTTTTTTCAAATAAAAGAAAAGTGAAAAAAAACAAGAGAGAGGCACAAAGACAAACATCTTCCTTCGCTTTTCATCCATGTCTTACTTTGGAGGTTCCCTAATGATTCCTCTATACCAGATTACAATACCCGTTTTATTCCTAACTTAGAATTTATGATGAAAGAATCTTAACAAGTATAAATAGAAAAAATACATCTATTTGCACTCTGGTGGTAGAACTTTGTATCGAGATGTATCTTTGCAATAGGAGTAGAACATGAGCTTCCTCCTTGCCCAATCCATTGCATCTACTTGCTGCTGCGATAGCTTGATAAATTCTGGACCCTCTACGGTATCTGGGCCCGATACGTTGGCTTTGGAACCTGAAGGAACAGTTGCTGTTGGTGTTAATATACCTCCATTGATTTCCATTTCTTCAAAAGAAGCTGTATATGGTGCATGCTTGTAGTCAACTGGGTATTTTCCTCCATGAGTTGCCCATTCTGAACCATCCCATATTGTGACGAAAACTGACATAGGCTTTAATGGATAGAACACTTCAGAATTTCGCAGCTCTCTGACTGGAACGTTATCCACCAGAAACCTGCTTGCATTTTGAGACACTTTTTAGGAAATTAAGGAAACCCGAAAACCCATGTTTTAAAATAAGGATTCTGCACTTTGGGTTGATTTTAGTGATTGAATTTCATGCACTTACACTGTATGATAGTTGTTCCAAATGATGGTGTAATCATGGTACTTCACGCTGGGATCAAACCAAAGATAGAATTTCTCTTCTCTTCCAGTCTTAACGCTTCCATTGGCATAAATATTTGTTTGAATAACCCAATCTTTTCTCTTGTCATGCCCCAATAGCTCTATGTCGATCTCGTCATGGGAATCGGGATAAACATCTGCATTCGACAACTGAACACAGCCTTTGTCTCGTTACTCATTCACCAAACTGGTAAAGCCAAACAGAAGATTGTAAGGGAAAACAACTTACATAAAAAGCCACTACAACCCCTGAAGTGAGACCTGATGGAAGCTTGATTGAAGCACTGAAAAATCCATAATGATATTTGTTTCTTGAGACCAAACCAGCACCTCCAAAAATGAACGGAGAAAAAATTATAAATGAAAACAGAGTTGGACCAAAAGAAATGCTAAGATCCAAATGTGAAATTTACCAGAAACTTTGTCGAGAGTGAGATCGACAGAGGACCCATTATTCCTCAGTTGGATATTCGAGGCCCCAAAAATCTTAGCAAAGCATTGATCTGTTGAGACACGAGGAACGAGATCCGTCAAACGTGGGACGCTCGGAGCCGTGTAATATCTACTACAAGAAGGAACAGCAAATAACATGCACAAAAAGATGAAGCTCAAAAGAGGCAATTCCATTATTACTCTGGAAAATCCCATATCCTTATCACAGAGATTGATGAACAAAGTATCTCTTTTTGGATATAGAAGTGTAGGTTGTATTGTATGAAACAAGGATCGGAAGTGTCACGTTCAGCTGATATTCACAAATTTGGCACTGCTTGTGGGGCTGTCTGCAAGCTGGGAAGGACCGTGAGTTGTGGGATTTGGAGGTTGAAAGGAACTGCGATCGACCAATCATTTTATTAATCAAATAGAAAGGTATTAGTTAATTCAACTTTATTAAAGAGAGGATTCTTTTCGGGGTGTTTGGCCCACTAACTTTATTAGCTATATTAAATAATTTAGCTTTAATATTATGAAATAGAATGAGTTTGTATTTCGTTTAATCTCAAACTCTTGTTTGGATTGAGCGTTTGGGACGTTCGATTTGAAATATCAAACTCATTCTCTTCCTCATTTTTATTCTTCTTCATACTATTTTGATGCTTCACAATCTCATTCTCATTCTACTCTCGATATCTCATTTATTTCAAGCCTCCTAGATTTTTAGTAACCTTTATTACATTCCACTTCCCAAATGGTCTAATAGTGTTTATTATTAAAGTTTGCATGTTTATCAAGTAACCTCAACTTATAACTCTACAATCTAAACATATAAATTATAACTCCGTTTAGTGTGCTAAACACCACCGTTGATTGATATGGCTGAATTGGCTTTTTCTTTCTTTCTGTTTGTGTTGAGACAAAGCACCTGAGATCTCTAGTTACTGTAGTAGAGATTGTGTTGAAAAAAATTAAAGTAAGAAAATAAAAGAAATAGAAAAAGCAAAGACAGGATTTGGGGGTACTGTTTGGTGCATTTCACTGTCTCTTCATTCGCCAGAAGAATCATAGCTGGATTTGAGATGGGAAGAGAGAGAGAAAGAGAAAGAGATTGATGTGATTTGAGTACGAAATTGACATCTAATTTTGTAGGGCTTTGCAAATTGCAACTATACGTCAAAGAGGAGTCCTCTATGATCCTCATATCACTAATTCTCTCATCTTTGTATGTATGTATGTTGTTTAAATATTCTTCTCATACTATTTGTGAGGGGCCGTCATGATCAATCTATAGATCACATGGACCAAAGTAATATTTGAACTACTCTCAAGAGGCCTTCTCGTTTGCAAGGATTCGAGTCTTTTGATCATACTTATTTCAAGAATATATATATATATATATATAAGGGCCAAAAGGATCAAATCTATAAATCACACGGATTGAAGTAATATTTTAACTACTTTTAGGAGGTCGTCTTGTTTGCAAGGTATATAGGAGAACAAAGT

Coding sequence (CDS)

ATGGCTACTTTGGCTGATTCCTTTCTAGCAGATCTTGATGAACTCTCTGATGAAGACAAGTTTCAGGGCGAAGCAGGTGCCGATGCCGAAAATATGGAAGAGGATATTGACGGGGACCTTGCCGACCTAGAAAGCCTTAATTATGAGGATCTGGATAGTGTCTCGAAACTGCAGAAAACACAAAGATACAATGATATTATGCAGAAAGTTGAAGATGCATTGCAGACGGATTCTAATATCTCAAATCAGGGATTTGTATTGGAAGATGATCCTGAGTACCAATTGATTGTAGAGTGTAATGCCTTGTCAGTGGATATTGAGAATGAAATTATTATTATTCACAACTTTATACGTGATAAATATCGACTGAAATTTCCAGAGCTTGAATCACTTGTGCACCATCCAATTGATTACGCTCGAGTTGTTAAGAAGATTGGGAATGAAGTGGATTTGACTCTTGTAGATTTAGAAGGACTTTTACCTTCTGCTGTTATTATGGTTGTTTCTGTCACAGCATCTACCACAAGTGGAAAGCCACTCCCTGAGGAAATTCTCCAGAAAACAATTGATGCATGTGATCGGGCTCTTGCCTTAGATTCAGCAAAGAAAATGGTTCTTACTTTTGTTGAAAGTAGAATGGGGCATATTGCACCAAATCTTTCAGCCATAGTTGGAAGTGCTGTTGCAGCAAAACTAATGGGAACTGCTGGTGGTCTTGTTGCTTTAGCTAAGATGCCTGCTTGCAATGTTCAGCTTCTTGGTGCAAAGAAAAAAAATCTTGCTGGGTTTTCCACAGCTACCTCACAATTTCGAGTAGGTTATATTGAGCAAACAGAGATATTCCAATCGACACCTCCACCTTTGAAGATGCGTGCTTGTCGACTCATATCTGCAAAGTCAACACTTGCAGCACGAGTTGACTCCACCATGGGAGATCCTACTGGGAAGACTGGCAGAGTCTTCAAAGATGAGATCCTTAAAAAAATTGAGAAATGGCAGGAACCTCCACCTGCAAAACAACCAAAACCTCTTCCGGTCCCTGATTCTGAACCTAAAAAGAAGAGAGGTGGCCGTCGATTAAGGAAGATGAAGGAAAGATATGCAACAACGGAGATGAGGAAGCTAGCTAACAGGATGCAGTTTGGGGTGCCTGAAGAGAGTTCTTTAGGAGATGGATTGGGGGAAGGATATGGAATGCTTGGTCAGGCTGGGAGTGGGAAGTTGCGTGTATCAGCTGCTCAGAGCAAGCTTGCTGCAAAAGTTGTTAAGAAGTTCAAGGAAAAACGCTATGGAAGCAGTGGTGCTACGTCTGGGCTGACCTCAAGTTTGGCATTTACTCCCGTACAAGGAATCGAGCTGTCAAATCCTCAGGCTCATTTGAACCAGCTAGGGAGCGGAACACAAAGCACCTACTTTTCTGAAACAGGAACATTTTCAAAAATTAGGAAAAACTGA

