Cmc09g0249861 (gene) Melon (Charmono) v1.1

Overview
NameCmc09g0249861
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Descriptionmitochondrial intermembrane space import and assembly protein 40
LocationCMiso1.1chr09: 15799653 .. 15805292 (-)
RNA-Seq ExpressionCmc09g0249861
SyntenyCmc09g0249861
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTCTCGAGTCCACTCTGCAAAGTTCAGAGCTTCAATCACAACAATCGCCGACTTTTCTACCGATTCCAATTTGAGTTGTTTGAAGGATGGGTCAAGCTGAAAGCGTCGCCGCCGTTTCGCCTCCCAATGATCTACCACCAAGCCCGAATCCATCTGCAAGTCCTGTCTCCGGTTCCTCTTCCGGTCCTCCATCCATGGAATCTCTAATTGCAGGTTTGTCGCATTCTGTTTTATCTCTTCGTGTCTTTTTCTACGTGTCTGTAAAAATGTTTCTGATAGTGAATGAAGCGGTCCTTTTCATATAAGAATGATTCATGTTCAAGAAATTGAAAGTTCGGGTGCTAAAAGAGTTAAGGACTATTGTGAATTCTGTTAAATTTAATTTCTGTTTGTAGTATCTGTTTTAGTATCTGTTTTTATTCTTCATTACATGCTTAGGCAACAATAGAAATTCATTAGTCTGCAGTATGGCCTGCTTCGTGAAGGGATTATATTCATCATTTACGGCCTGGTTTATTCATGGTTATAGGACCTATGATACTTTGCAAGGTTATAAGCAATTGACTGTATGGTTGACTGTGGAGAAAGGATGGTTGCTGAAGAAGAAGGATTCTTGGAAGTGGGTTAGTTATGGGACTAGGAGTTGTCATTCGAATTGTAAAGGGGAGCAGAGAAAGGATAGAATTAGAAGAACGCTTATTGGTAAGTTTCTTCAAAGACATACCCAAAAGTTCGATATTGGAACATGGTTGATTGATTTGTGTTTGAGGTAAAGATTACTTTAGCAAAGGTTTCCAGAAAATAACAATTGGGAAGAGAGTTGTGGAAAAGTTAAAAAGGAGTTTGGCCTTAATAACTGGTGTGATGAGCCTATTTATCAAATAAACTGTGAAATGCTCTGCCAATTAATGTGGCACATGGGCTTGAGCTAAGAGAATCGATCCAGTTTCAACAAGATAGCGATGCTTTATCCCAGTTCTCTTTTTAAAAGGGGGATAGAAGAGATGAGATAAACTTTCTGGATTTCTTATTCTTCCACTGTTCAGCAAATTAAAGTGGTGGCAACTCTTGTCCACCATCAAGTTGAAGGACTAGGATTCTTGTTTCAAGTTTGGTTTCAGTAAGAAGTTTGAATTGTTTGAAGGGAAGGATAGCCTCTTAGTTCTCTTTGAAGGACAAATGAAAATAGAAAACAAAATGAGCTACAGTTACAATGAACAAGTGAAAGCTTGAATAGATCTCAATACAAAAGGCCAAATGGTTTATCTGGTTAGAAATTGGATTGGGGAAGAGAAATTGGAAAATATCAAATTGGCAAGCTTTACAAAAGGATGCAATATTGGATCTTTCACTGTAAGATGGGGGCAATTGGAGCAAAGGAGCTGTTATCGTCGAGCAGATGTGTGCCTCATGCAGTGTATGCACATGGTTTCTTGATCTTGATTTCCTCCCTCTCATCCATACCTGTTGCTTTTGTTTCCTCTAAGTTAACCTTGCTTTTTATGTCTATCCTGACCAGATGAGAAAGAAAAGAGTATTTGGTTTGAAGGTTTGATTTTGTGATCCTCCTTCAGCAATATTGTTATGAATATGACCAATGATCGTGCTACCTCCAACAAGTGCAGCTGGTTGATCTTTGCGTTATTTGGAAACAAAAACATATTTTTTCATTGAAATAATGAAATGAGACTAATGTCCGAATTACAAAAGATGATACAAAACATAAAGCTACCAAAAGCTTGCTAGTACAAGAAGAGAAATTTTAGCCTGTTTTTGCAAGCTTATTCTGAATGGCTACAACAAGTGTGTATTTGTCATCTGACCAACACAGATTTGGCAAAAGAAAATCCTCGTTGGAACTAGATTTTTAGCCACGGACAGCTTCCATTAGTTTAGTCTTACCTGAGTAAGGATAATCAACCATCATTGTAGTCGCCTTGACTTGTAAAACTCCATGTTCTTTATTGAAGCATTTGTCTTCTTCGGCACTTGAGATAGTATGCCAAGCAAGCACTTGATGCATCTGTTGCCTTATGTTTAGTATCCTATGACTTGAAAAACAATATCAGCTGTTATTAATTGGATGCCAAGAGGACTCAATGCATCTGGCGCCTTATGTTCCGTAACCTATGGCTAGTGAAACAATTTCAGCTGTCACTTAATTATAAAATCATCCCCTGAAGAAGTTAATTGGATGCTTTGCTTTTTAGGAGTACTATTGTATATTTTGAATTAGTAAATTTTGTGGGTCTGTCTGTTGGCATTAGTGTGTGTGAGGGGGATAAACACAATGATCGTCTGTCATTTTCTTGCTACTCAGAGGTGTCCTTCAGGCTTCAGGTCTGTAGTGTCTTAGAATTGGAGGCAACTTTTGCCATTACAGGATGTATTGATCTAATTTGTGAGAGGTTACTTTATTATGAAGACCACCAGACTGCTTATAGGAGGGCATCCAATTGAAATTTTTCCAGTGAAAGACTTAACCTTAACTGCACCATGCTTCTGATTGTAGTTATTCTATAGTTCTTCATGGACAGGGAATTTATTTGGAACACTAGCCGTTGTTGGCTGCATACCAGCATTAAGCTGAGGTTTTCTACCGACTAACCATTGAAGTCTTGAGATCTTCTTCAGTTAAAGGGGTATATCACAGATTACATATGTGAAACTGTAAATACCTCTGAAAAGAAAAGCAACGAGCTACCACACGTATGAAATACTAAGCTGGAACACAAAAGATAATAGAGAACACTGAGTAATGCAACTATTTAATCAGAGAACAGAATGGTATTATTTTTCTAGTGTGCTTTAACAATTCTTTGCACACATAAATTGAAATATTATTTGCACTTGTTGTTGTACTAGTTCTCTTTAGTGTTAGACTTGAGGACGTAAATATAACCAGCATTTTCTTTCTTGCAGAAGCTGAAGCTTATGGTAATGAAACAAATGAGGTTTGTCCACTTTAAAGATATAAGCTTCCTTTTGAAATTGGATAGAAACGAAGAAGTTGACCCATGCTTCTTTCAGTCTCTTGATGCCAAAGCTAATAGAGCGTTGGAGTGCCCCTGCATAGCTGACTTGCGTAAAGGTCCGTGTGGGGTCCAGTTTTCTGATGCTTTTCTTTGCTTCTTCAAGAGTACTGCAGAGGAAAAGGTAAGGAAAAAGAAGGAACCACCACATTTTATGTAGCTTTTAAAGGAAAAGTAAGAAGTTATGGCAAAGCTTTTTGGTTGAATTATATTTTTCAATCCTTACCCTGTAATTGTAGTCAATTGGTCTCTGTATAGTTATAAATTTCATTATGATTTGTTAGAACTTACCAAATGTCTTTGACATTATGAGAGTAAAGGAACTCAACGTAGCTAATTATTTTTGAGTGCCATGGCATTAAGCTCTGTAATATAGAAATTAATAGATCACATCGGTTGAAAACATGAAACAGTGCAACATATTTAGGCTTTTTTGGTTGAAAAGTAGAATTAAGGGCTATAACTAATATTGTTTGACACTGCAACTAATTATGCTCGTTAGATTTCTATTACATATTTTTCTGAAAAATTCAATTACAAACATTTATAGCATCTGATTTTTTTGGCTTTTTACCAGAAGAATGAAGCATAGATCCTCGACAATGTTTGAATCCTCACAGCTCCACATGTTGTGTTGAACTCAAAAGTTAAAAAATAACCAAAATTTGTAAATTTGAAACAACCGTTAATTTATGACTTATGAGGTGGTCGTATTTTTTTTTTTTTTTTGAGAAAATAATCTTTGCAAAACCTGTGGTACATACTAACAACTGAATTATGATGTTTTCCAAAGGGATCGGATTGTGTGCATCCTTTTGTGGCTTTGCAGAGCTGCATAAAAGCAAACCCAAATGCATTCTCGAAAGATATCTTGGATGACGATGAAGAAGAAAAGGAAAAAGTAAAGACTGAAGAGCCAACTCAAGATTACAGAGTCATCCCTCCTTCATGGTCTAGAGAACCTCAAATTCCCAAGTCCAAGCTTTAGCTCAAACCATCAGCTTCCATTTTGTCTATCCTGGTATGATTATTATGATTATTTTATTAGGGATGTATCTTTATTTACATTCTTATAATGAATAGGTTTGAGAATCTATTTACATCGTAGCAAATCCTGATTGTTCAATTTCTTCACTTAGTAGAACATTTCTAAACCAAGTCTTGTTTAAACTATTAATTAAATATGAATTTATAATACATGCTTTTATGAGATGCTCTGGTGTGGAAAAGTAACTGGAGAACAATATAATATATATATATATAGAGAGAGAGAGAGAGTATTTTGATGGTGTCCAGGGATAAGGTAGTATTTTGATGGTGTCCAGGATAAGGTTTTAACCACAAGTATGATGATTGGATTACAAAGACACTCATAGTTAAAAATAATTGAAGGCACATAATTTTTTTTTTTTTTTGGATTATGAGACATGTCTCAACTTCTCTAAGGTATAGGGATGTCGTTTGTCCTAAGTTAATCTTAGCGAGAAATTTCTTTCTTGAATCTCAAAAATATTTTGACTGCATTGGATATTATTGCCCATCTTAATCTTTGTTTTTGTGATTCTACAACTTTTTTTGAGGGCCAAAACTTCAAGTGGGTGTTTGGTTGAGGAAAAATGTGATAAATGATCTCTACTGTAGAAGCATCTATTCCATTCCAATAAAATACTCTGCCAAATTTTCTTTTACATGTAGGTGACAATTGGATATATCTTTCTCCCTCCCAAACAAGCCCTGGACCAAGTACAAGATCAAACTAATTTTCAAAAGAACAAAATTGATTCGTAAACTAAGTTGGCCACTGCATTGAAGGCTTTTTATTTGTAGGTCACTTCTTCATTCTTTTTGTTTTTGGTTTTTTGTTAGTTTTTCTAGTTCTTTGAGGTTTCAAGAATCAATTTGTGCAATAAGTTGATCTAAGACAGTAGGATCTGCAAGTGTTGAGGTATCTCCAATCTCATCCAACTGTTTGGATGCAATTTTTCTCAAAACTCTTCTCAATATCTTTCCACTTCTTGTTTTTGGCAACTCATTTGCCCAATGTATTTTATCAGGTGCTGCAAATGCTCCAATCTGGAAATGCAATAACAAAATATTTCACTCTTAAATTACTTTCTTCCAATCCTCTTGAAGTTCATATTCCAGAAAATGATCACTAACCTGTGTTCGAATTGTTTGTTTTAGGCTTTCTCGGAGCTCTTCACTTTGAGGAACTCCCTCGACTAACGTAACAAATGCATGAATACTCTGCCCTTTAACCTGAAGACAAGAGAAAGGTTAAATTACAAATCGAGTTCCTAAACTTTGATTTACAATTCTACATGGTTCCTGTTTTTAAGAGTGTGTCTATTGAACCAACATTGGTTGATTTGTTACGACAAACATTTGAAACAAATATAGAAATGGTTGTGTGACCTCATGATCAATGCCAATTACTGCAGCTTCTGCACAATGAGAGTGTGAAACTAATGCAGATTCCACTTCTGCTGTCCCAATTCGATGTCCACTGCATAATATTAAGTTTTTAGACCATATTTTATGTCTTAAAACTTCTAAATATTTTGACAAAAGCTTGAATTAATTTCAAAATGTAACACTTAAATCTACT

