Cmc08g0230681 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc08g0230681
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	KH domain-containing protein
Location	CMiso1.1chr08: 26388651 .. 26394802 (+)
RNA-Seq Expression	Cmc08g0230681
Synteny	Cmc08g0230681

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAAAAAGAAATAAAATAAAAAAAGAAACTAAAAAGAAAAGAAAACGACGACCATTTACAATCATATATTTTCCTCAATTCAGTTTCCACCCTTTTACTCCTTAGCTCCGCCTCCGCCTCCCTCGTCGGAGTTGTCCTTATCCACCATCTTCTCCGGCGACATCCTCGCCTTTATCTCCAAAACCCCACTCCAACTTTCCAATCCCCCAATTCTCGGAACATCCATTTCAGCTCATAGTTCAATAGCTTACAGCTATGTCCGGTATGTACAGTACCAACTTCTCCCCTGCAAGAACTGCTTCTCCTCACATCAGAACTACTCCCGATGTCGACAGGTATCCCTTCTGATAACCCACTTCCCATAATTTCCCTTTTCTTCTTCTTTTGTTTAATTTAGGATTCCTGAAGTTTACTTAACTCGATAAAAAGTTGATTAATCGTTGAAAATCAATCCCCTTCTGGTTCTCTGTTATTTAATCTTTAGTCAGTACTTGTCGGAGCTACTAGCGGAGCATCAGAAGTTCGGCCCCTTCATGCAAGTTCTTCCGATCTGCGGCCGACTTTTGAATCAAGGTATTGTTCTTCTATGAATTTTTGGTGTTCTTGACCTTCATTAAGTGTTTAATTGTTGTGGTGATGTATATGTGTGTGTTTAGATCGGGGAAGCTGATAGGGGATTTTTTCCTTTTCCTCTTTAGTCTTAACAGCAATTGGTTGTTTTTGCCCTTGAGTTTGACTGTTGAGTTGTGCATATGTTAGTCAAGGATAAATTCTTTCACATTTTTTACTTGGGTTTTGTGGAATGTTTTTCTTTTTCTTTTGTTTTTTTTTTGGGGGGGGGGGGGGGGGGGGGGGGGGGGTTTGATTAATGATGATTCATCTGCCTTTTAAGTTTGTTTTTATCTTGTTTTCATTATGTGCTGAAGAAAGAAAAATGTGTGTCTTGGCAATTACTTCTTATCTTTCTTCAACTATTTGTTTTTTCTCTCTTTGAATTTCTTGTTCTATGTTAGTATACTATAAAAAGTTGCAAATTTCCCTTGAAAATATCATTGAAAAACATTTTTTTAAATACTAAAATGGGGTATTTCTTTAGTTTTATATTTAATAAGTCCTTCATTTGGAAAAAAAAAAAACGTTTCCATCGGAGTATTTCTTTAGTTTTATATTTAATAAGTCCTTCATTTGGAAAAAAAAACCGTTTCCATTAAGTTAATGTTTTATAAAACAAAAACTAAGAAATACATATGATATACATATGATAAAAAACGTTATCAAATGCATATCCTTTTTGAAATTAGGTGCAGGCAATGCAAATCAGTGAGAGAGGACATTATCTATCGAGCTTGTTATGCTAGAATGCTTGAGATACTAGGCTTGATTGTATATTTGTTGGGAAATGTCAATTTAATCTTTATAACTTTCACGTTTTTAAACTGAGCAGACATTTGCATATTGGTAACTATTGTTTTGACATGTGGTGTTTTCCTTGTTCTTCTAATTGGTTTTATACTCAGCATACCTCTGTAGGGTGCTCAATTCTTCTAGCATATGACGTCCCACTTGTTTATGCATATCCATCCTAGTAGAACTTTCTTCTTATAATTTGCAATTTCTTTTGTTCTAATTTATTTTTACAAAAATATTACTGGGGTATCATCACCGTGAACCAATAGACCATTGAAAGACTAAAAACCATGTCGCTACAGTAAGCTTCAGAAAGCAATTTTCAAGCCTTTCAAGTTATTGTGATTGGAGTCTATTTGAATTGAAGGTTAGGTCATCAAGTTTGATTTAGAATGATAGCAGCCAAACAATATGTCGATTCAAATTCATCATTTGGGTCATGCTGTAATCTCATGGTGACAACCTGTTTTTTTTTTGGTCAGTCATAATACCTTGGTCTGTGACATGAGAATTGACGGCTGGATGTTATTGTGGAAAATCTTTTCGAGGAAAGATATGTAGTAGTTTTACTAATCAATGTGCGAAACACATGATGCTTTCAGTCATTCTCCTATATGAGCTTCCTTGATTAGGATCTGTTCTTTAGGTTGTTCCTCTGGATTCCTGAGATCTAAGGTTACGACTTTAGTGCTATTTGAACTTCAGGAGTTCTCCTTGGAGTCTTTACCATATGAGAGTCATGTAATGTTCCAAGGCTCAAGTTTCAACCTCCGTTTAAATTGTCGAAGTGTGTTGATGAACCTTCATCCTGTCTGAGTGGTTAAGATATTTTTGCCCTTCCAAATTGATCTTGTTATAGAGTGCAGTTTTTTCTATAAGCATTCTTCTCTCTACTTAATGCACAAATATATTTCAATATCTTCCTTTCTATATATTTCTGCTTTTCAATTCTGTCAGCAACTTCTCACTCTATGCTCTCTAAATGCAGAAATATTGCGGGTTTCTGGAATGATGTCCAACCAGGGTTTCTGCGACCTTGATAGGCTTCGGCATAGGAGCCCTAGTCCAATGGCTTCTTCAAACCTTATGTCTAATGTTAGTAGTACAGGTTTGAGTGGCTGGAATGGTCTTCCTCAGGAGGTAATACTGTTTTTGCCTAATTTTGAGTCCAATTTTACTATGTTAGTAGTACAGGTTTGAGTGGCTGGAATGGTCTTCATTGGTAACTGGCTCCTGATACGTGATACCTATTTGTTCCTATAATTTTGAGTCTAAATTTACTATGTTTTAATATATGGACTGACATGCACATGCCGTAATTACAACATGATAGTTTGAAGGTAACATTGTAATGCTCCCTCTAAAGGAGGCTCCTACGACATAGCTTGAGTGATGCTAGGGATGTTGCAGTGTGCCGTTATTTATAGCTAATTACAAAAGTTTGTTTGTCACTTTTATTAAAATGAATTTTTGGGAACATAAGTGGTGAGAGAAGGAGCGACTTGATTTTGGCTTTGACTCTGTATTAGTTCTGGAATGGAATAGAACACATGTCCCATGAAATTGTTAGTTTCTTCTCCACTTTGTGGATTATCTTATTTTGCATGTTTGTTTGTTATCAATAAGACTGTTTCATTTTCCATATGATTGTAGTACCATTTAATTTGCTTATTGAGATCTTATCTGCTCTCATAGATGCCCATGTATTTAAGGTAAAAACGTGAAACCTCTCTCTCTCTCTCTCCCCCCCTCTCTCCTTACACGCACACACACATAGGGTAAGAGATTAAGGTTTCATGAAGAAAAATGAAGTATACAAGGGCATCCAAAAAAATGGCCCAATGAAGGAAGGGAATATGGATAAACTACAAAAAATGAAGCCTGCCTACGTTATGGTCCTATCATCTGGTGCACTTTACTAGCGCAGTAGCATGTAAAGTTCCAATCTTGAAAATCTCACTCTGGTGACTTCCTTCAGAAATGAAATGAGCAAGAGAGTATTGCTTTGACTTCTCCAATTTAGGCTTGTTATAATGATATTTTATTATTTCTTAGTTTGTTTGTGTGGGTGGTCAGAAAGTTGAAATACCACTACTTTAAAGAAAAAGTGGTCAGAAAGTTCTTTGTCAGTCTTGAGGGTTGCCTTGTACTGGTTGTCTTTTTTGGTCCTCCACATTAAAGTTCAACTGAAAGCATCATCTATAAGACCAAAGAGTTCCCATTTAGATGAAATGCCAAAAACTGATTAAAATATGTCAAGTATCTGTAGAAGTGTGTAAACAAATCCAGATAAGCCCAACGTTTCTTGCAAAAATTGGCTCTTACTGAAACCTAGTTAAGTTTTCATGTTCCCTTTCCATCTTCATTTTGGATCCCTGATTATTTTTTTTTATCATTGCATACTGATATCTCCTGTGATTCCAGTCCTCTTATATTCATTGAGAATTCTATCTATGTTAATTAGTCTTCTGGATGGTTATCCTTGGTTTGTTTTAGTTGTATTAAGATCTATAACTGTTTTGAAACATACAGAGATTAAGTAGAGCACCTGGGATGACAATGGACTGGCAAAGCGCACCTGCAAGTCCTAGTTCACTCACCGTAAAGAGGATTCTACGTTTGGAAATACCCGTTGATACTTATCCCAATGTGAGTTCTGTCAAAGCACAGATGTCTTTTTATTTCCCATCATATGCCACCTGTCCTGTCTGACTTGTATGTGCGCAAGGATATATATTAATACTTGAAGTTTCTGCTCTTTGTGGACAGTTCAATTTTGTAGGGCGGCTTTTGGGACCTCGTGGAAATTCCTTGAAACGAGTGGAAGTTACTACAGGTTGTCGTGTATACATTCGAGGGAAAGGGTCAATAAAGGATCCAGACAAGGTACTATATGGATATTGCTATTTTGGAACCGATATATGCCATTAACGCTGATTCATATGATGGATCTCTCAAGAGTCCGAGAGTAGTAAAGTGATATTGTGCTTCTTTCATTGGATTGTTATCATTCTGTTGAGTAGTAGTATTGGTTATAAATCGTTTTCTTACTTAATTTGTTAATCTTTTACATTATCAAGGAAGAAAAATTACGGGGACGACCTGGCTATGAGCACTTGAATGAACCGCTGCACATCTTGATTGAGGCAGATTTGCCAGCCAATGTTGTTGATATACGGCTCAGACAGGCACAAGAAATTATAGAAGAACTGCTCAAACCTGTGGTATGTTTTCGACCTTGGATATGCTTTTGGAATGCTTTAGGCTGGCCCAAATCAAAGTTTCCATGCTAAAAAGAACTTCACTATCAAAATCACCATCTTGTTAATTTTTTTTAACCAAAGTGATTTGTTAGGGAGCACTTGACAGCGTTTCCATATGCACCTTTATATTTACTCACTCGAGAGCTTTATAAGTAAGCGTGCATTTTTTAAAGAAGCTCCTGTGAAGTGCATTTTTACCAAAGTGATTGTTAGGGACCACTTGCAACCTCTCAAGAGTATAGAGAAACTATGGAAGTTATTTGTCATCACTGTTTGTTGAAGTGTTTAATGTTTTTGCTAAACATACTTATTTTAAATGTGGTCCAATACATACCTTTTTTTAGTTTTTTTTTTTTTTTCATATGCATGTGTAACCCACCTATCCCTACAACATTTAAGTGTCAAGAAAACTTGTAGGATATCAAGTCTGAGATAGGTGGCCTCCATGGATTGAACCCCTCTCTCTTAGCCCTTTATCATTAACACATGCCTTTTATTTACCATTAATCCAACTCATGATGGTTTAAAACCATTTTACTTGAGTTTTATTCTATTTATGTAGGTAAAACACACTGGTTTAACTATAAGTCATCTACTTGCTTACGATATTAAAGTTACTTTCAACCTCTCATGGATTTCTTGCATTTCTCATCCTTTGGTGTAGTTGATTCAGATTTTTCCTTTTTCTTTTCCCAGAACACGGTGTGTACTTACAAACCTTTGGTTCTTTTGGCATTTGAATAATCCATTTGCAGGATGAGAGTCATGATTACATTAAAAGGCAGCAGTTACGTGAACTCGCAATGCTAAATTCAAGTTTCAGAGAAGAGAGTCCAGGACCTGGTGGCAGCGTCTCTCCTTTCAACTCAAGTGGTATGAAACGTGCCAAAACAGGTCGGTAGGTGCTCAATATCATTCCGTACCATAAACAATTTCTACCCCAGTCCAAATTTCGGTCACTTATATACTGTGAAGTGAATCATGACCGACCGTGTGACATAGCTACGAGAAAGGGGAGGCTAACTTCAGTTCCTGGCGAGCCTTCTGTTGGCTTTTTTCTTTGTGTTCCCTTTAATATTCTTGACAGATAGACTGGAAAAAAGTTGAAAAAAAGAAAAAAAGAAAAAAAAAACAGGGGGTGAAAAGGAAAAAAAATTGTTAGTAATAGTAGGGATGGTTTTTCATGTTGGGTGTAGGTTTGAATAGGTCAGTTTTTCCAACAAAGTTAATATATTCATTGGATTTATTCTTGTGTTAGTGACTGCCGAGGAGTGTGTAGTTTTATTGCATTATTGATGCAAAAACCTTAGGAAGTGATGATGATGTAATACTATTTGATATTTGTTAGGTGTTGTATGCAATGTCAATGTCAATTATATTTTTGGACTGATATATGAAAGAACAATGCAAAAACTCATACAAAAGTGTTTGCTCAGTTTGTGTTTGCTTTTCAAGTTTCAGAATATGATTCTCCTTTCTGTC