Protein sequence

MATLADSFLADLDELSDEDKFQGEAGADAENMEEDIDGDLADLESLNYEDLDSVSKLQKTQRYNDIMQKVEDALQTDSNISNQGFVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDKYRLKFPELESLVHHPIDYARVVKKIGNEVDLTLVDLEGLLPSAVIMVVSVTASTTSGKPLPEEILQKTIDACDRALALDSAKKMVLTFVESRMGHIAPNLSAIVGSAVAAKLMGTAGGLVALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRLISAKSTLAARVDSTMGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRLRKMKERYATTEMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSAAQSKLAAKVVKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHLNQLGSGTQSTYFSETGTFSKIRKN

Homology

[Close]

BLAST of Cmc10g0268571 vs. NCBI nr
Match: XP_008446223.1 (PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp31 isoform X1 [Cucumis melo] >KAA0034324.1 U4/U6 small nuclear ribonucleoprotein Prp31 isoform X1 [Cucumis melo var. makuwa] >TYK15595.1 U4/U6 small nuclear ribonucleoprotein Prp31 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 910.6 bits (2352), Expect = 5.7e-261
Identity = 484/484 (100.00%), Postives = 484/484 (100.00%), Query Frame = 0


Query: 1   MATLADSFLADLDELSDEDKFQGEAGADAENMEEDIDGDLADLESLNYEDLDSVSKLQKT 60
           MATLADSFLADLDELSDEDKFQGEAGADAENMEEDIDGDLADLESLNYEDLDSVSKLQKT
Sbjct: 1   MATLADSFLADLDELSDEDKFQGEAGADAENMEEDIDGDLADLESLNYEDLDSVSKLQKT 60

Query: 61  QRYNDIMQKVEDALQTDSNISNQGFVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDK 120
           QRYNDIMQKVEDALQTDSNISNQGFVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDK
Sbjct: 61  QRYNDIMQKVEDALQTDSNISNQGFVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDK 120

Query: 121 YRLKFPELESLVHHPIDYARVVKKIGNEVDLTLVDLEGLLPSAVIMVVSVTASTTSGKPL 180
           YRLKFPELESLVHHPIDYARVVKKIGNEVDLTLVDLEGLLPSAVIMVVSVTASTTSGKPL
Sbjct: 121 YRLKFPELESLVHHPIDYARVVKKIGNEVDLTLVDLEGLLPSAVIMVVSVTASTTSGKPL 180

Query: 181 PEEILQKTIDACDRALALDSAKKMVLTFVESRMGHIAPNLSAIVGSAVAAKLMGTAGGLV 240
           PEEILQKTIDACDRALALDSAKKMVLTFVESRMGHIAPNLSAIVGSAVAAKLMGTAGGLV
Sbjct: 181 PEEILQKTIDACDRALALDSAKKMVLTFVESRMGHIAPNLSAIVGSAVAAKLMGTAGGLV 240

Query: 241 ALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRLISAKS 300
           ALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRLISAKS
Sbjct: 241 ALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRLISAKS 300

Query: 301 TLAARVDSTMGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRL 360
           TLAARVDSTMGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRL
Sbjct: 301 TLAARVDSTMGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRL 360

Query: 361 RKMKERYATTEMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSAAQSKLAAK 420
           RKMKERYATTEMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSAAQSKLAAK
Sbjct: 361 RKMKERYATTEMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSAAQSKLAAK 420

Query: 421 VVKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHLNQLGSGTQSTYFSETGTFSK 480
           VVKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHLNQLGSGTQSTYFSETGTFSK
Sbjct: 421 VVKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHLNQLGSGTQSTYFSETGTFSK 480

Query: 481 IRKN 485
           IRKN
Sbjct: 481 IRKN 484

[Close]

BLAST of Cmc10g0268571 vs. NCBI nr
Match: XP_011655634.2 (U4/U6 small nuclear ribonucleoprotein Prp31 homolog isoform X1 [Cucumis sativus] >KAE8648722.1 hypothetical protein Csa_009047 [Cucumis sativus])

HSP 1 Score: 907.9 bits (2345), Expect = 3.7e-260
Identity = 482/484 (99.59%), Postives = 483/484 (99.79%), Query Frame = 0


Query: 1   MATLADSFLADLDELSDEDKFQGEAGADAENMEEDIDGDLADLESLNYEDLDSVSKLQKT 60
           MATLADSFLADLDELSDEDKFQGEAGADAENMEEDIDGDLADLESLNYEDLDSVSKLQKT
Sbjct: 1   MATLADSFLADLDELSDEDKFQGEAGADAENMEEDIDGDLADLESLNYEDLDSVSKLQKT 60

Query: 61  QRYNDIMQKVEDALQTDSNISNQGFVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDK 120
           QRYNDIMQKVEDALQTDSNISNQGFVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDK
Sbjct: 61  QRYNDIMQKVEDALQTDSNISNQGFVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDK 120

Query: 121 YRLKFPELESLVHHPIDYARVVKKIGNEVDLTLVDLEGLLPSAVIMVVSVTASTTSGKPL 180
           YRLKFPELESLVHHPIDYARVVKKIGNEVDLTLVDLEGLLPSAVIMVVSVTASTTSGKPL
Sbjct: 121 YRLKFPELESLVHHPIDYARVVKKIGNEVDLTLVDLEGLLPSAVIMVVSVTASTTSGKPL 180

Query: 181 PEEILQKTIDACDRALALDSAKKMVLTFVESRMGHIAPNLSAIVGSAVAAKLMGTAGGLV 240
           PEEILQKTIDACDRALALDSAKKMVLTFVESRMGHIAPNLSAIVGSAVAAKLMGTAGGL 
Sbjct: 181 PEEILQKTIDACDRALALDSAKKMVLTFVESRMGHIAPNLSAIVGSAVAAKLMGTAGGLA 240

Query: 241 ALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRLISAKS 300
           ALAKMPACNVQLLGAK+KNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRLISAKS
Sbjct: 241 ALAKMPACNVQLLGAKRKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRLISAKS 300

Query: 301 TLAARVDSTMGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRL 360
           TLAARVDSTMGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRL
Sbjct: 301 TLAARVDSTMGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRL 360

Query: 361 RKMKERYATTEMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSAAQSKLAAK 420
           RKMKERYATTEMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSAAQSKLAAK
Sbjct: 361 RKMKERYATTEMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSAAQSKLAAK 420

Query: 421 VVKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHLNQLGSGTQSTYFSETGTFSK 480
           VVKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHLNQLGSGTQSTYFSETGTFSK
Sbjct: 421 VVKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHLNQLGSGTQSTYFSETGTFSK 480

Query: 481 IRKN 485
           IRKN
Sbjct: 481 IRKN 484

[Close]

BLAST of Cmc10g0268571 vs. NCBI nr
Match: XP_038892283.1 (U4/U6 small nuclear ribonucleoprotein Prp31 homolog isoform X1 [Benincasa hispida])

HSP 1 Score: 880.2 bits (2273), Expect = 8.3e-252
Identity = 468/484 (96.69%), Postives = 474/484 (97.93%), Query Frame = 0


Query: 1   MATLADSFLADLDELSDEDKFQGEAGADAENMEEDIDGDLADLESLNYEDLDSVSKLQKT 60
           MATLADSFLADLDELSDED F  +  ADAENMEEDIDGDLADLESLNY+DLDSVSKLQ+T
Sbjct: 1   MATLADSFLADLDELSDEDNFVAKEDADAENMEEDIDGDLADLESLNYDDLDSVSKLQQT 60

Query: 61  QRYNDIMQKVEDALQTDSNISNQGFVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDK 120
           QRYNDIMQKVEDAL+TDSNISNQGFVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDK
Sbjct: 61  QRYNDIMQKVEDALRTDSNISNQGFVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDK 120

Query: 121 YRLKFPELESLVHHPIDYARVVKKIGNEVDLTLVDLEGLLPSAVIMVVSVTASTTSGKPL 180
           YRLKFPELESLVHHPIDYARVVKKIGNE+DLTLVDLEGLLPSAVIMVVSVTASTTSGKPL
Sbjct: 121 YRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAVIMVVSVTASTTSGKPL 180

Query: 181 PEEILQKTIDACDRALALDSAKKMVLTFVESRMGHIAPNLSAIVGSAVAAKLMGTAGGLV 240
           P+EILQKTIDACDRALALDSAKKMVL FVESRMG IAPNLSAIVGSAVAAKLMGTAGGL 
Sbjct: 181 PDEILQKTIDACDRALALDSAKKMVLNFVESRMGFIAPNLSAIVGSAVAAKLMGTAGGLA 240

Query: 241 ALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRLISAKS 300
           ALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRLISAKS
Sbjct: 241 ALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRLISAKS 300

Query: 301 TLAARVDSTMGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRL 360
           TLAARVDST GDPTGKTGR FKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRL
Sbjct: 301 TLAARVDSTRGDPTGKTGRAFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRL 360

Query: 361 RKMKERYATTEMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSAAQSKLAAK 420
           RKMKERYATTEMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSAAQSKLAAK
Sbjct: 361 RKMKERYATTEMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSAAQSKLAAK 420

