Cmc09g0251641 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc09g0251641
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Retrotransposon protein
Location	CMiso1.1chr09: 17697866 .. 17698387 (-)
RNA-Seq Expression	Cmc09g0251641
Synteny	Cmc09g0251641

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTAGCAATGTTCTTGCACGTTCTCGCTCATGACGTGAAGAACCGCGTCATACAACGAGAATTTGTACGCTCCGGTGAGACAGTATCTCGACATTTCAACATCGTATTGTTGGCTGTTCTTCGACTGTACGAGGAGTTGATAAAGAGACCTGTTCCGGTAACAAGTAACTGCAATGATCAACGTTGGAAGTGTTTCGAGGTGGGCATCATAGAAGTTCACTATAATTGACCTTTAGGTACATCGCAGTTAATTCATCGTGTTTCTTTCAACCTGCAGAACTGCCTTGGCGCGTTAGACGGGACGTACATAAAGGTCAACGTCCCCGCAGGAGATCGGCCTACTTTCAGAATGTGTAAGGGGGAAATTGCCACAAACGTTCTTGGGGTCTGTGACACGAAAGGGGATTTCGTTTATGTCCTCGCCGGTTGGGAAGGATCTGCAGCAGACTCGCGGATCCTACGTGATGCGATTTCACGAGAAAATGGACTACAAGTGCCAAAGGGTATATCTTCTTTATAG

mRNA sequence

ATGGTAGCAATGTTCTTGCACGTTCTCGCTCATGACGTGAAGAACCGCGTCATACAACGAGAATTTGTACGCTCCGGTGAGACAGTATCTCGACATTTCAACATCGTATTGTTGGCTGTTCTTCGACTGTACGAGGAGTTGATAAAGAGACCTGTTCCGAACTGCCTTGGCGCGTTAGACGGGACGTACATAAAGGTCAACGTCCCCGCAGGAGATCGGCCTACTTTCAGAATGTGTAAGGGGGAAATTGCCACAAACGTTCTTGGGGTCTGTGACACGAAAGGGGATTTCGTTTATGTCCTCGCCGGTTGGGAAGGATCTGCAGCAGACTCGCGGATCCTACGTGATGCGATTTCACGAGAAAATGGACTACAAGTGCCAAAGGGTATATCTTCTTTATAG

Coding sequence (CDS)

ATGGTAGCAATGTTCTTGCACGTTCTCGCTCATGACGTGAAGAACCGCGTCATACAACGAGAATTTGTACGCTCCGGTGAGACAGTATCTCGACATTTCAACATCGTATTGTTGGCTGTTCTTCGACTGTACGAGGAGTTGATAAAGAGACCTGTTCCGAACTGCCTTGGCGCGTTAGACGGGACGTACATAAAGGTCAACGTCCCCGCAGGAGATCGGCCTACTTTCAGAATGTGTAAGGGGGAAATTGCCACAAACGTTCTTGGGGTCTGTGACACGAAAGGGGATTTCGTTTATGTCCTCGCCGGTTGGGAAGGATCTGCAGCAGACTCGCGGATCCTACGTGATGCGATTTCACGAGAAAATGGACTACAAGTGCCAAAGGGTATATCTTCTTTATAG

Protein sequence

MVAMFLHVLAHDVKNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPVPNCLGALDGTYIKVNVPAGDRPTFRMCKGEIATNVLGVCDTKGDFVYVLAGWEGSAADSRILRDAISRENGLQVPKGISSL

Homology

[Close]

BLAST of Cmc09g0251641 vs. NCBI nr
Match: KAA0067584.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 256.9 bits (655), Expect = 9.5e-65
Identity = 130/145 (89.66%), Postives = 131/145 (90.34%), Query Frame = 0


Query: 1   MVAMFLHVLAHDVKNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPVP------- 60
           MVAMFLHVLAHDVKNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPVP       
Sbjct: 1   MVAMFLHVLAHDVKNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPVPVTSNCND 60

