Cmc09g0242571 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc09g0242571
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Integrase
Location	CMiso1.1chr09: 4854814 .. 4855176 (-)
RNA-Seq Expression	Cmc09g0242571
Synteny	Cmc09g0242571

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGAGTATTCAAGAAATTTATAATGCTACTAACAAAATTAATGATGATCATTTTGCTCATTTTGCATTGTTTGTTGGTGTTGATCCTGTAACTTTTGATGAAGCCATCCAAGATGAGAAATGGAAGATTGCAATGGATCAAGAAATTAATGCGATAAGAAGAAATGAAACATGGGAGTTGATGGAGCTTCCAACAAATAAACAAGCTCTTGGAGTAAACTGGATTTACAGAACAAAGTTGAAGTCAAATGGTAATGTTGAAAAATACAAGGCAAGACTTGTTGTAAAAGGCTACAAGCAGAAATACGGTGTGGATTATGAAAAAATATTTGCCCCTGTAACAAGAATTGAGACCATCTGA

mRNA sequence

ATGAGGAGTATTCAAGAAATTTATAATGCTACTAACAAAATTAATGATGATCATTTTGCTCATTTTGCATTGTTTGTTGGTGTTGATCCTGTAACTTTTGATGAAGCCATCCAAGATGAGAAATGGAAGATTGCAATGGATCAAGAAATTAATGCGATAAGAAGAAATGAAACATGGGAGTTGATGGAGCTTCCAACAAATAAACAAGCTCTTGGAGTAAACTGGATTTACAGAACAAAGTTGAAGTCAAATGGTAATGTTGAAAAATACAAGGCAAGACTTGTTGTAAAAGGCTACAAGCAGAAATACGGTGTGGATTATGAAAAAATATTTGCCCCTGTAACAAGAATTGAGACCATCTGA

Coding sequence (CDS)

ATGAGGAGTATTCAAGAAATTTATAATGCTACTAACAAAATTAATGATGATCATTTTGCTCATTTTGCATTGTTTGTTGGTGTTGATCCTGTAACTTTTGATGAAGCCATCCAAGATGAGAAATGGAAGATTGCAATGGATCAAGAAATTAATGCGATAAGAAGAAATGAAACATGGGAGTTGATGGAGCTTCCAACAAATAAACAAGCTCTTGGAGTAAACTGGATTTACAGAACAAAGTTGAAGTCAAATGGTAATGTTGAAAAATACAAGGCAAGACTTGTTGTAAAAGGCTACAAGCAGAAATACGGTGTGGATTATGAAAAAATATTTGCCCCTGTAACAAGAATTGAGACCATCTGA

Protein sequence

MRSIQEIYNATNKINDDHFAHFALFVGVDPVTFDEAIQDEKWKIAMDQEINAIRRNETWELMELPTNKQALGVNWIYRTKLKSNGNVEKYKARLVVKGYKQKYGVDYEKIFAPVTRIETI

Homology

[Close]

BLAST of Cmc09g0242571 vs. NCBI nr
Match: KAA0037654.1 (integrase [Cucumis melo var. makuwa] >TYK22799.1 integrase [Cucumis melo var. makuwa])

HSP 1 Score: 238.4 bits (607), Expect = 3.1e-59
Identity = 116/120 (96.67%), Postives = 118/120 (98.33%), Query Frame = 0


Query: 1   MRSIQEIYNATNKINDDHFAHFALFVGVDPVTFDEAIQDEKWKIAMDQEINAIRRNETWE 60
           +RSIQEIYNATN INDDHFAHFALFVGVDPVTFDEAIQDEKWKIAMDQEINAIRRNETWE
Sbjct: 406 IRSIQEIYNATNIINDDHFAHFALFVGVDPVTFDEAIQDEKWKIAMDQEINAIRRNETWE 465

