Cmc10g0267341 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc10g0267341
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	RING-type domain-containing protein
Location	CMiso1.1chr10: 2808411 .. 2809001 (-)
RNA-Seq Expression	Cmc10g0267341
Synteny	Cmc10g0267341

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCCCCACCAGACCCTTCTGATATTTCTTCTGCCCTCGAAAGGCTTCTTCTCAACAGAGATGTCTCTCTTGTCGCACCCCTTTTCTTGGGTTTCGCCTCTATGATCCGTTCATCCCAAAATCATGAAAATGAACCTACGCCCACTACTTTGCCTGATCGATTCATCTTCTTCAATCCCTTTTCCCATCAATTAATGGTGGTTCAAGCCACTCCCAAGGACGGCCAACCTCCGGCCTCTAAAGCTTCCATTAAAGCTATGCCGTCTCTCCCTGTTTCTGAAGTTACTGAATGTGTGATTTGTTTGGATGAGATTGAAGTCGGTGGTCTCGCTAAACAAATGCCTTGTAACCATAAATTTCATGGTGAGTGTATTCAGAAATGGTTGGAGTTACATGGGTCTTGCCCTGTTTGTAGATATCAGATGCCAATTGATGGTGATGATGAAGGGAAGAAGGTTGGTGATGAAGGGACAGAGAGTAGGGGAGAAACAGAGATTTGGGTTAGTTTTTCTTTTGATCATAGCATTAGAAATGGGGAATCTGTTCAAACCCCTTCTACTGATTCTGATCATTCTTATGTACAGTGA

mRNA sequence

ATGGCTTCCCCACCAGACCCTTCTGATATTTCTTCTGCCCTCGAAAGGCTTCTTCTCAACAGAGATGTCTCTCTTGTCGCACCCCTTTTCTTGGGTTTCGCCTCTATGATCCGTTCATCCCAAAATCATGAAAATGAACCTACGCCCACTACTTTGCCTGATCGATTCATCTTCTTCAATCCCTTTTCCCATCAATTAATGGTGGTTCAAGCCACTCCCAAGGACGGCCAACCTCCGGCCTCTAAAGCTTCCATTAAAGCTATGCCGTCTCTCCCTGTTTCTGAAGTTACTGAATGTGTGATTTGTTTGGATGAGATTGAAGTCGGTGGTCTCGCTAAACAAATGCCTTGTAACCATAAATTTCATGGTGAGTGTATTCAGAAATGGTTGGAGTTACATGGGTCTTGCCCTGTTTGTAGATATCAGATGCCAATTGATGGTGATGATGAAGGGAAGAAGGTTGGTGATGAAGGGACAGAGAGTAGGGGAGAAACAGAGATTTGGGTTAGTTTTTCTTTTGATCATAGCATTAGAAATGGGGAATCTGTTCAAACCCCTTCTACTGATTCTGATCATTCTTATGTACAGTGA

Coding sequence (CDS)

ATGGCTTCCCCACCAGACCCTTCTGATATTTCTTCTGCCCTCGAAAGGCTTCTTCTCAACAGAGATGTCTCTCTTGTCGCACCCCTTTTCTTGGGTTTCGCCTCTATGATCCGTTCATCCCAAAATCATGAAAATGAACCTACGCCCACTACTTTGCCTGATCGATTCATCTTCTTCAATCCCTTTTCCCATCAATTAATGGTGGTTCAAGCCACTCCCAAGGACGGCCAACCTCCGGCCTCTAAAGCTTCCATTAAAGCTATGCCGTCTCTCCCTGTTTCTGAAGTTACTGAATGTGTGATTTGTTTGGATGAGATTGAAGTCGGTGGTCTCGCTAAACAAATGCCTTGTAACCATAAATTTCATGGTGAGTGTATTCAGAAATGGTTGGAGTTACATGGGTCTTGCCCTGTTTGTAGATATCAGATGCCAATTGATGGTGATGATGAAGGGAAGAAGGTTGGTGATGAAGGGACAGAGAGTAGGGGAGAAACAGAGATTTGGGTTAGTTTTTCTTTTGATCATAGCATTAGAAATGGGGAATCTGTTCAAACCCCTTCTACTGATTCTGATCATTCTTATGTACAGTGA

Protein sequence

MASPPDPSDISSALERLLLNRDVSLVAPLFLGFASMIRSSQNHENEPTPTTLPDRFIFFNPFSHQLMVVQATPKDGQPPASKASIKAMPSLPVSEVTECVICLDEIEVGGLAKQMPCNHKFHGECIQKWLELHGSCPVCRYQMPIDGDDEGKKVGDEGTESRGETEIWVSFSFDHSIRNGESVQTPSTDSDHSYVQ

Homology

[Close]

BLAST of Cmc10g0267341 vs. NCBI nr
Match: XP_008446365.1 (PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis melo] >KAA0034425.1 E3 ubiquitin-protein ligase RING1-like [Cucumis melo var. makuwa] >TYK17709.1 E3 ubiquitin-protein ligase RING1-like [Cucumis melo var. makuwa])

HSP 1 Score: 407.9 bits (1047), Expect = 4.9e-110
Identity = 195/196 (99.49%), Postives = 196/196 (100.00%), Query Frame = 0


Query: 1   MASPPDPSDISSALERLLLNRDVSLVAPLFLGFASMIRSSQNHENEPTPTTLPDRFIFFN 60
           MASPPDPSDISSALERLLLNRDVSL+APLFLGFASMIRSSQNHENEPTPTTLPDRFIFFN
Sbjct: 1   MASPPDPSDISSALERLLLNRDVSLIAPLFLGFASMIRSSQNHENEPTPTTLPDRFIFFN 60

Query: 61  PFSHQLMVVQATPKDGQPPASKASIKAMPSLPVSEVTECVICLDEIEVGGLAKQMPCNHK 120
           PFSHQLMVVQATPKDGQPPASKASIKAMPSLPVSEVTECVICLDEIEVGGLAKQMPCNHK
Sbjct: 61  PFSHQLMVVQATPKDGQPPASKASIKAMPSLPVSEVTECVICLDEIEVGGLAKQMPCNHK 120

Query: 121 FHGECIQKWLELHGSCPVCRYQMPIDGDDEGKKVGDEGTESRGETEIWVSFSFDHSIRNG 180
           FHGECIQKWLELHGSCPVCRYQMPIDGDDEGKKVGDEGTESRGETEIWVSFSFDHSIRNG
Sbjct: 121 FHGECIQKWLELHGSCPVCRYQMPIDGDDEGKKVGDEGTESRGETEIWVSFSFDHSIRNG 180

Query: 181 ESVQTPSTDSDHSYVQ 197
           ESVQTPSTDSDHSYVQ
Sbjct: 181 ESVQTPSTDSDHSYVQ 196

[Close]

BLAST of Cmc10g0267341 vs. NCBI nr
Match: XP_011655684.1 (E3 ubiquitin-protein ligase MPSR1 [Cucumis sativus] >KGN51927.1 hypothetical protein Csa_009131 [Cucumis sativus])

HSP 1 Score: 386.3 bits (991), Expect = 1.5e-103
Identity = 183/196 (93.37%), Postives = 191/196 (97.45%), Query Frame = 0


Query: 1   MASPPDPSDISSALERLLLNRDVSLVAPLFLGFASMIRSSQNHENEPTPTTLPDRFIFFN 60
           MASPPDPSD++SALERLLLNRDVSL+APLFLGFASM+RSSQN E++PTPTTLPDRFIFFN
Sbjct: 1   MASPPDPSDLASALERLLLNRDVSLIAPLFLGFASMVRSSQNQESDPTPTTLPDRFIFFN 60

Query: 61  PFSHQLMVVQATPKDGQPPASKASIKAMPSLPVSEVTECVICLDEIEVGGLAKQMPCNHK 120
           PFSHQLMVVQATPK GQPPASKASIKAMPSLPVSEVTECVICLDEIEVG LAKQMPCNHK
Sbjct: 61  PFSHQLMVVQATPKHGQPPASKASIKAMPSLPVSEVTECVICLDEIEVGRLAKQMPCNHK 120

Query: 121 FHGECIQKWLELHGSCPVCRYQMPIDGDDEGKKVGDEGTESRGETEIWVSFSFDHSIRNG 180
           FHG+CIQKWLELHGSCPVCRYQMPIDGDDEGKKVGDEG ESRGETEIWVSFSFDHSI NG
Sbjct: 121 FHGDCIQKWLELHGSCPVCRYQMPIDGDDEGKKVGDEGAESRGETEIWVSFSFDHSIGNG 180

Query: 181 ESVQTPSTDSDHSYVQ 197
           ESVQTPST+SDHSYVQ
Sbjct: 181 ESVQTPSTESDHSYVQ 196

[Close]

BLAST of Cmc10g0267341 vs. NCBI nr
Match: XP_038891708.1 (E3 ubiquitin-protein ligase MPSR1-like [Benincasa hispida])

HSP 1 Score: 363.2 bits (931), Expect = 1.4e-96
Identity = 170/196 (86.73%), Postives = 188/196 (95.92%), Query Frame = 0


Query: 1   MASPPDPSDISSALERLLLNRDVSLVAPLFLGFASMIRSSQNHENEPTPTTLPDRFIFFN 60
           MAS PDPS++ SALERL LNRDVSL+APLFLGFASMIR+SQ+ E E TPTTLPDRFIFFN
Sbjct: 1   MASQPDPSELGSALERLFLNRDVSLIAPLFLGFASMIRTSQDQEIEATPTTLPDRFIFFN 60

Query: 61  PFSHQLMVVQATPKDGQPPASKASIKAMPSLPVSEVTECVICLDEIEVGGLAKQMPCNHK 120
           PF+HQL+V+QATPKDGQPPASKASIKAMPS+PVSE+TECVICL+EIEVGGL+KQMPCNHK
Sbjct: 61  PFAHQLIVIQATPKDGQPPASKASIKAMPSVPVSELTECVICLEEIEVGGLSKQMPCNHK 120

Query: 121 FHGECIQKWLELHGSCPVCRYQMPIDGDDEGKKVGDEGTESRGETEIWVSFSFDHSIRNG 180
           FHG+CIQKWLELHGSCPVCRYQMPIDG+DEGKKV +EGTESRGETEIWVSFSFD++IRNG
Sbjct: 121 FHGDCIQKWLELHGSCPVCRYQMPIDGEDEGKKVDNEGTESRGETEIWVSFSFDNTIRNG 180

Query: 181 ESVQTPSTDSDHSYVQ 197
           ES+QTPSTDSDHS VQ
Sbjct: 181 ESIQTPSTDSDHSDVQ 196

[Close]

BLAST of Cmc10g0267341 vs. NCBI nr
Match: KAG6601438.1 (E3 ubiquitin-protein ligase MPSR1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 302.0 bits (772), Expect = 3.8e-78
Identity = 149/201 (74.13%), Postives = 171/201 (85.07%), Query Frame = 0


Query: 1   MASPPDPSDISSALERLL-LNRDVSLVAPLFLGFASMIRSSQNHENEP---TPTTLPDRF 60
           MAS P  S++SSA E L+ +NRD+S +APLFLGFAS+IRS+      P   T  TLP+RF
Sbjct: 1   MASDPVASELSSAFESLVFINRDISPIAPLFLGFASVIRSADPQSPNPEIQTIPTLPNRF 60

Query: 61  IFFNPFSHQLMVVQATPKDGQPPASKASIKAMPSLPVSEVTECVICLDEIEVGGLAKQMP 120
           IFFNPF  QLMV+QATPK+G PPASKASIKAMPSLPVSE+TECVICL+EIE G LAKQMP
Sbjct: 61  IFFNPFPPQLMVIQATPKEGLPPASKASIKAMPSLPVSELTECVICLEEIEAGDLAKQMP 120

Query: 121 CNHKFHGECIQKWLELHGSCPVCRYQMPIDGDDEGKKVGDEGTESRGETEIWVSFSFDHS 180
           C+HKFHG+CI+KWLELHGSCP+CRYQMPID +DEGKKV +EG+E RGE EIWVSFSFD+ 
Sbjct: 121 CSHKFHGDCIEKWLELHGSCPICRYQMPIDDEDEGKKVDEEGSERRGEREIWVSFSFDNV 180

Query: 181 IRNGESVQT-PSTDSDHSYVQ 197
            RNGESVQT PSTDSDHS+VQ
Sbjct: 181 TRNGESVQTPPSTDSDHSFVQ 201

[Close]

BLAST of Cmc10g0267341 vs. NCBI nr
Match: XP_023547759.1 (E3 ubiquitin-protein ligase RING1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 302.0 bits (772), Expect = 3.8e-78
Identity = 148/201 (73.63%), Postives = 170/201 (84.58%), Query Frame = 0


Query: 1   MASPPDPSDISSALERLL-LNRDVSLVAPLFLGFASMIRSSQNHENEP---TPTTLPDRF 60
           MAS P  S++SSA E L+ +NRD+S +APLFLGFAS+IRS+      P   T  TLP+RF
Sbjct: 1   MASDPVASELSSAFESLVFINRDISPIAPLFLGFASVIRSADPQSPNPEIQTIPTLPNRF 60

Query: 61  IFFNPFSHQLMVVQATPKDGQPPASKASIKAMPSLPVSEVTECVICLDEIEVGGLAKQMP 120
           IFFNPF  QLMV+ ATPK+GQPPASKASIKAMPSLPVSE+TECVICL+EIE G LAKQMP
Sbjct: 61  IFFNPFPPQLMVIHATPKEGQPPASKASIKAMPSLPVSELTECVICLEEIEAGDLAKQMP 120

Query: 121 CNHKFHGECIQKWLELHGSCPVCRYQMPIDGDDEGKKVGDEGTESRGETEIWVSFSFDHS 180
           C HKFHG+CI+KWLELHGSCP+CRYQMPID +DEGKK+ +EG+E RGE EIWVSFSFD+ 
Sbjct: 121 CTHKFHGDCIEKWLELHGSCPICRYQMPIDDEDEGKKIDEEGSERRGEREIWVSFSFDNV 180

Query: 181 IRNGESVQT-PSTDSDHSYVQ 197
            RNGESVQT PSTDSDHS+VQ
Sbjct: 181 TRNGESVQTPPSTDSDHSFVQ 201

[Close]

BLAST of Cmc10g0267341 vs. ExPASy Swiss-Prot
Match: Q9LQX2 (E3 ubiquitin-protein ligase MPSR1 OS=Arabidopsis thaliana OX=3702 GN=MPSR1 PE=1 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 4.6e-34
Identity = 78/185 (42.16%), Postives = 109/185 (58.92%), Query Frame = 0


Query: 8   SDISSALERLLLNRDVSLVAPLFLGFASMIRSSQNHENEPTPTTLPDRFIFFNPFSHQLM 67
           ++ SS   R L NRD+ L  P  LGF+   + S N +++   ++  +R I  NPF+  ++
Sbjct: 11  TETSSVSGRFLRNRDLYLFLPFLLGFSD--QESSNGDDDDVASS-RERIILVNPFTQGMI 70