Query: 61  -------NCLGALDGTYIKVNVPAGDRPTFRMCKGEIATNVLGVCDTKGDFVYVLAGWEG 120
                  NCLGALDGTYIKVNVPAGDRPTFRMCKGEIATNVLGVCDTKGDFVYVLAGWEG
Sbjct: 61  QRWKCFENCLGALDGTYIKVNVPAGDRPTFRMCKGEIATNVLGVCDTKGDFVYVLAGWEG 120

Query: 121 SAADSRILRDAISRENGLQVPKGIS 132
           SAADSRILRDAISRENGLQVPKG+S
Sbjct: 121 SAADSRILRDAISRENGLQVPKGVS 145

[Close]

BLAST of Cmc09g0251641 vs. NCBI nr
Match: TYK19867.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 256.1 bits (653), Expect = 1.6e-64
Identity = 124/133 (93.23%), Postives = 130/133 (97.74%), Query Frame = 0


Query: 1   MVAMFLHVLAHDVKNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPVPNCLGALD 60
           ++AMFLHVLAHDVKNRVIQREFVRSG+T+SRHFNIVLLA+LRLYEELIKRPVPNCLGALD
Sbjct: 13  VLAMFLHVLAHDVKNRVIQREFVRSGKTISRHFNIVLLAILRLYEELIKRPVPNCLGALD 72

Query: 61  GTYIKVNVPAGDRPTFRMCKGEIATNVLGVCDTKGDFVYVLAGWEGSAADSRILRDAISR 120
           GTYIKVNVPAGDRPTFR CKGEIATNVLGVCDTKGDFVYVLA WEG AADSRILRDA+SR
Sbjct: 73  GTYIKVNVPAGDRPTFRTCKGEIATNVLGVCDTKGDFVYVLACWEGYAADSRILRDALSR 132

Query: 121 ENGLQVPKGISSL 134
           ENGLQVPKGISSL
Sbjct: 133 ENGLQVPKGISSL 145

[Close]

BLAST of Cmc09g0251641 vs. NCBI nr
Match: KAA0051443.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 255.4 bits (651), Expect = 2.8e-64
Identity = 126/129 (97.67%), Postives = 126/129 (97.67%), Query Frame = 0


Query: 1   MVAMFLHVLAHDVKNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPVPNCLGALD 60
           MVAMFLHVLAHDVKNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPVPNCLGALD
Sbjct: 69  MVAMFLHVLAHDVKNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPVPNCLGALD 128

Query: 61  GTYIKVNVPAGDRPTFRMCKGEIATNVLGVCDTKGDFVYVLAGWEGSAADSRILRDAISR 120
           GTYIKVNVP GDRPTFR  KGEIATNVLGVCDTKGDFVYVLAGWEGSAADSRILRDAISR
Sbjct: 129 GTYIKVNVPTGDRPTFRTRKGEIATNVLGVCDTKGDFVYVLAGWEGSAADSRILRDAISR 188

Query: 121 ENGLQVPKG 130
           ENGLQVPKG
Sbjct: 189 ENGLQVPKG 197

[Close]

BLAST of Cmc09g0251641 vs. NCBI nr
Match: KAA0062587.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 255.4 bits (651), Expect = 2.8e-64
Identity = 126/129 (97.67%), Postives = 127/129 (98.45%), Query Frame = 0


Query: 1   MVAMFLHVLAHDVKNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPVPNCLGALD 60
           MVAMFLHVLAHDVKNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPVPNCLGALD
Sbjct: 69  MVAMFLHVLAHDVKNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPVPNCLGALD 128

Query: 61  GTYIKVNVPAGDRPTFRMCKGEIATNVLGVCDTKGDFVYVLAGWEGSAADSRILRDAISR 120
           GTYIKVNVPAGDRPTFR  KGEIATNVLGVCDTKGDFVYVLAGWEGSAADS+ILRDAISR
Sbjct: 129 GTYIKVNVPAGDRPTFRTRKGEIATNVLGVCDTKGDFVYVLAGWEGSAADSQILRDAISR 188

