Cmc09g0247481 (gene) Melon (Charmono) v1.1

Overview
NameCmc09g0247481
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionDFRP_C domain-containing protein
LocationCMiso1.1chr09: 12234078 .. 12244591 (+)
RNA-Seq ExpressionCmc09g0247481
SyntenyCmc09g0247481
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTGCCTTCCGTTTTTTCTTTCCAACTTGTTTTCTTTATTTTTATTTATATTCTCTCGAATTCCCATTCGAATAGAACAACGATTCGTATAGGTTTTCTCTCAAATCCAAGAATTTGATATACAGTCAACAAAATGGGGGCAGAAGAAGCAGCTATGGAACAAGAGAAGCTCTCATGTAATAATCCAAGGACGGTCCCCATTACAGAGGCCCAATTCCTATCCTGGAAGCGCCAGAAGGTATTTTCCTTCTTCTTCTTCTTCATCAATCTCTCTCAGGCTCTAAATTTATTGTTTCTTTTAATTGCTGCTCTTTAATGTGTCAATTCTCTGCTTGAGTTTTTTAAGGTGCCAATCAATTGTATTTACCCCGAAAAGTTAGAGAATATAGGGTTGTGTTGAATCACTTTTGGGAATTTGCAAACCTCTAGGATTCATTCAATTTTGAGAGGTAATTAGGAATAAATTCCTCTGTTCTTCGCAGAATAATGGGTCTAAATTTTTTCTAAACTCAATTCGGCTTAACTTTTGGAAAGGGATTTAAGAGAAAAACAAATTTAGAATAAACAACCACACAGGCAACAAACTCGAACAAACTAAGATATCACATTGCTAGAAACAAACAAGGTACACCTCCAAACTTTATGTTCTAAAGGGTGCGCTAGTGTACTTTTGGTTGCGGCAAATATCTGAGGAGACAATTCTCAATTCACCATCATTACAAGCCTATGCCTCATCGATAAAAAAGAGACTTCTGAAATATCGACCACATCATCATTTTGGAGTTTAACAATCTCCAAACAGTGAGATTCATCTTGGATATATTAATCGAGGAAAATGAATTGGGTGATGAGGAAGGAAAGGTTTGTAGACTACCGGAGATTGGTTTGACCTAGTGGTAAAAGTGGAAACAGTCTCAATAACTCTAAATAACTAACTAAAAGGACGTGAGTTCAATCCATTTGTAAGACTAGTTAAGGTGTACATAAGCTTACTCGGACACTCACACAGATATCAGAAAAAGGATAAGAAAGGTTTGTATGTATGAAATAACAGAGATAGTCCTAGCCTTCTATGAGGGACTAGGATTATTTTGTTTTCTTTTCTTTTTTTTTATTTATTAAGAAACCAGCTTCAGGGCCCACAAAAAAAGGTAACACCTATTAACAGAGCAAAGTAGAAGAGAAGAAAAAAATAATAATAATAATAGAACCAGATTACTAGAGATTGCGTCTACGTTCTCAACTATTAAAAATAGAAAAATGAGGATAGTTATAGAGTACTCGAATACGCAGAAGGACATTGAAATTGGCTGCATTCTAAATCTCTTCCCATGATTCATTTTGACTGCTTAAAGGTTCTCTTGTTTCTCTCAAGACATAAATTTCACAATGTAACAAAGAATCTCGCATCCCACCGCCAGATAATAAATATTTTTCTTACTGAAGGAGGAATTTACCGATACCTCCTCAATGCCCCTACAACTTCCGGGAGGAACAGAGACTCCAAACTTATTCAAGAAATTTCTCCATAGTGTCAAATATCAATCAATGCAAAGAGACAACTTCAAATCAGGTGAATAATTTCCTTTGTAGATCTTTTCCACACATCATATTCCACACGCCACTCTCAATGGGAAATATAACCATGGACGGAGATCTTTGAATGGAGTTACAATGTTTAACTTTCCCAAAGAAACTGAAGAAGCAAAGAACCTAATCTTTGGATTTTTCCAAATCATGGTGAAGAAAGAGGAGACGGATTGGATTCAGACACCTAATGGGCAACAAGAGAATTCCTAGAGAACACTCCTGAAGGATCAAGAGTCCATTTGAAGTTTGAGATAGGCACATCCCTTGTAGCAGAAAGGAGATTGGCCAAATATGAGATTCATGATCATTAGTAGTCTTCCAAAATTAAAAGTCATGATCTTTATGGAGGGTCGATGTAGAAGAAGAACTATAATTGAGAGGCTTAAGACAGAATTGACAAGCACCTCATTTCCAAGTGAAAATAAAGAGTTGCGTAAGAACTTGGGAAGAATTATTACCGTTCCTAAAGTCCACCGAGCATCAAACATGAGTTCCATTTTCCATGGAAATTGTAATAAAATTGTTAAAGAAGATTAGTGAAATTCTACTAGAAAATACTTACTATATGTAAGTGGCTATCTTTGAATTTGGTGGCTATTAACGTTCTAAATCACATGCTTCAACAATTGATAGACCACATGAACTGCAGGTTCATTTTTATTCGAGTTAGCTAACCACCAAAACGAACCTAAGCCATTCCACCAGTCTTTTAAGAGGGATTTGTGTCAGTAAAGTTGATGAGTAGTTGATGTTTGACATCCTATTACTAACCATCTTCTCTTATTTGCAGGATGCTGAGGCATCTGCTAAAAGAGATGAAACAGCAAGGAAACGTGCGGAAGATATTGCCTTAGGAGCGGTGCAAATGAATGGACGTGAGCTTTTCTTGCACCAACCATGGGTGTTTGATAATTCTCAATATTGAGGTTGGTGGTTTAAGATTGAGAAATTGTCGTGCTACTTTTTGTTCTCTGGAGAAATTGGCTTTGTACTTTAAAATGCTACCTTGCATTGTCATCGTTCATATGAATTAGTTCTTCTGCCCAAAATTTTCCTCTTATTGCTATGGTAGCCATACATGAATCTGTATAGGTTTCATCGCATGGTAAAAACTGTACAAAATGATGCATCCAATTTAAGTGCTGATTTGTTCTTTGCTGTTGACCTAAAATGTCTTTACAGGATGCATTTGTCTTATACCGTCTATAACTCATGTAAATAAATGGCATGTTTTCTTTCTAAAGTATGTCCTACAGGGCATCCAAGTTAATTTGTATCCCATGGTTTTAGCAGCCACGATATTTATCGCCATGTAAATTTCTGTCCCTAATCCCAAATTATCTTGTGAAGTTATGATGCATGGTTAATGGAATCTAATATTAGGGGACCTGTGGATTGGTGCCACTGACAATGAAGTCCTTGCAAAGAATAAAGGATCAGAGGATAAGGTCCTTGCAAAGAACAAATGCATCAATGCGTTTAAGGTAATGTTTATGAAGGCAATTTCTACGTTAAGTCCATATAGAATTTGGCGCAATCTTCATCTTCAAAGTATACCTTGAGTCTTTGACCATTTACCTTAAACACATTCTTTCCGTCCAACCTGACCACCACTAACAAATTTTACCTGAAAATAGACGTAAACGCAAATTGAAGAGCAATAATTTATCTCTAATGTGCAATTCGCGTTTATGGATGCGGCAGTTATGCCATGTCTTTGTCTTTTCCTTGTAAATTTTGGCGTTCTCATAGGCTTGAAAACTCCACTCTTGAAGCTCGTACAATTGAAGTAACCTTGCTTCCCCTACGGCCTTATTGTCGAAGTTTAACTTTTTGCACGCCCATAAAGCCTTATGCTCTAACTCTAGTAGTAAATGGTAGGCCTTTCCGAAGACTAACGTGTAAGACGACATTCCAATAGGCATCTTATACACGGTGCGATATGTCCATAACGAAAAATTCAGATAATCGACCTAGTCTTTGTAGGATGAATTTACCACTTTCTCCAGTATTTTCTTGATTTTTCGGTTGGAGACTTCCGCTTGACCATTTGTTTGGGGATGGTAGGCGGTAGCAACTTTATGGTTGATATTGTACTTAGAGAGCAGTTTAGCCACGATGCGATTAATGAAATGAGAACCTTTATCGTTGATAAGGGCTTTAAGTCTCCCAAATCGCATGATGATGTTCTTTTTCAAGAATTTGTTGACTGTCATGCATCGTTCTTCGCATATTATATAGCTTCAACCCACTTGAGACATACTCTACAGCCAACAAGATGTACAAATGACCATCATATAGAGGAAACGGTCCCATAAAATCAATCCCCCACACATCAAAGAGTTCAATCTCCAAGATGGGTTGTTGAGGCATTTCGCCACGATGAGACATGTTTCCCATTCTTTGGCACCGGTCACAGTGGACCACAAAATTCCTCGCATCTTGAAAGAGAGTGGGCTAGAAATACCCAATTTGCAAGGCCTTCACAACTGTCTTTTATCTGCTAAAATGCTCTTCATAGGGTGCTTCAGCACTTGGCGATTATTTCAGTTATCTCATATTCAGAAACACACCTCAAAATTTGGTCTGGCCCCAATTTGTATAGAAAAGGATCATCCCATCTAGAATTAGCATTGATGAAACAACTTCTTTCTTTGCTGGCAGTTGAAGTCTTACGATCATGTTTTGCAAACCAAGTAATTGACAATGTCTGCATACTAGGGTTTTCTTTACTTTAACGCGAAAGAGTTGTTCATCAGGAAAACCATTTTAAATGTCTTTCTTCTCGGGTTGAAATGGTTCATTGTTTAGACGCGATAAGTAATCCGCCATCTGGTTCTCAATACCTTTGTGGTCTACAATCTCTAGATTAAACTCTTAGAGCAATAATACCTATCTTATCAACCACGACTTAGCGTCCTTTTTCGCCATGAGATATCTGATCGCAGAATGATCAGAGTGTATCGTTACTTTGGAGCCAACAATGTAACTCCTAAACTTTTCTATCGCAAAGACTATTGCAAGCAACTCCTTCTCTATGGTTGTATAATTTTCTTCAGCTTCATTGAGAGTTTTGATCGCATAGTATATCGGGTCAGTCACTTTATCCTTCTTTTGACCCGGCATATCCCCTACCACCACATCACTTGCGTCACACATGAGCTCAAATGGTTGTGACCAATCAGGAGCGACGAGGACAGACGCTGAGGTCAACACATCTTTTAAGGTCTGAAACGCCTAGTTGTATTTCTCATCAAAGTTAAAGGGTTCGTCGACACATATCAAGTTACATAGAGGTTTGGCGATTTGGGAAAATCCTTTAATGAATCTTCTGTAAAATTCAACATATCCCAAAAAGCTCCTCAGCGGCTTGACATTTGAAGGCGGTGGCAACTTACTAACCACATCAATCTTTGCGGGGTCCACTTCTAATCCCATGTTGGAGATCTTGTGCCCAAGCACAATTCCCTCGACCATGAAGTGACGCTTCTTCCAGTACAAGTTGTGTCTCTTCGCATCTCTTTATTACTTCTTCCAAATTGCCCATACATTCTTTGAAGGAGTCCTTAAACACTGAGAAGTCATCCATAAAAATCTCAATTGATCCATCCAGGAAGTCTAAGAAGATAGTGCACCTTTGGAATGCCCTTGGCGCGTTGCATAAGTCGAAAGGCATGCGGTGAAATGCAAATGTGCCACAGGGTTGGTAAACGTGGTTTTGTGTTGATCTTTCAGTGCAATAGTGATATGGTTGTAACCAGAATAACCATCCAAAAAGTAGTAAAATTTCTTTCTCGCAAGCCTATCCAACATTTGGTCAATGAAAGGTAAGATAAAGTGGTCTTTCATTGTCGCCACATTCAATTTACAATAATCCATGCCAATCCTCCATCCCGTGACTGTTAGCATTGGAATTAACTTATTGTTTTCATTTTTCACGACAATCATTCCTCCTTTCTATCGTTTTCAGGTTCTACGGGGAATTTCATCGCGTTAACAACGTTGATAACGTTGACCTTGACTTCTTCGTTATTAAATCGCATTGTCAACTTCCCTCGGTGGACATCTATGAGGGCAAGACCTATTGACAAAAATGGTCACCCCAAAATGATAGGTACTTCTTGATAAGCTTCTTAGTCTAGAATGACGACGTTTGCAGGTAGGGATAAATCTCGTCTTGCACCTTATGTTCCTATCTATTCACCCGAAAAAACAGGAGGTTTATTGAGCCAACGCTAACGAGCTACCCTCACCTATGTAGGTCTAAGTATAATCTCATGTGTACAGAAGTTTACAGTTAGCTCAGGATTAAGATTAAGTTACCTAGGTTATCAATAATCAAAATATTTCATTTTAAACATTAAAGGACGTTATAACATAAAAGTGACTATTTCATGGTTTGGTCTTATGTAAACTATTTACATAGAATGCCCCTACTTTCATGTTTCTACATGAACGACTCAGGATCACAATGTTTATACTAACTACAAAATGGGTCGCATCCATAGTGTTCTCAAAATAAGGTGCCCAACCTTATTAGTATACTATAGACTATTTAGGCTATAAACTCGAACTTAATCCATGTTTGTCTCTATATAAAGTCCAAATTTACTTAAATAGCCACGGAAGTTTAGTTTATTGGATTCAGAATTATCATAGTATTCAATTTCACTAATAATTTATCAATAACGACTTTATTGAACATAATGTGATGACAAACTACGAGTTTTAAGGCATAAATTCCAACAACAATGTCTTCTTTAGTTTTAGAACTTTATCCTCTTGGCCTTTCACAGCATAAACAAGAGTGATAAAAACAAAACTACCTCAATCACGTGTGAGAACTTTCCTTATCCTAGGTGAACCCCTACAAGAGGAATAAGAATAACCTCAATTAAACAATTAGTTAAACAACGCCAAGAAAGCTAAATAGATTTTGGATTGAAAATATTGATCAAAGATAAAAAAGAAATGAGAACTTGTTCCTAACTTCAAGATTTTGAACTCTCCACAATCTAATTGATCAAACTAGATTGAAAGTCCTAAACATGCATTCTAACACAAGAATACAAAGGAAAGCATAAAGCTTGAGAGATAACACTTTATGAGAAAATTTCATTCAAATTCAAGTTGTGTTCAAAATGTGGAAACTACAACCCTATTTATACTAATTTAAAATGTTATATGAAAGGACACAACATTTAATTTTATGCTTTTTCAACTACCCTAATAAATGAAAGTACATGCCATTAAATAAGTACATATTAAAGATGTGAATGAACCTAAAAATGCATTAAAGATGTGAATGATCTAAAAATGCATTAAAGATGTGAATGAATCTGGAAATGCATTAAAGATGTGAATGAATCTTAATTTCTAGATTCATTATGACCCTTGGGTATTCAAGTGACTCTTGAAGTTCCAACTCTTTATTAAAAGACCGACAGTCTAGCTTGTAAATAGCATTTAATCCATCCTGAAGTCTTTTAGGCTTTAGCTTTCATCATTGAGCCTTGACCCATAATGATTGCCTCTTGATTGGTTTGACTTTGAAAGTTCTCCCATGAATTTGCACAATGTGCTTCATTTTACTCATCATTTGAGTTGGTGTAAACTTGTTGAGTCTCATTTTCTGCTTTGTTGTTCAACATCTTATCAAAGAGGTGGTTCTAAGTAGACTTCTTCTTCCAAATATCTATTCAAGAATATTGATTTAACATTCATCTGAAAAATCTTCCAATTAATTTGAGTAGCAAGCACAATTAACAATCTTATAGTCTTCAAACGATCAATGAGAGAGATTACTTCATTGTAACTAATGTCTTTTCTTTTAGAATAGATTTTTGCAACTAATCTTACTTTGTATCTTTTCACTTCTCCCTTTTCGATCATTTGTTTTTATCTTGAACACTCATTTGACACTTACTACTTTCTTTCCACTTGGAAAAGTAGAAAGTTCCCACCTATCATTCTTCTTTATGGATTTTATCTCTTCATCCATAGCAATATTTTATTTGTCATTTTTTAAGCTTATTCAAAATTTCAAAGGTTTATTGGAACCAAATAGACAAAAAATAGTAAGGTTATTACAACTTTGACTTAACTCATCAATTTCATCATGTATGTCTCATAATCTCTTCTCATGCCATAAGACCCTTCACTTGAACTAGCAGATGAAGAAGGTGTGTGTGCGTTTTTTTTTTTTTTTTGTAGAGTGATTGGCGATGGAGAAACAGTGTCACTAAAGTCATCATGATCATTAGGAAAAACATAAACATTTAGTCTTGATCTGGTTCATCATTCCAGTTCCATGGTACTTCTTCATCAAACACAATATCTTTGCTTACCATCGTCTTCTTTGTAACACAATTATAAAGCTTGTAGTTTTTTGGGCTTAAATCATAGCCTACAAAAACATACTTCTCACTTTTATCATTGAGCTTAATTACTACGTTTTTTATCAAGTATATGCCCATAAGTCATATATCCAAATACTCTCAAATGAGCAATGGATGATTTTCTTTCTGTCTATGCTTAGTAAGGAGTTTTGTTCCACAAGCTAGTAGGTAAACTATTCGACAAGTACATTGCACATTCAACAGCTTGTGCCCAAAATTCTTTTGACATCTTTTTGCTCTTCAACATGCTTCGTGTTATGCCATGTTAAGTATTCTTCCTGTCAACAACGCCATTTGTTGAGGAGTAAATGGAACTATCATAGACCAATGAACATTTTTTGCACAAAAAAATCTTTGAATTCATTTAAAGTGAATTCACTTATACTCTTGTCTTATCGCAAAGCTTGTATGTAATATCCACTTACATTCTCAACAAGAGCTTTAAATCTGTTGAACGTGCCAAATACATCTGATTTCTTCTTGACAAAATAAATCCAAGTTTTTTCGTTGAAATCATCAATAAATAATTAATAAGAAATTATTCTTGCCAAAAGAAATTGGTTTGATCCGTTTACAAAGATTAGTGTAGACTAACTTTAGTGATCTCCTTGTTCTTGAAGACGATTCTTGTGGAAAACTCTTACTTGATTGCTTGCTGTAAAAATAACTTTCACAAAATTGATTTGGATGTTTGAGATATGGCTGTCCTTTCACCATATTCTTCCTCGCTAATAGTCTCAAGGCAACAAAGTTCAAATGCCCAAGTCAATCTAAGATGAATCTTTTAAACATGGCTTCAAGCATTCAACAACATTAGTTTGAATGATTAATAAAAGCATTTTATTTTTCGTCATTTGCACTTTAGCAATCATGTTGTCATGATTATCTCTTATAAAAAAAACTATAGTTCTTCGTCAAAATATTATAGTCTTTCACTAAGAGCTATCACAAATTCAAAATATTGTTCTTCATATCAAACACATAATACACATTAGAGATAAACTCATGCTTCCCATTTTTTAAATCGATCAAAATTTTGTCTTCCCTTTCAACTTGAATTTTTGTGGCTTCACAAAAAATATGATATTACCACCAACAGATTCATCAAGCTCCATGGACATCGACTTACTTTCGCATATGTAATTGCTTACACCATTATTCAGATACTATGTGTTCTTTTTTACTTTTGCATGCTAGAAGCAACGATGACTCACCACTTTCTTCATTTTTCTCAACATATCATTTGCATTTTCTTCAACTTTATTTCTCCATTCCCAAGAATAATGTCCAAATTTGACAATTATAACATTCAACCAGCTCATGATCTCACCTTCTTTCCTCATTTGATCTTTCTCCATTTGACCTTGAATAATTAATTTGGCTTCCATGACCTCTTAGTCAATTTGAGTTTGAAATACTACTCTTATCAAATTTTCTTTGACTGTAGTTTCCTCAACATCTTCCTCTGAAATCACCATGTCTATGATTACCACCATGTCCTTAACCTCGATTGCCTTTTTCTAGGTTATATCTTCCTTATCTCTTTCAACGGCAACTTTGACTGAATGAGTTGCCTTAATCATTTGCTTGTAATTCTTGAGAAGCTTCTCTTCACAGGCTTCTAAATAACTCATAAGTTGATCCATGGACATTGTACTCAATTCTTTGATTTTTCAATAACTACGACAATGAAATTAAATCTTTCATCCAATGAGCGAAGTATTTTTTTCTACTACTTACTCATCACTTATTGTATCACCACACCTTTTCATTTCATATACTACAGCTAGCAATCTTGAAGTATAATCTAAAATTGATTCACGCTCCTTTATATGCAGTGATTCATAATCACCTCTCAATTTTTTAAGGCGAACCTTCTTGACTCGATCTACTCTTTTATACGTGTTCTCTAAAATTTGCTATGCTTGATGTGCAATAGTTACTCAAGAAATTTTCTCAAAATTTTGATTTTCAAGAGTGTTGGAATTTTGTCAAAAAGATTTTATGAGATTATCTTTTTATTAATTAGTTATTTAATTCTAAAAAAATAAAAGATCCTTCTTTATTTTAGGAATCTTATATTATTATCTTTTTGAGATTATTCTTGAGGAAATATATACACTATGGAACTTGTGAGTTCTGGTACGCCTGACGAACGAAGAAAGCTTTTGGAGCTGTAAGTCGAATCTGTAATGTAATAACTATGAGCTGAAGAAGGTAGTGTGATTATCTATCTATGGTCTCAACGTATTGATCTATGATGAACTTAATGATGAGTAATATGAAAGAAGAAGCAGTGATCAAGAGATCACCTTAAACTTAGGGGGAGTATGAAGACATCTTCAAAAAGATTCACTCATATGTTTATGGAGAGCCTGAATTCTTAAGTTATGAAGTACTTTAAGATAGTCACATATCTAAGCAGAATATCACTTGCTGTATTGATGTATATTGACTATTGTGAATCTTAATAATATTACTCATTTGATCTATGCGTAGCTCCCCAAATATAGGTGGTATTGGTCGA

