Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTAAGGTAGATTCCAATTTTGTGCTGAAAGTCCAGGACATGTTTTCAACAAAATCTTTGTTCAAACAGTACGTACAAGCTATTGCTATTAGAGATAATTTCCAGTACGTTATCGTGAAATCGAACAAGGAAGTTATGATTTTGCAATGCGCCATTGAAAATTGCAAATGGTCCTTACGTGCTTCTTGTTGTATTCATGGGGATAGGTCATTATGGGTTCTTACTAGGTTTGATTCAGAACATACATGTTTAGTAGATGTTCCATTATCCGATTATAGACAGGCCACCTTTACTGTTACCAAGGACCTAATTAAGAACAAAATTTCTTTAGCTGGTTTTGAATTGTCAACTTCCAAAGATATAGTTCATTTCATTCGTGCTGAACATGGTTTAAGTATATCCTACCAAAAAGCATGGCGTGCTCATGAGACTGCGTTGGATGATATTCGTGGATCTCCAGATGACTCCTACAAGATGTTACCCAGATTTGCATATATATTGGAACTCAACAACCCAGGTATATTCGCAATATACATAGGTATATTACTATACAATTTTCCTTCATTATTTCTTTAACATGTTTTTGTCATATGTTCTTATTTTTTTTTATGTTTATAGGTTATGTTGTTGAATACAAAGTTGATGTCGATGGTAGATTTCTTTACTTCTTCATGGCATTATCTGCTTCCATTTCTGGTTGGCAACATTGTCGTCCAATCATTTCTATTGATGGAACAAGTCTGAAGAATAAGTACGGTGGTACTTTGTTATCTGCTTCAACTCTTGATGGCCAATGA
mRNA sequence
ATGTCTAAGGTAGATTCCAATTTTGTGCTGAAAGTCCAGGACATGTTTTCAACAAAATCTTTGTTCAAACAGTACGTACAAGCTATTGCTATTAGAGATAATTTCCAGTACGTTATCGTGAAATCGAACAAGGAAGTTATGATTTTGCAATGCGCCATTGAAAATTGCAAATGGTCCTTACGTGCTTCTTGTTGTATTCATGGGGATAGGTCATTATGGGTTCTTACTAGGTTTGATTCAGAACATACATGTTTAGTAGATGTTCCATTATCCGATTATAGACAGGCCACCTTTACTGTTACCAAGGACCTAATTAAGAACAAAATTTCTTTAGCTGGTTTTGAATTGTCAACTTCCAAAGATATAGTTCATTTCATTCGTGCTGAACATGGTTTAAGTATATCCTACCAAAAAGCATGGCGTGCTCATGAGACTGCGTTGGATGATATTCGTGGATCTCCAGATGACTCCTACAAGATGTTACCCAGATTTGCATATATATTGGAACTCAACAACCCAGGTATATTCGCAATATACATAGGTTATGTTGTTGAATACAAAGTTGATGTCGATGGTAGATTTCTTTACTTCTTCATGGCATTATCTGCTTCCATTTCTGGTTGGCAACATTGTCGTCCAATCATTTCTATTGATGGAACAAGTCTGAAGAATAAGTACGGTGGTACTTTGTTATCTGCTTCAACTCTTGATGGCCAATGA
Coding sequence (CDS)
ATGTCTAAGGTAGATTCCAATTTTGTGCTGAAAGTCCAGGACATGTTTTCAACAAAATCTTTGTTCAAACAGTACGTACAAGCTATTGCTATTAGAGATAATTTCCAGTACGTTATCGTGAAATCGAACAAGGAAGTTATGATTTTGCAATGCGCCATTGAAAATTGCAAATGGTCCTTACGTGCTTCTTGTTGTATTCATGGGGATAGGTCATTATGGGTTCTTACTAGGTTTGATTCAGAACATACATGTTTAGTAGATGTTCCATTATCCGATTATAGACAGGCCACCTTTACTGTTACCAAGGACCTAATTAAGAACAAAATTTCTTTAGCTGGTTTTGAATTGTCAACTTCCAAAGATATAGTTCATTTCATTCGTGCTGAACATGGTTTAAGTATATCCTACCAAAAAGCATGGCGTGCTCATGAGACTGCGTTGGATGATATTCGTGGATCTCCAGATGACTCCTACAAGATGTTACCCAGATTTGCATATATATTGGAACTCAACAACCCAGGTATATTCGCAATATACATAGGTTATGTTGTTGAATACAAAGTTGATGTCGATGGTAGATTTCTTTACTTCTTCATGGCATTATCTGCTTCCATTTCTGGTTGGCAACATTGTCGTCCAATCATTTCTATTGATGGAACAAGTCTGAAGAATAAGTACGGTGGTACTTTGTTATCTGCTTCAACTCTTGATGGCCAATGA
Protein sequence
MSKVDSNFVLKVQDMFSTKSLFKQYVQAIAIRDNFQYVIVKSNKEVMILQCAIENCKWSLRASCCIHGDRSLWVLTRFDSEHTCLVDVPLSDYRQATFTVTKDLIKNKISLAGFELSTSKDIVHFIRAEHGLSISYQKAWRAHETALDDIRGSPDDSYKMLPRFAYILELNNPGIFAIYIGYVVEYKVDVDGRFLYFFMALSASISGWQHCRPIISIDGTSLKNKYGGTLLSASTLDGQ
Homology
BLAST of Cmc08g0230081 vs. NCBI nr
Match:
KAA0060121.1 (protein FAR-RED ELONGATED HYPOCOTYL 3-like [Cucumis melo var. makuwa])
HSP 1 Score: 485.0 bits (1247), Expect = 3.8e-133
Identity = 239/239 (100.00%), Postives = 239/239 (100.00%), Query Frame = 0
Query: 1 MSKVDSNFVLKVQDMFSTKSLFKQYVQAIAIRDNFQYVIVKSNKEVMILQCAIENCKWSL 60
MSKVDSNFVLKVQDMFSTKSLFKQYVQAIAIRDNFQYVIVKSNKEVMILQCAIENCKWSL
Sbjct: 1 MSKVDSNFVLKVQDMFSTKSLFKQYVQAIAIRDNFQYVIVKSNKEVMILQCAIENCKWSL 60
Query: 61 RASCCIHGDRSLWVLTRFDSEHTCLVDVPLSDYRQATFTVTKDLIKNKISLAGFELSTSK 120
RASCCIHGDRSLWVLTRFDSEHTCLVDVPLSDYRQATFTVTKDLIKNKISLAGFELSTSK
Sbjct: 61 RASCCIHGDRSLWVLTRFDSEHTCLVDVPLSDYRQATFTVTKDLIKNKISLAGFELSTSK 120
Query: 121 DIVHFIRAEHGLSISYQKAWRAHETALDDIRGSPDDSYKMLPRFAYILELNNPGIFAIYI 180
DIVHFIRAEHGLSISYQKAWRAHETALDDIRGSPDDSYKMLPRFAYILELNNPGIFAIYI
Sbjct: 121 DIVHFIRAEHGLSISYQKAWRAHETALDDIRGSPDDSYKMLPRFAYILELNNPGIFAIYI 180
Query: 181 GYVVEYKVDVDGRFLYFFMALSASISGWQHCRPIISIDGTSLKNKYGGTLLSASTLDGQ 240
GYVVEYKVDVDGRFLYFFMALSASISGWQHCRPIISIDGTSLKNKYGGTLLSASTLDGQ
Sbjct: 181 GYVVEYKVDVDGRFLYFFMALSASISGWQHCRPIISIDGTSLKNKYGGTLLSASTLDGQ 239
BLAST of Cmc08g0230081 vs. NCBI nr
Match:
KAA0039149.1 (protein FAR-RED ELONGATED HYPOCOTYL 3-like [Cucumis melo var. makuwa])
HSP 1 Score: 386.0 bits (990), Expect = 2.4e-103
Identity = 196/237 (82.70%), Postives = 208/237 (87.76%), Query Frame = 0