mRNA sequence

TTCTCGAGTCCACTCTGCAAAGTTCAGAGCTTCAATCACAACAATCGCCGACTTTTCTACCGATTCCAATTTGAGTTGTTTGAAGGATGGGTCAAGCTGAAAGCGTCGCCGCCGTTTCGCCTCCCAATGATCTACCACCAAGCCCGAATCCATCTGCAAGTCCTGTCTCCGGTTCCTCTTCCGGTCCTCCATCCATGGAATCTCTAATTGCAGAAGCTGAAGCTTATGGTAATGAAACAAATGAGTCTCTTGATGCCAAAGCTAATAGAGCGTTGGAGTGCCCCTGCATAGCTGACTTGCGTAAAGGTCCGTGTGGGGTCCAGTTTTCTGATGCTTTTCTTTGCTTCTTCAAGAGTACTGCAGAGGAAAAGGGATCGGATTGTGTGCATCCTTTTGTGGCTTTGCAGAGCTGCATAAAAGCAAACCCAAATGCATTCTCGAAAGATATCTTGGATGACGATGAAGAAGAAAAGGAAAAAGTAAAGACTGAAGAGCCAACTCAAGATTACAGAGTCATCCCTCCTTCATGGTCTAGAGAACCTCAAATTCCCAAGTCCAAGCTTTAGCTCAAACCATCAGCTTCCATTTTGTCTATCCTGGTGACAATTGGATATATCTTTCTCCCTCCCAAACAAGCCCTGGACCAAGTACAAGATCAAACTAATTTTCAAAAGAACAAAATTGATTCGTAAACTAAGTTGGCCACTGCATTGAAGGCTTTTTATTTGTAGGCTTTCTCGGAGCTCTTCACTTTGAGGAACTCCCTCGACTAACGTAACAAATGCATGAATACTCTGCCCTTTAACCTGAAGACAAGAGAAAGGTTAAATTACAAATCGAGTTCCTAAACTTTGATTTACAATTCTACATGGTTCCTGTTTTTAAGAGTGTGTCTATTGAACCAACATTGGTTGATTTGTTACGACAAACATTTGAAACAAATATAGAAATGGTTGTGTGACCTCATGATCAATGCCAATTACTGCAGCTTCTGCACAATGAGAGTGTGAAACTAATGCAGATTCCACTTCTGCTGTCCCAATTCGATGTCCACTGCATAATATTAAGTTTTTAGACCATATTTTATGTCTTAAAACTTCTAAATATTTTGACAAAAGCTTGAATTAATTTCAAAATGTAACACTTAAATCTACT

Coding sequence (CDS)