Query: 121 ENGLQVPKG 130
           ENGLQVPKG
Sbjct: 189 ENGLQVPKG 197

[Close]

BLAST of Cmc09g0251641 vs. NCBI nr
Match: KAA0036923.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 254.2 bits (648), Expect = 6.1e-64
Identity = 125/129 (96.90%), Postives = 127/129 (98.45%), Query Frame = 0


Query: 1   MVAMFLHVLAHDVKNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPVPNCLGALD 60
           MVAMFLHVLAHDVKNRVIQREFVRSGETVSRHFNIVLLAVLRLYEEL+KRPVPNCLGALD
Sbjct: 69  MVAMFLHVLAHDVKNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELMKRPVPNCLGALD 128

Query: 61  GTYIKVNVPAGDRPTFRMCKGEIATNVLGVCDTKGDFVYVLAGWEGSAADSRILRDAISR 120
           GTYIKVNVPAGDRPTFR  KGEIATNVLGVCDTKGDFVYVLAGWEGSAADSRILRDAIS+
Sbjct: 129 GTYIKVNVPAGDRPTFRTRKGEIATNVLGVCDTKGDFVYVLAGWEGSAADSRILRDAISQ 188

Query: 121 ENGLQVPKG 130
           ENGLQVPKG
Sbjct: 189 ENGLQVPKG 197

[Close]

BLAST of Cmc09g0251641 vs. ExPASy Swiss-Prot
Match: Q9M2U3 (Protein ALP1-like OS=Arabidopsis thaliana OX=3702 GN=At3g55350 PE=2 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 2.6e-04
Identity = 24/68 (35.29%), Postives = 38/68 (55.88%), Query Frame = 0


Query: 52  VPNCLGALDGTYIKVNVPAGDRPTFRMCKGE--IATNVLGVCDTKGDFVYVLAGWEGSAA 111
           +PNC GA+D T+I +N+PA +        GE   +  +  V D    F+ V+AGW GS  
Sbjct: 180 LPNCCGAIDITHIVMNLPAVEPSNKVWLDGEKNFSMTLQAVVDPDMRFLDVIAGWPGSLN 239

Query: 112 DSRILRDA 118
           D  +L+++
Sbjct: 240 DDVVLKNS 247

[Close]

BLAST of Cmc09g0251641 vs. ExPASy TrEMBL
Match: A0A5A7VJQ1 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold485G00490 PE=3 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 4.6e-65
Identity = 130/145 (89.66%), Postives = 131/145 (90.34%), Query Frame = 0


Query: 1   MVAMFLHVLAHDVKNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPVP------- 60
           MVAMFLHVLAHDVKNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPVP       
Sbjct: 1   MVAMFLHVLAHDVKNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPVPVTSNCND 60

Query: 61  -------NCLGALDGTYIKVNVPAGDRPTFRMCKGEIATNVLGVCDTKGDFVYVLAGWEG 120
                  NCLGALDGTYIKVNVPAGDRPTFRMCKGEIATNVLGVCDTKGDFVYVLAGWEG
Sbjct: 61  QRWKCFENCLGALDGTYIKVNVPAGDRPTFRMCKGEIATNVLGVCDTKGDFVYVLAGWEG 120

Query: 121 SAADSRILRDAISRENGLQVPKGIS 132
           SAADSRILRDAISRENGLQVPKG+S
Sbjct: 121 SAADSRILRDAISRENGLQVPKGVS 145

[Close]

BLAST of Cmc09g0251641 vs. ExPASy TrEMBL
Match: A0A5D3D8H2 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold811G00800 PE=3 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 7.8e-65
Identity = 124/133 (93.23%), Postives = 130/133 (97.74%), Query Frame = 0


Query: 1   MVAMFLHVLAHDVKNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPVPNCLGALD 60
           ++AMFLHVLAHDVKNRVIQREFVRSG+T+SRHFNIVLLA+LRLYEELIKRPVPNCLGALD
Sbjct: 13  VLAMFLHVLAHDVKNRVIQREFVRSGKTISRHFNIVLLAILRLYEELIKRPVPNCLGALD 72