Query: 1 MSKVDSNFVLKVQDMFSTKSLFKQYVQAIAIRDNFQYVIVKSNKEVMILQCAIENCKWSL 60
MSKVDSNF LKVQDMFS+K LFKQ +QAI +RDNFQYVIVKSNKEVMILQCAIENCKWSL
Sbjct: 1 MSKVDSNFALKVQDMFSSKYLFKQCIQAITLRDNFQYVIVKSNKEVMILQCAIENCKWSL 60
Query: 61 RASCCIHGDRSLWVLTRFDSEHTCLVDVPLSDYRQATFTVTKDLIKNKISLAGFELSTSK 120
RASCCIHGDRSLWVLTRFD EHT VDVPL+D+RQATF V KDLIKNKISLAG +LST K
Sbjct: 61 RASCCIHGDRSLWVLTRFDFEHTYSVDVPLTDHRQATFNVIKDLIKNKISLAGSKLSTPK 120
Query: 121 DIVHFIRAEHGLSISYQKAWRAHETALDDIRGSPDDSYKMLPRFAYILELNNPGIFAIYI 180
+IVHFI EHGLSISYQKAWRA + ALDDIRGS +DSYKMLPRFAYILELNN +
Sbjct: 121 NIVHFICDEHGLSISYQKAWRACKVALDDIRGSLEDSYKMLPRFAYILELNN-------L 180
Query: 181 GYVVEYKVDVDGRFLYFFMALSASISGWQHCRPIISIDGTSLKNKYGGTLLSASTLD 238
G VVEYKVD D RFLYFFMALSASISGWQHC +I IDGTSLKNKYGGTLLS+STLD
Sbjct: 181 GSVVEYKVDADDRFLYFFMALSASISGWQHCCLVIFIDGTSLKNKYGGTLLSSSTLD 230
BLAST of Cmc08g0230081 vs. NCBI nr
Match:
XP_008463110.1 (PREDICTED: uncharacterized protein LOC103501336 [Cucumis melo])
HSP 1 Score: 386.0 bits (990), Expect = 2.4e-103
Identity = 196/237 (82.70%), Postives = 208/237 (87.76%), Query Frame = 0
Query: 1 MSKVDSNFVLKVQDMFSTKSLFKQYVQAIAIRDNFQYVIVKSNKEVMILQCAIENCKWSL 60
MSKVDSNF LKVQDMFS+K LFKQ +QAI +RDNFQYVIVKSNKEVMILQCAIENCKWSL
Sbjct: 1 MSKVDSNFALKVQDMFSSKYLFKQCIQAITLRDNFQYVIVKSNKEVMILQCAIENCKWSL 60
Query: 61 RASCCIHGDRSLWVLTRFDSEHTCLVDVPLSDYRQATFTVTKDLIKNKISLAGFELSTSK 120
RASCCIHGDRSLWVLTRFD EHT VDVPL+D+RQATF V KDLIKNKISLAG +LST K
Sbjct: 61 RASCCIHGDRSLWVLTRFDFEHTYSVDVPLTDHRQATFNVIKDLIKNKISLAGSKLSTPK 120
Query: 121 DIVHFIRAEHGLSISYQKAWRAHETALDDIRGSPDDSYKMLPRFAYILELNNPGIFAIYI 180
+IVHFI EHGLSISYQKAWRA + ALDDIRGS +DSYKMLPRFAYILELNN +
Sbjct: 121 NIVHFICDEHGLSISYQKAWRACKVALDDIRGSLEDSYKMLPRFAYILELNN-------L 180
Query: 181 GYVVEYKVDVDGRFLYFFMALSASISGWQHCRPIISIDGTSLKNKYGGTLLSASTLD 238
G VVEYKVD D RFLYFFMALSASISGWQHC +I IDGTSLKNKYGGTLLS+STLD
Sbjct: 181 GSVVEYKVDADDRFLYFFMALSASISGWQHCCLVIFIDGTSLKNKYGGTLLSSSTLD 230
BLAST of Cmc08g0230081 vs. NCBI nr
Match:
KAA0033232.1 (protein FAR-RED ELONGATED HYPOCOTYL 3-like [Cucumis melo var. makuwa] >TYJ98812.1 protein FAR-RED ELONGATED HYPOCOTYL 3-like [Cucumis melo var. makuwa])
HSP 1 Score: 353.2 bits (905), Expect = 1.7e-93
Identity = 178/225 (79.11%), Postives = 192/225 (85.33%), Query Frame = 0
Query: 1 MSKVDSNFVLKVQDMFSTKSLFKQYVQAIAIRDNFQYVIVKSNKEVMILQCAIENCKWSL 60
MSKVDSNF LKVQDMFSTKS FKQ VQAIA+RDNFQYV VKSNKEVMILQC IENCK SL
Sbjct: 1 MSKVDSNFALKVQDMFSTKSWFKQSVQAIALRDNFQYVAVKSNKEVMILQCTIENCKCSL 60
Query: 61 RASCCIHGDRSLWVLTRFDSEHTCLVDVPLSDYRQATFTVTKDLIKNKISLAGFELSTSK 120
AS CIHGDR+LWVLTR+DSEHTC VDVPL+D+R ATFTV KDLIKNKI LAG ELST K
Sbjct: 61 CASFCIHGDRTLWVLTRYDSEHTCSVDVPLTDHRHATFTVIKDLIKNKIFLAGSELSTPK 120
Query: 121 DIVHFIRAEHGLSISYQKAWRAHETALDDIRGSPDDSYKMLPRFAYILELNNPGIFAIYI 180
DIV +IRAEHGLSI YQ AWRA E ALD+I GSP+DSYKM+P+F YIL+LN P
Sbjct: 121 DIVRYIRAEHGLSIFYQIAWRAREAALDEIHGSPEDSYKMIPQFVYILKLNKP------- 180
Query: 181 GYVVEYKVDVDGRFLYFFMALSASISGWQHCRPIISIDGTSLKNK 226
VVEYKVD DGRFLYFF+ALSA+ISGWQHC P+ISIDGTSLKNK
Sbjct: 181 CSVVEYKVDADGRFLYFFVALSATISGWQHCCPLISIDGTSLKNK 218
BLAST of Cmc08g0230081 vs. NCBI nr
Match:
KAA0051302.1 (protein FAR-RED ELONGATED HYPOCOTYL 3-like [Cucumis melo var. makuwa])
HSP 1 Score: 344.4 bits (882), Expect = 8.1e-91
Identity = 176/224 (78.57%), Postives = 193/224 (86.16%), Query Frame = 0
Query: 15 MFSTKSLFKQYVQAIAIRDNFQYVIVKSNKEVMILQCAIENCKWSLRASCCIHGDRSLWV 74
MFSTKSLFK+ V+AIA+RDNFQY+ VKSNKEVMILQCAI+N KWSLRASC IH DRS+WV
Sbjct: 1 MFSTKSLFKKCVKAIALRDNFQYLTVKSNKEVMILQCAIKNYKWSLRASCSIHWDRSIWV 60
Query: 75 LTRFDSEHTCLVDVPLSDYRQATFTVTKDLIKNKISLAGFELSTSKDIVHFIRAEHGLSI 134
+TRFD EHTC VDVPL+D+RQATFTV KDLIKNKISLAG ELSTSKDIVHFIRA+HGLS
Sbjct: 61 VTRFDLEHTCSVDVPLTDHRQATFTVIKDLIKNKISLAGSELSTSKDIVHFIRAKHGLSK 120
Query: 135 SYQKAWRAHETALDDIRGSPDDSYKMLPRFAYILELNNPGIFAIYIGYVVEYKVDVDGRF 194
SYQKAWRA E LDDIRGS +DSYKML RF YILELNN +G V+EYKVD DGRF
Sbjct: 121 SYQKAWRAPEATLDDIRGSHEDSYKMLSRFVYILELNN-------LGSVIEYKVDADGRF 180
Query: 195 LYFFMALSASISGWQHCRPIISIDGTSLKNKYG-GTLLSASTLD 238