mRNA sequence

TTGCCTTCCGTTTTTTCTTTCCAACTTGTTTTCTTTATTTTTATTTATATTCTCTCGAATTCCCATTCGAATAGAACAACGATTCGTATAGGTTTTCTCTCAAATCCAAGAATTTGATATACAGTCAACAAAATGGGGGCAGAAGAAGCAGCTATGGAACAAGAGAAGCTCTCATGTAATAATCCAAGGACGGTCCCCATTACAGAGGCCCAATTCCTATCCTGGAAGCGCCAGAAGGATGCTGAGGCATCTGCTAAAAGAGATGAAACAGCAAGGAAACGTGCGGAAGATATTGCCTTAGGAGCGGTGCAAATGAATGGACGTGAGCTTTTCTTGCACCAACCATGGGTGTTTGATAATTCTCAATATTGAGAGTGATTGGCGATGGAGAAACAGTGTCACTAAAGTCATCATGATCATTAGGAAAAACATAAACATTTAGTCTTGATCTGGTTCATCATTCCAGTTCCATGGTACTTCTTCATCAAACACAATATCTTTGCTTACCATCGTCTTCTTTGTAACACAATTATAAAGCTTGTAGTTTTTTGGGCTTAAATCATAGCCTACAAAAACATACTTCTCACTTTTATCATTGAGCTTAATTACTACGTTTTTTATCAAGTATATGCCCATAAGTCATATATCCAAATACTCTCAAATGAGCAATGGATGATTTTCTTTCTGTCTATGCTTAGTAAGGAGTTTTGTTCCACAAGCTAGTAGGTAAACTATTCGACAAGTACATTGCACATTCAACAGCTTGTGCCCAAAATTCTTTTGACATCTTTTTGCTCTTCAACATGCTTCGTGTTATGCCATGTTAAGTATTCTTCCTGTCAACAACGCCATTTGTTGAGGAGTAAATGGAACTATCATAGACCAATGAACATTTTTTGCACAAAAAAATCTTTGAATTCATTTAAAGTGAATTCACTTATACTCTTGTCTTATCGCAAAGCTTGTATGTAATATCCACTTACATTCTCAACAAGAGCTTTAAATCTGTTGAACGTGCCAAATACATCTGATTTCTTCTTGACAAAATAAATCCAAGTTTTTTCGTTGAAATCATCAATAAATAATTAATAAGAAATTATTCTTGCCAAAAGAAATTGGTTTGATCCGTTTACAAAGATTAGTGTAGACTAACTTTAGTGATCTCCTTGTTCTTGAAGACGATTCTTGTGGAAAACTCTTACTTGATTGCTTGCTGTAAAAATAACTTTCACAAAATTGATTTGGATGTTTGAGATATGGCTGTCCTTTCACCATATTCTTCCTCGCTAATAGTCTCAAGGCAACAAAGTTCAAATGCCCAAGTCAATCTAAGATGAATCTTTTAAACATGGCTTCAAGCATTCAACAACATTAGTTTGAATGATTAATAAAAGCATTTTATTTTTCGTCATTTGCACTTTAGCAATCATGTTGTCATGATTATCTCTTATAAAAAAAACTATAGTTCTTCGTCAAAATATTATAGTCTTTCACTAAGAGCTATCACAAATTCAAAATATTGTTCTTCATATCAAACACATAATACACATTAGAGATAAACTCATGCTTCCCATTTTTTAAATCGATCAAAATTTTGTCTTCCCTTTCAACTTGAATTTTTGTGGCTTCACAAAAAATATGATATTACCACCAACAGATTCATCAAGCTCCATGGACATCGACTTACTTTCGCATATGTAATTGCTTACACCATTATTCAGATACTATGTGTTCTTTTTTACTTTTGCATGCTAGAAGCAACGATGACTCACCACTTTCTTCATTTTTCTCAACATATCATTTGCATTTTCTTCAACTTTATTTCTCCATTCCCAAGAATAATGTCCAAATTTGACAATTATAACATTCAACCAGCTCATGATCTCACCTTCTTTCCTCATTTGATCTTTCTCCATTTGACCTTGAATAATTAATTTGGCTTCCATGACCTCTTAGTCAATTTGAGTTTGAAATACTACTCTTATCAAATTTTCTTTGACTGTAGTTTCCTCAACATCTTCCTCTGAAATCACCATGTCTATGATTACCACCATGTCCTTAACCTCGATTGCCTTTTTCTAGGTTATATCTTCCTTATCTCTTTCAACGGCAACTTTGACTGAATGAGTTGCCTTAATCATTTGCTTGTAATTCTTGAGAAGCTTCTCTTCACAGGCTTCTAAATAACTCATAAGTTGATCCATGGACATTGTACTCAATTCTTTGATTTTTCAATAACTACGACAATGAAATTAAATCTTTCATCCAATGAGCGAAGTATTTTTTTCTACTACTTACTCATCACTTATTGTATCACCACACCTTTTCATTTCATATACTACAGCTAGCAATCTTGAAGTATAATCTAAAATTGATTCACGCTCCTTTATATGCAGTGATTCATAATCACCTCTCAATTTTTTAAGGCGAACCTTCTTGACTCGATCTACTCTTTTATACGTGTTCTCTAAAATTTGCTATGCTTGATGTGCAATAGTTACTCAAGAAATTTTCTCAAAATTTTGATTTTCAAGAGTGTTGGAATTTTGTCAAAAAGATTTTATGAGATTATCTTTTTATTAATTAGTTATTTAATTCTAAAAAAATAAAAGATCCTTCTTTATTTTAGGAATCTTATATTATTATCTTTTTGAGATTATTCTTGAGGAAATATATACACTATGGAACTTGTGAGTTCTGGTACGCCTGACGAACGAAGAAAGCTTTTGGAGCTGTAAGTCGAATCTGTAATGTAATAACTATGAGCTGAAGAAGGTAGTGTGATTATCTATCTATGGTCTCAACGTATTGATCTATGATGAACTTAATGATGAGTAATATGAAAGAAGAAGCAGTGATCAAGAGATCACCTTAAACTTAGGGGGAGTATGAAGACATCTTCAAAAAGATTCACTCATATGTTTATGGAGAGCCTGAATTCTTAAGTTATGAAGTACTTTAAGATAGTCACATATCTAAGCAGAATATCACTTGCTGTATTGATGTATATTGACTATTGTGAATCTTAATAATATTACTCATTTGATCTATGCGTAGCTCCCCAAATATAGGTGGTATTGGTCGA