Query: 68  VVQATP-------------KDGQPPASKASIKAMPSLPVSEVT-ECVICLDEIEVGGLAK 127
           V++ +              ++G+PPASKASI AMP + +     ECVICL+E +     K
Sbjct: 71  VLEGSSGMNPLLRSLLESREEGRPPASKASIDAMPIVEIDGCEGECVICLEEWKSEETVK 130

Query: 128 QMPCNHKFHGECIQKWLELHGSCPVCRYQMPIDGDDEGKKVGDEGTESRGETEIWVSFSF 179
           +MPC H+FHG CI+KWL  HGSCPVCRY+MP+DGD+ GKK  D         EIWV FSF
Sbjct: 131 EMPCKHRFHGGCIEKWLGFHGSCPVCRYEMPVDGDEIGKKRND-------GNEIWVRFSF 185

[Close]

BLAST of Cmc10g0267341 vs. ExPASy Swiss-Prot
Match: Q8LPN7 (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19950 PE=1 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.1e-22
Identity = 58/140 (41.43%), Postives = 82/140 (58.57%), Query Frame = 0


Query: 41  QNHENEPTPTTLPDRF--IFFNPFSHQLMVVQATPKD----GQPPASKASIKAMPSLPV- 100
           +NH ++P    +P  F   FF P   QL + Q    D    G PPASK++I A+P++ V 
Sbjct: 148 ENHPSDP-GNRMPGNFGDYFFGPGLEQL-IQQLAENDPNRYGTPPASKSAIDALPTVKVT 207

Query: 101 -----SEVTECVICLDEIEVGGLAKQMPCNHKFHGECIQKWLELHGSCPVCRYQMPIDGD 160
                SE+ +C +C+DE E G   KQMPC H FH +C+  WLELH SCPVCR+++P D  
Sbjct: 208 KDMLKSEMNQCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLELHNSCPVCRFELPTDDP 267

Query: 161 D-EGKKVGDEGT-ESRGETE 167
           D E +  G +G+ + +G  E
Sbjct: 268 DYENRSQGSQGSGDGQGSVE 285

[Close]

BLAST of Cmc10g0267341 vs. ExPASy Swiss-Prot
Match: Q6AVN2 (E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp. japonica OX=39947 GN=SIRP1 PE=1 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 3.1e-22
Identity = 44/91 (48.35%), Postives = 62/91 (68.13%), Query Frame = 0


Query: 74  KDGQPPASKASIKAMPSLPVSEVTECVICLDEIEVGGLAKQMPCNHKFHGECIQKWLELH 133
           ++G PPA K +++A+P++ + EV  C +CLD++EVG  AKQMPC HKFH  CI  WLELH
Sbjct: 174 RNGTPPAKKEAVEALPTVKIEEVVSCSVCLDDLEVGSQAKQMPCEHKFHSSCILPWLELH 233

Query: 134 GSCPVCRYQMPIDGDDEGKKVGDEGTESRGE 165
            SCPVCR+++P    +E K + +     R E
Sbjct: 234 SSCPVCRFELP---SEETKDLNEPSNIGRVE 261

[Close]

BLAST of Cmc10g0267341 vs. ExPASy Swiss-Prot
Match: P0CH30 (E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 1.3e-20
Identity = 53/135 (39.26%), Postives = 80/135 (59.26%), Query Frame = 0


Query: 36  MIRSSQNHENEPTPTTLPDRFIFFNPFSHQLMVVQATPKD----GQPPASKASIKAMPSL 95
           +I+++ + +    P  + D FI   P   QL + Q    D    G PPASK++I+A+P +
Sbjct: 154 VIQNNPSDQGFRLPANIGDYFI--GPGLEQL-IQQLAENDPNRYGTPPASKSAIEALPLV 213

Query: 96  PV------SEVTECVICLDEIEVGGLAKQMPCNHKFHGECIQKWLELHGSCPVCRYQMPI 155
            +      SE  +C +C+D+ E G  AKQMPC H +H +C+  WLELH SCPVCR+++P 
Sbjct: 214 NITKSNLNSEFNQCAVCMDDFEEGTEAKQMPCKHLYHKDCLLPWLELHNSCPVCRHELPT 273

Query: 156 DGDDEGKKV-GDEGT 160
           D  D  ++V G +GT
Sbjct: 274 DDPDYERRVRGAQGT 285

[Close]

BLAST of Cmc10g0267341 vs. ExPASy Swiss-Prot
Match: O22197 (Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana OX=3702 GN=RHC1A PE=2 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 6.6e-17
Identity = 40/95 (42.11%), Postives = 57/95 (60.00%), Query Frame = 0


Query: 58  FFNPFSHQL--MVVQATPKDGQPPASKASIKAMPSLPV------SEVTECVICLDEIEVG 117
           FF P   +L   +   T + G PPA +++I A+P++ +      S  + C +C DE E+G
Sbjct: 141 FFGPGLEELFEQLSAGTTRRGPPPAPRSAIDALPTIKIAQRHLRSSDSNCPVCKDEFELG 200