LYFFMAL ASI+GW+H R +ISIDGTSLKN+YG GTLL AST D
Sbjct: 181 LYFFMALFASITGWKHYRLVISIDGTSLKNQYGDGTLLFASTPD 217
BLAST of Cmc08g0230081 vs. ExPASy TrEMBL
Match:
A0A5A7V2Y2 (Protein FAR-RED ELONGATED HYPOCOTYL 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold39G00410 PE=4 SV=1)
HSP 1 Score: 485.0 bits (1247), Expect = 1.9e-133
Identity = 239/239 (100.00%), Postives = 239/239 (100.00%), Query Frame = 0
Query: 1 MSKVDSNFVLKVQDMFSTKSLFKQYVQAIAIRDNFQYVIVKSNKEVMILQCAIENCKWSL 60
MSKVDSNFVLKVQDMFSTKSLFKQYVQAIAIRDNFQYVIVKSNKEVMILQCAIENCKWSL
Sbjct: 1 MSKVDSNFVLKVQDMFSTKSLFKQYVQAIAIRDNFQYVIVKSNKEVMILQCAIENCKWSL 60
Query: 61 RASCCIHGDRSLWVLTRFDSEHTCLVDVPLSDYRQATFTVTKDLIKNKISLAGFELSTSK 120
RASCCIHGDRSLWVLTRFDSEHTCLVDVPLSDYRQATFTVTKDLIKNKISLAGFELSTSK
Sbjct: 61 RASCCIHGDRSLWVLTRFDSEHTCLVDVPLSDYRQATFTVTKDLIKNKISLAGFELSTSK 120
Query: 121 DIVHFIRAEHGLSISYQKAWRAHETALDDIRGSPDDSYKMLPRFAYILELNNPGIFAIYI 180
DIVHFIRAEHGLSISYQKAWRAHETALDDIRGSPDDSYKMLPRFAYILELNNPGIFAIYI
Sbjct: 121 DIVHFIRAEHGLSISYQKAWRAHETALDDIRGSPDDSYKMLPRFAYILELNNPGIFAIYI 180
Query: 181 GYVVEYKVDVDGRFLYFFMALSASISGWQHCRPIISIDGTSLKNKYGGTLLSASTLDGQ 240
GYVVEYKVDVDGRFLYFFMALSASISGWQHCRPIISIDGTSLKNKYGGTLLSASTLDGQ
Sbjct: 181 GYVVEYKVDVDGRFLYFFMALSASISGWQHCRPIISIDGTSLKNKYGGTLLSASTLDGQ 239
BLAST of Cmc08g0230081 vs. ExPASy TrEMBL
Match:
A0A5A7TCZ3 (Protein FAR-RED ELONGATED HYPOCOTYL 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold121G00480 PE=4 SV=1)
HSP 1 Score: 386.0 bits (990), Expect = 1.2e-103
Identity = 196/237 (82.70%), Postives = 208/237 (87.76%), Query Frame = 0
Query: 1 MSKVDSNFVLKVQDMFSTKSLFKQYVQAIAIRDNFQYVIVKSNKEVMILQCAIENCKWSL 60
MSKVDSNF LKVQDMFS+K LFKQ +QAI +RDNFQYVIVKSNKEVMILQCAIENCKWSL
Sbjct: 1 MSKVDSNFALKVQDMFSSKYLFKQCIQAITLRDNFQYVIVKSNKEVMILQCAIENCKWSL 60
Query: 61 RASCCIHGDRSLWVLTRFDSEHTCLVDVPLSDYRQATFTVTKDLIKNKISLAGFELSTSK 120
RASCCIHGDRSLWVLTRFD EHT VDVPL+D+RQATF V KDLIKNKISLAG +LST K
Sbjct: 61 RASCCIHGDRSLWVLTRFDFEHTYSVDVPLTDHRQATFNVIKDLIKNKISLAGSKLSTPK 120