ATGGGTCAAGCTGAAAGCGTCGCCGCCGTTTCGCCTCCCAATGATCTACCACCAAGCCCGAATCCATCTGCAAGTCCTGTCTCCGGTTCCTCTTCCGGTCCTCCATCCATGGAATCTCTAATTGCAGAAGCTGAAGCTTATGGTAATGAAACAAATGAGTCTCTTGATGCCAAAGCTAATAGAGCGTTGGAGTGCCCCTGCATAGCTGACTTGCGTAAAGGTCCGTGTGGGGTCCAGTTTTCTGATGCTTTTCTTTGCTTCTTCAAGAGTACTGCAGAGGAAAAGGGATCGGATTGTGTGCATCCTTTTGTGGCTTTGCAGAGCTGCATAAAAGCAAACCCAAATGCATTCTCGAAAGATATCTTGGATGACGATGAAGAAGAAAAGGAAAAAGTAAAGACTGAAGAGCCAACTCAAGATTACAGAGTCATCCCTCCTTCATGGTCTAGAGAACCTCAAATTCCCAAGTCCAAGCTTTAG

Protein sequence

MGQAESVAAVSPPNDLPPSPNPSASPVSGSSSGPPSMESLIAEAEAYGNETNESLDAKANRALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSKDILDDDEEEKEKVKTEEPTQDYRVIPPSWSREPQIPKSKL
Homology
[Close]
BLAST of Cmc09g0249861 vs. NCBI nr
Match: XP_008465292.1 (PREDICTED: mitochondrial intermembrane space import and assembly protein 40 [Cucumis melo])

HSP 1 Score: 315.5 bits (807), Expect = 2.7e-82
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 0 

Query: 1   MGQAESVAAVSPPNDLPPSPNPSASPVSGSSSGPPSMESLIAEAEAYGNETNESLDAKAN 60
           MGQAESVAAVSPPNDLPPSPNPSASPVSGSSSGPPSMESLIAEAEAYGNETNESLDAKAN
Sbjct: 1   MGQAESVAAVSPPNDLPPSPNPSASPVSGSSSGPPSMESLIAEAEAYGNETNESLDAKAN 60

Query: 61  RALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSKD 120
           RALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSKD
Sbjct: 61  RALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSKD 120

Query: 121 ILDDDEEEKEKVKTEEPTQDYRVIPPSWSREPQIPKSKL 160
           ILDDDEEEKEKVKTEEPTQDYRVIPPSWSREPQIPKSKL
Sbjct: 121 ILDDDEEEKEKVKTEEPTQDYRVIPPSWSREPQIPKSKL 159

[Close]
BLAST of Cmc09g0249861 vs. NCBI nr
Match: XP_004150196.1 (mitochondrial intermembrane space import and assembly protein 40 homolog [Cucumis sativus] >XP_031742113.1 mitochondrial intermembrane space import and assembly protein 40 homolog [Cucumis sativus] >XP_031742114.1 mitochondrial intermembrane space import and assembly protein 40 homolog [Cucumis sativus] >KAE8648380.1 hypothetical protein Csa_023310 [Cucumis sativus])

HSP 1 Score: 285.4 bits (729), Expect = 3.0e-73
Identity = 148/163 (90.80%), Postives = 152/163 (93.25%), Query Frame = 0 

Query: 1   MGQAESVAAVSPPNDLPPSPNPSASPVSGSSSGPPSMESLIAEAEAYGNETNESLDAKAN 60
           MGQAESVAAVSPPNDLPPS N SASPV    SGPPSMESLIAEAEAYGNETNESLDAKAN
Sbjct: 1   MGQAESVAAVSPPNDLPPSLNQSASPV----SGPPSMESLIAEAEAYGNETNESLDAKAN 60

Query: 61  RALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSKD 120
           RALECPCIADLRKG CG+QFSDAFLCFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSKD
Sbjct: 61  RALECPCIADLRKGSCGIQFSDAFLCFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSKD 120

Query: 121 ILDDDEE----EKEKVKTEEPTQDYRVIPPSWSREPQIPKSKL 160
           +LD+DEE    EKEKVKTEEPTQDYRV+PPSWSREPQIPKSKL
Sbjct: 121 VLDEDEEEKEMEKEKVKTEEPTQDYRVVPPSWSREPQIPKSKL 159

[Close]
BLAST of Cmc09g0249861 vs. NCBI nr
Match: XP_022141396.1 (mitochondrial intermembrane space import and assembly protein 40 homolog [Momordica charantia])

HSP 1 Score: 274.2 bits (700), Expect = 6.9e-70
Identity = 140/160 (87.50%), Postives = 147/160 (91.88%), Query Frame = 0 

Query: 1   MGQAESVAAVSPPNDLPPSPNPSASPVSGSSSGPPSMESLIAEAEAYGNETNESLDAKAN 60
           MGQAESVAA SPPNDLP S N +A+PVS SS  PPSM+SLIAEA AYGNE NESLDAKAN
Sbjct: 1   MGQAESVAAASPPNDLPQSRNSAATPVSSSSRDPPSMDSLIAEAAAYGNEANESLDAKAN 60