Coding sequence (CDS)

ATGGGGGCAGAAGAAGCAGCTATGGAACAAGAGAAGCTCTCATGTAATAATCCAAGGACGGTCCCCATTACAGAGGCCCAATTCCTATCCTGGAAGCGCCAGAAGGATGCTGAGGCATCTGCTAAAAGAGATGAAACAGCAAGGAAACGTGCGGAAGATATTGCCTTAGGAGCGGTGCAAATGAATGGACGTGAGCTTTTCTTGCACCAACCATGGGTGTTTGATAATTCTCAATATTGA

Protein sequence

MGAEEAAMEQEKLSCNNPRTVPITEAQFLSWKRQKDAEASAKRDETARKRAEDIALGAVQMNGRELFLHQPWVFDNSQY
Homology
BLAST of Cmc09g0247481 vs. NCBI nr
Match: XP_008460490.1 (PREDICTED: zinc finger CCCH domain-containing protein 15 homolog isoform X2 [Cucumis melo] >XP_016902565.1 PREDICTED: zinc finger CCCH domain-containing protein 15 homolog isoform X2 [Cucumis melo] >XP_016902566.1 PREDICTED: zinc finger CCCH domain-containing protein 15 homolog isoform X2 [Cucumis melo])

HSP 1 Score: 158.3 bits (399), Expect = 2.7e-35
Identity = 78/79 (98.73%), Postives = 78/79 (98.73%), Query Frame = 0

Query: 1  MGAEEAAMEQEKLSCNNPRTVPITEAQFLSWKRQKDAEASAKRDETARKRAEDIALGAVQ 60
          MG EEAAMEQEKLSCNNPRTVPITEAQFLSWKRQKDAEASAKRDETARKRAEDIALGAVQ
Sbjct: 1  MGDEEAAMEQEKLSCNNPRTVPITEAQFLSWKRQKDAEASAKRDETARKRAEDIALGAVQ 60

Query: 61 MNGRELFLHQPWVFDNSQY 80
          MNGRELFLHQPWVFDNSQY
Sbjct: 61 MNGRELFLHQPWVFDNSQY 79

BLAST of Cmc09g0247481 vs. NCBI nr
Match: XP_022939418.1 (zinc finger CCCH domain-containing protein 15 homolog [Cucurbita moschata] >XP_023549915.1 zinc finger CCCH domain-containing protein 15 homolog [Cucurbita pepo subsp. pepo] >KAG6579014.1 hypothetical protein SDJN03_23462, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 147.9 bits (372), Expect = 3.7e-32
Identity = 72/79 (91.14%), Postives = 75/79 (94.94%), Query Frame = 0

Query: 1  MGAEEAAMEQEKLSCNNPRTVPITEAQFLSWKRQKDAEASAKRDETARKRAEDIALGAVQ 60
          MGAEEAAMEQEKL+  NPRT+PITE QFLSWKRQKDAEASAKRDETARKRA+DIA GAVQ
Sbjct: 1  MGAEEAAMEQEKLASRNPRTIPITETQFLSWKRQKDAEASAKRDETARKRADDIASGAVQ 60

Query: 61 MNGRELFLHQPWVFDNSQY 80
          MNGRELFLHQPWVFDNSQY
Sbjct: 61 MNGRELFLHQPWVFDNSQY 79

BLAST of Cmc09g0247481 vs. NCBI nr
Match: XP_011655210.1 (zinc finger CCCH domain-containing protein 15 homolog [Cucumis sativus] >XP_011655211.1 zinc finger CCCH domain-containing protein 15 homolog [Cucumis sativus] >XP_011655212.1 zinc finger CCCH domain-containing protein 15 homolog [Cucumis sativus] >KGN51013.1 hypothetical protein Csa_009113 [Cucumis sativus])

HSP 1 Score: 147.1 bits (370), Expect = 6.3e-32
Identity = 75/80 (93.75%), Postives = 78/80 (97.50%), Query Frame = 0

Query: 1  MGAEEAAMEQEK-LSCNNPRTVPITEAQFLSWKRQKDAEASAKRDETARKRAEDIALGAV 60
          MGAEEAAMEQEK LS +NPRTVPITEAQFLSWKR+KDAEASAKR+ETARKRAEDIALGAV
Sbjct: 1  MGAEEAAMEQEKNLSSHNPRTVPITEAQFLSWKRRKDAEASAKREETARKRAEDIALGAV 60