Query: 421 VVKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHLNQLGSGTQSTYFSETGTFSK 480
           VVKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHLNQLGSGTQSTYFSETGTFSK
Sbjct: 421 VVKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHLNQLGSGTQSTYFSETGTFSK 480

Query: 481 IRKN 485
           IRKN
Sbjct: 481 IRKN 484

[Close]

BLAST of Cmc10g0268571 vs. NCBI nr
Match: XP_022956658.1 (U4/U6 small nuclear ribonucleoprotein Prp31 homolog isoform X1 [Cucurbita moschata] >XP_023004221.1 U4/U6 small nuclear ribonucleoprotein Prp31 homolog isoform X1 [Cucurbita maxima] >XP_023526610.1 U4/U6 small nuclear ribonucleoprotein Prp31 homolog isoform X1 [Cucurbita pepo subsp. pepo] >KAG6601489.1 U4/U6 small nuclear ribonucleoprotein Prp31-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 879.4 bits (2271), Expect = 1.4e-251
Identity = 467/484 (96.49%), Postives = 473/484 (97.73%), Query Frame = 0


Query: 1   MATLADSFLADLDELSDEDKFQGEAGADAENMEEDIDGDLADLESLNYEDLDSVSKLQKT 60
           MATLADSFLADLDELSDED F  E  ADAENMEEDIDGDLADLESLNY+DLDSVSKLQKT
Sbjct: 1   MATLADSFLADLDELSDEDNFLDEEDADAENMEEDIDGDLADLESLNYDDLDSVSKLQKT 60

Query: 61  QRYNDIMQKVEDALQTDSNISNQGFVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDK 120
           QRYNDIMQKV DAL+ DSN+SNQGFVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDK
Sbjct: 61  QRYNDIMQKVADALEMDSNVSNQGFVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDK 120

Query: 121 YRLKFPELESLVHHPIDYARVVKKIGNEVDLTLVDLEGLLPSAVIMVVSVTASTTSGKPL 180
           YRLKFPELESLVHHPIDYARVVKKIGNE+DLTLVDLEGLLPSAVIMVVSVTASTTSGKPL
Sbjct: 121 YRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAVIMVVSVTASTTSGKPL 180

Query: 181 PEEILQKTIDACDRALALDSAKKMVLTFVESRMGHIAPNLSAIVGSAVAAKLMGTAGGLV 240
           PEEILQKTIDACDRAL LDSAKKMVL FVESRMG+IAPNLSAIVGSAVAAKLMGTAGGLV
Sbjct: 181 PEEILQKTIDACDRALTLDSAKKMVLNFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGLV 240

Query: 241 ALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRLISAKS 300
           ALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRLI+AKS
Sbjct: 241 ALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRLIAAKS 300

Query: 301 TLAARVDSTMGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRL 360
           TLAARVDST GDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRL
Sbjct: 301 TLAARVDSTRGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRL 360

Query: 361 RKMKERYATTEMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSAAQSKLAAK 420
           RKMKERYATTEMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSAAQSKLAAK
Sbjct: 361 RKMKERYATTEMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSAAQSKLAAK 420

Query: 421 VVKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHLNQLGSGTQSTYFSETGTFSK 480
           VVKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHLNQLG GTQSTYFSETGTFSK
Sbjct: 421 VVKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHLNQLGGGTQSTYFSETGTFSK 480

Query: 481 IRKN 485
           IRKN
Sbjct: 481 IRKN 484

[Close]

BLAST of Cmc10g0268571 vs. NCBI nr
Match: KAG7032269.1 (U4/U6 small nuclear ribonucleoprotein Prp31-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 877.5 bits (2266), Expect = 5.4e-251
Identity = 466/483 (96.48%), Postives = 472/483 (97.72%), Query Frame = 0


Query: 2   ATLADSFLADLDELSDEDKFQGEAGADAENMEEDIDGDLADLESLNYEDLDSVSKLQKTQ 61
           ATLADSFLADLDELSDED F  E  ADAENMEEDIDGDLADLESLNY+DLDSVSKLQKTQ
Sbjct: 64  ATLADSFLADLDELSDEDNFLDEEDADAENMEEDIDGDLADLESLNYDDLDSVSKLQKTQ 123

Query: 62  RYNDIMQKVEDALQTDSNISNQGFVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDKY 121
           RYNDIMQKV DAL+ DSN+SNQGFVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDKY
Sbjct: 124 RYNDIMQKVADALEMDSNVSNQGFVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDKY 183

Query: 122 RLKFPELESLVHHPIDYARVVKKIGNEVDLTLVDLEGLLPSAVIMVVSVTASTTSGKPLP 181
           RLKFPELESLVHHPIDYARVVKKIGNE+DLTLVDLEGLLPSAVIMVVSVTASTTSGKPLP
Sbjct: 184 RLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAVIMVVSVTASTTSGKPLP 243

Query: 182 EEILQKTIDACDRALALDSAKKMVLTFVESRMGHIAPNLSAIVGSAVAAKLMGTAGGLVA 241
           EEILQKTIDACDRAL LDSAKKMVL FVESRMG+IAPNLSAIVGSAVAAKLMGTAGGLVA
Sbjct: 244 EEILQKTIDACDRALTLDSAKKMVLNFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGLVA 303

Query: 242 LAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRLISAKST 301
           LAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRLI+AKST
Sbjct: 304 LAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRLIAAKST 363

Query: 302 LAARVDSTMGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRLR 361
           LAARVDST GDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRLR
Sbjct: 364 LAARVDSTRGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRLR 423

Query: 362 KMKERYATTEMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSAAQSKLAAKV 421
           KMKERYATTEMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSAAQSKLAAKV
Sbjct: 424 KMKERYATTEMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSAAQSKLAAKV 483

Query: 422 VKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHLNQLGSGTQSTYFSETGTFSKI 481
           VKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHLNQLG GTQSTYFSETGTFSKI
Sbjct: 484 VKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHLNQLGGGTQSTYFSETGTFSKI 543

Query: 482 RKN 485
           RKN
Sbjct: 544 RKN 546

[Close]

BLAST of Cmc10g0268571 vs. ExPASy Swiss-Prot
Match: Q8RXN6 (U4/U6 small nuclear ribonucleoprotein Prp31 homolog OS=Arabidopsis thaliana OX=3702 GN=PRP31 PE=1 SV=1)

HSP 1 Score: 684.1 bits (1764), Expect = 1.1e-195
Identity = 368/485 (75.88%), Postives = 415/485 (85.57%), Query Frame = 0


Query: 1   MATLADSFLADLDELSDEDKFQGEAGADAENMEEDIDGDLADLESLNYEDLDSVSKLQKT 60
           MATL DSFLADLDELSD +    E   D    EED+D D+ADLE+LNY+DLD+VSKLQK+
Sbjct: 1   MATLEDSFLADLDELSDNEAELDENDGDVGKEEEDVDMDMADLETLNYDDLDNVSKLQKS 60

Query: 61  QRYNDIMQKVEDALQTDSNISNQGFVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDK 120
           QRY DIM KVE+AL  DS+ + +G VLEDDPEY+LIV+CN LSVDIENEI+I+HNFI+DK
Sbjct: 61  QRYADIMHKVEEALGKDSDGAEKGTVLEDDPEYKLIVDCNQLSVDIENEIVIVHNFIKDK 120

Query: 121 YRLKFPELESLVHHPIDYARVVKKIGNEVDLTLVDLEGLLPSAVIMVVSVTASTTSGKPL 180
           Y+LKF ELESLVHHPIDYA VVKKIGNE DL LVDL  LLPSA+IMVVSVTA TT G  L
Sbjct: 121 YKLKFQELESLVHHPIDYACVVKKIGNETDLALVDLADLLPSAIIMVVSVTALTTKGSAL 180

Query: 181 PEEILQKTIDACDRALALDSAKKMVLTFVESRMGHIAPNLSAIVGSAVAAKLMGTAGGLV 240
           PE++LQK ++ACDRAL LDSA+K VL FVES+MG IAPNLSAIVGSAVAAKLMGTAGGL 
Sbjct: 181 PEDVLQKVLEACDRALDLDSARKKVLEFVESKMGSIAPNLSAIVGSAVAAKLMGTAGGLS 240

Query: 241 ALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRLISAKS 300
           ALAKMPACNVQ+LG K+KNLAGFS+ATSQ RVGY+EQTEI+QSTPP L+ RA RL++AKS
Sbjct: 241 ALAKMPACNVQVLGHKRKNLAGFSSATSQSRVGYLEQTEIYQSTPPGLQARAGRLVAAKS 300

Query: 301 TLAARVDSTMGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRL 360
           TLAARVD+T GDP G +G+ F++EI KKIEKWQEPPPA+QPKPLPVPDSEPKK+RGGRRL
Sbjct: 301 TLAARVDATRGDPLGISGKAFREEIRKKIEKWQEPPPARQPKPLPVPDSEPKKRRGGRRL 360

Query: 361 RKMKERYATTEMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSAAQSKLA-- 420
           RKMKERY  T+MRKLANRM FG PEESSLGDGLGEGYGMLGQAGS +LRVS+  SKL   
Sbjct: 361 RKMKERYQVTDMRKLANRMAFGTPEESSLGDGLGEGYGMLGQAGSNRLRVSSVPSKLKIN 420