Query: 61  LMELPTNKQALGVNWIYRTKLKSNGNVEKYKARLVVKGYKQKYGVDYEKIFAPVTRIETI 120
           LMELPTNKQALGVNWIYRTKLKSN NVEKYKARLVVKGYKQ+YGVDYEKIFAPVTRIETI
Sbjct: 466 LMELPTNKQALGVNWIYRTKLKSNDNVEKYKARLVVKGYKQEYGVDYEKIFAPVTRIETI 525

[Close]

BLAST of Cmc09g0242571 vs. NCBI nr
Match: TYJ95504.1 (integrase [Cucumis melo var. makuwa] >TYK08522.1 integrase [Cucumis melo var. makuwa] >TYK12883.1 integrase [Cucumis melo var. makuwa] >TYK20599.1 integrase [Cucumis melo var. makuwa])

HSP 1 Score: 230.7 bits (587), Expect = 6.6e-57
Identity = 110/120 (91.67%), Postives = 117/120 (97.50%), Query Frame = 0


Query: 1   MRSIQEIYNATNKINDDHFAHFALFVGVDPVTFDEAIQDEKWKIAMDQEINAIRRNETWE 60
           MRSIQEIYN TN+INDDHFA+FALF GVDPVTFDEAIQDEKWKIAMDQEI+AIRRNETWE
Sbjct: 812 MRSIQEIYNTTNRINDDHFANFALFAGVDPVTFDEAIQDEKWKIAMDQEIDAIRRNETWE 871

Query: 61  LMELPTNKQALGVNWIYRTKLKSNGNVEKYKARLVVKGYKQKYGVDYEKIFAPVTRIETI 120
           LMELPTNKQALGV W+YRTKLKS+GNVEKYKARLVVKGYKQ+YGVDYE+IFAPVTRIETI
Sbjct: 872 LMELPTNKQALGVKWVYRTKLKSDGNVEKYKARLVVKGYKQEYGVDYEEIFAPVTRIETI 931

[Close]

BLAST of Cmc09g0242571 vs. NCBI nr
Match: KAA0060377.1 (integrase [Cucumis melo var. makuwa])

HSP 1 Score: 230.7 bits (587), Expect = 6.6e-57
Identity = 110/120 (91.67%), Postives = 117/120 (97.50%), Query Frame = 0


Query: 1   MRSIQEIYNATNKINDDHFAHFALFVGVDPVTFDEAIQDEKWKIAMDQEINAIRRNETWE 60
           MRSIQEIYN TN+INDDHFA+FALF GVDPVTFDEAIQDEKWKIAMDQEI+AIRRNETWE
Sbjct: 812 MRSIQEIYNTTNRINDDHFANFALFAGVDPVTFDEAIQDEKWKIAMDQEIDAIRRNETWE 871

Query: 61  LMELPTNKQALGVNWIYRTKLKSNGNVEKYKARLVVKGYKQKYGVDYEKIFAPVTRIETI 120
           LMELPTNKQALGV W+YRTKLKS+GNVEKYKARLVVKGYKQ+YGVDYE+IFAPVTRIETI
Sbjct: 872 LMELPTNKQALGVKWVYRTKLKSDGNVEKYKARLVVKGYKQEYGVDYEEIFAPVTRIETI 931

[Close]

BLAST of Cmc09g0242571 vs. NCBI nr
Match: TYK30104.1 (integrase [Cucumis melo var. makuwa])

HSP 1 Score: 230.7 bits (587), Expect = 6.6e-57
Identity = 110/120 (91.67%), Postives = 117/120 (97.50%), Query Frame = 0


Query: 1   MRSIQEIYNATNKINDDHFAHFALFVGVDPVTFDEAIQDEKWKIAMDQEINAIRRNETWE 60
           MRSIQEIYN TN+INDDHFA+FALF GVDPVTFDEAIQDEKWKIAMDQEI+AIRRNETWE
Sbjct: 812 MRSIQEIYNTTNRINDDHFANFALFAGVDPVTFDEAIQDEKWKIAMDQEIDAIRRNETWE 871