Query: 61 QMNGRELFLHQPWVFDNSQY 80
          QMNGRELFLHQPWVFDNSQY
Sbjct: 61 QMNGRELFLHQPWVFDNSQY 80

BLAST of Cmc09g0247481 vs. NCBI nr
Match: XP_022992866.1 (zinc finger CCCH domain-containing protein 15 homolog [Cucurbita maxima])

HSP 1 Score: 144.4 bits (363), Expect = 4.1e-31
Identity = 71/79 (89.87%), Postives = 74/79 (93.67%), Query Frame = 0

Query: 1  MGAEEAAMEQEKLSCNNPRTVPITEAQFLSWKRQKDAEASAKRDETARKRAEDIALGAVQ 60
          M AEEAAMEQEKL+  NPRT+PITE QFLSWKRQKDAEASAKRDETARKRA+DIA GAVQ
Sbjct: 1  MVAEEAAMEQEKLASRNPRTIPITETQFLSWKRQKDAEASAKRDETARKRADDIASGAVQ 60

Query: 61 MNGRELFLHQPWVFDNSQY 80
          MNGRELFLHQPWVFDNSQY
Sbjct: 61 MNGRELFLHQPWVFDNSQY 79

BLAST of Cmc09g0247481 vs. NCBI nr
Match: XP_022141384.1 (zinc finger CCCH domain-containing protein 15 homolog [Momordica charantia])

HSP 1 Score: 141.4 bits (355), Expect = 3.4e-30
Identity = 72/81 (88.89%), Postives = 76/81 (93.83%), Query Frame = 0

Query: 1  MGAEE--AAMEQEKLSCNNPRTVPITEAQFLSWKRQKDAEASAKRDETARKRAEDIALGA 60
          MGAEE  AAME+EKL+ +NPRT PITEAQFLSWKRQKDAEASAKRDETARKRAEDIA GA
Sbjct: 1  MGAEEAAAAMEKEKLTSHNPRTNPITEAQFLSWKRQKDAEASAKRDETARKRAEDIATGA 60

Query: 61 VQMNGRELFLHQPWVFDNSQY 80
          VQMNGRELFLHQPWVFDN+QY
Sbjct: 61 VQMNGRELFLHQPWVFDNTQY 81

BLAST of Cmc09g0247481 vs. ExPASy TrEMBL
Match: A0A1S3CCP9 (zinc finger CCCH domain-containing protein 15 homolog isoform X2 OS=Cucumis melo OX=3656 GN=LOC103499290 PE=4 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 1.3e-35
Identity = 78/79 (98.73%), Postives = 78/79 (98.73%), Query Frame = 0

Query: 1  MGAEEAAMEQEKLSCNNPRTVPITEAQFLSWKRQKDAEASAKRDETARKRAEDIALGAVQ 60
          MG EEAAMEQEKLSCNNPRTVPITEAQFLSWKRQKDAEASAKRDETARKRAEDIALGAVQ
Sbjct: 1  MGDEEAAMEQEKLSCNNPRTVPITEAQFLSWKRQKDAEASAKRDETARKRAEDIALGAVQ 60

Query: 61 MNGRELFLHQPWVFDNSQY 80
          MNGRELFLHQPWVFDNSQY
Sbjct: 61 MNGRELFLHQPWVFDNSQY 79

BLAST of Cmc09g0247481 vs. ExPASy TrEMBL
Match: A0A6J1FLL2 (zinc finger CCCH domain-containing protein 15 homolog OS=Cucurbita moschata OX=3662 GN=LOC111445336 PE=4 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 1.8e-32
Identity = 72/79 (91.14%), Postives = 75/79 (94.94%), Query Frame = 0

Query: 1  MGAEEAAMEQEKLSCNNPRTVPITEAQFLSWKRQKDAEASAKRDETARKRAEDIALGAVQ 60
          MGAEEAAMEQEKL+  NPRT+PITE QFLSWKRQKDAEASAKRDETARKRA+DIA GAVQ
Sbjct: 1  MGAEEAAMEQEKLASRNPRTIPITETQFLSWKRQKDAEASAKRDETARKRADDIASGAVQ 60

Query: 61 MNGRELFLHQPWVFDNSQY 80
          MNGRELFLHQPWVFDNSQY
Sbjct: 61 MNGRELFLHQPWVFDNSQY 79

BLAST of Cmc09g0247481 vs. ExPASy TrEMBL
Match: A0A0A0KN87 (DFRP_C domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G407070 PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 3.0e-32
Identity = 75/80 (93.75%), Postives = 78/80 (97.50%), Query Frame = 0

Query: 1  MGAEEAAMEQEK-LSCNNPRTVPITEAQFLSWKRQKDAEASAKRDETARKRAEDIALGAV 60
          MGAEEAAMEQEK LS +NPRTVPITEAQFLSWKR+KDAEASAKR+ETARKRAEDIALGAV
Sbjct: 1  MGAEEAAMEQEKNLSSHNPRTVPITEAQFLSWKRRKDAEASAKREETARKRAEDIALGAV 60

Query: 61 QMNGRELFLHQPWVFDNSQY 80
          QMNGRELFLHQPWVFDNSQY
Sbjct: 61 QMNGRELFLHQPWVFDNSQY 80

BLAST of Cmc09g0247481 vs. ExPASy TrEMBL
Match: A0A6J1JUQ1 (zinc finger CCCH domain-containing protein 15 homolog OS=Cucurbita maxima OX=3661 GN=LOC111489071 PE=4 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 2.0e-31
Identity = 71/79 (89.87%), Postives = 74/79 (93.67%), Query Frame = 0