Query: 61  RALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSKD 120
           RALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSKD
Sbjct: 61  RALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSKD 120

Query: 121 ILDDDE-EEKEKVKTEEPTQDYRVIPPSWSREPQIPKSKL 160
           ILD++E EEKEK K EEP +DYR+IPPSWSREPQIPKSKL
Sbjct: 121 ILDEEEKEEKEKEKAEEPAEDYRIIPPSWSREPQIPKSKL 160

[Close]
BLAST of Cmc09g0249861 vs. NCBI nr
Match: XP_038875961.1 (mitochondrial intermembrane space import and assembly protein 40 homolog [Benincasa hispida])

HSP 1 Score: 273.1 bits (697), Expect = 1.5e-69
Identity = 144/163 (88.34%), Postives = 149/163 (91.41%), Query Frame = 0 

Query: 1   MGQAESVAAVSPPNDLPPSPNPSASPV-SGSSSGPPSMESLIAEAEAYGNETNESLDAKA 60
           MGQ ESVAAVS PNDLP S N SA+PV SGSS  PPSMESLIAEA AYGNETNESLDAKA
Sbjct: 1   MGQVESVAAVSSPNDLPQSRNSSANPVSSGSSPRPPSMESLIAEAAAYGNETNESLDAKA 60

Query: 61  NRALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSK 120
           NRALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSK
Sbjct: 61  NRALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSK 120

Query: 121 DILDDDEE---EKEKVKTEEPTQDYRVIPPSWSREPQIPKSKL 160
           DILDD++E   E+EK K E+PTQDYRVIPPSWSREPQIPKSKL
Sbjct: 121 DILDDEDEEEKEREKEKAEKPTQDYRVIPPSWSREPQIPKSKL 163

[Close]
BLAST of Cmc09g0249861 vs. NCBI nr
Match: XP_023529662.1 (mitochondrial intermembrane space import and assembly protein 40 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 270.4 bits (690), Expect = 9.9e-69
Identity = 139/164 (84.76%), Postives = 146/164 (89.02%), Query Frame = 0 

Query: 1   MGQAESVAAVSPPNDLPPSPNPSASPVSGSSSGPPSMESLIAEAEAYGNETNESLDAKAN 60
           MGQ ESVAA S PNDLP S NPS SPVSGSSS  PSM+SLIAEA AYGNE NESL+AKAN
Sbjct: 1   MGQTESVAAASSPNDLPQSRNPSPSPVSGSSSESPSMDSLIAEAAAYGNEANESLEAKAN 60

Query: 61  RALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSKD 120
           RALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSKD
Sbjct: 61  RALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSKD 120

Query: 121 ILDD-----DEEEKEKVKTEEPTQDYRVIPPSWSREPQIPKSKL 160
           +LD+     +EEE+EK K EEPTQDYR+IPPSWSREPQ PKSKL
Sbjct: 121 VLDEEEEEAEEEEREKQKAEEPTQDYRIIPPSWSREPQAPKSKL 164

[Close]
BLAST of Cmc09g0249861 vs. ExPASy Swiss-Prot
Match: Q8GYJ4 (Mitochondrial intermembrane space import and assembly protein 40 homolog OS=Arabidopsis thaliana OX=3702 GN=MIA40 PE=2 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 3.7e-42
Identity = 94/155 (60.65%), Postives = 114/155 (73.55%), Query Frame = 0 

Query: 1   MGQAESVAAVSPPNDLPPSPNPSA-SPVSGSSSGPPSMESLIAEAEAYGNE--TNESLDA 60
           MGQA+S     P      +P PSA SP     +  PSM+SL+AEA AYG +   NESL+A
Sbjct: 1   MGQAQSDENSIPTTTTTNTPPPSANSPRDSEDTSSPSMDSLLAEAAAYGEDDNENESLEA 60

Query: 61  KANRALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCVHPFVALQSCIKANPNAF 120
           KA RAL+CPCIADLR G CG QFS+AFLCF KSTAEEKGSDCV+PFVALQSCI ANP+AF
Sbjct: 61  KAQRALDCPCIADLRNGSCGSQFSEAFLCFLKSTAEEKGSDCVNPFVALQSCINANPDAF 120

Query: 121 SKDILDDDEEEKEKVKTEEPTQDYRVIPPSWSREP 153
           SK +   DE+E EK + + P QD+R+IPP W+++P
Sbjct: 121 SKSV-TGDEKETEKKEEQPPVQDHRIIPPLWAKDP 154

[Close]
BLAST of Cmc09g0249861 vs. ExPASy Swiss-Prot
Match: Q7XKI7 (Mitochondrial intermembrane space import and assembly protein 40 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=MIA40 PE=2 SV=2)

HSP 1 Score: 144.4 bits (363), Expect = 1.1e-33
Identity = 76/149 (51.01%), Postives = 103/149 (69.13%), Query Frame = 0 