Query: 61  LMELPTNKQALGVNWIYRTKLKSNGNVEKYKARLVVKGYKQKYGVDYEKIFAPVTRIETI 120
           LMELPTNKQALGV W+YRTKLKS+GNVEKYKARLVVKGYKQ+YGVDYE+IFAPVTRIETI
Sbjct: 872 LMELPTNKQALGVKWVYRTKLKSDGNVEKYKARLVVKGYKQEYGVDYEEIFAPVTRIETI 931

[Close]

BLAST of Cmc09g0242571 vs. NCBI nr
Match: KAA0039947.1 (integrase [Cucumis melo var. makuwa])

HSP 1 Score: 230.7 bits (587), Expect = 6.6e-57
Identity = 110/120 (91.67%), Postives = 117/120 (97.50%), Query Frame = 0


Query: 1   MRSIQEIYNATNKINDDHFAHFALFVGVDPVTFDEAIQDEKWKIAMDQEINAIRRNETWE 60
           MRSIQEIYN TN+INDDHFA+FALF GVDPVTFDEAIQDEKWKIAMDQEI+AIRRNETWE
Sbjct: 812 MRSIQEIYNTTNRINDDHFANFALFAGVDPVTFDEAIQDEKWKIAMDQEIDAIRRNETWE 871

Query: 61  LMELPTNKQALGVNWIYRTKLKSNGNVEKYKARLVVKGYKQKYGVDYEKIFAPVTRIETI 120
           LMELPTNKQALGV W+YRTKLKS+GNVEKYKARLVVKGYKQ+YGVDYE+IFAPVTRIETI
Sbjct: 872 LMELPTNKQALGVKWVYRTKLKSDGNVEKYKARLVVKGYKQEYGVDYEEIFAPVTRIETI 931

[Close]

BLAST of Cmc09g0242571 vs. ExPASy Swiss-Prot
Match: P92520 (Uncharacterized mitochondrial protein AtMg00820 OS=Arabidopsis thaliana OX=3702 GN=AtMg00820 PE=4 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 1.2e-16
Identity = 40/109 (36.70%), Postives = 68/109 (62.39%), Query Frame = 0


Query: 12  NKINDDHFAHFALFVGVDPVTFDEAIQDEKWKIAMDQEINAIRRNETWELMELPTNKQAL 71
           NK+N  +       +  +P +   A++D  W  AM +E++A+ RN+TW L+  P N+  L
Sbjct: 10  NKLNPKYSLTITTTIKKEPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNIL 69

Query: 72  GVNWIYRTKLKSNGNVEKYKARLVVKGYKQKYGVDYEKIFAPVTRIETI 121
           G  W+++TKL S+G +++ KARLV KG+ Q+ G+ + + ++PV R  TI
Sbjct: 70  GCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATI 118

[Close]

BLAST of Cmc09g0242571 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 1.7e-15
Identity = 43/109 (39.45%), Postives = 67/109 (61.47%), Query Frame = 0


Query: 13   KINDDHFAHFALFVGVDPVTFDEAIQDEKWKIAMDQEINAIRRNETWELM-ELPTNKQAL 72
            K N  +    +L    +P T  +A++DE+W+ AM  EINA   N TW+L+   P++   +
Sbjct: 939  KPNPKYSLAVSLAAESEPRTAIQALKDERWRNAMGSEINAQIGNHTWDLVPPPPSHVTIV 998

Query: 73   GVNWIYRTKLKSNGNVEKYKARLVVKGYKQKYGVDYEKIFAPVTRIETI 121
            G  WI+  K  S+G++ +YKARLV KGY Q+ G+DY + F+PV +  +I
Sbjct: 999  GCRWIFTKKYNSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSI 1047

[Close]

BLAST of Cmc09g0242571 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 4.9e-15
Identity = 42/109 (38.53%), Postives = 66/109 (60.55%), Query Frame = 0


Query: 13   KINDDHFAHFALFVGVDPVTFDEAIQDEKWKIAMDQEINAIRRNETWELM-ELPTNKQAL 72
            K N  +    +L    +P T  +A++D++W+ AM  EINA   N TW+L+   P +   +
Sbjct: 922  KPNQKYSYATSLAANSEPRTAIQAMKDDRWRQAMGSEINAQIGNHTWDLVPPPPPSVTIV 981

