Cmc08g0230141 (gene) Melon (Charmono) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GCTGGAATTCTAGAAGACGCGGAGAAAACCACACGCGTATCCTCCTCATTGGCTATTCTGTCATTTAAATTCACCGGCAATCGATGACGTGCCTCTCCTGACCTGAAGAACCCCAAGGATCGGGAAAAAAAAAAAATGGCCTTCCCTTTTCACCACCACCACCACCACCACCGCCATGACGACGATGAAGACGCCGAACCTCCTTATCCTCCACCGGGACACAGGCCGCCATACTCCGATCCACCGCCCCCACTGGTTCCCCACATCCACCACCACACTCACTACGGCGAGGCTCCTCCGCCGCCTCCACCGTCTTACGTTGGCTACGAGTCCAATTTCCCTCCGGAGCCGCCCGTTCCCGACTACGGATACTCCTCCGGACCCCCTCCTCCGGTCGTGCACCACCACTCTCACAATCCACACTCTCCCACTGTTATTCACCAACACTCTCATCACTCCGATTCTCCCTTCTCCAACAGACCAACGGTCAAGGTCTACGCCAAAGCAAACCCTAATTTCTCTCTTGCCATCCGCGACGGCAAGGTCGTCCTCGTTCCTTCCGATCCAGACGATCCCGCTCAAGTATGATCGATCCGTTCCTCGATCGCTTTCAGTTTTCGCCTTAATTTGTAATTAGAGTATTTGATTTTTTAATTTCTTCCTTATAATTTGATAATTTAATGGTGTTGGTGAATCGTGAACGTTTCAGCACTGGTTCAAAGATGAGAAATACAGTACAAGGATTAAGGATGAGGAAGGATGTCCCTGCTTTGCTCTGGTGAATAAGGCCACCGGTCAGGCGATGAAACATTCCGTTGGAGCTTCTCATCCGGTATGATTTTCCCCTGATTTTATTGCCATTTTTTAAAGTTCATCTGGAAATTGGAATTTCATTCGTGATAGAATGAATATAAGAATTTACAGATCTCAGAAAATGATTTTGATGAATTGAAAATGGCTTTTAGAATTTGACCAATAACCAATTTTATCCTTATTGGTTTGTGATGTTCGAGAATTAAAAATGTAACATACTACTTTCGATTTTTTTTATTTTATTTTTTTTTTTTGAAATTCTCATACGAATAAAACATAAATTTTAAATTTGTATGACAAATCAATTACACTATCAATTTATAAAAAGAAAAATTAAGAAAAAGAATATCATAAGTGTTTCAGACACGCTTTTCTAAAGATGCACAGCGATTCTAAAACCGGATCGGATTCTGCTGCTCCCCTCACGTTTATTTATTTATTAATTATTTTAGGGTTCAATTTTTTTTTTTTTTTTTCTGTTCTGAGAAAACAATTAGTATTCTATCAACGTTCTTGATTAAAATAACTTTAGTAGGTAGAATGGAAGTTCATTAATATATATATGATCTTTTAAAAGTGTAGGTGGGTCATGTATGAGTTTGTCCGTTGTAACTATTTCTTCTTTTTAAAAAGTTTTGATTAAAATGAAACATTTTTCATTTTTATTATAATTTCTTGTTACTATTTGTGGGCTTCTGTGGGGATTTTTAGGACTTCTTTTACTGTACCTAAATAGTGAAAAAGAAAAGGATATTTTCTTATATGAGCTTCTTTGGTCTGTATTAATTTATTTTAAAATTTGTAACTCTAATCCTTACCATGTATAATCTCATCATATCAATGCCAATTTTTATAATCTGATAAGTTACCATATTTTGTACAACTGAGAGTAAAGCAAGACATGCTAAAGTTTTATAGACCAAATTGTTGCTAAGTTGAAAGTATAGAGATAGAATTGTTTGGTTCAACACCAGAATACTTATTTTCAAAGACAGTTTTCCATAAAAGTTACTTATATTCTTTATTTGAGTTGGAATGCCAGTTTTATAATCAATTTTTTGATTTTGTGTTGGTTGGTTTATGATGTTCAAGTTGCCTGGATCTGGGCATTCTCTTTCATCAAGTTCTGGGATAGCATCTTGGTACATGGTTTCTTAAATTCTGGTTCTAGAAAGGTCACAATGGGGAGTAATAGAACCTGAAGATGCAATCAAGCCAAGTTTTGTTTTGGTTGATTATGACTGGTGTCCTTTTTGGTTGCATACTCTTTGTAATTTATCATTTTTGGTCAAACATGTCCAATCGAAACTGAACTGTGGAACTTTGTTAGATGTTGGTTTTGCATCTTGGAGGACATTGAATATTGGCATTGAGAAGATGATATATCAATTTCAAACTGACCGAGTTTAAAACTAAAACCGACTAAGGAGTGATATCAAATGCAGGTTCAGTTGACACGCTACGATCCAAATGTTGTGGACGAGTCTGTACTGTGGACACAGAGCAAGGAATTTGGGGAAGGATACAGAGCCATAAGAATGGTGAATAACGTTCACTTGAATGTTGATGCCTTTCATGGAGACAAATATTCTGGTGGAATTCATGACGGCACGCACATTGTTTTGTGGAAATGGAAGGAAGGAGAAAACCAACTGTGGAAGATCGTACCCTACTGTAAGTTCTTTCTCTTTTATACTATGGTTAGACATCATTCTCTTTTGTTCATCTTGCTGTTACTGACTCTTGATTTCTGGATCTCATGCCAAATCAATGGATTCTATTGTTCAGTTTTAGATTTTTCAATTCTAAATTTTTATTTCCCTCTTCCTAATCCTTTAATACCCTGTTAAACATGGATTTCATGTTGAAAAATGATAGACCAAAGGATTAGGGCAAGAGGTGAATTTTTTAATTTAGAGAGTTGCTGAAATAAATGAGCTATTTAGTCATAAGTTCAACGCGTAAGGTGTAAGGAGTTGCTTAATTTTATGGAAGCGATGGTTTTAGTCGTGGGATTCATAAATTCCTTGGGCAGAGTAAGGTTTTGTTGTTGACCTATTTTTCTTTTCAAACAATTTTCAAAACGATTGCATTGAGAAAAGAAAAGACGAAAGATCATACGAACATATAAAAAACCTCCACAAAAGGAGGAGTTCACTTTACAAGGAGGGGCTTCAACTATGCAACAAATGTTTATAGGGAATTATTAAATCCATCGAAATTGAAGTCTAAAGAGAAACATGAAAACAAACAAGGGACCAAACATCAAAAAGGTCTCTATCCACGCCCCTAAACACTCTTATTTCACACCTACCCAATACTCCATAGAAAACAGCATTTCCTCCCAAAATGTAGAATTGAGGAGAAACACTTTGATAATAACATTGGCGTCTTTGTGTCGAGTGATCATCAAACCAAACTTTAGAAAGAAATAATCTCAAACACAATACAAACTCACCACGCCAGAAAATATGGTCAAGTTTTTATAATTTTTAGATCTTTATCCCGATATGAATATGGTTCAATTTAACAAATGCTCTTAGTCAATTAAGAAGTGGGCGGTTCAAATCTTCCAAATTGAGATTAGATATTAAAATTTTGAAACTCAGTAAAAATTAACTTCTTCTTCTTCTTTAATTGGGTACAACAGGAGGATGTGATGAAATGAAGGGGATGCTATGGTATGCAATGGAGTGTTGTAATAATGTCATGTTGAGAATAAAGGTATTCTCGTGGATTTGAGAAAAACCATATTTGTAGTTCATGAAAAATTGAAAGTGTGTGGAGGCATCAATCAATATGTTTTGTGCTTTAGATTTAGCTTTAGCAATTAGCATCATTTGATTTGGATGGCTTTTACTTTCCACTCACAATATCCGCAGCTATTTTTATGGATCCCTTCATTTCAACCAAACTTTCTGTAAAAATATGTATCTTCTTCTGTTCCATTTGATGGTAATGATAGTAATTATATTATGTCCGTCTCCTATCTATCTACTTTGATCTTCTTTAGATTTTATTTTATTGC GCTGGAATTCTAGAAGACGCGGAGAAAACCACACGCGTATCCTCCTCATTGGCTATTCTGTCATTTAAATTCACCGGCAATCGATGACGTGCCTCTCCTGACCTGAAGAACCCCAAGGATCGGGAAAAAAAAAAAATGGCCTTCCCTTTTCACCACCACCACCACCACCACCGCCATGACGACGATGAAGACGCCGAACCTCCTTATCCTCCACCGGGACACAGGCCGCCATACTCCGATCCACCGCCCCCACTGGTTCCCCACATCCACCACCACACTCACTACGGCGAGGCTCCTCCGCCGCCTCCACCGTCTTACGTTGGCTACGAGTCCAATTTCCCTCCGGAGCCGCCCGTTCCCGACTACGGATACTCCTCCGGACCCCCTCCTCCGGTCGTGCACCACCACTCTCACAATCCACACTCTCCCACTGTTATTCACCAACACTCTCATCACTCCGATTCTCCCTTCTCCAACAGACCAACGGTCAAGGTCTACGCCAAAGCAAACCCTAATTTCTCTCTTGCCATCCGCGACGGCAAGGTCGTCCTCGTTCCTTCCGATCCAGACGATCCCGCTCAACACTGGTTCAAAGATGAGAAATACAGTACAAGGATTAAGGATGAGGAAGGATGTCCCTGCTTTGCTCTGGTGAATAAGGCCACCGGTCAGGCGATGAAACATTCCGTTGGAGCTTCTCATCCGGTTCAGTTGACACGCTACGATCCAAATGTTGTGGACGAGTCTGTACTGTGGACACAGAGCAAGGAATTTGGGGAAGGATACAGAGCCATAAGAATGGTGAATAACGTTCACTTGAATGTTGATGCCTTTCATGGAGACAAATATTCTGGTGGAATTCATGACGGCACGCACATTGTTTTGTGGAAATGGAAGGAAGGAGAAAACCAACTGTGGAAGATCGTACCCTACTGTAAGAGGATGTGATGAAATGAAGGGGATGCTATGGTATGCAATGGAGTGTTGTAATAATGTCATGTTGAGAATAAAGGTATTCTCGTGGATTTGAGAAAAACCATATTTGTAGTTCATGAAAAATTGAAAGTGTGTGGAGGCATCAATCAATATGTTTTGTGCTTTAGATTTAGCTTTAGCAATTAGCATCATTTGATTTGGATGGCTTTTACTTTCCACTCACAATATCCGCAGCTATTTTTATGGATCCCTTCATTTCAACCAAACTTTCTGTAAAAATATGTATCTTCTTCTGTTCCATTTGATGGTAATGATAGTAATTATATTATGTCCGTCTCCTATCTATCTACTTTGATCTTCTTTAGATTTTATTTTATTGC