Query: 4   AESVAAVSPPN-DLPPSPNPSASPVSGSSSGPPSMESLIAEAEAYGNETNESLDAKANRA 63
           A++V   SPP  +  PS +PS +P       P S+E+L AEA ++  + NES+D K  +A
Sbjct: 9   AQAVEEPSPPAVEAAPSSSPSPAP------APSSLEALAAEAMSFDEDGNESIDVKVQKA 68

Query: 64  LECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSKDIL 123
           L+CPC+A+L+ GPCG QF DAF CF KST EEKGSDCV PF+ALQ CIK NP AFSK+IL
Sbjct: 69  LDCPCVAELKNGPCGSQFVDAFSCFLKSTEEEKGSDCVKPFIALQDCIKINPEAFSKEIL 128

Query: 124 DDDEEEKEKVKTEEPTQDYRVIPPSWSRE 152
           +++E ++E  K+     + +V  P+WSRE
Sbjct: 129 EEEENDEEAEKS-----NLKVRAPAWSRE 146

[Close]
BLAST of Cmc09g0249861 vs. ExPASy Swiss-Prot
Match: Q8N4Q1 (Mitochondrial intermembrane space import and assembly protein 40 OS=Homo sapiens OX=9606 GN=CHCHD4 PE=1 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 3.6e-13
Identity = 42/119 (35.29%), Postives = 64/119 (53.78%), Query Frame = 0 

Query: 35  PSMESLIAEAEAYGNETNESLDAKANRALECPCIADLRKGPCGVQFSDAFLCFFKSTAEE 94
           PS   L+A+      E +  +    N    CPC+  +  GPCG QF  AF CF  ST E 
Sbjct: 23  PSSAELVADDPNDPYEEHGLILPNGNINWNCPCLGGMASGPCGEQFKSAFSCFHYSTEEI 82

Query: 95  KGSDCVHPFVALQSCIKANPNAFSKDILDDDEEEKEKVKTEEPTQDYRVIPPSWSREPQ 154
           KGSDCV  F A+Q C++  P+ + ++  D+DEEE+ + K  E  ++   I  + ++E +
Sbjct: 83  KGSDCVDQFRAMQECMQKYPDLYPQE--DEDEEEEREKKPAEQAEETAPIEATATKEEE 139

[Close]
BLAST of Cmc09g0249861 vs. ExPASy Swiss-Prot
Match: Q8VEA4 (Mitochondrial intermembrane space import and assembly protein 40 OS=Mus musculus OX=10090 GN=Chchd4 PE=1 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 2.3e-12
Identity = 39/106 (36.79%), Postives = 56/106 (52.83%), Query Frame = 0 

Query: 35  PSMESLIAEAEAYGNETNESLDAKANRALECPCIADLRKGPCGVQFSDAFLCFFKSTAEE 94
           PS   L+A+      E +  +    +    CPC+  +  GPCG QF  AF CF  ST + 
Sbjct: 23  PSSAELVADDPNDPYEEHGLILPNGDINWNCPCLGGMASGPCGEQFKSAFSCFHYSTEDI 82

Query: 95  KGSDCVHPFVALQSCIKANPNAFSKDILDDDEEEKEKVKTEEPTQD 141
           KGSDC+  F A+Q C++  P     D+   DEEE+E+ K  EP ++
Sbjct: 83  KGSDCIDQFRAMQECMQKYP-----DLYPQDEEEEEEAKPVEPVEE 123

[Close]
BLAST of Cmc09g0249861 vs. ExPASy Swiss-Prot
Match: Q5BJN5 (Mitochondrial intermembrane space import and assembly protein 40 OS=Rattus norvegicus OX=10116 GN=Chchd4 PE=2 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 2.3e-12
Identity = 39/106 (36.79%), Postives = 56/106 (52.83%), Query Frame = 0 

Query: 35  PSMESLIAEAEAYGNETNESLDAKANRALECPCIADLRKGPCGVQFSDAFLCFFKSTAEE 94
           PS   L+A+      E +  +    +    CPC+  +  GPCG QF  AF CF  ST + 
Sbjct: 23  PSSAELVADDPNDPYEEHGLILPNGDINWNCPCLGGMASGPCGEQFKSAFSCFHYSTEDI 82

Query: 95  KGSDCVHPFVALQSCIKANPNAFSKDILDDDEEEKEKVKTEEPTQD 141
           KGSDC+  F A+Q C++  P     D+   DEEE+E+ K  EP ++
Sbjct: 83  KGSDCIDQFRAMQECMQKYP-----DLYPQDEEEEEEAKPVEPVEE 123

[Close]
BLAST of Cmc09g0249861 vs. ExPASy TrEMBL
Match: A0A1S3CNJ8 (mitochondrial intermembrane space import and assembly protein 40 OS=Cucumis melo OX=3656 GN=LOC103502941 PE=4 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 1.3e-82
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 0 

Query: 1   MGQAESVAAVSPPNDLPPSPNPSASPVSGSSSGPPSMESLIAEAEAYGNETNESLDAKAN 60
           MGQAESVAAVSPPNDLPPSPNPSASPVSGSSSGPPSMESLIAEAEAYGNETNESLDAKAN
Sbjct: 1   MGQAESVAAVSPPNDLPPSPNPSASPVSGSSSGPPSMESLIAEAEAYGNETNESLDAKAN 60