mRNA sequence

AGAAAAAGAAATAAAATAAAAAAAGAAACTAAAAAGAAAAGAAAACGACGACCATTTACAATCATATATTTTCCTCAATTCAGTTTCCACCCTTTTACTCCTTAGCTCCGCCTCCGCCTCCCTCGTCGGAGTTGTCCTTATCCACCATCTTCTCCGGCGACATCCTCGCCTTTATCTCCAAAACCCCACTCCAACTTTCCAATCCCCCAATTCTCGGAACATCCATTTCAGCTCATAGTTCAATAGCTTACAGCTATGTCCGGTATGTACAGTACCAACTTCTCCCCTGCAAGAACTGCTTCTCCTCACATCAGAACTACTCCCGATGTCGACAGTCAGTACTTGTCGGAGCTACTAGCGGAGCATCAGAAGTTCGGCCCCTTCATGCAAGTTCTTCCGATCTGCGGCCGACTTTTGAATCAAGAAATATTGCGGGTTTCTGGAATGATGTCCAACCAGGGTTTCTGCGACCTTGATAGGCTTCGGCATAGGAGCCCTAGTCCAATGGCTTCTTCAAACCTTATGTCTAATGTTAGTAGTACAGGTTTGAGTGGCTGGAATGGTCTTCCTCAGGAGAGATTAAGTAGAGCACCTGGGATGACAATGGACTGGCAAAGCGCACCTGCAAGTCCTAGTTCACTCACCGTAAAGAGGATTCTACGTTTGGAAATACCCGTTGATACTTATCCCAATTTCAATTTTGTAGGGCGGCTTTTGGGACCTCGTGGAAATTCCTTGAAACGAGTGGAAGTTACTACAGGTTGTCGTGTATACATTCGAGGGAAAGGGTCAATAAAGGATCCAGACAAGGAAGAAAAATTACGGGGACGACCTGGCTATGAGCACTTGAATGAACCGCTGCACATCTTGATTGAGGCAGATTTGCCAGCCAATGTTGTTGATATACGGCTCAGACAGGCACAAGAAATTATAGAAGAACTGCTCAAACCTGTGGATGAGAGTCATGATTACATTAAAAGGCAGCAGTTACGTGAACTCGCAATGCTAAATTCAAGTTTCAGAGAAGAGAGTCCAGGACCTGGTGGCAGCGTCTCTCCTTTCAACTCAAGTGGTATGAAACGTGCCAAAACAGGTCGGTAGGTGCTCAATATCATTCCGTACCATAAACAATTTCTACCCCAGTCCAAATTTCGGTCACTTATATACTGTGAAGTGAATCATGACCGACCGTGTGACATAGCTACGAGAAAGGGGAGGCTAACTTCAGTTCCTGGCGAGCCTTCTGTTGGCTTTTTTCTTTGTGTTCCCTTTAATATTCTTGACAGATAGACTGGAAAAAAGTTGAAAAAAAGAAAAAAAGAAAAAAAAAACAGGGGGTGAAAAGGAAAAAAAATTGTTAGTAATAGTAGGGATGGTTTTTCATGTTGGGTGTAGGTTTGAATAGGTCAGTTTTTCCAACAAAGTTAATATATTCATTGGATTTATTCTTGTGTTAGTGACTGCCGAGGAGTGTGTAGTTTTATTGCATTATTGATGCAAAAACCTTAGGAAGTGATGATGATGTAATACTATTTGATATTTGTTAGGTGTTGTATGCAATGTCAATGTCAATTATATTTTTGGACTGATATATGAAAGAACAATGCAAAAACTCATACAAAAGTGTTTGCTCAGTTTGTGTTTGCTTTTCAAGTTTCAGAATATGATTCTCCTTTCTGTC