ATGGCCTTCCCTTTTCACCACCACCACCACCACCACCGCCATGACGACGATGAAGACGCCGAACCTCCTTATCCTCCACCGGGACACAGGCCGCCATACTCCGATCCACCGCCCCCACTGGTTCCCCACATCCACCACCACACTCACTACGGCGAGGCTCCTCCGCCGCCTCCACCGTCTTACGTTGGCTACGAGTCCAATTTCCCTCCGGAGCCGCCCGTTCCCGACTACGGATACTCCTCCGGACCCCCTCCTCCGGTCGTGCACCACCACTCTCACAATCCACACTCTCCCACTGTTATTCACCAACACTCTCATCACTCCGATTCTCCCTTCTCCAACAGACCAACGGTCAAGGTCTACGCCAAAGCAAACCCTAATTTCTCTCTTGCCATCCGCGACGGCAAGGTCGTCCTCGTTCCTTCCGATCCAGACGATCCCGCTCAACACTGGTTCAAAGATGAGAAATACAGTACAAGGATTAAGGATGAGGAAGGATGTCCCTGCTTTGCTCTGGTGAATAAGGCCACCGGTCAGGCGATGAAACATTCCGTTGGAGCTTCTCATCCGGTTCAGTTGACACGCTACGATCCAAATGTTGTGGACGAGTCTGTACTGTGGACACAGAGCAAGGAATTTGGGGAAGGATACAGAGCCATAAGAATGGTGAATAACGTTCACTTGAATGTTGATGCCTTTCATGGAGACAAATATTCTGGTGGAATTCATGACGGCACGCACATTGTTTTGTGGAAATGGAAGGAAGGAGAAAACCAACTGTGGAAGATCGTACCCTACTGTAAGAGGATGTGA MAFPFHHHHHHHRHDDDEDAEPPYPPPGHRPPYSDPPPPLVPHIHHHTHYGEAPPPPPPSYVGYESNFPPEPPVPDYGYSSGPPPPVVHHHSHNPHSPTVIHQHSHHSDSPFSNRPTVKVYAKANPNFSLAIRDGKVVLVPSDPDDPAQHWFKDEKYSTRIKDEEGCPCFALVNKATGQAMKHSVGASHPVQLTRYDPNVVDESVLWTQSKEFGEGYRAIRMVNNVHLNVDAFHGDKYSGGIHDGTHIVLWKWKEGENQLWKIVPYCKRM Homology
BLAST of Cmc08g0230141 vs. NCBI nr
Match: XP_008441967.1 (PREDICTED: extensin [Cucumis melo]) HSP 1 Score: 565.1 bits (1455), Expect = 3.3e-157 Identity = 266/266 (100.00%), Postives = 266/266 (100.00%), Query Frame = 0
BLAST of Cmc08g0230141 vs. NCBI nr
Match: XP_004147526.1 (ricin B-like lectin R40G3 [Cucumis sativus] >KGN53954.1 hypothetical protein Csa_021593 [Cucumis sativus]) HSP 1 Score: 528.9 bits (1361), Expect = 2.6e-146 Identity = 250/266 (93.98%), Postives = 257/266 (96.62%), Query Frame = 0
BLAST of Cmc08g0230141 vs. NCBI nr
Match: XP_038881782.1 (ricin B-like lectin R40G3 [Benincasa hispida]) HSP 1 Score: 493.8 bits (1270), Expect = 9.4e-136 Identity = 237/266 (89.10%), Postives = 250/266 (93.98%), Query Frame = 0
BLAST of Cmc08g0230141 vs. NCBI nr
Match: KAG6603498.1 (Ricin B-like lectin EULS3, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 440.3 bits (1131), Expect = 1.2e-119 Identity = 216/282 (76.60%), Postives = 239/282 (84.75%), Query Frame = 0
BLAST of Cmc08g0230141 vs. NCBI nr
Match: KAG7033678.1 (Ricin B-like lectin EULS3 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 439.9 bits (1130), Expect = 1.6e-119 Identity = 215/282 (76.24%), Postives = 239/282 (84.75%), Query Frame = 0
BLAST of Cmc08g0230141 vs. ExPASy Swiss-Prot