Query: 61  GTYIKVNVPAGDRPTFRMCKGEIATNVLGVCDTKGDFVYVLAGWEGSAADSRILRDAISR 120
           GTYIKVNVPAGDRPTFR CKGEIATNVLGVCDTKGDFVYVLA WEG AADSRILRDA+SR
Sbjct: 73  GTYIKVNVPAGDRPTFRTCKGEIATNVLGVCDTKGDFVYVLACWEGYAADSRILRDALSR 132

Query: 121 ENGLQVPKGISSL 134
           ENGLQVPKGISSL
Sbjct: 133 ENGLQVPKGISSL 145

[Close]

BLAST of Cmc09g0251641 vs. ExPASy TrEMBL
Match: A0A5A7V6J9 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold79G00810 PE=3 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 1.3e-64
Identity = 126/129 (97.67%), Postives = 127/129 (98.45%), Query Frame = 0


Query: 1   MVAMFLHVLAHDVKNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPVPNCLGALD 60
           MVAMFLHVLAHDVKNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPVPNCLGALD
Sbjct: 69  MVAMFLHVLAHDVKNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPVPNCLGALD 128

Query: 61  GTYIKVNVPAGDRPTFRMCKGEIATNVLGVCDTKGDFVYVLAGWEGSAADSRILRDAISR 120
           GTYIKVNVPAGDRPTFR  KGEIATNVLGVCDTKGDFVYVLAGWEGSAADS+ILRDAISR
Sbjct: 129 GTYIKVNVPAGDRPTFRTRKGEIATNVLGVCDTKGDFVYVLAGWEGSAADSQILRDAISR 188

Query: 121 ENGLQVPKG 130
           ENGLQVPKG
Sbjct: 189 ENGLQVPKG 197

[Close]

BLAST of Cmc09g0251641 vs. ExPASy TrEMBL
Match: A0A5A7U6C1 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55G001970 PE=3 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 1.3e-64
Identity = 126/129 (97.67%), Postives = 126/129 (97.67%), Query Frame = 0


Query: 1   MVAMFLHVLAHDVKNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPVPNCLGALD 60
           MVAMFLHVLAHDVKNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPVPNCLGALD
Sbjct: 69  MVAMFLHVLAHDVKNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPVPNCLGALD 128

Query: 61  GTYIKVNVPAGDRPTFRMCKGEIATNVLGVCDTKGDFVYVLAGWEGSAADSRILRDAISR 120
           GTYIKVNVP GDRPTFR  KGEIATNVLGVCDTKGDFVYVLAGWEGSAADSRILRDAISR
Sbjct: 129 GTYIKVNVPTGDRPTFRTRKGEIATNVLGVCDTKGDFVYVLAGWEGSAADSRILRDAISR 188

Query: 121 ENGLQVPKG 130
           ENGLQVPKG
Sbjct: 189 ENGLQVPKG 197

[Close]

BLAST of Cmc09g0251641 vs. ExPASy TrEMBL
Match: A0A5A7T1V5 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold9475G00150 PE=3 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 3.0e-64
Identity = 125/129 (96.90%), Postives = 127/129 (98.45%), Query Frame = 0


Query: 1   MVAMFLHVLAHDVKNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPVPNCLGALD 60
           MVAMFLHVLAHDVKNRVIQREFVRSGETVSRHFNIVLLAVLRLYEEL+KRPVPNCLGALD
Sbjct: 69  MVAMFLHVLAHDVKNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELMKRPVPNCLGALD 128

Query: 61  GTYIKVNVPAGDRPTFRMCKGEIATNVLGVCDTKGDFVYVLAGWEGSAADSRILRDAISR 120
           GTYIKVNVPAGDRPTFR  KGEIATNVLGVCDTKGDFVYVLAGWEGSAADSRILRDAIS+
Sbjct: 129 GTYIKVNVPAGDRPTFRTRKGEIATNVLGVCDTKGDFVYVLAGWEGSAADSRILRDAISQ 188