Query: 421 AKVVKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHLNQLGSGTQSTYFSETGTF 480
           AKV KK KE++Y     TSGLTSSLAFTPVQGIEL NPQ  L  LGSGTQSTYFSE+GTF
Sbjct: 421 AKVAKKLKERQYAGGATTSGLTSSLAFTPVQGIELCNPQQALG-LGSGTQSTYFSESGTF 480

Query: 481 SKIRK 484
           SK++K
Sbjct: 481 SKLKK 484

[Close]

BLAST of Cmc10g0268571 vs. ExPASy Swiss-Prot
Match: Q8CCF0 (U4/U6 small nuclear ribonucleoprotein Prp31 OS=Mus musculus OX=10090 GN=Prpf31 PE=1 SV=3)

HSP 1 Score: 381.7 bits (979), Expect = 1.2e-104
Identity = 231/494 (46.76%), Postives = 323/494 (65.38%), Query Frame = 0


Query: 3   TLADSFLADLDELSDEDKFQGEAGADAENMEEDIDGDLADLESLNY--EDLDSVSKLQKT 62
           +LAD  LADL+E ++E+    E G+  E  EE    D+ +   L+   + + S++KL  +
Sbjct: 2   SLADELLADLEEAAEEE----EGGSYGEEEEEPAIEDVQEETQLDLSGDSVKSIAKLWDS 61

Query: 63  QRYNDIMQKVEDALQTDSNISNQGFVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDK 122
           + + +IM K+E+ +   +N+S     +E  PEY++IV+ N L+V+IENE+ IIH FIRDK
Sbjct: 62  KMFAEIMMKIEEYISKQANVSEVMGPVEAAPEYRVIVDANNLTVEIENELNIIHKFIRDK 121

Query: 123 YRLKFPELESLVHHPIDYARVVKKIGNEVD--LTLVDLEGLLPSAVIMVVSVTASTTSGK 182
           Y  +FPELESLV + +DY R VK++GN +D      +L+ +L +A IMVVSVTASTT G+
Sbjct: 122 YSKRFPELESLVPNALDYIRTVKELGNSLDKCKNNENLQQILTNATIMVVSVTASTTQGQ 181

Query: 183 PLPEEILQKTIDACDRALALDSAKKMVLTFVESRMGHIAPNLSAIVGSAVAAKLMGTAGG 242
            L +E L++  +ACD AL L+++K  +  +VESRM  IAPNLS I+G++ AAK+MG AGG
Sbjct: 182 QLSDEELERLEEACDMALELNASKHRIYEYVESRMSFIAPNLSIIIGASTAAKIMGVAGG 241

Query: 243 LVALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRLISA 302
           L  L+KMPACN+ LLGA++K L+GFS+ +     GYI  ++I QS PP L+ +A RL++A
Sbjct: 242 LTNLSKMPACNIMLLGAQRKTLSGFSSTSVLPHTGYIYHSDIVQSLPPDLRRKAARLVAA 301

Query: 303 KSTLAARVDSTMGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGR 362
           K TLAARVDS      GK G   KDEI +K +KWQEPPP KQ KPLP P    +KKRGGR
Sbjct: 302 KCTLAARVDSFHESTEGKVGYELKDEIERKFDKWQEPPPVKQVKPLPAPLDGQRKKRGGR 361

Query: 363 RLRKMKERYATTEMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLR---VSAAQS 422
           R RKMKER   TE+RK ANRM FG  EE +  + LG   G LG++GSG++R   V+ A  
Sbjct: 362 RYRKMKERLGLTEIRKQANRMSFGEIEEDAYQEDLGFSLGHLGKSGSGRVRQTQVNEATK 421

Query: 423 KLAAKVVKKFKEKR---YGSSGA----TSGLTSSLAFTPVQGIELSNPQAHLNQLGSGTQ 482
              +K +++  +K+   YG        +SG  SS+AFTP+QG+E+ NPQA   ++    Q
Sbjct: 422 ARISKTLQRTLQKQSVVYGGKSTIRDRSSGTASSVAFTPLQGLEIVNPQAAEKKVAEANQ 481

[Close]

BLAST of Cmc10g0268571 vs. ExPASy Swiss-Prot
Match: Q8WWY3 (U4/U6 small nuclear ribonucleoprotein Prp31 OS=Homo sapiens OX=9606 GN=PRPF31 PE=1 SV=2)

HSP 1 Score: 377.9 bits (969), Expect = 1.8e-103
Identity = 230/494 (46.56%), Postives = 321/494 (64.98%), Query Frame = 0


Query: 3   TLADSFLADLDELSDEDKFQGEAGADAENMEEDIDGDLADLESLNY--EDLDSVSKLQKT 62
           +LAD  LADL+E ++E+    E G+  E  EE    D+ +   L+   + + +++KL  +
Sbjct: 2   SLADELLADLEEAAEEE----EGGSYGEEEEEPAIEDVQEETQLDLSGDSVKTIAKLWDS 61

Query: 63  QRYNDIMQKVEDALQTDSNISNQGFVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDK 122
           + + +IM K+E+ +   +  S     +E  PEY++IV+ N L+V+IENE+ IIH FIRDK
Sbjct: 62  KMFAEIMMKIEEYISKQAKASEVMGPVEAAPEYRVIVDANNLTVEIENELNIIHKFIRDK 121

Query: 123 YRLKFPELESLVHHPIDYARVVKKIGNEVD--LTLVDLEGLLPSAVIMVVSVTASTTSGK 182
           Y  +FPELESLV + +DY R VK++GN +D      +L+ +L +A IMVVSVTASTT G+
Sbjct: 122 YSKRFPELESLVPNALDYIRTVKELGNSLDKCKNNENLQQILTNATIMVVSVTASTTQGQ 181

Query: 183 PLPEEILQKTIDACDRALALDSAKKMVLTFVESRMGHIAPNLSAIVGSAVAAKLMGTAGG 242
            L EE L++  +ACD AL L+++K  +  +VESRM  IAPNLS I+G++ AAK+MG AGG
Sbjct: 182 QLSEEELERLEEACDMALELNASKHRIYEYVESRMSFIAPNLSIIIGASTAAKIMGVAGG 241

Query: 243 LVALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRLISA 302
           L  L+KMPACN+ LLGA++K L+GFS+ +     GYI  ++I QS PP L+ +A RL++A
Sbjct: 242 LTNLSKMPACNIMLLGAQRKTLSGFSSTSVLPHTGYIYHSDIVQSLPPDLRRKAARLVAA 301

Query: 303 KSTLAARVDSTMGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGR 362
           K TLAARVDS      GK G   KDEI +K +KWQEPPP KQ KPLP P    +KKRGGR
Sbjct: 302 KCTLAARVDSFHESTEGKVGYELKDEIERKFDKWQEPPPVKQVKPLPAPLDGQRKKRGGR 361

Query: 363 RLRKMKERYATTEMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLR---VSAAQS 422
           R RKMKER   TE+RK ANRM FG  EE +  + LG   G LG++GSG++R   V+ A  
Sbjct: 362 RYRKMKERLGLTEIRKQANRMSFGEIEEDAYQEDLGFSLGHLGKSGSGRVRQTQVNEATK 421

Query: 423 KLAAKVVKKFKEKR---YGSSGA----TSGLTSSLAFTPVQGIELSNPQAHLNQLGSGTQ 482
              +K +++  +K+   YG        +SG  SS+AFTP+QG+E+ NPQA   ++    Q
Sbjct: 422 ARISKTLQRTLQKQSVVYGGKSTIRDRSSGTASSVAFTPLQGLEIVNPQAAEKKVAEANQ 481

[Close]

BLAST of Cmc10g0268571 vs. ExPASy Swiss-Prot
Match: Q5U5C5 (U4/U6 small nuclear ribonucleoprotein Prp31 OS=Xenopus laevis OX=8355 GN=prpf31 PE=2 SV=1)

HSP 1 Score: 377.9 bits (969), Expect = 1.8e-103
Identity = 233/494 (47.17%), Postives = 323/494 (65.38%), Query Frame = 0


Query: 3   TLADSFLADLDELSDEDKFQGEAGADAENME--EDIDGDLADLESLNYEDLDSVSKLQKT 62
           +LAD  LADL+E ++E++   E   D +++E  E++D ++     LN E + S++KL  +
Sbjct: 2   SLADELLADLEEAAEEEE---ENLIDEDDLETIEEVDEEMQ--VDLNAESVKSIAKLSDS 61

Query: 63  QRYNDIMQKVEDALQTDSNISNQGFVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDK 122
           + +++I+ K+E  +Q     S     +E  PEY++IV+ N L+V+IENE+ IIH FIRDK
Sbjct: 62  KLFSEILLKIEGYIQKQPKASEVMGPVEAAPEYKVIVDANNLTVEIENELNIIHKFIRDK 121