Match: Q945P1 (Ricin B-like lectin EULS3 OS=Arabidopsis thaliana OX=3702 GN=EULS3 PE=1 SV=1) HSP 1 Score: 249.2 bits (635), Expect = 5.3e-65 Identity = 149/316 (47.15%), Postives = 186/316 (58.86%), Query Frame = 0
BLAST of Cmc08g0230141 vs. ExPASy Swiss-Prot
Match: Q6Z4N4 (Ricin B-like lectin R40G3 OS=Oryza sativa subsp. japonica OX=39947 GN=R40G3 PE=2 SV=1) HSP 1 Score: 226.5 bits (576), Expect = 3.7e-58 Identity = 106/189 (56.08%), Postives = 135/189 (71.43%), Query Frame = 0
BLAST of Cmc08g0230141 vs. ExPASy Swiss-Prot
Match: Q6Z4N6 (Ricin B-like lectin R40G2 OS=Oryza sativa subsp. japonica OX=39947 GN=R40G2 PE=2 SV=1) HSP 1 Score: 208.8 bits (530), Expect = 7.9e-53 Identity = 91/165 (55.15%), Postives = 120/165 (72.73%), Query Frame = 0
BLAST of Cmc08g0230141 vs. ExPASy Swiss-Prot
Match: Q10M12 (Ricin B-like lectin R40C1 OS=Oryza sativa subsp. japonica OX=39947 GN=R40C1 PE=1 SV=1) HSP 1 Score: 207.2 bits (526), Expect = 2.3e-52 Identity = 94/178 (52.81%), Postives = 128/178 (71.91%), Query Frame = 0
BLAST of Cmc08g0230141 vs. ExPASy TrEMBL
Match: A0A1S3B4K8 (extensin OS=Cucumis melo OX=3656 GN=LOC103485969 PE=4 SV=1) HSP 1 Score: 565.1 bits (1455), Expect = 1.6e-157 Identity = 266/266 (100.00%), Postives = 266/266 (100.00%), Query Frame = 0
BLAST of Cmc08g0230141 vs. ExPASy TrEMBL
Match: A0A0A0KYQ4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G193240 PE=4 SV=1) HSP 1 Score: 528.9 bits (1361), Expect = 1.3e-146 Identity = 250/266 (93.98%), Postives = 257/266 (96.62%), Query Frame = 0
BLAST of Cmc08g0230141 vs. ExPASy TrEMBL
Match: A0A6J1GEM1 (ricin B-like lectin R40G3 OS=Cucurbita moschata OX=3662 GN=LOC111453449 PE=4 SV=1) HSP 1 Score: 438.3 bits (1126), Expect = 2.3e-119 Identity = 216/282 (76.60%), Postives = 239/282 (84.75%), Query Frame = 0
BLAST of Cmc08g0230141 vs. ExPASy TrEMBL
Match: A0A6J1ITL7 (ricin B-like lectin R40G3 OS=Cucurbita maxima OX=3661 GN=LOC111478294 PE=4 SV=1) HSP 1 Score: 438.0 bits (1125), Expect = 2.9e-119 Identity = 215/282 (76.24%), Postives = 238/282 (84.40%), Query Frame = 0
BLAST of Cmc08g0230141 vs. ExPASy TrEMBL
Match: A0A6J1DST7 (ricin B-like lectin R40G3 OS=Momordica charantia OX=3673 GN=LOC111023166 PE=4 SV=1) HSP 1 Score: 426.8 bits (1096), Expect = 6.8e-116 Identity = 206/266 (77.44%), Postives = 227/266 (85.34%), Query Frame = 0
BLAST of Cmc08g0230141 vs. TAIR 10
Match: AT2G39050.1 (hydroxyproline-rich glycoprotein family protein ) HSP 1 Score: 249.2 bits (635), Expect = 3.7e-66 Identity = 149/316 (47.15%), Postives = 186/316 (58.86%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|