Coding sequence (CDS)

ATGTCCGGTATGTACAGTACCAACTTCTCCCCTGCAAGAACTGCTTCTCCTCACATCAGAACTACTCCCGATGTCGACAGTCAGTACTTGTCGGAGCTACTAGCGGAGCATCAGAAGTTCGGCCCCTTCATGCAAGTTCTTCCGATCTGCGGCCGACTTTTGAATCAAGAAATATTGCGGGTTTCTGGAATGATGTCCAACCAGGGTTTCTGCGACCTTGATAGGCTTCGGCATAGGAGCCCTAGTCCAATGGCTTCTTCAAACCTTATGTCTAATGTTAGTAGTACAGGTTTGAGTGGCTGGAATGGTCTTCCTCAGGAGAGATTAAGTAGAGCACCTGGGATGACAATGGACTGGCAAAGCGCACCTGCAAGTCCTAGTTCACTCACCGTAAAGAGGATTCTACGTTTGGAAATACCCGTTGATACTTATCCCAATTTCAATTTTGTAGGGCGGCTTTTGGGACCTCGTGGAAATTCCTTGAAACGAGTGGAAGTTACTACAGGTTGTCGTGTATACATTCGAGGGAAAGGGTCAATAAAGGATCCAGACAAGGAAGAAAAATTACGGGGACGACCTGGCTATGAGCACTTGAATGAACCGCTGCACATCTTGATTGAGGCAGATTTGCCAGCCAATGTTGTTGATATACGGCTCAGACAGGCACAAGAAATTATAGAAGAACTGCTCAAACCTGTGGATGAGAGTCATGATTACATTAAAAGGCAGCAGTTACGTGAACTCGCAATGCTAAATTCAAGTTTCAGAGAAGAGAGTCCAGGACCTGGTGGCAGCGTCTCTCCTTTCAACTCAAGTGGTATGAAACGTGCCAAAACAGGTCGGTAG

Protein sequence

MSGMYSTNFSPARTASPHIRTTPDVDSQYLSELLAEHQKFGPFMQVLPICGRLLNQEILRVSGMMSNQGFCDLDRLRHRSPSPMASSNLMSNVSSTGLSGWNGLPQERLSRAPGMTMDWQSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESHDYIKRQQLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKTGR

Homology

[Close]

BLAST of Cmc08g0230681 vs. NCBI nr
Match: XP_008463293.1 (PREDICTED: KH domain-containing protein At2g38610 [Cucumis melo])

HSP 1 Score: 563.1 bits (1450), Expect = 1.3e-156
Identity = 281/281 (100.00%), Postives = 281/281 (100.00%), Query Frame = 0


Query: 1   MSGMYSTNFSPARTASPHIRTTPDVDSQYLSELLAEHQKFGPFMQVLPICGRLLNQEILR 60
           MSGMYSTNFSPARTASPHIRTTPDVDSQYLSELLAEHQKFGPFMQVLPICGRLLNQEILR
Sbjct: 1   MSGMYSTNFSPARTASPHIRTTPDVDSQYLSELLAEHQKFGPFMQVLPICGRLLNQEILR 60

Query: 61  VSGMMSNQGFCDLDRLRHRSPSPMASSNLMSNVSSTGLSGWNGLPQERLSRAPGMTMDWQ 120
           VSGMMSNQGFCDLDRLRHRSPSPMASSNLMSNVSSTGLSGWNGLPQERLSRAPGMTMDWQ
Sbjct: 61  VSGMMSNQGFCDLDRLRHRSPSPMASSNLMSNVSSTGLSGWNGLPQERLSRAPGMTMDWQ 120

Query: 121 SAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGSI 180
           SAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGSI
Sbjct: 121 SAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGSI 180

Query: 181 KDPDKEEKLRGRPGYEHLNEPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESHDYI 240
           KDPDKEEKLRGRPGYEHLNEPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESHDYI
Sbjct: 181 KDPDKEEKLRGRPGYEHLNEPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESHDYI 240

Query: 241 KRQQLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKTGR 282
           KRQQLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKTGR
Sbjct: 241 KRQQLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKTGR 281

[Close]

BLAST of Cmc08g0230681 vs. NCBI nr
Match: XP_004142668.1 (KH domain-containing protein At2g38610 isoform X2 [Cucumis sativus])

HSP 1 Score: 562.0 bits (1447), Expect = 2.9e-156
Identity = 280/281 (99.64%), Postives = 281/281 (100.00%), Query Frame = 0


Query: 1   MSGMYSTNFSPARTASPHIRTTPDVDSQYLSELLAEHQKFGPFMQVLPICGRLLNQEILR 60
           MSGMYSTNFSPARTASPHIRTTPDVDSQYLSELLAEHQKFGPFMQVLPICGRLLNQEILR
Sbjct: 1   MSGMYSTNFSPARTASPHIRTTPDVDSQYLSELLAEHQKFGPFMQVLPICGRLLNQEILR 60

Query: 61  VSGMMSNQGFCDLDRLRHRSPSPMASSNLMSNVSSTGLSGWNGLPQERLSRAPGMTMDWQ 120
           VSGMMSNQGFCDLDRLRHRSPSPMASSNLM+NVSSTGLSGWNGLPQERLSRAPGMTMDWQ
Sbjct: 61  VSGMMSNQGFCDLDRLRHRSPSPMASSNLMTNVSSTGLSGWNGLPQERLSRAPGMTMDWQ 120

Query: 121 SAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGSI 180
           SAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGSI
Sbjct: 121 SAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGSI 180

Query: 181 KDPDKEEKLRGRPGYEHLNEPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESHDYI 240
           KDPDKEEKLRGRPGYEHLNEPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESHDYI
Sbjct: 181 KDPDKEEKLRGRPGYEHLNEPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESHDYI 240

Query: 241 KRQQLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKTGR 282
           KRQQLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKTGR
Sbjct: 241 KRQQLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKTGR 281

[Close]

BLAST of Cmc08g0230681 vs. NCBI nr
Match: TYK06218.1 (KH domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 557.8 bits (1436), Expect = 5.5e-155
Identity = 278/278 (100.00%), Postives = 278/278 (100.00%), Query Frame = 0


Query: 4   MYSTNFSPARTASPHIRTTPDVDSQYLSELLAEHQKFGPFMQVLPICGRLLNQEILRVSG 63
           MYSTNFSPARTASPHIRTTPDVDSQYLSELLAEHQKFGPFMQVLPICGRLLNQEILRVSG
Sbjct: 1   MYSTNFSPARTASPHIRTTPDVDSQYLSELLAEHQKFGPFMQVLPICGRLLNQEILRVSG 60