Query: 121 DIVHFIRAEHGLSISYQKAWRAHETALDDIRGSPDDSYKMLPRFAYILELNNPGIFAIYI 180
+IVHFI EHGLSISYQKAWRA + ALDDIRGS +DSYKMLPRFAYILELNN +
Sbjct: 121 NIVHFICDEHGLSISYQKAWRACKVALDDIRGSLEDSYKMLPRFAYILELNN-------L 180
Query: 181 GYVVEYKVDVDGRFLYFFMALSASISGWQHCRPIISIDGTSLKNKYGGTLLSASTLD 238
G VVEYKVD D RFLYFFMALSASISGWQHC +I IDGTSLKNKYGGTLLS+STLD
Sbjct: 181 GSVVEYKVDADDRFLYFFMALSASISGWQHCCLVIFIDGTSLKNKYGGTLLSSSTLD 230
BLAST of Cmc08g0230081 vs. ExPASy TrEMBL
Match:
A0A1S3CIV7 (uncharacterized protein LOC103501336 OS=Cucumis melo OX=3656 GN=LOC103501336 PE=4 SV=1)
HSP 1 Score: 386.0 bits (990), Expect = 1.2e-103
Identity = 196/237 (82.70%), Postives = 208/237 (87.76%), Query Frame = 0
Query: 1 MSKVDSNFVLKVQDMFSTKSLFKQYVQAIAIRDNFQYVIVKSNKEVMILQCAIENCKWSL 60
MSKVDSNF LKVQDMFS+K LFKQ +QAI +RDNFQYVIVKSNKEVMILQCAIENCKWSL
Sbjct: 1 MSKVDSNFALKVQDMFSSKYLFKQCIQAITLRDNFQYVIVKSNKEVMILQCAIENCKWSL 60
Query: 61 RASCCIHGDRSLWVLTRFDSEHTCLVDVPLSDYRQATFTVTKDLIKNKISLAGFELSTSK 120
RASCCIHGDRSLWVLTRFD EHT VDVPL+D+RQATF V KDLIKNKISLAG +LST K
Sbjct: 61 RASCCIHGDRSLWVLTRFDFEHTYSVDVPLTDHRQATFNVIKDLIKNKISLAGSKLSTPK 120
Query: 121 DIVHFIRAEHGLSISYQKAWRAHETALDDIRGSPDDSYKMLPRFAYILELNNPGIFAIYI 180
+IVHFI EHGLSISYQKAWRA + ALDDIRGS +DSYKMLPRFAYILELNN +
Sbjct: 121 NIVHFICDEHGLSISYQKAWRACKVALDDIRGSLEDSYKMLPRFAYILELNN-------L 180
Query: 181 GYVVEYKVDVDGRFLYFFMALSASISGWQHCRPIISIDGTSLKNKYGGTLLSASTLD 238
G VVEYKVD D RFLYFFMALSASISGWQHC +I IDGTSLKNKYGGTLLS+STLD
Sbjct: 181 GSVVEYKVDADDRFLYFFMALSASISGWQHCCLVIFIDGTSLKNKYGGTLLSSSTLD 230
BLAST of Cmc08g0230081 vs. ExPASy TrEMBL
Match:
A0A5D3BGB6 (Protein FAR-RED ELONGATED HYPOCOTYL 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold703G00120 PE=4 SV=1)
HSP 1 Score: 353.2 bits (905), Expect = 8.5e-94
Identity = 178/225 (79.11%), Postives = 192/225 (85.33%), Query Frame = 0
Query: 1 MSKVDSNFVLKVQDMFSTKSLFKQYVQAIAIRDNFQYVIVKSNKEVMILQCAIENCKWSL 60
MSKVDSNF LKVQDMFSTKS FKQ VQAIA+RDNFQYV VKSNKEVMILQC IENCK SL
Sbjct: 1 MSKVDSNFALKVQDMFSTKSWFKQSVQAIALRDNFQYVAVKSNKEVMILQCTIENCKCSL 60