Query: 118 GLAKQMPCNHKFHGECIQKWLELHGSCPVCRYQMP 145
             AKQMPCNH +H +CI  WL  H SCPVCR ++P
Sbjct: 201 SEAKQMPCNHIYHSDCIVPWLVQHNSCPVCRQELP 235

[Close]

BLAST of Cmc10g0267341 vs. ExPASy TrEMBL
Match: A0A5D3D3N1 (E3 ubiquitin-protein ligase RING1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1932G00370 PE=4 SV=1)

HSP 1 Score: 407.9 bits (1047), Expect = 2.4e-110
Identity = 195/196 (99.49%), Postives = 196/196 (100.00%), Query Frame = 0


Query: 1   MASPPDPSDISSALERLLLNRDVSLVAPLFLGFASMIRSSQNHENEPTPTTLPDRFIFFN 60
           MASPPDPSDISSALERLLLNRDVSL+APLFLGFASMIRSSQNHENEPTPTTLPDRFIFFN
Sbjct: 1   MASPPDPSDISSALERLLLNRDVSLIAPLFLGFASMIRSSQNHENEPTPTTLPDRFIFFN 60

Query: 61  PFSHQLMVVQATPKDGQPPASKASIKAMPSLPVSEVTECVICLDEIEVGGLAKQMPCNHK 120
           PFSHQLMVVQATPKDGQPPASKASIKAMPSLPVSEVTECVICLDEIEVGGLAKQMPCNHK
Sbjct: 61  PFSHQLMVVQATPKDGQPPASKASIKAMPSLPVSEVTECVICLDEIEVGGLAKQMPCNHK 120

Query: 121 FHGECIQKWLELHGSCPVCRYQMPIDGDDEGKKVGDEGTESRGETEIWVSFSFDHSIRNG 180
           FHGECIQKWLELHGSCPVCRYQMPIDGDDEGKKVGDEGTESRGETEIWVSFSFDHSIRNG
Sbjct: 121 FHGECIQKWLELHGSCPVCRYQMPIDGDDEGKKVGDEGTESRGETEIWVSFSFDHSIRNG 180

Query: 181 ESVQTPSTDSDHSYVQ 197
           ESVQTPSTDSDHSYVQ
Sbjct: 181 ESVQTPSTDSDHSYVQ 196

[Close]

BLAST of Cmc10g0267341 vs. ExPASy TrEMBL
Match: A0A1S3BFQ2 (E3 ubiquitin-protein ligase RING1-like OS=Cucumis melo OX=3656 GN=LOC103489128 PE=4 SV=1)

HSP 1 Score: 407.9 bits (1047), Expect = 2.4e-110
Identity = 195/196 (99.49%), Postives = 196/196 (100.00%), Query Frame = 0


Query: 1   MASPPDPSDISSALERLLLNRDVSLVAPLFLGFASMIRSSQNHENEPTPTTLPDRFIFFN 60
           MASPPDPSDISSALERLLLNRDVSL+APLFLGFASMIRSSQNHENEPTPTTLPDRFIFFN
Sbjct: 1   MASPPDPSDISSALERLLLNRDVSLIAPLFLGFASMIRSSQNHENEPTPTTLPDRFIFFN 60

Query: 61  PFSHQLMVVQATPKDGQPPASKASIKAMPSLPVSEVTECVICLDEIEVGGLAKQMPCNHK 120
           PFSHQLMVVQATPKDGQPPASKASIKAMPSLPVSEVTECVICLDEIEVGGLAKQMPCNHK
Sbjct: 61  PFSHQLMVVQATPKDGQPPASKASIKAMPSLPVSEVTECVICLDEIEVGGLAKQMPCNHK 120

Query: 121 FHGECIQKWLELHGSCPVCRYQMPIDGDDEGKKVGDEGTESRGETEIWVSFSFDHSIRNG 180
           FHGECIQKWLELHGSCPVCRYQMPIDGDDEGKKVGDEGTESRGETEIWVSFSFDHSIRNG
Sbjct: 121 FHGECIQKWLELHGSCPVCRYQMPIDGDDEGKKVGDEGTESRGETEIWVSFSFDHSIRNG 180

Query: 181 ESVQTPSTDSDHSYVQ 197
           ESVQTPSTDSDHSYVQ
Sbjct: 181 ESVQTPSTDSDHSYVQ 196

[Close]

BLAST of Cmc10g0267341 vs. ExPASy TrEMBL
Match: A0A0A0KU18 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G605210 PE=4 SV=1)

HSP 1 Score: 386.3 bits (991), Expect = 7.4e-104
Identity = 183/196 (93.37%), Postives = 191/196 (97.45%), Query Frame = 0


Query: 1   MASPPDPSDISSALERLLLNRDVSLVAPLFLGFASMIRSSQNHENEPTPTTLPDRFIFFN 60
           MASPPDPSD++SALERLLLNRDVSL+APLFLGFASM+RSSQN E++PTPTTLPDRFIFFN
Sbjct: 1   MASPPDPSDLASALERLLLNRDVSLIAPLFLGFASMVRSSQNQESDPTPTTLPDRFIFFN 60