Query: 64  MMSNQGFCDLDRLRHRSPSPMASSNLMSNVSSTGLSGWNGLPQERLSRAPGMTMDWQSAP 123
           MMSNQGFCDLDRLRHRSPSPMASSNLMSNVSSTGLSGWNGLPQERLSRAPGMTMDWQSAP
Sbjct: 61  MMSNQGFCDLDRLRHRSPSPMASSNLMSNVSSTGLSGWNGLPQERLSRAPGMTMDWQSAP 120

Query: 124 ASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGSIKDP 183
           ASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGSIKDP
Sbjct: 121 ASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGSIKDP 180

Query: 184 DKEEKLRGRPGYEHLNEPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESHDYIKRQ 243
           DKEEKLRGRPGYEHLNEPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESHDYIKRQ
Sbjct: 181 DKEEKLRGRPGYEHLNEPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESHDYIKRQ 240

Query: 244 QLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKTGR 282
           QLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKTGR
Sbjct: 241 QLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKTGR 278

[Close]

BLAST of Cmc08g0230681 vs. NCBI nr
Match: XP_011653733.1 (KH domain-containing protein At2g38610 isoform X1 [Cucumis sativus] >KAE8649596.1 hypothetical protein Csa_012547 [Cucumis sativus])

HSP 1 Score: 557.4 bits (1435), Expect = 7.2e-155
Identity = 280/282 (99.29%), Postives = 281/282 (99.65%), Query Frame = 0


Query: 1   MSGMYSTNFSPARTASPHIRTTPDVDSQYLSELLAEHQKFGPFMQVLPICGRLLNQEILR 60
           MSGMYSTNFSPARTASPHIRTTPDVDSQYLSELLAEHQKFGPFMQVLPICGRLLNQEILR
Sbjct: 1   MSGMYSTNFSPARTASPHIRTTPDVDSQYLSELLAEHQKFGPFMQVLPICGRLLNQEILR 60

Query: 61  VSGMMSNQGFCDLDRLRHRSPSPMASSNLMSNVSSTGLSGWNGLPQE-RLSRAPGMTMDW 120
           VSGMMSNQGFCDLDRLRHRSPSPMASSNLM+NVSSTGLSGWNGLPQE RLSRAPGMTMDW
Sbjct: 61  VSGMMSNQGFCDLDRLRHRSPSPMASSNLMTNVSSTGLSGWNGLPQEQRLSRAPGMTMDW 120

Query: 121 QSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGS 180
           QSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGS
Sbjct: 121 QSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGS 180

Query: 181 IKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESHDY 240
           IKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESHDY
Sbjct: 181 IKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESHDY 240

Query: 241 IKRQQLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKTGR 282
           IKRQQLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKTGR
Sbjct: 241 IKRQQLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKTGR 282

[Close]

BLAST of Cmc08g0230681 vs. NCBI nr
Match: XP_038882688.1 (KH domain-containing protein At2g38610 isoform X2 [Benincasa hispida])

HSP 1 Score: 555.8 bits (1431), Expect = 2.1e-154
Identity = 278/281 (98.93%), Postives = 280/281 (99.64%), Query Frame = 0


Query: 1   MSGMYSTNFSPARTASPHIRTTPDVDSQYLSELLAEHQKFGPFMQVLPICGRLLNQEILR 60
           MSGMYSTNFSPARTASPHIRTTPDVDSQYLSELLAEHQKFGPFMQVLPICGRLLNQEILR
Sbjct: 1   MSGMYSTNFSPARTASPHIRTTPDVDSQYLSELLAEHQKFGPFMQVLPICGRLLNQEILR 60

Query: 61  VSGMMSNQGFCDLDRLRHRSPSPMASSNLMSNVSSTGLSGWNGLPQERLSRAPGMTMDWQ 120
           VSGMMSNQGFCDLDRLRHRSPSPMAS+NLMSNV STGLSGWNGLPQERLSRAPGMTMDWQ
Sbjct: 61  VSGMMSNQGFCDLDRLRHRSPSPMASANLMSNV-STGLSGWNGLPQERLSRAPGMTMDWQ 120

Query: 121 SAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGSI 180
           SAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGSI
Sbjct: 121 SAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGSI 180

Query: 181 KDPDKEEKLRGRPGYEHLNEPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESHDYI 240
           KDPDKEEKLRGRPGYEHLNEPLHILIEADLPAN+VDIRLRQAQEIIEELLKPVDESHDYI
Sbjct: 181 KDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIRLRQAQEIIEELLKPVDESHDYI 240

Query: 241 KRQQLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKTGR 282
           KRQQLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKTGR
Sbjct: 241 KRQQLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKTGR 280

[Close]

BLAST of Cmc08g0230681 vs. ExPASy Swiss-Prot
Match: Q9ZVI3 (KH domain-containing protein At2g38610 OS=Arabidopsis thaliana OX=3702 GN=At2g38610 PE=1 SV=1)

HSP 1 Score: 462.6 bits (1189), Expect = 3.2e-129
Identity = 240/286 (83.92%), Postives = 257/286 (89.86%), Query Frame = 0


Query: 1   MSGMY--STNFSPARTASPHIRTTPDVD-SQYLSELLAEHQKFGPFMQVLPICGRLLNQE 60
           MSG+Y  S+ FSPAR ASP IR+TP++D SQYL+ELLAEHQK  PFMQVLPIC RLLNQE
Sbjct: 1   MSGLYNNSSYFSPARAASPQIRSTPEIDSSQYLTELLAEHQKLTPFMQVLPICSRLLNQE 60

Query: 61  ILRVSGMMSNQGFCDLDRLRHRSPSPMASSNLMSNVSSTGLSGWNGLPQERLSRAPGMTM 120
           + RVSGMMSNQGF D DRLRHRSPSPMASSNLMSNVS+TGL GWNGL QERLS  PGMTM
Sbjct: 61  MFRVSGMMSNQGFGDFDRLRHRSPSPMASSNLMSNVSNTGLGGWNGLSQERLSGTPGMTM 120

Query: 121 DWQSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGK 180
           DWQ AP SPSS TVKRILRLEIPVD YPNFNFVGRLLGPRGNSLKRVE TTGCRV+IRGK
Sbjct: 121 DWQGAPGSPSSYTVKRILRLEIPVDNYPNFNFVGRLLGPRGNSLKRVEATTGCRVFIRGK 180

Query: 181 GSIKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESH 240
           GSIKDP+KE+KLRGRPGYEHLNE LHILIEADLPA++V+IRLRQAQEIIEELLKPVDES 
Sbjct: 181 GSIKDPEKEDKLRGRPGYEHLNEQLHILIEADLPASIVEIRLRQAQEIIEELLKPVDESQ 240

Query: 241 DYIKRQQLRELAMLNS-SFREESPGP--GGSVSPFNSSGMKRAKTG 281
           D+IKRQQLRELA+LNS + REESPGP  GGSVSPFNSSG KR KTG
Sbjct: 241 DFIKRQQLRELALLNSNNLREESPGPSGGGSVSPFNSSG-KRPKTG 285

[Close]

BLAST of Cmc08g0230681 vs. ExPASy Swiss-Prot
Match: Q8GYR4 (KH domain-containing protein At3g08620 OS=Arabidopsis thaliana OX=3702 GN=At3g08620 PE=2 SV=1)

HSP 1 Score: 458.0 bits (1177), Expect = 7.8e-128
Identity = 227/283 (80.21%), Postives = 249/283 (87.99%), Query Frame = 0


Query: 1   MSGMYS-TNFSPARTASPHIRT-TPDVDSQYLSELLAEHQKFGPFMQVLPICGRLLNQEI 60
           MSG+Y+  NFSP+R ASP IRT + DVDSQY+S+LLAEHQK GPFMQVLPIC RLLNQEI
Sbjct: 1   MSGLYNYNNFSPSRAASPQIRTPSSDVDSQYISQLLAEHQKLGPFMQVLPICSRLLNQEI 60

