Cmc09g0260781 (gene) Melon (Charmono) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGAATCTAGAAAAGTTGGATAGGGACAAGCAGGATCATATAATATGAGAACTATGAGGAGATAAATGGGACAATCCAAAAGGAAAAGAAGATACATTGAACCTAGACAGGCAAATGGTGGGTTTTAAGGAGAAGAAGAAAAGGGAGAGAGGGCATTCTGAAATCTGAAGTTGGAGAAAATGGGAGTACTGAAATCGGGTGGTGTTGAGTCGGTAAGCCTGGGGAGGAGGAATGAGGAGCTGGAGAAGGAATTGGAGGCGAGCCAGGAAAGAGAGCTGGTTATGAGGGAGGAGCTCAGAAGGGTTTGTGAAAGGCTAAAGGTGGCAGAGGAGGCGGAGGAGAGGCTTTCGTTACAGCTTGGGGAGCTCGAGGCAGAAGCTCTAACCCAGGCACGTGATTACCACCAACAAATCACATCGTTGATGAACCAGCTCTCCCACGCTCATAAACTGCTGCAAGCTGCCTCCATCGCCTCCTTTACTTAGAACACAAACTTAACCCGATATGTTGGAGGCCCTTTTTCCCCTCCTTCAGTACTTCATCGAGTCGATGTAATTCAATCTCTTACTACCAAATCCAATAGTTGTATCACTTTTCCGCTGCTTAAAACTTTTGATTGATTCAGGCAAACAAAATTCAATGATAAAATGTATTGAGTTTTTTGTTCCGGTAATTTGAAGTCTAAACTTCAGCTCTTCTATTCTTTCTTTCTTTC GGAATCTAGAAAAGTTGGATAGGGACAAGCAGGATCATATAATATGAGAACTATGAGGAGATAAATGGGACAATCCAAAAGGAAAAGAAGATACATTGAACCTAGACAGGCAAATGGTGGGTTTTAAGGAGAAGAAGAAAAGGGAGAGAGGGCATTCTGAAATCTGAAGTTGGAGAAAATGGGAGTACTGAAATCGGGTGGTGTTGAGTCGGTAAGCCTGGGGAGGAGGAATGAGGAGCTGGAGAAGGAATTGGAGGCGAGCCAGGAAAGAGAGCTGGTTATGAGGGAGGAGCTCAGAAGGGTTTGTGAAAGGCTAAAGGTGGCAGAGGAGGCGGAGGAGAGGCTTTCGTTACAGCTTGGGGAGCTCGAGGCAGAAGCTCTAACCCAGGCACGTGATTACCACCAACAAATCACATCGTTGATGAACCAGCTCTCCCACGCTCATAAACTGCTGCAAGCTGCCTCCATCGCCTCCTTTACTTAGAACACAAACTTAACCCGATATGTTGGAGGCCCTTTTTCCCCTCCTTCAGTACTTCATCGAGTCGATGTAATTCAATCTCTTACTACCAAATCCAATAGTTGTATCACTTTTCCGCTGCTTAAAACTTTTGATTGATTCAGGCAAACAAAATTCAATGATAAAATGTATTGAGTTTTTTGTTCCGGTAATTTGAAGTCTAAACTTCAGCTCTTCTATTCTTTCTTTCTTTC ATGGGAGTACTGAAATCGGGTGGTGTTGAGTCGGTAAGCCTGGGGAGGAGGAATGAGGAGCTGGAGAAGGAATTGGAGGCGAGCCAGGAAAGAGAGCTGGTTATGAGGGAGGAGCTCAGAAGGGTTTGTGAAAGGCTAAAGGTGGCAGAGGAGGCGGAGGAGAGGCTTTCGTTACAGCTTGGGGAGCTCGAGGCAGAAGCTCTAACCCAGGCACGTGATTACCACCAACAAATCACATCGTTGATGAACCAGCTCTCCCACGCTCATAAACTGCTGCAAGCTGCCTCCATCGCCTCCTTTACTTAG MGVLKSGGVESVSLGRRNEELEKELEASQERELVMREELRRVCERLKVAEEAEERLSLQLGELEAEALTQARDYHQQITSLMNQLSHAHKLLQAASIASFT Homology
BLAST of Cmc09g0260781 vs. NCBI nr
Match: XP_008437659.1 (PREDICTED: uncharacterized protein LOC103482998 [Cucumis melo] >KAA0042521.1 ribonuclease Y-like [Cucumis melo var. makuwa] >TYK05924.1 ribonuclease Y-like [Cucumis melo var. makuwa]) HSP 1 Score: 179.9 bits (455), Expect = 1.1e-41 Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0
BLAST of Cmc09g0260781 vs. NCBI nr
Match: XP_011654590.1 (protein RESPONSE TO LOW SULFUR 2 [Cucumis sativus] >KGN49827.1 hypothetical protein Csa_000140 [Cucumis sativus]) HSP 1 Score: 171.0 bits (432), Expect = 5.2e-39 Identity = 96/101 (95.05%), Postives = 98/101 (97.03%), Query Frame = 0
BLAST of Cmc09g0260781 vs. NCBI nr
Match: XP_038875209.1 (protein RESPONSE TO LOW SULFUR 2-like [Benincasa hispida]) HSP 1 Score: 152.9 bits (385), Expect = 1.5e-33 Identity = 87/96 (90.62%), Postives = 90/96 (93.75%), Query Frame = 0
BLAST of Cmc09g0260781 vs. NCBI nr
Match: KAG6605817.1 (Protein RESPONSE TO LOW SULFUR 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035779.1 Protein RESPONSE TO LOW SULFUR 2, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 118.6 bits (296), Expect = 3.1e-23 Identity = 69/96 (71.88%), Postives = 80/96 (83.33%), Query Frame = 0
BLAST of Cmc09g0260781 vs. NCBI nr
Match: XP_022957699.1 (uncharacterized protein LOC111459164 [Cucurbita moschata]) HSP 1 Score: 118.6 bits (296), Expect = 3.1e-23 Identity = 69/96 (71.88%), Postives = 80/96 (83.33%), Query Frame = 0
BLAST of Cmc09g0260781 vs. ExPASy Swiss-Prot