Query: 121 ENGLQVPKG 130
           ENGLQVPKG
Sbjct: 189 ENGLQVPKG 197

[Close]

BLAST of Cmc09g0251641 vs. TAIR 10
Match: AT5G41980.1 (CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 100.9 bits (250), Expect = 8.1e-22
Identity = 55/141 (39.01%), Postives = 81/141 (57.45%), Query Frame = 0


Query: 2   VAMFLHVLAHDVKNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPVPN------- 61
           +A+FL ++ H+++ R +Q  F  SGET+SRHFN VL AV+ + ++   +P  N       
Sbjct: 78  LAIFLFIIGHNLRTRAVQELFCYSGETISRHFNNVLNAVIAISKDFF-QPNSNSDTLEND 137

Query: 62  ------CLGALDGTYIKVNVPAGDRPTFRMCKGEIATNVLGVCDTKGDFVYVLAGWEGSA 121
                 C+G +D  +I V V   ++  FR   G +  NVL        F YVLAGWEGSA
Sbjct: 138 DPYFKDCVGVVDSFHIPVMVGVDEQGPFRNGNGLLTQNVLAASSFDLRFNYVLAGWEGSA 197

Query: 122 ADSRILRDAISRENGLQVPKG 130
           +D ++L  A++R N LQVP+G
Sbjct: 198 SDQQVLNAALTRRNKLQVPQG 217

[Close]

BLAST of Cmc09g0251641 vs. TAIR 10
Match: AT5G28950.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41980.1); Has 448 Blast hits to 446 proteins in 74 species: Archae - 0; Bacteria - 0; Metazoa - 31; Fungi - 21; Plants - 396; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 78.2 bits (191), Expect = 5.6e-15
Identity = 36/76 (47.37%), Postives = 53/76 (69.74%), Query Frame = 0


Query: 54  NCLGALDGTYIKVNVPAGDRPTFRMCKGEIATNVLGVCDTKGDFVYVLAGWEGSAADSRI 113
           +C+GA+D T+I   V     P+FR  KG+I+ N+L  C+   +F+YVL+GWEGSA DS++
Sbjct: 24  DCVGAIDDTHIFAMVSQKKMPSFRNRKGDISQNMLAACNFDVEFMYVLSGWEGSAHDSKV 83

Query: 114 LRDAISR-ENGLQVPK 129
           L DA++R  N L VP+
Sbjct: 84  LNDALTRNSNRLPVPE 99

[Close]

BLAST of Cmc09g0251641 vs. TAIR 10
Match: AT1G43722.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G28730.1); Has 924 Blast hits to 912 proteins in 109 species: Archae - 0; Bacteria - 0; Metazoa - 222; Fungi - 31; Plants - 661; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). )

HSP 1 Score: 58.2 bits (139), Expect = 6.0e-09
Identity = 42/147 (28.57%), Postives = 65/147 (44.22%), Query Frame = 0


Query: 2   VAMFLHVLAHDVKNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELIKRP-------VPN 61
           VAMFL +  H+   R +   F R+ ETV R F  VL A   L  + I+ P       +P 
Sbjct: 102 VAMFLRICGHNEVYRDVGLRFGRNQETVQRKFREVLTATELLACDYIRTPTRQELYRIPE 161

Query: 62  CL--------------GALDGTYIKVNVPAGDRPTFRMCKGEIATNVLGVCDTKGDFVYV 121
            L              GA+DGT++ V V    +  +       + N++ +CD K  F Y+
Sbjct: 162 RLQVDQRYWPYFSGFVGAMDGTHVCVKVKPDLQGMYWNRHDNASLNIMAICDLKMLFTYI 221

Query: 122 LAGWEGSAADSRILRDAISRENGLQVP 128
             G  GS  D+ +L+ A   ++   +P
Sbjct: 222 WNGAPGSCYDTAVLQIAQQSDSEFPLP 248