Query: 61  LRVSGMMSNQGFCDLDRLRHRSPSPMASSNLMSNVSSTGLSGWNGLPQERLSRAPGMTMD 120
            R++GMM NQGF D DRLRHRSPSPMAS NLMSNVS  GL GWNGLP ER+    GM M+
Sbjct: 61  FRITGMMPNQGFTDFDRLRHRSPSPMASPNLMSNVSGGGLGGWNGLPPERIGGPHGMAME 120

Query: 121 WQSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKG 180
           WQ APASPSS  VKRILRL++PVDTYPNFNFVGRLLGPRGNSLKRVE TTGCRVYIRGKG
Sbjct: 121 WQGAPASPSSYPVKRILRLDLPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKG 180

Query: 181 SIKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESHD 240
           SIKDP+KEEKL+G+PGYEHLNE LHILIEADLP ++VDI+LRQAQEIIEEL+KPVDES D
Sbjct: 181 SIKDPEKEEKLKGKPGYEHLNEQLHILIEADLPIDIVDIKLRQAQEIIEELVKPVDESQD 240

Query: 241 YIKRQQLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKTGR 282
           YIKRQQLRELA+LNS+ RE SPGP GSVSPFNS+ MKR KTGR
Sbjct: 241 YIKRQQLRELALLNSNLRENSPGPSGSVSPFNSNAMKRPKTGR 283

[Close]

BLAST of Cmc08g0230681 vs. ExPASy Swiss-Prot
Match: Q75GR5 (KH domain-containing protein SPIN1 OS=Oryza sativa subsp. japonica OX=39947 GN=SPIN1 PE=1 SV=1)

HSP 1 Score: 412.5 bits (1059), Expect = 3.7e-114
Identity = 205/282 (72.70%), Postives = 237/282 (84.04%), Query Frame = 0


Query: 1   MSGMYSTNFSPARTASPHIRTTP-DVDSQYLSELLAEHQKFGPFMQVLPICGRLLNQEIL 60
           MSG+YS  FSPAR  SP IR+ P DVDSQYL+ELLAEHQK GPFMQVLPIC +LL+QEI+
Sbjct: 1   MSGLYSPGFSPARNLSPQIRSNPTDVDSQYLAELLAEHQKLGPFMQVLPICSKLLSQEIM 60

Query: 61  RVSGMMSNQGFCDLDRLRHRSPSPMASSNLMSNVSSTGLSGWNGLPQERLSRAPGMTMDW 120
           RVS ++ N GF D DR R RSPSPM+S N  SN S  G S WNGL QERL    G +MDW
Sbjct: 61  RVSSIVHNHGFGDFDRHRFRSPSPMSSPNPRSNRSGNGFSPWNGLHQERLGFPQGTSMDW 120

Query: 121 QSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGS 180
           Q AP SPSS  VK+ILRL++PVD+YPNFNFVGR+LGPRGNSLKRVE +TGCRV+IRGKGS
Sbjct: 121 QGAPPSPSSHVVKKILRLDVPVDSYPNFNFVGRILGPRGNSLKRVEASTGCRVFIRGKGS 180

Query: 181 IKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESHDY 240
           IKDP KE+KLRG+PGYEHL++PLHILIEA+ PA+++D RLR AQE+IEELLKPVDES D+
Sbjct: 181 IKDPGKEDKLRGKPGYEHLSDPLHILIEAEFPASIIDARLRHAQEVIEELLKPVDESQDF 240

Query: 241 IKRQQLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKTGR 282
            KRQQLRELAMLNS+ RE+SP P GSVSPF++ GMKRAKTG+
Sbjct: 241 YKRQQLRELAMLNSTLREDSPHP-GSVSPFSNGGMKRAKTGQ 281

[Close]

BLAST of Cmc08g0230681 vs. ExPASy Swiss-Prot
Match: Q0WLR1 (KH domain-containing protein At4g26480 OS=Arabidopsis thaliana OX=3702 GN=At4g26480 PE=2 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 4.8e-77
Identity = 155/279 (55.56%), Postives = 196/279 (70.25%), Query Frame = 0


Query: 2   SGMYSTNFSPARTASPHIRTTPDVDSQYLSELLAEHQKFGPFMQVLPICGRLLNQEILRV 61
           S   S NFS    + P      +   +YLSELLAE  K  PF+ VLP   RL+NQEILRV
Sbjct: 37  SAPQSPNFSGGLRSQPSFLVEQE---KYLSELLAERHKLTPFLPVLPHVCRLMNQEILRV 96

Query: 62  SGMMSNQGFCDLDRLRHRSPSPMASSNLMSNVSSTGLSGW-NGLPQERLSRAPGMTMDWQ 121
           + ++ N     L + R   PSP+AS  +  N S   ++GW +  P ER S +     +W 
Sbjct: 97  TTLLENA----LSQSRFDHPSPLASGGIFQN-SRADMNGWASQFPSER-SVSSSPAPNWL 156

Query: 122 SAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGSI 181
           ++P S S L VKR +R++IPVD YPN+NFVGRLLGPRGNSLKRVE +T CRV IRG+GSI
Sbjct: 157 NSPGSSSGLIVKRTIRVDIPVDKYPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSI 216

Query: 182 KDPDKEEKLRGRPGYEHLNEPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESHDYI 241
           KDP KE+ +RG+PGYEHLNEPLHIL+EA+LP  +VD RL QA+EI+++LL PV+E+HD+ 
Sbjct: 217 KDPIKEDMMRGKPGYEHLNEPLHILVEAELPIEIVDARLMQAREILDDLLTPVEETHDFY 276

Query: 242 KRQQLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKT 280
           K+QQLRELA+LN S REE     GS+SP+NS GMKRAKT
Sbjct: 277 KKQQLRELALLNGSLREEGSPMSGSISPYNSLGMKRAKT 306

[Close]

BLAST of Cmc08g0230681 vs. ExPASy Swiss-Prot
Match: Q9FKT4 (KH domain-containing protein At5g56140 OS=Arabidopsis thaliana OX=3702 GN=At5g56140 PE=2 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 3.1e-76
Identity = 158/286 (55.24%), Postives = 201/286 (70.28%), Query Frame = 0


Query: 5   YSTNFS--PARTASPH----IRTTPDV---DSQYLSELLAEHQKFGPFMQVLPICGRLLN 64
           YS++ S  P+   SP+    +R+   V     +YLSELLAE  K  PF+ VLP   RLLN
Sbjct: 32  YSSSLSVPPSAPQSPNYSGGLRSQSSVFVEQEKYLSELLAERHKLTPFLPVLPHAFRLLN 91

Query: 65  QEILRVSGMMSNQGFCDLDRLRHRSPSPMASSNLMSNVSSTGLSGW-NGLPQER-LSRAP 124
           QEILRV+ ++ N        L H  PSP+AS  +  N +   ++GW +  P ER +  +P
Sbjct: 92  QEILRVTTLLENATVLSQSGLDH--PSPLASGGIFQN-ARADMNGWASQFPSERSVPSSP 151

Query: 125 GMTMDWQSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVY 184
           G   +W ++P S S L  KR +R++IPVD YPNFNFVGRLLGPRGNSLKRVE +T CRV 
Sbjct: 152 G--PNWLNSPGSSSGLIAKRTIRVDIPVDNYPNFNFVGRLLGPRGNSLKRVEASTDCRVL 211

Query: 185 IRGKGSIKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANVVDIRLRQAQEIIEELLKPV 244
           IRG+GSIKDP KEE +RG+PGYEHLNEPLHIL+EA+LP  +VD RL QA+EI+++LL P+
Sbjct: 212 IRGRGSIKDPIKEEMMRGKPGYEHLNEPLHILVEAELPIEIVDARLMQAREILDDLLTPM 271

Query: 245 DESHDYIKRQQLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKT 280
           +E+HD  K+QQLRELA+LN + REE     GSVSP+NS GMKRAKT
Sbjct: 272 EETHDMYKKQQLRELALLNGTLREEGSPMSGSVSPYNSLGMKRAKT 312

[Close]

BLAST of Cmc08g0230681 vs. ExPASy TrEMBL
Match: A0A1S3CIV3 (KH domain-containing protein At2g38610 OS=Cucumis melo OX=3656 GN=LOC103501485 PE=4 SV=1)