Query: 123 YRLKFPELESLVHHPIDYARVVKKIGNEVD--LTLVDLEGLLPSAVIMVVSVTASTTSGK 182
           Y  +FPELESLV + +DY R VK++GN +D      +L+ +L +A IMVVSVTASTT G+
Sbjct: 122 YSKRFPELESLVPNALDYIRTVKELGNNLDKCKNNENLQQILTNATIMVVSVTASTTQGQ 181

Query: 183 PLPEEILQKTIDACDRALALDSAKKMVLTFVESRMGHIAPNLSAIVGSAVAAKLMGTAGG 242
            L +E L++  +ACD AL L+ +K  +  +VESRM  IAPNLS IVG++ AAK+MG AGG
Sbjct: 182 QLTDEELERIEEACDMALELNQSKHRIYEYVESRMSFIAPNLSIIVGASTAAKIMGIAGG 241

Query: 243 LVALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRLISA 302
           L  L+KMPACNV LLGA++K L GFS+ +     GYI  +EI QS P  L  +A RL+SA
Sbjct: 242 LTNLSKMPACNVMLLGAQRKTLTGFSSTSVLPHTGYIYHSEIVQSLPSDLHRKAARLVSA 301

Query: 303 KSTLAARVDSTMGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGR 362
           K TLA+RVDS   +P GK G   K+EI +K +KWQEPPP KQ KPLP P    +KKRGGR
Sbjct: 302 KCTLASRVDSFHENPEGKIGYDLKEEIERKFDKWQEPPPVKQVKPLPAPLDGQRKKRGGR 361

Query: 363 RLRKMKERYATTEMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLR---VSAAQS 422
           R RKMKER   TE+RK ANRM FG  EE +  + LG   G LG++GSG++R   V+ A  
Sbjct: 362 RYRKMKERLGLTEIRKQANRMSFGEIEEDAYQEDLGFSLGHLGKSGSGRIRQAQVNEATK 421

Query: 423 KLAAKVVKKFKEKR---YGSSGA----TSGLTSSLAFTPVQGIELSNPQAHLNQLGSGTQ 482
              +K +++  +K+   YG        +SG  SS+AFTP+QG+E+ NPQA   ++    Q
Sbjct: 422 ARISKTLQRTLQKQSVVYGGKSTVRDRSSGTASSVAFTPLQGLEIVNPQAAEKKVAEANQ 481

[Close]

BLAST of Cmc10g0268571 vs. ExPASy Swiss-Prot
Match: Q6NVP6 (U4/U6 small nuclear ribonucleoprotein Prp31 OS=Xenopus tropicalis OX=8364 GN=prpf31 PE=2 SV=1)

HSP 1 Score: 372.5 bits (955), Expect = 7.4e-102
Identity = 230/492 (46.75%), Postives = 317/492 (64.43%), Query Frame = 0


Query: 3   TLADSFLADLDELSDEDKFQGEAGADAENMEEDIDGDLADLESLNYEDLDSVSKLQKTQR 62
           +LAD  LADL+E ++E++       D E +EE  +    D   LN E + S++KL  ++ 
Sbjct: 2   SLADELLADLEEAAEEEEENLIDEDDLETIEEVQEEMQVD---LNAESVKSIAKLSDSKL 61

Query: 63  YNDIMQKVEDALQTDSNISNQGFVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDKYR 122
           +++I+ K++  ++     S     +E  PEY++IV+ N L+V+IENE+ IIH FIRDKY 
Sbjct: 62  FSEILLKIDGYIKKQPKASEVMGPVEAAPEYKVIVDANNLTVEIENELNIIHKFIRDKYS 121

Query: 123 LKFPELESLVHHPIDYARVVKKIGNEVD--LTLVDLEGLLPSAVIMVVSVTASTTSGKPL 182
            +FPELESLV + +DY R VK++GN +D      +L+ +L +A IMVVSVTASTT G+ L
Sbjct: 122 KRFPELESLVPNALDYIRTVKELGNNLDKCKNNENLQQILTNATIMVVSVTASTTQGQQL 181

Query: 183 PEEILQKTIDACDRALALDSAKKMVLTFVESRMGHIAPNLSAIVGSAVAAKLMGTAGGLV 242
            +E L++  +ACD AL L+ +K  +  +VESRM  IAPNLS IVG++ AAK+MG AGGL 
Sbjct: 182 TDEELERIEEACDMALELNQSKHRIYEYVESRMSFIAPNLSIIVGASTAAKIMGIAGGLT 241

Query: 243 ALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRLISAKS 302
            L+KMPACNV LLGA++K L+GFS+ +     GYI  ++I QS PP L  +A RL+SAK 
Sbjct: 242 NLSKMPACNVMLLGAQRKTLSGFSSTSVLPHTGYIYHSDIVQSLPPDLHRKAARLVSAKC 301

Query: 303 TLAARVDSTMGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRL 362
           TLAARVDS      GK G   K+EI +K +KWQEPPP KQ KPLP P    +KKRGGRR 
Sbjct: 302 TLAARVDSFHESSEGKVGYDLKEEIERKFDKWQEPPPVKQVKPLPAPLDGQRKKRGGRRY 361

Query: 363 RKMKERYATTEMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLR---VSAAQSKL 422
           RKMKER   TE+RK ANRM F   EE +  + LG   G LG++GSG++R   V+ A    
Sbjct: 362 RKMKERLGLTEIRKQANRMSFAEIEEDAYQEDLGFSLGHLGKSGSGRIRQAQVNEATKAR 421

Query: 423 AAKVVKKFKEKR---YGSSGA----TSGLTSSLAFTPVQGIELSNPQAHLNQLGSGTQST 482
            +K +++  +K+   YG        +SG  SS+AFTP+QG+E+ NPQA   ++    Q  
Sbjct: 422 ISKTLQRTLQKQSVVYGGKSTIRDRSSGTASSVAFTPLQGLEIVNPQAAEKKVAEANQK- 481

[Close]

BLAST of Cmc10g0268571 vs. ExPASy TrEMBL
Match: A0A5A7SSX6 (U4/U6 small nuclear ribonucleoprotein Prp31 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G00920 PE=3 SV=1)

HSP 1 Score: 910.6 bits (2352), Expect = 2.8e-261
Identity = 484/484 (100.00%), Postives = 484/484 (100.00%), Query Frame = 0


Query: 1   MATLADSFLADLDELSDEDKFQGEAGADAENMEEDIDGDLADLESLNYEDLDSVSKLQKT 60
           MATLADSFLADLDELSDEDKFQGEAGADAENMEEDIDGDLADLESLNYEDLDSVSKLQKT
Sbjct: 1   MATLADSFLADLDELSDEDKFQGEAGADAENMEEDIDGDLADLESLNYEDLDSVSKLQKT 60

Query: 61  QRYNDIMQKVEDALQTDSNISNQGFVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDK 120
           QRYNDIMQKVEDALQTDSNISNQGFVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDK
Sbjct: 61  QRYNDIMQKVEDALQTDSNISNQGFVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDK 120

Query: 121 YRLKFPELESLVHHPIDYARVVKKIGNEVDLTLVDLEGLLPSAVIMVVSVTASTTSGKPL 180
           YRLKFPELESLVHHPIDYARVVKKIGNEVDLTLVDLEGLLPSAVIMVVSVTASTTSGKPL
Sbjct: 121 YRLKFPELESLVHHPIDYARVVKKIGNEVDLTLVDLEGLLPSAVIMVVSVTASTTSGKPL 180

Query: 181 PEEILQKTIDACDRALALDSAKKMVLTFVESRMGHIAPNLSAIVGSAVAAKLMGTAGGLV 240
           PEEILQKTIDACDRALALDSAKKMVLTFVESRMGHIAPNLSAIVGSAVAAKLMGTAGGLV
Sbjct: 181 PEEILQKTIDACDRALALDSAKKMVLTFVESRMGHIAPNLSAIVGSAVAAKLMGTAGGLV 240

Query: 241 ALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRLISAKS 300
           ALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRLISAKS
Sbjct: 241 ALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRLISAKS 300

Query: 301 TLAARVDSTMGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRL 360
           TLAARVDSTMGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRL
Sbjct: 301 TLAARVDSTMGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRL 360

Query: 361 RKMKERYATTEMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSAAQSKLAAK 420
           RKMKERYATTEMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSAAQSKLAAK
Sbjct: 361 RKMKERYATTEMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSAAQSKLAAK 420

Query: 421 VVKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHLNQLGSGTQSTYFSETGTFSK 480
           VVKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHLNQLGSGTQSTYFSETGTFSK
Sbjct: 421 VVKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHLNQLGSGTQSTYFSETGTFSK 480

Query: 481 IRKN 485
           IRKN
Sbjct: 481 IRKN 484

[Close]

BLAST of Cmc10g0268571 vs. ExPASy TrEMBL
Match: A0A1S3BF76 (U4/U6 small nuclear ribonucleoprotein Prp31 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103489018 PE=3 SV=1)

HSP 1 Score: 910.6 bits (2352), Expect = 2.8e-261
Identity = 484/484 (100.00%), Postives = 484/484 (100.00%), Query Frame = 0