[Close]

BLAST of Cmc09g0251641 vs. TAIR 10
Match: AT5G28730.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 496 Blast hits to 496 proteins in 68 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 23; Plants - 470; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 53.1 bits (126), Expect = 1.9e-07
Identity = 41/126 (32.54%), Postives = 57/126 (45.24%), Query Frame = 0


Query: 2   VAMFLHVLAHDVKNRVIQREFVRSGETVSRHFNIVLLAVLRLYEELIKRPVPNCLGALDG 61
           VA+FL + A +   R I   F  + ET+ R F+ VL A+ RL  E I+   P  +  L  
Sbjct: 60  VAIFLIICASNDTQRDIALRFGHAQETIWRKFHDVLKAMERLAVEYIR---PRKVEELRA 119

Query: 62  TYIKVNVPAGDRPTFRMCKGEIATNVLGVCDTKGDFVYVLAGWEGSAADSRILRDAISRE 121
              ++       P      G  + NVL +CD    F Y   G  GS  D+R+L  AIS +
Sbjct: 120 ISNRLQDDTRYWPFLMDLLGIASFNVLAICDLDMLFTYCFVGMAGSTHDARVLSAAISDD 179

Query: 122 NGLQVP 128
               VP
Sbjct: 180 PLFHVP 182

[Close]

BLAST of Cmc09g0251641 vs. TAIR 10
Match: AT3G55350.1 (PIF / Ping-Pong family of plant transposases )

HSP 1 Score: 46.6 bits (109), Expect = 1.8e-05
Identity = 24/68 (35.29%), Postives = 38/68 (55.88%), Query Frame = 0


Query: 52  VPNCLGALDGTYIKVNVPAGDRPTFRMCKGE--IATNVLGVCDTKGDFVYVLAGWEGSAA 111
           +PNC GA+D T+I +N+PA +        GE   +  +  V D    F+ V+AGW GS  
Sbjct: 180 LPNCCGAIDITHIVMNLPAVEPSNKVWLDGEKNFSMTLQAVVDPDMRFLDVIAGWPGSLN 239

Query: 112 DSRILRDA 118
           D  +L+++
Sbjct: 240 DDVVLKNS 247

The following BLAST results are available for this feature:

BLAST of Cmc09g0251641 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0067584.1	9.5e-65	89.66	retrotransposon protein [Cucumis melo var. makuwa]	[more]
TYK19867.1	1.6e-64	93.23	retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0051443.1	2.8e-64	97.67	retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0062587.1	2.8e-64	97.67	retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0036923.1	6.1e-64	96.90	retrotransposon protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc09g0251641 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M2U3	2.6e-04	35.29	Protein ALP1-like OS=Arabidopsis thaliana OX=3702 GN=At3g55350 PE=2 SV=1	[more]

BLAST of Cmc09g0251641 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VJQ1	4.6e-65	89.66	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3D8H2	7.8e-65	93.23	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7V6J9	1.3e-64	97.67	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7U6C1	1.3e-64	97.67	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7T1V5	3.0e-64	96.90	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of Cmc09g0251641 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G41980.1	8.1e-22	39.01	CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (Int...	[more]
AT5G28950.1	5.6e-15	47.37	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G43722.1	6.0e-09	28.57	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G28730.1	1.9e-07	32.54	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G55350.1	1.8e-05	35.29	PIF / Ping-Pong family of plant transposases	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027806	Harbinger transposase-derived nuclease domain	PFAM	PF13359	DDE_Tnp_4	coord: 59..117 e-value: 3.5E-7 score: 30.0
None	No IPR available	PANTHER	PTHR22930:SF201	NUCLEASE HARBI1-LIKE PROTEIN	coord: 2..129
None	No IPR available	PANTHER	PTHR22930	UNCHARACTERIZED	coord: 2..129

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc09g0251641.1	Cmc09g0251641.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0046872	metal ion binding