Query: 61  PFSHQLMVVQATPKDGQPPASKASIKAMPSLPVSEVTECVICLDEIEVGGLAKQMPCNHK 120
           PFSHQLMVVQATPK GQPPASKASIKAMPSLPVSEVTECVICLDEIEVG LAKQMPCNHK
Sbjct: 61  PFSHQLMVVQATPKHGQPPASKASIKAMPSLPVSEVTECVICLDEIEVGRLAKQMPCNHK 120

Query: 121 FHGECIQKWLELHGSCPVCRYQMPIDGDDEGKKVGDEGTESRGETEIWVSFSFDHSIRNG 180
           FHG+CIQKWLELHGSCPVCRYQMPIDGDDEGKKVGDEG ESRGETEIWVSFSFDHSI NG
Sbjct: 121 FHGDCIQKWLELHGSCPVCRYQMPIDGDDEGKKVGDEGAESRGETEIWVSFSFDHSIGNG 180

Query: 181 ESVQTPSTDSDHSYVQ 197
           ESVQTPST+SDHSYVQ
Sbjct: 181 ESVQTPSTESDHSYVQ 196

[Close]

BLAST of Cmc10g0267341 vs. ExPASy TrEMBL
Match: A0A6J1GWR8 (E3 ubiquitin-protein ligase RING1-like OS=Cucurbita moschata OX=3662 GN=LOC111458226 PE=4 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 3.1e-78
Identity = 149/201 (74.13%), Postives = 171/201 (85.07%), Query Frame = 0


Query: 1   MASPPDPSDISSALERLL-LNRDVSLVAPLFLGFASMIRSSQNHENEP---TPTTLPDRF 60
           MAS P  S++SSA E L+ +NRD+S +APLFLGFAS+IRS+      P   T  TLP+RF
Sbjct: 1   MASDPVASELSSAFESLVFINRDISPIAPLFLGFASVIRSADPQSPNPEIQTIPTLPNRF 60

Query: 61  IFFNPFSHQLMVVQATPKDGQPPASKASIKAMPSLPVSEVTECVICLDEIEVGGLAKQMP 120
           IFFNPF  QLMV+QATPK+GQPPASKASIKAMPSLPVSE+TECVICL+EIE G LAKQMP
Sbjct: 61  IFFNPFPPQLMVIQATPKEGQPPASKASIKAMPSLPVSELTECVICLEEIEAGDLAKQMP 120

Query: 121 CNHKFHGECIQKWLELHGSCPVCRYQMPIDGDDEGKKVGDEGTESRGETEIWVSFSFDHS 180
           C+HKFHG+CI+KWLELHGSCP+CRYQMPID +DEGKKV +EG+E RGE EIWVSFSFD+ 
Sbjct: 121 CSHKFHGDCIEKWLELHGSCPICRYQMPIDDEDEGKKVDEEGSERRGEREIWVSFSFDNV 180

Query: 181 IRNGESVQT-PSTDSDHSYVQ 197
            RNGESVQT PST SDHS+VQ
Sbjct: 181 TRNGESVQTPPSTYSDHSFVQ 201

[Close]

BLAST of Cmc10g0267341 vs. ExPASy TrEMBL
Match: A0A6J1HTX2 (E3 ubiquitin-protein ligase RING1-like OS=Cucurbita maxima OX=3661 GN=LOC111467433 PE=4 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 3.8e-76
Identity = 145/201 (72.14%), Postives = 167/201 (83.08%), Query Frame = 0


Query: 1   MASPPDPSDISSALERLLLNRDVSLVAPLFLGFASMIRS----SQNHENEPTPTTLPDRF 60
           M S PDPS++SSALE L+LN DVSL+AP FLGFA+MI +    S N   E  P TLPDRF
Sbjct: 1   MPSEPDPSELSSALETLILNTDVSLLAPHFLGFATMIHTIAPQSPNQGIETNP-TLPDRF 60

Query: 61  IFFNPFSHQLMVVQATPKDGQPPASKASIKAMPSLPVSEVTECVICLDEIEVGGLAKQMP 120
           IFFNPF HQL+++Q+TPK+ QPPASKASI AMPS+ VS  TECVICLDEIEVGG+AK+MP
Sbjct: 61  IFFNPFLHQLIMIQSTPKNSQPPASKASIIAMPSVHVSAQTECVICLDEIEVGGVAKEMP 120

Query: 121 CNHKFHGECIQKWLELHGSCPVCRYQMPIDGD-DEGKKVGDEGTESRGETEIWVSFSFDH 180
           CNHKFHG+CI+KWLELHGSCPVCRY+MP+D D DEGKKV DEGTE  GE EIWVSFSFD+
Sbjct: 121 CNHKFHGDCIEKWLELHGSCPVCRYEMPVDDDEDEGKKVEDEGTERMGEREIWVSFSFDN 180