Query: 1  MGAEEAAMEQEKLSCNNPRTVPITEAQFLSWKRQKDAEASAKRDETARKRAEDIALGAVQ 60
          M AEEAAMEQEKL+  NPRT+PITE QFLSWKRQKDAEASAKRDETARKRA+DIA GAVQ
Sbjct: 1  MVAEEAAMEQEKLASRNPRTIPITETQFLSWKRQKDAEASAKRDETARKRADDIASGAVQ 60

Query: 61 MNGRELFLHQPWVFDNSQY 80
          MNGRELFLHQPWVFDNSQY
Sbjct: 61 MNGRELFLHQPWVFDNSQY 79

BLAST of Cmc09g0247481 vs. ExPASy TrEMBL
Match: A0A6J1CIH3 (zinc finger CCCH domain-containing protein 15 homolog OS=Momordica charantia OX=3673 GN=LOC111011797 PE=4 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 1.7e-30
Identity = 72/81 (88.89%), Postives = 76/81 (93.83%), Query Frame = 0

Query: 1  MGAEE--AAMEQEKLSCNNPRTVPITEAQFLSWKRQKDAEASAKRDETARKRAEDIALGA 60
          MGAEE  AAME+EKL+ +NPRT PITEAQFLSWKRQKDAEASAKRDETARKRAEDIA GA
Sbjct: 1  MGAEEAAAAMEKEKLTSHNPRTNPITEAQFLSWKRQKDAEASAKRDETARKRAEDIATGA 60

Query: 61 VQMNGRELFLHQPWVFDNSQY 80
          VQMNGRELFLHQPWVFDN+QY
Sbjct: 61 VQMNGRELFLHQPWVFDNTQY 81

BLAST of Cmc09g0247481 vs. TAIR 10
Match: AT1G22140.1 (unknown protein; Has 40 Blast hits to 40 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 9; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). )

HSP 1 Score: 85.5 bits (210), Expect = 2.1e-17
Identity = 40/62 (64.52%), Postives = 49/62 (79.03%), Query Frame = 0

Query: 18 PRTVPITEAQFLSWKRQKDAEASAKRDETARKRAEDIALGAVQMNGRELFLHQPWVFDNS 77
          P  + I++ QFL+WKRQKDAE  AK+ E ARKR EDIA G V MNGRELFLH+PWVFD++
Sbjct: 11 PTQISISKDQFLAWKRQKDAELLAKQAEAARKRQEDIASGRVPMNGRELFLHEPWVFDDT 70

Query: 78 QY 80
           +
Sbjct: 71 HH 72

BLAST of Cmc09g0247481 vs. TAIR 10
Match: AT1G22140.2 (unknown protein; Has 25 Blast hits to 25 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 49.7 bits (117), Expect = 1.3e-06
Identity = 25/40 (62.50%), Postives = 30/40 (75.00%), Query Frame = 0

Query: 18 PRTVPITEAQFLSWKRQKDAEASAKRDETARKRAEDIALG 58
          P  + I++ QFL+WKRQKDAE  AK+ E ARKR EDIA G
Sbjct: 11 PTQISISKDQFLAWKRQKDAELLAKQAEAARKRQEDIASG 50

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_008460490.12.7e-3598.73PREDICTED: zinc finger CCCH domain-containing protein 15 homolog isoform X2 [Cuc... [more]
XP_022939418.13.7e-3291.14zinc finger CCCH domain-containing protein 15 homolog [Cucurbita moschata] >XP_0... [more]
XP_011655210.16.3e-3293.75zinc finger CCCH domain-containing protein 15 homolog [Cucumis sativus] >XP_0116... [more]
XP_022992866.14.1e-3189.87zinc finger CCCH domain-containing protein 15 homolog [Cucurbita maxima][more]
XP_022141384.13.4e-3088.89zinc finger CCCH domain-containing protein 15 homolog [Momordica charantia][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A1S3CCP91.3e-3598.73zinc finger CCCH domain-containing protein 15 homolog isoform X2 OS=Cucumis melo... [more]
A0A6J1FLL21.8e-3291.14zinc finger CCCH domain-containing protein 15 homolog OS=Cucurbita moschata OX=3... [more]
A0A0A0KN873.0e-3293.75DFRP_C domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G407070 PE=4... [more]
A0A6J1JUQ12.0e-3189.87zinc finger CCCH domain-containing protein 15 homolog OS=Cucurbita maxima OX=366... [more]
A0A6J1CIH31.7e-3088.89zinc finger CCCH domain-containing protein 15 homolog OS=Momordica charantia OX=... [more]
Match NameE-valueIdentityDescription
AT1G22140.12.1e-1764.52unknown protein; Has 40 Blast hits to 40 proteins in 14 species: Archae - 0; Bac... [more]
AT1G22140.21.3e-0662.50unknown protein; Has 25 Blast hits to 25 proteins in 9 species: Archae - 0; Bact... [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032378ZC3H15/TMA46 family, C-terminalPFAMPF16543DFRP_Ccoord: 7..75
e-value: 8.0E-9
score: 35.9
NoneNo IPR availableGENE3D6.20.400.10coord: 4..71
e-value: 2.8E-6
score: 29.3
NoneNo IPR availablePANTHERPTHR12681ZINC FINGER-CONTAINING PROTEIN P48ZNFcoord: 1..79
NoneNo IPR availablePANTHERPTHR12681:SF10OS03G0385301 PROTEINcoord: 1..79

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc09g0247481.1Cmc09g0247481.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0002181 cytoplasmic translation
cellular_component GO:0005829 cytosol