Query: 73   GVNWIYRTKLKSNGNVEKYKARLVVKGYKQKYGVDYEKIFAPVTRIETI 121
            G  WI+  K  S+G++ +YKARLV KGY Q+ G+DY + F+PV +  +I
Sbjct: 982  GCRWIFTKKFNSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSI 1030

[Close]

BLAST of Cmc09g0242571 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 81.6 bits (200), Expect = 6.5e-15
Identity = 40/93 (43.01%), Postives = 59/93 (63.44%), Query Frame = 0


Query: 30  PVTFDE-AIQDEK--WKIAMDQEINAIRRNETWELMELPTNKQALGVNWIYRTKLKSNGN 89
           P +FDE   +D+K  W+ A++ E+NA + N TW + + P NK  +   W++  K    GN
Sbjct: 891 PNSFDEIQYRDDKSSWEEAINTELNAHKINNTWTITKRPENKNIVDSRWVFSVKYNELGN 950

Query: 90  VEKYKARLVVKGYKQKYGVDYEKIFAPVTRIET 120
             +YKARLV +G+ QKY +DYE+ FAPV RI +
Sbjct: 951 PIRYKARLVARGFTQKYQIDYEETFAPVARISS 983

[Close]

BLAST of Cmc09g0242571 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 6.0e-13
Identity = 31/76 (40.79%), Postives = 57/76 (75.00%), Query Frame = 0


Query: 45  AMDQEINAIRRNETWELMELPTNKQALGVNWIYRTKLKSNGNVEKYKARLVVKGYKQKYG 104
           AM +E+ ++++N T++L+ELP  K+ L   W+++ K   +  + +YKARLVVKG++QK G
Sbjct: 829 AMQEEMESLQKNGTYKLVELPKGKRPLKCKWVFKLKKDGDCKLVRYKARLVVKGFEQKKG 888

Query: 105 VDYEKIFAPVTRIETI 121
           +D+++IF+PV ++ +I
Sbjct: 889 IDFDEIFSPVVKMTSI 904

[Close]

BLAST of Cmc09g0242571 vs. ExPASy TrEMBL
Match: A0A5D3DHS9 (Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold311G00370 PE=4 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 1.5e-59
Identity = 116/120 (96.67%), Postives = 118/120 (98.33%), Query Frame = 0


Query: 1   MRSIQEIYNATNKINDDHFAHFALFVGVDPVTFDEAIQDEKWKIAMDQEINAIRRNETWE 60
           +RSIQEIYNATN INDDHFAHFALFVGVDPVTFDEAIQDEKWKIAMDQEINAIRRNETWE
Sbjct: 406 IRSIQEIYNATNIINDDHFAHFALFVGVDPVTFDEAIQDEKWKIAMDQEINAIRRNETWE 465

Query: 61  LMELPTNKQALGVNWIYRTKLKSNGNVEKYKARLVVKGYKQKYGVDYEKIFAPVTRIETI 120
           LMELPTNKQALGVNWIYRTKLKSN NVEKYKARLVVKGYKQ+YGVDYEKIFAPVTRIETI
Sbjct: 466 LMELPTNKQALGVNWIYRTKLKSNDNVEKYKARLVVKGYKQEYGVDYEKIFAPVTRIETI 525

[Close]

BLAST of Cmc09g0242571 vs. ExPASy TrEMBL
Match: A0A5D3CLV1 (Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold132G00180 PE=4 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 3.2e-57
Identity = 110/120 (91.67%), Postives = 117/120 (97.50%), Query Frame = 0


Query: 1   MRSIQEIYNATNKINDDHFAHFALFVGVDPVTFDEAIQDEKWKIAMDQEINAIRRNETWE 60
           MRSIQEIYN TN+INDDHFA+FALF GVDPVTFDEAIQDEKWKIAMDQEI+AIRRNETWE
Sbjct: 812 MRSIQEIYNTTNRINDDHFANFALFAGVDPVTFDEAIQDEKWKIAMDQEIDAIRRNETWE 871