Match: Q9FIR9 (Protein RESPONSE TO LOW SULFUR 2 OS=Arabidopsis thaliana OX=3702 GN=LSU2 PE=1 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 7.6e-09 Identity = 39/73 (53.42%), Postives = 51/73 (69.86%), Query Frame = 0
BLAST of Cmc09g0260781 vs. ExPASy Swiss-Prot
Match: Q9SCK2 (Protein RESPONSE TO LOW SULFUR 3 OS=Arabidopsis thaliana OX=3702 GN=LSU3 PE=4 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 9.9e-09 Identity = 43/88 (48.86%), Postives = 56/88 (63.64%), Query Frame = 0
BLAST of Cmc09g0260781 vs. ExPASy Swiss-Prot
Match: Q8L8S2 (Protein RESPONSE TO LOW SULFUR 4 OS=Arabidopsis thaliana OX=3702 GN=LSU4 PE=2 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 1.1e-07 Identity = 39/77 (50.65%), Postives = 50/77 (64.94%), Query Frame = 0
BLAST of Cmc09g0260781 vs. ExPASy Swiss-Prot
Match: Q9SCK1 (Protein RESPONSE TO LOW SULFUR 1 OS=Arabidopsis thaliana OX=3702 GN=LSU1 PE=1 SV=1) HSP 1 Score: 52.8 bits (125), Expect = 2.7e-06 Identity = 40/98 (40.82%), Postives = 57/98 (58.16%), Query Frame = 0
BLAST of Cmc09g0260781 vs. ExPASy TrEMBL
Match: A0A5A7TLR6 (Ribonuclease Y-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G00160 PE=4 SV=1) HSP 1 Score: 179.9 bits (455), Expect = 5.4e-42 Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0
BLAST of Cmc09g0260781 vs. ExPASy TrEMBL
Match: A0A1S3AV51 (uncharacterized protein LOC103482998 OS=Cucumis melo OX=3656 GN=LOC103482998 PE=4 SV=1) HSP 1 Score: 179.9 bits (455), Expect = 5.4e-42 Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0
BLAST of Cmc09g0260781 vs. ExPASy TrEMBL
Match: A0A0A0KN32 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139070 PE=4 SV=1) HSP 1 Score: 171.0 bits (432), Expect = 2.5e-39 Identity = 96/101 (95.05%), Postives = 98/101 (97.03%), Query Frame = 0
BLAST of Cmc09g0260781 vs. ExPASy TrEMBL
Match: A0A6J1H2Q6 (uncharacterized protein LOC111459164 OS=Cucurbita moschata OX=3662 GN=LOC111459164 PE=4 SV=1) HSP 1 Score: 118.6 bits (296), Expect = 1.5e-23 Identity = 69/96 (71.88%), Postives = 80/96 (83.33%), Query Frame = 0
BLAST of Cmc09g0260781 vs. ExPASy TrEMBL
Match: A0A6J1K1F9 (protein RESPONSE TO LOW SULFUR 2-like OS=Cucurbita maxima OX=3661 GN=LOC111491545 PE=4 SV=1) HSP 1 Score: 117.5 bits (293), Expect = 3.3e-23 Identity = 68/96 (70.83%), Postives = 80/96 (83.33%), Query Frame = 0
BLAST of Cmc09g0260781 vs. TAIR 10
Match: AT5G24660.1 (response to low sulfur 2 ) HSP 1 Score: 61.2 bits (147), Expect = 5.4e-10 Identity = 39/73 (53.42%), Postives = 51/73 (69.86%), Query Frame = 0
BLAST of Cmc09g0260781 vs. TAIR 10
Match: AT3G49570.1 (response to low sulfur 3 ) HSP 1 Score: 60.8 bits (146), Expect = 7.1e-10 Identity = 43/88 (48.86%), Postives = 56/88 (63.64%), Query Frame = 0
BLAST of Cmc09g0260781 vs. TAIR 10
Match: AT5G24655.1 (response to low sulfur 4 ) HSP 1 Score: 57.4 bits (137), Expect = 7.8e-09 Identity = 39/77 (50.65%), Postives = 50/77 (64.94%), Query Frame = 0
BLAST of Cmc09g0260781 vs. TAIR 10
Match: AT3G49580.1 (response to low sulfur 1 ) HSP 1 Score: 52.8 bits (125), Expect = 1.9e-07 Identity = 40/98 (40.82%), Postives = 57/98 (58.16%), Query Frame = 0
BLAST of Cmc09g0260781 vs. TAIR 10
Match: AT3G49580.2 (response to low sulfur 1 ) HSP 1 Score: 42.4 bits (98), Expect = 2.6e-04 Identity = 31/63 (49.21%), Postives = 41/63 (65.08%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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