Cmc09g0254661 (gene) Melon (Charmono) v1.1

Overview
NameCmc09g0254661
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionUnknown protein
LocationCMiso1.1chr09: 20370060 .. 20370580 (-)
RNA-Seq ExpressionCmc09g0254661
SyntenyCmc09g0254661
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCTCAAGAGATTAACACAATGGGTTCTTATAAGAAGCACTTAATATTTTTAGCAACTCTCTTGTATCTCATGCTTTTCCTTTCAACCTATGGAGCAGCAAGAATCTTGGATCCAAATGGTACATTTTCTCACCATTTTTATTTTTAATTATTTTTTCTTTTGCTAGCGAACCAAGATCTATGAAAAAGTTTATAATTTTAAGTTTTGAAATGAACTTTTTCAGGAAATATGAATAAGGTCCAAGAAATAAAGATGATTGTAGTAGGACGAATTGTACGACGAGATTTGGCACATGGAGGAAACTATGGCCCAGGACTTCAGTGAGATGATGTTATAAACTAATTTTCTTCGAGTTTCTTTCTTTTTTAATAACTAACTTGAATGTAGCGTTCTGGTTTGAAACTTCTTCTTTCTTTTCAAGTACTAATGATTTTAAAGAAGAAAAATAATAAGCATATTATGTATATATACTAGAATGGATGATTAGTACTTCTTTGTTTGTTTTGAAATATATGATGTTA

mRNA sequence

TCTCAAGAGATTAACACAATGGGTTCTTATAAGAAGCACTTAATATTTTTAGCAACTCTCTTGTATCTCATGCTTTTCCTTTCAACCTATGGAGCAGCAAGAATCTTGGATCCAAATGGAAATATGAATAAGGTCCAAGAAATAAAGATGATTGTAGTAGGACGAATTGTACGACGAGATTTGGCACATGGAGGAAACTATGGCCCAGGACTTCAGTGAGATGATGTTATAAACTAATTTTCTTCGAGTTTCTTTCTTTTTTAATAACTAACTTGAATGTAGCGTTCTGGTTTGAAACTTCTTCTTTCTTTTCAAGTACTAATGATTTTAAAGAAGAAAAATAATAAGCATATTATGTATATATACTAGAATGGATGATTAGTACTTCTTTGTTTGTTTTGAAATATATGATGTTA

Coding sequence (CDS)

ATGGGTTCTTATAAGAAGCACTTAATATTTTTAGCAACTCTCTTGTATCTCATGCTTTTCCTTTCAACCTATGGAGCAGCAAGAATCTTGGATCCAAATGGAAATATGAATAAGGTCCAAGAAATAAAGATGATTGTAGTAGGACGAATTGTACGACGAGATTTGGCACATGGAGGAAACTATGGCCCAGGACTTCAGTGA

Protein sequence

MGSYKKHLIFLATLLYLMLFLSTYGAARILDPNGNMNKVQEIKMIVVGRIVRRDLAHGGNYGPGLQ
Homology
[Close]
BLAST of Cmc09g0254661 vs. NCBI nr
Match: KGN50358.1 (hypothetical protein Csa_000417 [Cucumis sativus])

HSP 1 Score: 109.0 bits (271), Expect = 1.6e-20
Identity = 58/67 (86.57%), Postives = 62/67 (92.54%), Query Frame = 0 

Query: 1  MGSYKKHLIFLATLLYLMLFLSTYGAARILDPNGNMNKVQEIKMIVVG-RIVRRDLAHGG 60
          M SYKKHLI LATLLYLMLFLSTYGAARILD NG+M KV+EIK+IVVG RIVRRDLAHGG
Sbjct: 4  MASYKKHLIILATLLYLMLFLSTYGAARILDLNGSM-KVREIKVIVVGRRIVRRDLAHGG 63

Query: 61 NYGPGLQ 67
          NYGPG+Q
Sbjct: 64 NYGPGVQ 69

[Close]
BLAST of Cmc09g0254661 vs. NCBI nr
Match: KAG6605659.1 (hypothetical protein SDJN03_02976, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 88.6 bits (218), Expect = 2.2e-14
Identity = 45/66 (68.18%), Postives = 53/66 (80.30%), Query Frame = 0 

Query: 1  MGSYKKHLIFLATLLYLMLFLSTYGAARILDPNGNMNKVQEIKMIVVGRIVRRDLAHGGN 60
          MGS KKHLI L  +LYLMLFLS+YGAAR+  PNG+MN   E+K I +GRI+RRDLA+GGN
Sbjct: 1  MGSNKKHLIPLVIVLYLMLFLSSYGAARVFIPNGHMNAF-EMKPITLGRIMRRDLAYGGN 60

Query: 61 YGPGLQ 67
          Y PG Q
Sbjct: 61 YSPGKQ 65

[Close]
BLAST of Cmc09g0254661 vs. NCBI nr
Match: KAG7035570.1 (hypothetical protein SDJN02_02367, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 88.6 bits (218), Expect = 2.2e-14
Identity = 45/66 (68.18%), Postives = 53/66 (80.30%), Query Frame = 0 

Query: 1  MGSYKKHLIFLATLLYLMLFLSTYGAARILDPNGNMNKVQEIKMIVVGRIVRRDLAHGGN 60
          MGS KKHLI L  +LYLMLFLS+YGAAR+  PNG+MN   E+K I +GRI+RRDLA+GGN
Sbjct: 1  MGSNKKHLIPLVIVLYLMLFLSSYGAARVFIPNGHMNAF-EMKPITLGRIMRRDLAYGGN 60

Query: 61 YGPGLQ 67
          Y PG Q
Sbjct: 61 YSPGKQ 65

[Close]
BLAST of Cmc09g0254661 vs. ExPASy TrEMBL
Match: A0A0A0KL54 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G168950 PE=4 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 7.7e-21
Identity = 58/67 (86.57%), Postives = 62/67 (92.54%), Query Frame = 0 

Query: 1  MGSYKKHLIFLATLLYLMLFLSTYGAARILDPNGNMNKVQEIKMIVVG-RIVRRDLAHGG 60
          M SYKKHLI LATLLYLMLFLSTYGAARILD NG+M KV+EIK+IVVG RIVRRDLAHGG
Sbjct: 4  MASYKKHLIILATLLYLMLFLSTYGAARILDLNGSM-KVREIKVIVVGRRIVRRDLAHGG 63

Query: 61 NYGPGLQ 67
          NYGPG+Q
Sbjct: 64 NYGPGVQ 69

The following BLAST results are available for this feature:
BLAST of Cmc09g0254661 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN50358.11.6e-2086.57hypothetical protein Csa_000417 [Cucumis sativus][more]
KAG6605659.12.2e-1468.18hypothetical protein SDJN03_02976, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG7035570.12.2e-1468.18hypothetical protein SDJN02_02367, partial [Cucurbita argyrosperma subsp. argyro... [more]
BLAST of Cmc09g0254661 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Cmc09g0254661 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KL547.7e-2186.57Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G168950 PE=4 SV=1[more]
BLAST of Cmc09g0254661 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc09g0254661.1Cmc09g0254661.1mRNA