HSP 1 Score: 563.1 bits (1450), Expect = 6.3e-157
Identity = 281/281 (100.00%), Postives = 281/281 (100.00%), Query Frame = 0


Query: 1   MSGMYSTNFSPARTASPHIRTTPDVDSQYLSELLAEHQKFGPFMQVLPICGRLLNQEILR 60
           MSGMYSTNFSPARTASPHIRTTPDVDSQYLSELLAEHQKFGPFMQVLPICGRLLNQEILR
Sbjct: 1   MSGMYSTNFSPARTASPHIRTTPDVDSQYLSELLAEHQKFGPFMQVLPICGRLLNQEILR 60

Query: 61  VSGMMSNQGFCDLDRLRHRSPSPMASSNLMSNVSSTGLSGWNGLPQERLSRAPGMTMDWQ 120
           VSGMMSNQGFCDLDRLRHRSPSPMASSNLMSNVSSTGLSGWNGLPQERLSRAPGMTMDWQ
Sbjct: 61  VSGMMSNQGFCDLDRLRHRSPSPMASSNLMSNVSSTGLSGWNGLPQERLSRAPGMTMDWQ 120

Query: 121 SAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGSI 180
           SAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGSI
Sbjct: 121 SAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGSI 180

Query: 181 KDPDKEEKLRGRPGYEHLNEPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESHDYI 240
           KDPDKEEKLRGRPGYEHLNEPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESHDYI
Sbjct: 181 KDPDKEEKLRGRPGYEHLNEPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESHDYI 240

Query: 241 KRQQLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKTGR 282
           KRQQLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKTGR
Sbjct: 241 KRQQLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKTGR 281

[Close]

BLAST of Cmc08g0230681 vs. ExPASy TrEMBL
Match: A0A0A0KXW7 (KH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G337270 PE=4 SV=1)

HSP 1 Score: 562.0 bits (1447), Expect = 1.4e-156
Identity = 280/281 (99.64%), Postives = 281/281 (100.00%), Query Frame = 0


Query: 1   MSGMYSTNFSPARTASPHIRTTPDVDSQYLSELLAEHQKFGPFMQVLPICGRLLNQEILR 60
           MSGMYSTNFSPARTASPHIRTTPDVDSQYLSELLAEHQKFGPFMQVLPICGRLLNQEILR
Sbjct: 1   MSGMYSTNFSPARTASPHIRTTPDVDSQYLSELLAEHQKFGPFMQVLPICGRLLNQEILR 60

Query: 61  VSGMMSNQGFCDLDRLRHRSPSPMASSNLMSNVSSTGLSGWNGLPQERLSRAPGMTMDWQ 120
           VSGMMSNQGFCDLDRLRHRSPSPMASSNLM+NVSSTGLSGWNGLPQERLSRAPGMTMDWQ
Sbjct: 61  VSGMMSNQGFCDLDRLRHRSPSPMASSNLMTNVSSTGLSGWNGLPQERLSRAPGMTMDWQ 120

Query: 121 SAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGSI 180
           SAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGSI
Sbjct: 121 SAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGSI 180

Query: 181 KDPDKEEKLRGRPGYEHLNEPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESHDYI 240
           KDPDKEEKLRGRPGYEHLNEPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESHDYI
Sbjct: 181 KDPDKEEKLRGRPGYEHLNEPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESHDYI 240

Query: 241 KRQQLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKTGR 282
           KRQQLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKTGR
Sbjct: 241 KRQQLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKTGR 281

[Close]

BLAST of Cmc08g0230681 vs. ExPASy TrEMBL
Match: A0A5D3C4T5 (KH domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold287G00820 PE=4 SV=1)

HSP 1 Score: 557.8 bits (1436), Expect = 2.7e-155
Identity = 278/278 (100.00%), Postives = 278/278 (100.00%), Query Frame = 0


Query: 4   MYSTNFSPARTASPHIRTTPDVDSQYLSELLAEHQKFGPFMQVLPICGRLLNQEILRVSG 63
           MYSTNFSPARTASPHIRTTPDVDSQYLSELLAEHQKFGPFMQVLPICGRLLNQEILRVSG
Sbjct: 1   MYSTNFSPARTASPHIRTTPDVDSQYLSELLAEHQKFGPFMQVLPICGRLLNQEILRVSG 60

Query: 64  MMSNQGFCDLDRLRHRSPSPMASSNLMSNVSSTGLSGWNGLPQERLSRAPGMTMDWQSAP 123
           MMSNQGFCDLDRLRHRSPSPMASSNLMSNVSSTGLSGWNGLPQERLSRAPGMTMDWQSAP
Sbjct: 61  MMSNQGFCDLDRLRHRSPSPMASSNLMSNVSSTGLSGWNGLPQERLSRAPGMTMDWQSAP 120

Query: 124 ASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGSIKDP 183
           ASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGSIKDP
Sbjct: 121 ASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGSIKDP 180

Query: 184 DKEEKLRGRPGYEHLNEPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESHDYIKRQ 243
           DKEEKLRGRPGYEHLNEPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESHDYIKRQ
Sbjct: 181 DKEEKLRGRPGYEHLNEPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESHDYIKRQ 240

Query: 244 QLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKTGR 282
           QLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKTGR
Sbjct: 241 QLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKTGR 278

[Close]

BLAST of Cmc08g0230681 vs. ExPASy TrEMBL
Match: A0A6J1EEN1 (KH domain-containing protein At3g08620-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111432543 PE=4 SV=1)

HSP 1 Score: 552.0 bits (1421), Expect = 1.5e-153
Identity = 274/281 (97.51%), Postives = 276/281 (98.22%), Query Frame = 0


Query: 1   MSGMYSTNFSPARTASPHIRTTPDVDSQYLSELLAEHQKFGPFMQVLPICGRLLNQEILR 60
           MSGMYSTNFSPARTASPHIRTTPDVDSQYLSELLAEHQKFGPFMQVLPIC RLLNQEILR
Sbjct: 1   MSGMYSTNFSPARTASPHIRTTPDVDSQYLSELLAEHQKFGPFMQVLPICSRLLNQEILR 60

Query: 61  VSGMMSNQGFCDLDRLRHRSPSPMASSNLMSNVSSTGLSGWNGLPQERLSRAPGMTMDWQ 120
           VSGMMSNQGFCDLDRLRHRSPSPMASSNL+SNVSS GLSGWNGLPQERLSR PGMTMDWQ
Sbjct: 61  VSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSSAGLSGWNGLPQERLSRPPGMTMDWQ 120

Query: 121 SAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGSI 180
           SAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGSI
Sbjct: 121 SAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGSI 180

Query: 181 KDPDKEEKLRGRPGYEHLNEPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESHDYI 240
           KDPDKEEKLRGRPGYEHLNEPLHILIE DLP N+VDIRLRQAQEIIEELLKPVDESHDYI
Sbjct: 181 KDPDKEEKLRGRPGYEHLNEPLHILIEGDLPVNIVDIRLRQAQEIIEELLKPVDESHDYI 240

Query: 241 KRQQLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKTGR 282
           KRQQLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKTGR
Sbjct: 241 KRQQLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKTGR 281

[Close]

BLAST of Cmc08g0230681 vs. ExPASy TrEMBL
Match: A0A6J1HRK9 (KH domain-containing protein At3g08620-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111466075 PE=4 SV=1)

HSP 1 Score: 550.1 bits (1416), Expect = 5.5e-153
Identity = 273/281 (97.15%), Postives = 275/281 (97.86%), Query Frame = 0


Query: 1   MSGMYSTNFSPARTASPHIRTTPDVDSQYLSELLAEHQKFGPFMQVLPICGRLLNQEILR 60
           MSGMYSTNFSPARTASPHIRTTPDVDSQYLSELLAEHQKFGPFM VLPIC RLLNQEILR
Sbjct: 1   MSGMYSTNFSPARTASPHIRTTPDVDSQYLSELLAEHQKFGPFMHVLPICSRLLNQEILR 60