Query: 61  LMELPTNKQALGVNWIYRTKLKSNGNVEKYKARLVVKGYKQKYGVDYEKIFAPVTRIETI 120
           LMELPTNKQALGV W+YRTKLKS+GNVEKYKARLVVKGYKQ+YGVDYE+IFAPVTRIETI
Sbjct: 872 LMELPTNKQALGVKWVYRTKLKSDGNVEKYKARLVVKGYKQEYGVDYEEIFAPVTRIETI 931

[Close]

BLAST of Cmc09g0242571 vs. ExPASy TrEMBL
Match: A0A5D3BQ81 (Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G00890 PE=4 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 3.2e-57
Identity = 110/120 (91.67%), Postives = 117/120 (97.50%), Query Frame = 0


Query: 1   MRSIQEIYNATNKINDDHFAHFALFVGVDPVTFDEAIQDEKWKIAMDQEINAIRRNETWE 60
           MRSIQEIYN TN+INDDHFA+FALF GVDPVTFDEAIQDEKWKIAMDQEI+AIRRNETWE
Sbjct: 812 MRSIQEIYNTTNRINDDHFANFALFAGVDPVTFDEAIQDEKWKIAMDQEIDAIRRNETWE 871

Query: 61  LMELPTNKQALGVNWIYRTKLKSNGNVEKYKARLVVKGYKQKYGVDYEKIFAPVTRIETI 120
           LMELPTNKQALGV W+YRTKLKS+GNVEKYKARLVVKGYKQ+YGVDYE+IFAPVTRIETI
Sbjct: 872 LMELPTNKQALGVKWVYRTKLKSDGNVEKYKARLVVKGYKQEYGVDYEEIFAPVTRIETI 931

[Close]

BLAST of Cmc09g0242571 vs. ExPASy TrEMBL
Match: A0A5D3E3T2 (Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold156G00030 PE=4 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 3.2e-57
Identity = 110/120 (91.67%), Postives = 117/120 (97.50%), Query Frame = 0


Query: 1   MRSIQEIYNATNKINDDHFAHFALFVGVDPVTFDEAIQDEKWKIAMDQEINAIRRNETWE 60
           MRSIQEIYN TN+INDDHFA+FALF GVDPVTFDEAIQDEKWKIAMDQEI+AIRRNETWE
Sbjct: 812 MRSIQEIYNTTNRINDDHFANFALFAGVDPVTFDEAIQDEKWKIAMDQEIDAIRRNETWE 871

Query: 61  LMELPTNKQALGVNWIYRTKLKSNGNVEKYKARLVVKGYKQKYGVDYEKIFAPVTRIETI 120
           LMELPTNKQALGV W+YRTKLKS+GNVEKYKARLVVKGYKQ+YGVDYE+IFAPVTRIETI
Sbjct: 872 LMELPTNKQALGVKWVYRTKLKSDGNVEKYKARLVVKGYKQEYGVDYEEIFAPVTRIETI 931

[Close]

BLAST of Cmc09g0242571 vs. ExPASy TrEMBL
Match: A0A5A7UZJ8 (Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold98G001310 PE=4 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 3.2e-57
Identity = 110/120 (91.67%), Postives = 117/120 (97.50%), Query Frame = 0


Query: 1   MRSIQEIYNATNKINDDHFAHFALFVGVDPVTFDEAIQDEKWKIAMDQEINAIRRNETWE 60
           MRSIQEIYN TN+INDDHFA+FALF GVDPVTFDEAIQDEKWKIAMDQEI+AIRRNETWE
Sbjct: 812 MRSIQEIYNTTNRINDDHFANFALFAGVDPVTFDEAIQDEKWKIAMDQEIDAIRRNETWE 871