Query: 181 SIRNGESVQTPSTDSDHSYVQ 197
            + N +S+QTP  DSDHSYVQ
Sbjct: 181 PMGNQDSLQTPPIDSDHSYVQ 200

[Close]

BLAST of Cmc10g0267341 vs. TAIR 10
Match: AT1G26800.1 (RING/U-box superfamily protein )

HSP 1 Score: 146.0 bits (367), Expect = 3.2e-35
Identity = 78/185 (42.16%), Postives = 109/185 (58.92%), Query Frame = 0


Query: 8   SDISSALERLLLNRDVSLVAPLFLGFASMIRSSQNHENEPTPTTLPDRFIFFNPFSHQLM 67
           ++ SS   R L NRD+ L  P  LGF+   + S N +++   ++  +R I  NPF+  ++
Sbjct: 11  TETSSVSGRFLRNRDLYLFLPFLLGFSD--QESSNGDDDDVASS-RERIILVNPFTQGMI 70

Query: 68  VVQATP-------------KDGQPPASKASIKAMPSLPVSEVT-ECVICLDEIEVGGLAK 127
           V++ +              ++G+PPASKASI AMP + +     ECVICL+E +     K
Sbjct: 71  VLEGSSGMNPLLRSLLESREEGRPPASKASIDAMPIVEIDGCEGECVICLEEWKSEETVK 130

Query: 128 QMPCNHKFHGECIQKWLELHGSCPVCRYQMPIDGDDEGKKVGDEGTESRGETEIWVSFSF 179
           +MPC H+FHG CI+KWL  HGSCPVCRY+MP+DGD+ GKK  D         EIWV FSF
Sbjct: 131 EMPCKHRFHGGCIEKWLGFHGSCPVCRYEMPVDGDEIGKKRND-------GNEIWVRFSF 185

[Close]

BLAST of Cmc10g0267341 vs. TAIR 10
Match: AT5G56340.1 (RING/U-box superfamily protein )

HSP 1 Score: 110.5 bits (275), Expect = 1.5e-24
Identity = 52/125 (41.60%), Postives = 78/125 (62.40%), Query Frame = 0


Query: 35  SMIRSSQNHENEPTPTTLPDRFIFFNPFSHQLM--VVQATP-KDGQPPASKASIKAMPSL 94
           S++  S  ++N P+ T+L D FI   P    L+  + +  P + G PPA K +++A+P++
Sbjct: 194 SLVVPSDQNQNHPSLTSLGDYFI--GPGLDLLLQHLAENDPNRQGTPPARKEAVEALPTV 253

Query: 95  PVSEVTECVICLDEIEVGGLAKQMPCNHKFHGECIQKWLELHGSCPVCRYQMPIDGDDEG 154
            + E  +C +CLD+ E G  AK+MPC HKFH  CI  WLELH SCPVCR+++P   DD+ 
Sbjct: 254 KIMEPLQCSVCLDDFEKGTEAKEMPCKHKFHVRCIVPWLELHSSCPVCRFELPSSADDDD 313

Query: 155 KKVGD 157
           +   D
Sbjct: 314 ETKTD 316

[Close]

BLAST of Cmc10g0267341 vs. TAIR 10
Match: AT3G19950.1 (RING/U-box superfamily protein )

HSP 1 Score: 108.2 bits (269), Expect = 7.5e-24
Identity = 58/140 (41.43%), Postives = 82/140 (58.57%), Query Frame = 0


Query: 41  QNHENEPTPTTLPDRF--IFFNPFSHQLMVVQATPKD----GQPPASKASIKAMPSLPV- 100
           +NH ++P    +P  F   FF P   QL + Q    D    G PPASK++I A+P++ V 
Sbjct: 148 ENHPSDP-GNRMPGNFGDYFFGPGLEQL-IQQLAENDPNRYGTPPASKSAIDALPTVKVT 207

Query: 101 -----SEVTECVICLDEIEVGGLAKQMPCNHKFHGECIQKWLELHGSCPVCRYQMPIDGD 160
                SE+ +C +C+DE E G   KQMPC H FH +C+  WLELH SCPVCR+++P D  
Sbjct: 208 KDMLKSEMNQCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLELHNSCPVCRFELPTDDP 267

Query: 161 D-EGKKVGDEGT-ESRGETE 167
           D E +  G +G+ + +G  E
Sbjct: 268 DYENRSQGSQGSGDGQGSVE 285

[Close]

BLAST of Cmc10g0267341 vs. TAIR 10
Match: AT1G14200.1 (RING/U-box superfamily protein )

HSP 1 Score: 106.7 bits (265), Expect = 2.2e-23
Identity = 61/184 (33.15%), Postives = 90/184 (48.91%), Query Frame = 0


Query: 1   MASPPDPSDISSALERLLLNRDVSLVAPLFLGFASMIRSSQNHENEPTPTT-----LPDR 60
           M+S  D  + SS  ER++  R   L   L +  A   R   + +     TT     L  R
Sbjct: 1   MSSENDFVEFSSMFERIIQGRGDGLSRFLPVIVALAAREDDDDQGSTDQTTRRGDPLSPR 60