Query: 61  VSGMMSNQGFCDLDRLRHRSPSPMASSNLMSNVSSTGLSGWNGLPQERLSRAPGMTMDWQ 120
           VSGMMSNQGFCDLDRLRHRSPSPMASSNL+SNVSS GLSGWNGLPQERLSR PGMTMDWQ
Sbjct: 61  VSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSSAGLSGWNGLPQERLSRPPGMTMDWQ 120

Query: 121 SAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGSI 180
           SAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGSI
Sbjct: 121 SAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGSI 180

Query: 181 KDPDKEEKLRGRPGYEHLNEPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESHDYI 240
           KDPDKEEKLRGRPGYEHLNEPLHILIE DLP N+VDIRLRQAQEIIEELLKPVDESHDYI
Sbjct: 181 KDPDKEEKLRGRPGYEHLNEPLHILIEGDLPVNIVDIRLRQAQEIIEELLKPVDESHDYI 240

Query: 241 KRQQLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKTGR 282
           KRQQLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKTGR
Sbjct: 241 KRQQLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKTGR 281

[Close]

BLAST of Cmc08g0230681 vs. TAIR 10
Match: AT2G38610.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 462.6 bits (1189), Expect = 2.2e-130
Identity = 240/286 (83.92%), Postives = 257/286 (89.86%), Query Frame = 0


Query: 1   MSGMY--STNFSPARTASPHIRTTPDVD-SQYLSELLAEHQKFGPFMQVLPICGRLLNQE 60
           MSG+Y  S+ FSPAR ASP IR+TP++D SQYL+ELLAEHQK  PFMQVLPIC RLLNQE
Sbjct: 1   MSGLYNNSSYFSPARAASPQIRSTPEIDSSQYLTELLAEHQKLTPFMQVLPICSRLLNQE 60

Query: 61  ILRVSGMMSNQGFCDLDRLRHRSPSPMASSNLMSNVSSTGLSGWNGLPQERLSRAPGMTM 120
           + RVSGMMSNQGF D DRLRHRSPSPMASSNLMSNVS+TGL GWNGL QERLS  PGMTM
Sbjct: 61  MFRVSGMMSNQGFGDFDRLRHRSPSPMASSNLMSNVSNTGLGGWNGLSQERLSGTPGMTM 120

Query: 121 DWQSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGK 180
           DWQ AP SPSS TVKRILRLEIPVD YPNFNFVGRLLGPRGNSLKRVE TTGCRV+IRGK
Sbjct: 121 DWQGAPGSPSSYTVKRILRLEIPVDNYPNFNFVGRLLGPRGNSLKRVEATTGCRVFIRGK 180

Query: 181 GSIKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESH 240
           GSIKDP+KE+KLRGRPGYEHLNE LHILIEADLPA++V+IRLRQAQEIIEELLKPVDES 
Sbjct: 181 GSIKDPEKEDKLRGRPGYEHLNEQLHILIEADLPASIVEIRLRQAQEIIEELLKPVDESQ 240

Query: 241 DYIKRQQLRELAMLNS-SFREESPGP--GGSVSPFNSSGMKRAKTG 281
           D+IKRQQLRELA+LNS + REESPGP  GGSVSPFNSSG KR KTG
Sbjct: 241 DFIKRQQLRELALLNSNNLREESPGPSGGGSVSPFNSSG-KRPKTG 285

[Close]

BLAST of Cmc08g0230681 vs. TAIR 10
Match: AT2G38610.2 (RNA-binding KH domain-containing protein )

HSP 1 Score: 462.6 bits (1189), Expect = 2.2e-130
Identity = 240/286 (83.92%), Postives = 257/286 (89.86%), Query Frame = 0


Query: 1   MSGMY--STNFSPARTASPHIRTTPDVD-SQYLSELLAEHQKFGPFMQVLPICGRLLNQE 60
           MSG+Y  S+ FSPAR ASP IR+TP++D SQYL+ELLAEHQK  PFMQVLPIC RLLNQE
Sbjct: 1   MSGLYNNSSYFSPARAASPQIRSTPEIDSSQYLTELLAEHQKLTPFMQVLPICSRLLNQE 60

Query: 61  ILRVSGMMSNQGFCDLDRLRHRSPSPMASSNLMSNVSSTGLSGWNGLPQERLSRAPGMTM 120
           + RVSGMMSNQGF D DRLRHRSPSPMASSNLMSNVS+TGL GWNGL QERLS  PGMTM
Sbjct: 61  MFRVSGMMSNQGFGDFDRLRHRSPSPMASSNLMSNVSNTGLGGWNGLSQERLSGTPGMTM 120

Query: 121 DWQSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGK 180
           DWQ AP SPSS TVKRILRLEIPVD YPNFNFVGRLLGPRGNSLKRVE TTGCRV+IRGK
Sbjct: 121 DWQGAPGSPSSYTVKRILRLEIPVDNYPNFNFVGRLLGPRGNSLKRVEATTGCRVFIRGK 180

Query: 181 GSIKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESH 240
           GSIKDP+KE+KLRGRPGYEHLNE LHILIEADLPA++V+IRLRQAQEIIEELLKPVDES 
Sbjct: 181 GSIKDPEKEDKLRGRPGYEHLNEQLHILIEADLPASIVEIRLRQAQEIIEELLKPVDESQ 240

Query: 241 DYIKRQQLRELAMLNS-SFREESPGP--GGSVSPFNSSGMKRAKTG 281
           D+IKRQQLRELA+LNS + REESPGP  GGSVSPFNSSG KR KTG
Sbjct: 241 DFIKRQQLRELALLNSNNLREESPGPSGGGSVSPFNSSG-KRPKTG 285

[Close]

BLAST of Cmc08g0230681 vs. TAIR 10
Match: AT3G08620.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 458.0 bits (1177), Expect = 5.5e-129
Identity = 227/283 (80.21%), Postives = 249/283 (87.99%), Query Frame = 0


Query: 1   MSGMYS-TNFSPARTASPHIRT-TPDVDSQYLSELLAEHQKFGPFMQVLPICGRLLNQEI 60
           MSG+Y+  NFSP+R ASP IRT + DVDSQY+S+LLAEHQK GPFMQVLPIC RLLNQEI
Sbjct: 1   MSGLYNYNNFSPSRAASPQIRTPSSDVDSQYISQLLAEHQKLGPFMQVLPICSRLLNQEI 60

Query: 61  LRVSGMMSNQGFCDLDRLRHRSPSPMASSNLMSNVSSTGLSGWNGLPQERLSRAPGMTMD 120
            R++GMM NQGF D DRLRHRSPSPMAS NLMSNVS  GL GWNGLP ER+    GM M+
Sbjct: 61  FRITGMMPNQGFTDFDRLRHRSPSPMASPNLMSNVSGGGLGGWNGLPPERIGGPHGMAME 120

Query: 121 WQSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKG 180
           WQ APASPSS  VKRILRL++PVDTYPNFNFVGRLLGPRGNSLKRVE TTGCRVYIRGKG
Sbjct: 121 WQGAPASPSSYPVKRILRLDLPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKG 180

Query: 181 SIKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESHD 240
           SIKDP+KEEKL+G+PGYEHLNE LHILIEADLP ++VDI+LRQAQEIIEEL+KPVDES D
Sbjct: 181 SIKDPEKEEKLKGKPGYEHLNEQLHILIEADLPIDIVDIKLRQAQEIIEELVKPVDESQD 240

Query: 241 YIKRQQLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKTGR 282
           YIKRQQLRELA+LNS+ RE SPGP GSVSPFNS+ MKR KTGR
Sbjct: 241 YIKRQQLRELALLNSNLRENSPGPSGSVSPFNSNAMKRPKTGR 283

[Close]

BLAST of Cmc08g0230681 vs. TAIR 10
Match: AT4G26480.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 289.3 bits (739), Expect = 3.4e-78
Identity = 155/279 (55.56%), Postives = 196/279 (70.25%), Query Frame = 0