Query: 61  LMELPTNKQALGVNWIYRTKLKSNGNVEKYKARLVVKGYKQKYGVDYEKIFAPVTRIETI 120
           LMELPTNKQALGV W+YRTKLKS+GNVEKYKARLVVKGYKQ+YGVDYE+IFAPVTRIETI
Sbjct: 872 LMELPTNKQALGVKWVYRTKLKSDGNVEKYKARLVVKGYKQEYGVDYEEIFAPVTRIETI 931

[Close]

BLAST of Cmc09g0242571 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 93.2 bits (230), Expect = 1.5e-19
Identity = 40/92 (43.48%), Postives = 62/92 (67.39%), Query Frame = 0


Query: 29  DPVTFDEAIQDEKWKIAMDQEINAIRRNETWELMELPTNKQALGVNWIYRTKLKSNGNVE 88
           +P T++EA +   W  AMD EI A+    TWE+  LP NK+ +G  W+Y+ K  S+G +E
Sbjct: 85  EPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIE 144

Query: 89  KYKARLVVKGYKQKYGVDYEKIFAPVTRIETI 121
           +YKARLV KGY Q+ G+D+ + F+PV ++ ++
Sbjct: 145 RYKARLVAKGYTQQEGIDFIETFSPVCKLTSV 176

[Close]

BLAST of Cmc09g0242571 vs. TAIR 10
Match: ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )

HSP 1 Score: 87.4 bits (215), Expect = 8.4e-18
Identity = 40/109 (36.70%), Postives = 68/109 (62.39%), Query Frame = 0


Query: 12  NKINDDHFAHFALFVGVDPVTFDEAIQDEKWKIAMDQEINAIRRNETWELMELPTNKQAL 71
           NK+N  +       +  +P +   A++D  W  AM +E++A+ RN+TW L+  P N+  L
Sbjct: 10  NKLNPKYSLTITTTIKKEPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNIL 69

Query: 72  GVNWIYRTKLKSNGNVEKYKARLVVKGYKQKYGVDYEKIFAPVTRIETI 121
           G  W+++TKL S+G +++ KARLV KG+ Q+ G+ + + ++PV R  TI
Sbjct: 70  GCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATI 118

The following BLAST results are available for this feature:

BLAST of Cmc09g0242571 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0037654.1	3.1e-59	96.67	integrase [Cucumis melo var. makuwa] >TYK22799.1 integrase [Cucumis melo var. ma...	[more]
TYJ95504.1	6.6e-57	91.67	integrase [Cucumis melo var. makuwa] >TYK08522.1 integrase [Cucumis melo var. ma...	[more]
KAA0060377.1	6.6e-57	91.67	integrase [Cucumis melo var. makuwa]	[more]
TYK30104.1	6.6e-57	91.67	integrase [Cucumis melo var. makuwa]	[more]
KAA0039947.1	6.6e-57	91.67	integrase [Cucumis melo var. makuwa]	[more]

BLAST of Cmc09g0242571 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P92520	1.2e-16	36.70	Uncharacterized mitochondrial protein AtMg00820 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q94HW2	1.7e-15	39.45	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
Q9ZT94	4.9e-15	38.53	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
P04146	6.5e-15	43.01	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
P10978	6.0e-13	40.79	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]

BLAST of Cmc09g0242571 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DHS9	1.5e-59	96.67	Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold311G00370 PE=4...	[more]
A0A5D3CLV1	3.2e-57	91.67	Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold132G00180 PE=4...	[more]
A0A5D3BQ81	3.2e-57	91.67	Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G00890 PE=4...	[more]
A0A5D3E3T2	3.2e-57	91.67	Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold156G00030 PE=4...	[more]
A0A5A7UZJ8	3.2e-57	91.67	Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold98G001310 PE=4...	[more]

BLAST of Cmc09g0242571 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	1.5e-19	43.48	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00820.1	8.4e-18	36.70	Reverse transcriptase (RNA-dependent DNA polymerase)	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 56..120 e-value: 1.8E-17 score: 63.8
None	No IPR available	PANTHER	PTHR45895	FAMILY NOT NAMED	coord: 30..119

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc09g0242571.1	Cmc09g0242571.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006397	mRNA processing
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0008270	zinc ion binding