Query: 1   MATLADSFLADLDELSDEDKFQGEAGADAENMEEDIDGDLADLESLNYEDLDSVSKLQKT 60
           MATLADSFLADLDELSDEDKFQGEAGADAENMEEDIDGDLADLESLNYEDLDSVSKLQKT
Sbjct: 1   MATLADSFLADLDELSDEDKFQGEAGADAENMEEDIDGDLADLESLNYEDLDSVSKLQKT 60

Query: 61  QRYNDIMQKVEDALQTDSNISNQGFVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDK 120
           QRYNDIMQKVEDALQTDSNISNQGFVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDK
Sbjct: 61  QRYNDIMQKVEDALQTDSNISNQGFVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDK 120

Query: 121 YRLKFPELESLVHHPIDYARVVKKIGNEVDLTLVDLEGLLPSAVIMVVSVTASTTSGKPL 180
           YRLKFPELESLVHHPIDYARVVKKIGNEVDLTLVDLEGLLPSAVIMVVSVTASTTSGKPL
Sbjct: 121 YRLKFPELESLVHHPIDYARVVKKIGNEVDLTLVDLEGLLPSAVIMVVSVTASTTSGKPL 180

Query: 181 PEEILQKTIDACDRALALDSAKKMVLTFVESRMGHIAPNLSAIVGSAVAAKLMGTAGGLV 240
           PEEILQKTIDACDRALALDSAKKMVLTFVESRMGHIAPNLSAIVGSAVAAKLMGTAGGLV
Sbjct: 181 PEEILQKTIDACDRALALDSAKKMVLTFVESRMGHIAPNLSAIVGSAVAAKLMGTAGGLV 240

Query: 241 ALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRLISAKS 300
           ALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRLISAKS
Sbjct: 241 ALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRLISAKS 300

Query: 301 TLAARVDSTMGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRL 360
           TLAARVDSTMGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRL
Sbjct: 301 TLAARVDSTMGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRL 360

Query: 361 RKMKERYATTEMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSAAQSKLAAK 420
           RKMKERYATTEMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSAAQSKLAAK
Sbjct: 361 RKMKERYATTEMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSAAQSKLAAK 420

Query: 421 VVKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHLNQLGSGTQSTYFSETGTFSK 480
           VVKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHLNQLGSGTQSTYFSETGTFSK
Sbjct: 421 VVKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHLNQLGSGTQSTYFSETGTFSK 480

Query: 481 IRKN 485
           IRKN
Sbjct: 481 IRKN 484

[Close]

BLAST of Cmc10g0268571 vs. ExPASy TrEMBL
Match: A0A0A0KSD2 (Nop domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G602130 PE=3 SV=1)

HSP 1 Score: 906.4 bits (2341), Expect = 5.2e-260
Identity = 481/484 (99.38%), Postives = 482/484 (99.59%), Query Frame = 0


Query: 1   MATLADSFLADLDELSDEDKFQGEAGADAENMEEDIDGDLADLESLNYEDLDSVSKLQKT 60
           MAT ADSFLADLDELSDEDKFQGEAGADAENMEEDIDGDLADLESLNYEDLDSVSKLQKT
Sbjct: 1   MATFADSFLADLDELSDEDKFQGEAGADAENMEEDIDGDLADLESLNYEDLDSVSKLQKT 60

Query: 61  QRYNDIMQKVEDALQTDSNISNQGFVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDK 120
           QRYNDIMQKVEDALQTDSNISNQGFVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDK
Sbjct: 61  QRYNDIMQKVEDALQTDSNISNQGFVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDK 120

Query: 121 YRLKFPELESLVHHPIDYARVVKKIGNEVDLTLVDLEGLLPSAVIMVVSVTASTTSGKPL 180
           YRLKFPELESLVHHPIDYARVVKKIGNEVDLTLVDLEGLLPSAVIMVVSVTASTTSGKPL
Sbjct: 121 YRLKFPELESLVHHPIDYARVVKKIGNEVDLTLVDLEGLLPSAVIMVVSVTASTTSGKPL 180

Query: 181 PEEILQKTIDACDRALALDSAKKMVLTFVESRMGHIAPNLSAIVGSAVAAKLMGTAGGLV 240
           PEEILQKTIDACDRALALDSAKKMVLTFVESRMGHIAPNLSAIVGSAVAAKLMGTAGGL 
Sbjct: 181 PEEILQKTIDACDRALALDSAKKMVLTFVESRMGHIAPNLSAIVGSAVAAKLMGTAGGLA 240

Query: 241 ALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRLISAKS 300
           ALAKMPACNVQLLGAK+KNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRLISAKS
Sbjct: 241 ALAKMPACNVQLLGAKRKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRLISAKS 300

Query: 301 TLAARVDSTMGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRL 360
           TLAARVDSTMGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRL
Sbjct: 301 TLAARVDSTMGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRL 360

Query: 361 RKMKERYATTEMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSAAQSKLAAK 420
           RKMKERYATTEMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSAAQSKLAAK
Sbjct: 361 RKMKERYATTEMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSAAQSKLAAK 420

Query: 421 VVKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHLNQLGSGTQSTYFSETGTFSK 480
           VVKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHLNQLGSGTQSTYFSETGTFSK
Sbjct: 421 VVKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHLNQLGSGTQSTYFSETGTFSK 480

Query: 481 IRKN 485
           IRKN
Sbjct: 481 IRKN 484

[Close]

BLAST of Cmc10g0268571 vs. ExPASy TrEMBL
Match: A0A6J1KRI6 (U4/U6 small nuclear ribonucleoprotein Prp31 homolog isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111497587 PE=3 SV=1)

HSP 1 Score: 879.4 bits (2271), Expect = 6.9e-252
Identity = 467/484 (96.49%), Postives = 473/484 (97.73%), Query Frame = 0


Query: 1   MATLADSFLADLDELSDEDKFQGEAGADAENMEEDIDGDLADLESLNYEDLDSVSKLQKT 60
           MATLADSFLADLDELSDED F  E  ADAENMEEDIDGDLADLESLNY+DLDSVSKLQKT
Sbjct: 1   MATLADSFLADLDELSDEDNFLDEEDADAENMEEDIDGDLADLESLNYDDLDSVSKLQKT 60

Query: 61  QRYNDIMQKVEDALQTDSNISNQGFVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDK 120
           QRYNDIMQKV DAL+ DSN+SNQGFVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDK
Sbjct: 61  QRYNDIMQKVADALEMDSNVSNQGFVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDK 120

Query: 121 YRLKFPELESLVHHPIDYARVVKKIGNEVDLTLVDLEGLLPSAVIMVVSVTASTTSGKPL 180
           YRLKFPELESLVHHPIDYARVVKKIGNE+DLTLVDLEGLLPSAVIMVVSVTASTTSGKPL
Sbjct: 121 YRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAVIMVVSVTASTTSGKPL 180

Query: 181 PEEILQKTIDACDRALALDSAKKMVLTFVESRMGHIAPNLSAIVGSAVAAKLMGTAGGLV 240
           PEEILQKTIDACDRAL LDSAKKMVL FVESRMG+IAPNLSAIVGSAVAAKLMGTAGGLV
Sbjct: 181 PEEILQKTIDACDRALTLDSAKKMVLNFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGLV 240

Query: 241 ALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRLISAKS 300
           ALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRLI+AKS
Sbjct: 241 ALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRLIAAKS 300

Query: 301 TLAARVDSTMGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRL 360
           TLAARVDST GDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRL
Sbjct: 301 TLAARVDSTRGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRL 360

Query: 361 RKMKERYATTEMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSAAQSKLAAK 420
           RKMKERYATTEMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSAAQSKLAAK
Sbjct: 361 RKMKERYATTEMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSAAQSKLAAK 420

Query: 421 VVKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHLNQLGSGTQSTYFSETGTFSK 480
           VVKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHLNQLG GTQSTYFSETGTFSK
Sbjct: 421 VVKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHLNQLGGGTQSTYFSETGTFSK 480

Query: 481 IRKN 485
           IRKN
Sbjct: 481 IRKN 484

[Close]

BLAST of Cmc10g0268571 vs. ExPASy TrEMBL
Match: A0A6J1GXP7 (U4/U6 small nuclear ribonucleoprotein Prp31 homolog isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111458320 PE=3 SV=1)

HSP 1 Score: 879.4 bits (2271), Expect = 6.9e-252
Identity = 467/484 (96.49%), Postives = 473/484 (97.73%), Query Frame = 0


Query: 1   MATLADSFLADLDELSDEDKFQGEAGADAENMEEDIDGDLADLESLNYEDLDSVSKLQKT 60
           MATLADSFLADLDELSDED F  E  ADAENMEEDIDGDLADLESLNY+DLDSVSKLQKT
Sbjct: 1   MATLADSFLADLDELSDEDNFLDEEDADAENMEEDIDGDLADLESLNYDDLDSVSKLQKT 60

Query: 61  QRYNDIMQKVEDALQTDSNISNQGFVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDK 120
           QRYNDIMQKV DAL+ DSN+SNQGFVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDK
Sbjct: 61  QRYNDIMQKVADALEMDSNVSNQGFVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDK 120