Query: 2   SGMYSTNFSPARTASPHIRTTPDVDSQYLSELLAEHQKFGPFMQVLPICGRLLNQEILRV 61
           S   S NFS    + P      +   +YLSELLAE  K  PF+ VLP   RL+NQEILRV
Sbjct: 37  SAPQSPNFSGGLRSQPSFLVEQE---KYLSELLAERHKLTPFLPVLPHVCRLMNQEILRV 96

Query: 62  SGMMSNQGFCDLDRLRHRSPSPMASSNLMSNVSSTGLSGW-NGLPQERLSRAPGMTMDWQ 121
           + ++ N     L + R   PSP+AS  +  N S   ++GW +  P ER S +     +W 
Sbjct: 97  TTLLENA----LSQSRFDHPSPLASGGIFQN-SRADMNGWASQFPSER-SVSSSPAPNWL 156

Query: 122 SAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGSI 181
           ++P S S L VKR +R++IPVD YPN+NFVGRLLGPRGNSLKRVE +T CRV IRG+GSI
Sbjct: 157 NSPGSSSGLIVKRTIRVDIPVDKYPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSI 216

Query: 182 KDPDKEEKLRGRPGYEHLNEPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESHDYI 241
           KDP KE+ +RG+PGYEHLNEPLHIL+EA+LP  +VD RL QA+EI+++LL PV+E+HD+ 
Sbjct: 217 KDPIKEDMMRGKPGYEHLNEPLHILVEAELPIEIVDARLMQAREILDDLLTPVEETHDFY 276

Query: 242 KRQQLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKT 280
           K+QQLRELA+LN S REE     GS+SP+NS GMKRAKT
Sbjct: 277 KKQQLRELALLNGSLREEGSPMSGSISPYNSLGMKRAKT 306

[Close]

BLAST of Cmc08g0230681 vs. TAIR 10
Match: AT5G56140.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 286.6 bits (732), Expect = 2.2e-77
Identity = 158/286 (55.24%), Postives = 201/286 (70.28%), Query Frame = 0


Query: 5   YSTNFS--PARTASPH----IRTTPDV---DSQYLSELLAEHQKFGPFMQVLPICGRLLN 64
           YS++ S  P+   SP+    +R+   V     +YLSELLAE  K  PF+ VLP   RLLN
Sbjct: 32  YSSSLSVPPSAPQSPNYSGGLRSQSSVFVEQEKYLSELLAERHKLTPFLPVLPHAFRLLN 91

Query: 65  QEILRVSGMMSNQGFCDLDRLRHRSPSPMASSNLMSNVSSTGLSGW-NGLPQER-LSRAP 124
           QEILRV+ ++ N        L H  PSP+AS  +  N +   ++GW +  P ER +  +P
Sbjct: 92  QEILRVTTLLENATVLSQSGLDH--PSPLASGGIFQN-ARADMNGWASQFPSERSVPSSP 151

Query: 125 GMTMDWQSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVY 184
           G   +W ++P S S L  KR +R++IPVD YPNFNFVGRLLGPRGNSLKRVE +T CRV 
Sbjct: 152 G--PNWLNSPGSSSGLIAKRTIRVDIPVDNYPNFNFVGRLLGPRGNSLKRVEASTDCRVL 211

Query: 185 IRGKGSIKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANVVDIRLRQAQEIIEELLKPV 244
           IRG+GSIKDP KEE +RG+PGYEHLNEPLHIL+EA+LP  +VD RL QA+EI+++LL P+
Sbjct: 212 IRGRGSIKDPIKEEMMRGKPGYEHLNEPLHILVEAELPIEIVDARLMQAREILDDLLTPM 271

Query: 245 DESHDYIKRQQLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKT 280
           +E+HD  K+QQLRELA+LN + REE     GSVSP+NS GMKRAKT
Sbjct: 272 EETHDMYKKQQLRELALLNGTLREEGSPMSGSVSPYNSLGMKRAKT 312

The following BLAST results are available for this feature:

BLAST of Cmc08g0230681 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008463293.1	1.3e-156	100.00	PREDICTED: KH domain-containing protein At2g38610 [Cucumis melo]	[more]
XP_004142668.1	2.9e-156	99.64	KH domain-containing protein At2g38610 isoform X2 [Cucumis sativus]	[more]
TYK06218.1	5.5e-155	100.00	KH domain-containing protein [Cucumis melo var. makuwa]	[more]
XP_011653733.1	7.2e-155	99.29	KH domain-containing protein At2g38610 isoform X1 [Cucumis sativus] >KAE8649596....	[more]
XP_038882688.1	2.1e-154	98.93	KH domain-containing protein At2g38610 isoform X2 [Benincasa hispida]	[more]

BLAST of Cmc08g0230681 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZVI3	3.2e-129	83.92	KH domain-containing protein At2g38610 OS=Arabidopsis thaliana OX=3702 GN=At2g38...	[more]
Q8GYR4	7.8e-128	80.21	KH domain-containing protein At3g08620 OS=Arabidopsis thaliana OX=3702 GN=At3g08...	[more]
Q75GR5	3.7e-114	72.70	KH domain-containing protein SPIN1 OS=Oryza sativa subsp. japonica OX=39947 GN=S...	[more]
Q0WLR1	4.8e-77	55.56	KH domain-containing protein At4g26480 OS=Arabidopsis thaliana OX=3702 GN=At4g26...	[more]
Q9FKT4	3.1e-76	55.24	KH domain-containing protein At5g56140 OS=Arabidopsis thaliana OX=3702 GN=At5g56...	[more]

BLAST of Cmc08g0230681 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CIV3	6.3e-157	100.00	KH domain-containing protein At2g38610 OS=Cucumis melo OX=3656 GN=LOC103501485 P...	[more]
A0A0A0KXW7	1.4e-156	99.64	KH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G337270 PE=4 SV=...	[more]
A0A5D3C4T5	2.7e-155	100.00	KH domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A6J1EEN1	1.5e-153	97.51	KH domain-containing protein At3g08620-like isoform X2 OS=Cucurbita moschata OX=...	[more]
A0A6J1HRK9	5.5e-153	97.15	KH domain-containing protein At3g08620-like isoform X2 OS=Cucurbita maxima OX=36...	[more]

BLAST of Cmc08g0230681 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G38610.1	2.2e-130	83.92	RNA-binding KH domain-containing protein	[more]
AT2G38610.2	2.2e-130	83.92	RNA-binding KH domain-containing protein	[more]
AT3G08620.1	5.5e-129	80.21	RNA-binding KH domain-containing protein	[more]
AT4G26480.1	3.4e-78	55.56	RNA-binding KH domain-containing protein	[more]
AT5G56140.1	2.2e-77	55.24	RNA-binding KH domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004087	K Homology domain	SMART	SM00322	kh_6	coord: 131..231 e-value: 1.1E-5 score: 34.9
IPR032377	STAR protein, homodimerisation region	PFAM	PF16544	STAR_dimer	coord: 23..70 e-value: 9.1E-13 score: 47.6
IPR036612	K Homology domain, type 1 superfamily	GENE3D	3.30.1370.10	K Homology domain, type 1	coord: 19..262 e-value: 9.0E-69 score: 233.6
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 138..254
IPR004088	K Homology domain, type 1	PFAM	PF00013	KH_1	coord: 148..184 e-value: 1.2E-4 score: 21.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 255..281
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 258..281
None	No IPR available	PANTHER	PTHR11208:SF114	STAR PROTEIN, HOMODIMERIZATION REGION-RELATED	coord: 2..281
None	No IPR available	CDD	cd02395	SF1_like-KH	coord: 136..256 e-value: 2.30682E-54 score: 170.117
IPR045071	KH domain-containing BBP-like	PANTHER	PTHR11208	RNA-BINDING PROTEIN RELATED	coord: 2..281

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc08g0230681.1	Cmc08g0230681.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048024	regulation of mRNA splicing, via spliceosome
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0016740	transferase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003723	RNA binding