Query: 61  RALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSKD 120
           RALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSKD
Sbjct: 61  RALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSKD 120

Query: 121 ILDDDEEEKEKVKTEEPTQDYRVIPPSWSREPQIPKSKL 160
           ILDDDEEEKEKVKTEEPTQDYRVIPPSWSREPQIPKSKL
Sbjct: 121 ILDDDEEEKEKVKTEEPTQDYRVIPPSWSREPQIPKSKL 159

[Close]
BLAST of Cmc09g0249861 vs. ExPASy TrEMBL
Match: A0A6J1CJ21 (mitochondrial intermembrane space import and assembly protein 40 homolog OS=Momordica charantia OX=3673 GN=LOC111011808 PE=4 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 3.3e-70
Identity = 140/160 (87.50%), Postives = 147/160 (91.88%), Query Frame = 0 

Query: 1   MGQAESVAAVSPPNDLPPSPNPSASPVSGSSSGPPSMESLIAEAEAYGNETNESLDAKAN 60
           MGQAESVAA SPPNDLP S N +A+PVS SS  PPSM+SLIAEA AYGNE NESLDAKAN
Sbjct: 1   MGQAESVAAASPPNDLPQSRNSAATPVSSSSRDPPSMDSLIAEAAAYGNEANESLDAKAN 60

Query: 61  RALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSKD 120
           RALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSKD
Sbjct: 61  RALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSKD 120

Query: 121 ILDDDE-EEKEKVKTEEPTQDYRVIPPSWSREPQIPKSKL 160
           ILD++E EEKEK K EEP +DYR+IPPSWSREPQIPKSKL
Sbjct: 121 ILDEEEKEEKEKEKAEEPAEDYRIIPPSWSREPQIPKSKL 160

[Close]
BLAST of Cmc09g0249861 vs. ExPASy TrEMBL
Match: A0A6J1JP76 (mitochondrial intermembrane space import and assembly protein 40 homolog OS=Cucurbita maxima OX=3661 GN=LOC111487644 PE=4 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 5.3e-68
Identity = 138/163 (84.66%), Postives = 144/163 (88.34%), Query Frame = 0 

Query: 1   MGQAESVAAVSPPNDLPPSPNPSASPVSGSSSGPPSMESLIAEAEAYGNETNESLDAKAN 60
           MGQ ESVAA S  NDLP S NPS SPVSG SS  PSMESLIAEA AYGNE NESL+AKAN
Sbjct: 1   MGQTESVAAASSTNDLPQSRNPSPSPVSGCSSESPSMESLIAEAAAYGNEANESLEAKAN 60

Query: 61  RALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSKD 120
           RALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSKD
Sbjct: 61  RALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSKD 120

Query: 121 ILD----DDEEEKEKVKTEEPTQDYRVIPPSWSREPQIPKSKL 160
           +LD    ++EEE+EK K EEPTQDYR+IPPSWSREPQ PKSKL
Sbjct: 121 VLDEEEEEEEEEREKQKAEEPTQDYRIIPPSWSREPQAPKSKL 163

[Close]
BLAST of Cmc09g0249861 vs. ExPASy TrEMBL
Match: A0A6J1H043 (mitochondrial intermembrane space import and assembly protein 40 homolog OS=Cucurbita moschata OX=3662 GN=LOC111458724 PE=4 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 2.0e-67
Identity = 138/162 (85.19%), Postives = 145/162 (89.51%), Query Frame = 0 

Query: 1   MGQAESV-AAVSPPNDLPPSPNPSASPVSGSSSGPPSMESLIAEAEAYGNETNESLDAKA 60
           MGQ ESV AA S PNDLP S NPS SPVSGSSS  PSMESLIAEA AYGNE NESL+AKA
Sbjct: 1   MGQTESVAAAASSPNDLPQSRNPSPSPVSGSSSESPSMESLIAEAAAYGNEANESLEAKA 60

Query: 61  NRALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSK 120
           NRALECPCIADLRKGPCGVQFSDAF CFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSK
Sbjct: 61  NRALECPCIADLRKGPCGVQFSDAFFCFFKSTAEEKGSDCVHPFVALQSCIKANPNAFSK 120

Query: 121 DILD--DDEEEKEKVKTEEPTQDYRVIPPSWSREPQIPKSKL 160
           D+LD  ++EEE+EK K EEPT+DYR+IPPSWSREPQ PKSKL
Sbjct: 121 DVLDEEEEEEEREKQKAEEPTKDYRIIPPSWSREPQAPKSKL 162

[Close]
BLAST of Cmc09g0249861 vs. ExPASy TrEMBL
Match: A0A5A7VG35 (Mitochondrial intermembrane space import and assembly protein 40 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold790G00250 PE=4 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 1.1e-52
Identity = 106/111 (95.50%), Postives = 107/111 (96.40%), Query Frame = 0 

Query: 53  ESLDAKANRALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCVHPFVALQSCIKA 112
           +SLDAKANRALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCVHPFVALQSCIKA
Sbjct: 32  QSLDAKANRALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCVHPFVALQSCIKA 91

Query: 113 NPNAFSKDILDDDEE----EKEKVKTEEPTQDYRVIPPSWSREPQIPKSKL 160
           NPNAFSKDILDDDEE    EKEKVKTEEPTQDYRVIPPSWSREPQIPKSKL
Sbjct: 92  NPNAFSKDILDDDEEEKEMEKEKVKTEEPTQDYRVIPPSWSREPQIPKSKL 142

[Close]
BLAST of Cmc09g0249861 vs. TAIR 10
Match: AT5G23395.1 (Cox19-like CHCH family protein )

HSP 1 Score: 172.6 bits (436), Expect = 2.6e-43
Identity = 94/155 (60.65%), Postives = 114/155 (73.55%), Query Frame = 0 

Query: 1   MGQAESVAAVSPPNDLPPSPNPSA-SPVSGSSSGPPSMESLIAEAEAYGNE--TNESLDA 60
           MGQA+S     P      +P PSA SP     +  PSM+SL+AEA AYG +   NESL+A
Sbjct: 1   MGQAQSDENSIPTTTTTNTPPPSANSPRDSEDTSSPSMDSLLAEAAAYGEDDNENESLEA 60

Query: 61  KANRALECPCIADLRKGPCGVQFSDAFLCFFKSTAEEKGSDCVHPFVALQSCIKANPNAF 120
           KA RAL+CPCIADLR G CG QFS+AFLCF KSTAEEKGSDCV+PFVALQSCI ANP+AF
Sbjct: 61  KAQRALDCPCIADLRNGSCGSQFSEAFLCFLKSTAEEKGSDCVNPFVALQSCINANPDAF 120

Query: 121 SKDILDDDEEEKEKVKTEEPTQDYRVIPPSWSREP 153
           SK +   DE+E EK + + P QD+R+IPP W+++P
Sbjct: 121 SKSV-TGDEKETEKKEEQPPVQDHRIIPPLWAKDP 154

The following BLAST results are available for this feature:
BLAST of Cmc09g0249861 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008465292.12.7e-82100.00PREDICTED: mitochondrial intermembrane space import and assembly protein 40 [Cuc... [more]
XP_004150196.13.0e-7390.80mitochondrial intermembrane space import and assembly protein 40 homolog [Cucumi... [more]
XP_022141396.16.9e-7087.50mitochondrial intermembrane space import and assembly protein 40 homolog [Momord... [more]
XP_038875961.11.5e-6988.34mitochondrial intermembrane space import and assembly protein 40 homolog [Beninc... [more]
XP_023529662.19.9e-6984.76mitochondrial intermembrane space import and assembly protein 40 homolog [Cucurb... [more]
BLAST of Cmc09g0249861 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8GYJ43.7e-4260.65Mitochondrial intermembrane space import and assembly protein 40 homolog OS=Arab... [more]
Q7XKI71.1e-3351.01Mitochondrial intermembrane space import and assembly protein 40 homolog OS=Oryz... [more]
Q8N4Q13.6e-1335.29Mitochondrial intermembrane space import and assembly protein 40 OS=Homo sapiens... [more]
Q8VEA42.3e-1236.79Mitochondrial intermembrane space import and assembly protein 40 OS=Mus musculus... [more]
Q5BJN52.3e-1236.79Mitochondrial intermembrane space import and assembly protein 40 OS=Rattus norve... [more]
BLAST of Cmc09g0249861 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3CNJ81.3e-82100.00mitochondrial intermembrane space import and assembly protein 40 OS=Cucumis melo... [more]
A0A6J1CJ213.3e-7087.50mitochondrial intermembrane space import and assembly protein 40 homolog OS=Momo... [more]
A0A6J1JP765.3e-6884.66mitochondrial intermembrane space import and assembly protein 40 homolog OS=Cucu... [more]
A0A6J1H0432.0e-6785.19mitochondrial intermembrane space import and assembly protein 40 homolog OS=Cucu... [more]
A0A5A7VG351.1e-5295.50Mitochondrial intermembrane space import and assembly protein 40 OS=Cucumis melo... [more]
BLAST of Cmc09g0249861 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G23395.12.6e-4360.65Cox19-like CHCH family protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.287.2900coord: 43..122
e-value: 5.0E-24
score: 86.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 121..159
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 121..138
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..52
NoneNo IPR availablePANTHERPTHR21622:SF0AU015836 PROTEIN-RELATEDcoord: 30..154
IPR039289Mitochondrial intermembrane space import and assembly protein 40PANTHERPTHR21622COILED-COIL-HELIX-COILED-COIL-HELIX DOMAIN CONTAINING 4coord: 30..154

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc09g0249861.1Cmc09g0249861.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045041 protein import into mitochondrial intermembrane space
biological_process GO:0022417 protein maturation by protein folding
biological_process GO:0006625 protein targeting to peroxisome
cellular_component GO:0005758 mitochondrial intermembrane space
cellular_component GO:0005777 peroxisome
molecular_function GO:0015035 protein-disulfide reductase activity