Query: 121 YRLKFPELESLVHHPIDYARVVKKIGNEVDLTLVDLEGLLPSAVIMVVSVTASTTSGKPL 180
           YRLKFPELESLVHHPIDYARVVKKIGNE+DLTLVDLEGLLPSAVIMVVSVTASTTSGKPL
Sbjct: 121 YRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAVIMVVSVTASTTSGKPL 180

Query: 181 PEEILQKTIDACDRALALDSAKKMVLTFVESRMGHIAPNLSAIVGSAVAAKLMGTAGGLV 240
           PEEILQKTIDACDRAL LDSAKKMVL FVESRMG+IAPNLSAIVGSAVAAKLMGTAGGLV
Sbjct: 181 PEEILQKTIDACDRALTLDSAKKMVLNFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGLV 240

Query: 241 ALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRLISAKS 300
           ALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRLI+AKS
Sbjct: 241 ALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRLIAAKS 300

Query: 301 TLAARVDSTMGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRL 360
           TLAARVDST GDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRL
Sbjct: 301 TLAARVDSTRGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRL 360

Query: 361 RKMKERYATTEMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSAAQSKLAAK 420
           RKMKERYATTEMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSAAQSKLAAK
Sbjct: 361 RKMKERYATTEMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSAAQSKLAAK 420

Query: 421 VVKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHLNQLGSGTQSTYFSETGTFSK 480
           VVKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHLNQLG GTQSTYFSETGTFSK
Sbjct: 421 VVKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHLNQLGGGTQSTYFSETGTFSK 480

Query: 481 IRKN 485
           IRKN
Sbjct: 481 IRKN 484

[Close]

BLAST of Cmc10g0268571 vs. TAIR 10
Match: AT1G60170.1 (pre-mRNA processing ribonucleoprotein binding region-containing protein )

HSP 1 Score: 684.1 bits (1764), Expect = 8.1e-197
Identity = 368/485 (75.88%), Postives = 415/485 (85.57%), Query Frame = 0


Query: 1   MATLADSFLADLDELSDEDKFQGEAGADAENMEEDIDGDLADLESLNYEDLDSVSKLQKT 60
           MATL DSFLADLDELSD +    E   D    EED+D D+ADLE+LNY+DLD+VSKLQK+
Sbjct: 1   MATLEDSFLADLDELSDNEAELDENDGDVGKEEEDVDMDMADLETLNYDDLDNVSKLQKS 60

Query: 61  QRYNDIMQKVEDALQTDSNISNQGFVLEDDPEYQLIVECNALSVDIENEIIIIHNFIRDK 120
           QRY DIM KVE+AL  DS+ + +G VLEDDPEY+LIV+CN LSVDIENEI+I+HNFI+DK
Sbjct: 61  QRYADIMHKVEEALGKDSDGAEKGTVLEDDPEYKLIVDCNQLSVDIENEIVIVHNFIKDK 120

Query: 121 YRLKFPELESLVHHPIDYARVVKKIGNEVDLTLVDLEGLLPSAVIMVVSVTASTTSGKPL 180
           Y+LKF ELESLVHHPIDYA VVKKIGNE DL LVDL  LLPSA+IMVVSVTA TT G  L
Sbjct: 121 YKLKFQELESLVHHPIDYACVVKKIGNETDLALVDLADLLPSAIIMVVSVTALTTKGSAL 180

Query: 181 PEEILQKTIDACDRALALDSAKKMVLTFVESRMGHIAPNLSAIVGSAVAAKLMGTAGGLV 240
           PE++LQK ++ACDRAL LDSA+K VL FVES+MG IAPNLSAIVGSAVAAKLMGTAGGL 
Sbjct: 181 PEDVLQKVLEACDRALDLDSARKKVLEFVESKMGSIAPNLSAIVGSAVAAKLMGTAGGLS 240

Query: 241 ALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPPLKMRACRLISAKS 300
           ALAKMPACNVQ+LG K+KNLAGFS+ATSQ RVGY+EQTEI+QSTPP L+ RA RL++AKS
Sbjct: 241 ALAKMPACNVQVLGHKRKNLAGFSSATSQSRVGYLEQTEIYQSTPPGLQARAGRLVAAKS 300

Query: 301 TLAARVDSTMGDPTGKTGRVFKDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRL 360
           TLAARVD+T GDP G +G+ F++EI KKIEKWQEPPPA+QPKPLPVPDSEPKK+RGGRRL
Sbjct: 301 TLAARVDATRGDPLGISGKAFREEIRKKIEKWQEPPPARQPKPLPVPDSEPKKRRGGRRL 360

Query: 361 RKMKERYATTEMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSAAQSKLA-- 420
           RKMKERY  T+MRKLANRM FG PEESSLGDGLGEGYGMLGQAGS +LRVS+  SKL   
Sbjct: 361 RKMKERYQVTDMRKLANRMAFGTPEESSLGDGLGEGYGMLGQAGSNRLRVSSVPSKLKIN 420

Query: 421 AKVVKKFKEKRYGSSGATSGLTSSLAFTPVQGIELSNPQAHLNQLGSGTQSTYFSETGTF 480
           AKV KK KE++Y     TSGLTSSLAFTPVQGIEL NPQ  L  LGSGTQSTYFSE+GTF
Sbjct: 421 AKVAKKLKERQYAGGATTSGLTSSLAFTPVQGIELCNPQQALG-LGSGTQSTYFSESGTF 480

Query: 481 SKIRK 484
           SK++K
Sbjct: 481 SKLKK 484

[Close]

BLAST of Cmc10g0268571 vs. TAIR 10
Match: AT1G70400.1 (CONTAINS InterPro DOMAIN/s: NOSIC (InterPro:IPR012976); BEST Arabidopsis thaliana protein match is: pre-mRNA processing ribonucleoprotein binding region-containing protein (TAIR:AT1G60170.1); Has 479 Blast hits to 479 proteins in 178 species: Archae - 0; Bacteria - 0; Metazoa - 125; Fungi - 138; Plants - 124; Viruses - 0; Other Eukaryotes - 92 (source: NCBI BLink). )

HSP 1 Score: 208.4 bits (529), Expect = 1.3e-53
Identity = 115/172 (66.86%), Postives = 137/172 (79.65%), Query Frame = 0


Query: 39  DLADLESLNYEDLDSVSKLQKTQRYNDIMQKVEDALQTDSNISNQGFVLEDDPEYQLIVE 98
           D+ +L +L Y+DLDSVSKLQK++RY DIMQ+VE+AL        +G VLE     +LIV+
Sbjct: 2   DMTELNTLTYDDLDSVSKLQKSRRYADIMQQVEEAL--------EGSVLE---YKKLIVD 61

Query: 99  CNALSVDIENEIIIIHNFIRDKYRLKFPELESLVHHPIDYARVVKKIGNEVDLTLVDLEG 158
           C  L VDIENEI+I+ NFIRDKYR+KF ELE LV HPIDYARVVK+IGNE+DL LVDLEG
Sbjct: 62  CKQLLVDIENEIVIVQNFIRDKYRVKFQELELLVPHPIDYARVVKRIGNEMDLKLVDLEG 121

Query: 159 LLPSAVIMVVSVTASTTSGKPLPEEILQKTIDACDRALALDSAKKMVLTFVE 211
           LLPSA+IMV+ VTA TT G  LPE++L KTIDACDRAL LDSA+K VL FV+
Sbjct: 122 LLPSAMIMVLLVTALTTKGNQLPEDVLLKTIDACDRALDLDSARKKVLEFVD 162

[Close]

BLAST of Cmc10g0268571 vs. TAIR 10
Match: AT1G70400.2 (CONTAINS InterPro DOMAIN/s: NOSIC (InterPro:IPR012976); BEST Arabidopsis thaliana protein match is: pre-mRNA processing ribonucleoprotein binding region-containing protein (TAIR:AT1G60170.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 201.4 bits (511), Expect = 1.6e-51
Identity = 111/165 (67.27%), Postives = 132/165 (80.00%), Query Frame = 0


Query: 39  DLADLESLNYEDLDSVSKLQKTQRYNDIMQKVEDALQTDSNISNQGFVLEDDPEYQLIVE 98
           D+ +L +L Y+DLDSVSKLQK++RY DIMQ+VE+AL        +G VLE     +LIV+
Sbjct: 2   DMTELNTLTYDDLDSVSKLQKSRRYADIMQQVEEAL--------EGSVLE---YKKLIVD 61

Query: 99  CNALSVDIENEIIIIHNFIRDKYRLKFPELESLVHHPIDYARVVKKIGNEVDLTLVDLEG 158
           C  L VDIENEI+I+ NFIRDKYR+KF ELE LV HPIDYARVVK+IGNE+DL LVDLEG
Sbjct: 62  CKQLLVDIENEIVIVQNFIRDKYRVKFQELELLVPHPIDYARVVKRIGNEMDLKLVDLEG 121