Query: 61  FIFFNPFSHQLMVVQATPKDGQPPASKASIKAMPSLPVSEVTE-----CVICLDEIEVGG 120
           F+     S          K G+ PA K+ ++ MP + + E  E     C ICLDE   G 
Sbjct: 61  FVMIGSRSGLDDFFSDGGKQGRSPALKSEVENMPRVVIGEDKEKYGGSCAICLDEWSKGD 120

Query: 121 LAKQMPCNHKFHGECIQKWLELHGSCPVCRYQMPIDGDDEGKKVGDEGTESRGETEIWVS 175
           +A +MPC HKFH +C+++WL  H +CP+CRY+MP++  +E KK+G           IW+ 
Sbjct: 121 VAAEMPCKHKFHSKCVEEWLGRHATCPMCRYEMPVEEVEEEKKIG-----------IWIG 173

[Close]

BLAST of Cmc10g0267341 vs. TAIR 10
Match: AT1G55530.1 (RING/U-box superfamily protein )

HSP 1 Score: 101.7 bits (252), Expect = 7.0e-22
Identity = 38/71 (53.52%), Postives = 52/71 (73.24%), Query Frame = 0


Query: 76  GQPPASKASIKAMPSLPVSEVTECVICLDEIEVGGLAKQMPCNHKFHGECIQKWLELHGS 135
           G PPA K +++A+ ++ + E  +C +CLD+ E+G  AK MPC HKFH +C+  WLELH S
Sbjct: 200 GTPPAKKEAVEALATVKIEETLQCSVCLDDFEIGTEAKLMPCTHKFHSDCLLPWLELHSS 259

Query: 136 CPVCRYQMPID 147
           CPVCRYQ+P D
Sbjct: 260 CPVCRYQLPAD 270

The following BLAST results are available for this feature:

BLAST of Cmc10g0267341 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008446365.1	4.9e-110	99.49	PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis melo] >KAA0034425.1 E...	[more]
XP_011655684.1	1.5e-103	93.37	E3 ubiquitin-protein ligase MPSR1 [Cucumis sativus] >KGN51927.1 hypothetical pro...	[more]
XP_038891708.1	1.4e-96	86.73	E3 ubiquitin-protein ligase MPSR1-like [Benincasa hispida]	[more]
KAG6601438.1	3.8e-78	74.13	E3 ubiquitin-protein ligase MPSR1, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023547759.1	3.8e-78	73.63	E3 ubiquitin-protein ligase RING1-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cmc10g0267341 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LQX2	4.6e-34	42.16	E3 ubiquitin-protein ligase MPSR1 OS=Arabidopsis thaliana OX=3702 GN=MPSR1 PE=1 ...	[more]
Q8LPN7	1.1e-22	41.43	E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19...	[more]
Q6AVN2	3.1e-22	48.35	E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp. japonica OX=39947 GN=SI...	[more]
P0CH30	1.3e-20	39.26	E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV...	[more]
O22197	6.6e-17	42.11	Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana OX=3702 GN=RH...	[more]

BLAST of Cmc10g0267341 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3D3N1	2.4e-110	99.49	E3 ubiquitin-protein ligase RING1-like OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S3BFQ2	2.4e-110	99.49	E3 ubiquitin-protein ligase RING1-like OS=Cucumis melo OX=3656 GN=LOC103489128 P...	[more]
A0A0A0KU18	7.4e-104	93.37	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G605210 P...	[more]
A0A6J1GWR8	3.1e-78	74.13	E3 ubiquitin-protein ligase RING1-like OS=Cucurbita moschata OX=3662 GN=LOC11145...	[more]
A0A6J1HTX2	3.8e-76	72.14	E3 ubiquitin-protein ligase RING1-like OS=Cucurbita maxima OX=3661 GN=LOC1114674...	[more]

BLAST of Cmc10g0267341 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G26800.1	3.2e-35	42.16	RING/U-box superfamily protein	[more]
AT5G56340.1	1.5e-24	41.60	RING/U-box superfamily protein	[more]
AT3G19950.1	7.5e-24	41.43	RING/U-box superfamily protein	[more]
AT1G14200.1	2.2e-23	33.15	RING/U-box superfamily protein	[more]
AT1G55530.1	7.0e-22	53.52	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 99..139 e-value: 6.0E-8 score: 42.4
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 98..140 e-value: 5.1E-14 score: 52.3
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 99..140 score: 12.666314
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 67..146 e-value: 7.2E-21 score: 75.7
None	No IPR available	PANTHER	PTHR15710	E3 UBIQUITIN-PROTEIN LIGASE PRAJA	coord: 54..176
None	No IPR available	PANTHER	PTHR15710:SF100	RING/U-BOX SUPERFAMILY PROTEIN-RELATED	coord: 54..176
None	No IPR available	CDD	cd16454	RING-H2_PA-TM-RING	coord: 98..140 e-value: 7.96772E-19 score: 73.8753
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 98..146

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc10g0267341.1	Cmc10g0267341.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0061630	ubiquitin protein ligase activity