Query: 159 LLPSAVIMVVSVTASTTSGKPLPEEILQKTIDACDRALALDSAKK 204
           LLPSA+IMV+ VTA TT G  LPE++L KTIDACDRAL LDSA+K
Sbjct: 122 LLPSAMIMVLLVTALTTKGNQLPEDVLLKTIDACDRALDLDSARK 155

[Close]

BLAST of Cmc10g0268571 vs. TAIR 10
Match: AT1G70400.3 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: egg cell; CONTAINS InterPro DOMAIN/s: NOSIC (InterPro:IPR012976); BEST Arabidopsis thaliana protein match is: pre-mRNA processing ribonucleoprotein binding region-containing protein (TAIR:AT1G60170.1); Has 484 Blast hits to 484 proteins in 190 species: Archae - 0; Bacteria - 0; Metazoa - 149; Fungi - 134; Plants - 124; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink). )

HSP 1 Score: 201.4 bits (511), Expect = 1.6e-51
Identity = 111/165 (67.27%), Postives = 132/165 (80.00%), Query Frame = 0


Query: 39  DLADLESLNYEDLDSVSKLQKTQRYNDIMQKVEDALQTDSNISNQGFVLEDDPEYQLIVE 98
           D+ +L +L Y+DLDSVSKLQK++RY DIMQ+VE+AL        +G VLE     +LIV+
Sbjct: 2   DMTELNTLTYDDLDSVSKLQKSRRYADIMQQVEEAL--------EGSVLE---YKKLIVD 61

Query: 99  CNALSVDIENEIIIIHNFIRDKYRLKFPELESLVHHPIDYARVVKKIGNEVDLTLVDLEG 158
           C  L VDIENEI+I+ NFIRDKYR+KF ELE LV HPIDYARVVK+IGNE+DL LVDLEG
Sbjct: 62  CKQLLVDIENEIVIVQNFIRDKYRVKFQELELLVPHPIDYARVVKRIGNEMDLKLVDLEG 121

Query: 159 LLPSAVIMVVSVTASTTSGKPLPEEILQKTIDACDRALALDSAKK 204
           LLPSA+IMV+ VTA TT G  LPE++L KTIDACDRAL LDSA+K
Sbjct: 122 LLPSAMIMVLLVTALTTKGNQLPEDVLLKTIDACDRALDLDSARK 155

[Close]

BLAST of Cmc10g0268571 vs. TAIR 10
Match: AT3G05060.1 (NOP56-like pre RNA processing ribonucleoprotein )

HSP 1 Score: 102.1 bits (253), Expect = 1.3e-21
Identity = 68/223 (30.49%), Postives = 113/223 (50.67%), Query Frame = 0


Query: 95  LIVECNALSVDIENEIIIIHNFIRDKYRLKFPELESLVHHPIDYARVVKKIGNEVDLTLV 154
           +I++   L  D++ E+      +R+ Y   FPEL  ++   I YA+ VK +GN V+   +
Sbjct: 160 MIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELAKIISDNILYAKSVKLMGNRVNAAKL 219

Query: 155 DLEGLLPSAVIMVVSVTASTTSGKPLPEEILQKTIDACDRALALDSAKKMVLTFVESRMG 214
           D   +L   +   +   A  + G  + +  L    + CD+ L+L   +  +  +++SRM 
Sbjct: 220 DFSEILADEIEADLKDAAVISMGTEVSDLDLLHIRELCDQVLSLSEYRAQLYDYLKSRMN 279

Query: 215 HIAPNLSAIVGSAVAAKLMGTAGGLVALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGY 274
            IAPNL+A+VG  V A+L+   G L+ L+K P   VQ+LGA+K       T  +  + G 
Sbjct: 280 TIAPNLTALVGELVGARLISHGGSLLNLSKQPGSTVQILGAEKALFRALKTKHATPKYGL 339

Query: 275 IEQTEIFQSTPPPLKMRACRLISAKSTLAARVDSTMGDPTGKT 318
           I    +     P  K +  R ++AK+ LA RVD+ +GD    T
Sbjct: 340 IFHASLVGQAAPKHKGKISRSLAAKTVLAIRVDA-LGDSQDNT 381

The following BLAST results are available for this feature:

BLAST of Cmc10g0268571 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008446223.1	5.7e-261	100.00	PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp31 isoform X1 [Cucumis melo]...	[more]
XP_011655634.2	3.7e-260	99.59	U4/U6 small nuclear ribonucleoprotein Prp31 homolog isoform X1 [Cucumis sativus]...	[more]
XP_038892283.1	8.3e-252	96.69	U4/U6 small nuclear ribonucleoprotein Prp31 homolog isoform X1 [Benincasa hispid...	[more]
XP_022956658.1	1.4e-251	96.49	U4/U6 small nuclear ribonucleoprotein Prp31 homolog isoform X1 [Cucurbita moscha...	[more]
KAG7032269.1	5.4e-251	96.48	U4/U6 small nuclear ribonucleoprotein Prp31-like protein, partial [Cucurbita arg...	[more]

BLAST of Cmc10g0268571 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8RXN6	1.1e-195	75.88	U4/U6 small nuclear ribonucleoprotein Prp31 homolog OS=Arabidopsis thaliana OX=3...	[more]
Q8CCF0	1.2e-104	46.76	U4/U6 small nuclear ribonucleoprotein Prp31 OS=Mus musculus OX=10090 GN=Prpf31 P...	[more]
Q8WWY3	1.8e-103	46.56	U4/U6 small nuclear ribonucleoprotein Prp31 OS=Homo sapiens OX=9606 GN=PRPF31 PE...	[more]
Q5U5C5	1.8e-103	47.17	U4/U6 small nuclear ribonucleoprotein Prp31 OS=Xenopus laevis OX=8355 GN=prpf31 ...	[more]
Q6NVP6	7.4e-102	46.75	U4/U6 small nuclear ribonucleoprotein Prp31 OS=Xenopus tropicalis OX=8364 GN=prp...	[more]

BLAST of Cmc10g0268571 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SSX6	2.8e-261	100.00	U4/U6 small nuclear ribonucleoprotein Prp31 isoform X1 OS=Cucumis melo var. maku...	[more]
A0A1S3BF76	2.8e-261	100.00	U4/U6 small nuclear ribonucleoprotein Prp31 isoform X1 OS=Cucumis melo OX=3656 G...	[more]
A0A0A0KSD2	5.2e-260	99.38	Nop domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G602130 PE=3 SV...	[more]
A0A6J1KRI6	6.9e-252	96.49	U4/U6 small nuclear ribonucleoprotein Prp31 homolog isoform X1 OS=Cucurbita maxi...	[more]
A0A6J1GXP7	6.9e-252	96.49	U4/U6 small nuclear ribonucleoprotein Prp31 homolog isoform X1 OS=Cucurbita mosc...	[more]

BLAST of Cmc10g0268571 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G60170.1	8.1e-197	75.88	pre-mRNA processing ribonucleoprotein binding region-containing protein	[more]
AT1G70400.1	1.3e-53	66.86	CONTAINS InterPro DOMAIN/s: NOSIC (InterPro:IPR012976); BEST Arabidopsis thalian...	[more]
AT1G70400.2	1.6e-51	67.27	CONTAINS InterPro DOMAIN/s: NOSIC (InterPro:IPR012976); BEST Arabidopsis thalian...	[more]
AT1G70400.3	1.6e-51	67.27	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]
AT3G05060.1	1.3e-21	30.49	NOP56-like pre RNA processing ribonucleoprotein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012976	NOSIC	SMART	SM00931	NOSIC_2	coord: 95..147 e-value: 6.4E-23 score: 92.1
IPR042239	Nop, C-terminal domain	GENE3D	1.10.246.90	Nop domain	coord: 217..342 e-value: 4.4E-39 score: 135.1
None	No IPR available	GENE3D	1.10.287.4070		coord: 53..216 e-value: 1.1E-55 score: 189.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 459..478
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 330..361
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 459..484
None	No IPR available	PANTHER	PTHR13904:SF0	U4/U6 SMALL NUCLEAR RIBONUCLEOPROTEIN PRP31	coord: 1..481
IPR002687	Nop domain	PFAM	PF01798	Nop	coord: 103..331 e-value: 4.7E-72 score: 242.2
IPR002687	Nop domain	PROSITE	PS51358	NOP	coord: 216..334 score: 36.709579
IPR019175	Prp31 C-terminal	PFAM	PF09785	Prp31_C	coord: 339..456 e-value: 3.8E-43 score: 147.3
IPR027105	U4/U6 small nuclear ribonucleoprotein Prp31	PANTHER	PTHR13904	PRE-MRNA SPLICING FACTOR PRP31	coord: 1..481
IPR036070	Nop domain superfamily	SUPERFAMILY	89124	Nop domain	coord: 88..334

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc10g0268571.1	Cmc10g0268571.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000244	spliceosomal tri-snRNP complex assembly
biological_process	GO:0000398	mRNA splicing, via spliceosome
cellular_component	GO:0071011	precatalytic spliceosome
cellular_component	GO:0005687	U4 snRNP
cellular_component	GO:0046540	U4/U6 x U5 tri-snRNP complex
molecular_function	GO:0003723	RNA binding