Query: 61 RASCCIHGDRSLWVLTRFDSEHTCLVDVPLSDYRQATFTVTKDLIKNKISLAGFELSTSK 120
AS CIHGDR+LWVLTR+DSEHTC VDVPL+D+R ATFTV KDLIKNKI LAG ELST K
Sbjct: 61 CASFCIHGDRTLWVLTRYDSEHTCSVDVPLTDHRHATFTVIKDLIKNKIFLAGSELSTPK 120
Query: 121 DIVHFIRAEHGLSISYQKAWRAHETALDDIRGSPDDSYKMLPRFAYILELNNPGIFAIYI 180
DIV +IRAEHGLSI YQ AWRA E ALD+I GSP+DSYKM+P+F YIL+LN P
Sbjct: 121 DIVRYIRAEHGLSIFYQIAWRAREAALDEIHGSPEDSYKMIPQFVYILKLNKP------- 180
Query: 181 GYVVEYKVDVDGRFLYFFMALSASISGWQHCRPIISIDGTSLKNK 226
VVEYKVD DGRFLYFF+ALSA+ISGWQHC P+ISIDGTSLKNK
Sbjct: 181 CSVVEYKVDADGRFLYFFVALSATISGWQHCCPLISIDGTSLKNK 218
BLAST of Cmc08g0230081 vs. ExPASy TrEMBL
Match:
A0A5A7U620 (Protein FAR-RED ELONGATED HYPOCOTYL 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55G00090 PE=4 SV=1)
HSP 1 Score: 344.4 bits (882), Expect = 3.9e-91
Identity = 176/224 (78.57%), Postives = 193/224 (86.16%), Query Frame = 0
Query: 15 MFSTKSLFKQYVQAIAIRDNFQYVIVKSNKEVMILQCAIENCKWSLRASCCIHGDRSLWV 74
MFSTKSLFK+ V+AIA+RDNFQY+ VKSNKEVMILQCAI+N KWSLRASC IH DRS+WV
Sbjct: 1 MFSTKSLFKKCVKAIALRDNFQYLTVKSNKEVMILQCAIKNYKWSLRASCSIHWDRSIWV 60
Query: 75 LTRFDSEHTCLVDVPLSDYRQATFTVTKDLIKNKISLAGFELSTSKDIVHFIRAEHGLSI 134
+TRFD EHTC VDVPL+D+RQATFTV KDLIKNKISLAG ELSTSKDIVHFIRA+HGLS
Sbjct: 61 VTRFDLEHTCSVDVPLTDHRQATFTVIKDLIKNKISLAGSELSTSKDIVHFIRAKHGLSK 120
Query: 135 SYQKAWRAHETALDDIRGSPDDSYKMLPRFAYILELNNPGIFAIYIGYVVEYKVDVDGRF 194
SYQKAWRA E LDDIRGS +DSYKML RF YILELNN +G V+EYKVD DGRF
Sbjct: 121 SYQKAWRAPEATLDDIRGSHEDSYKMLSRFVYILELNN-------LGSVIEYKVDADGRF 180
Query: 195 LYFFMALSASISGWQHCRPIISIDGTSLKNKYG-GTLLSASTLD 238
LYFFMAL ASI+GW+H R +ISIDGTSLKN+YG GTLL AST D
Sbjct: 181 LYFFMALFASITGWKHYRLVISIDGTSLKNQYGDGTLLFASTPD 217
BLAST of Cmc08g0230081 vs. TAIR 10
Match:
AT1G64260.1 (MuDR family transposase )
HSP 1 Score: 72.8 bits (177), Expect = 4.2e-13
Identity = 56/239 (23.43%), Postives = 105/239 (43.93%), Query Frame = 0
Query: 4 VDSNFVLKVQDMFSTKSLFKQYVQAIAIRDNFQYVIVKSNKEVMILQCAIENCKWSLRAS 63
+D + + + F + K+ V IR ++ ++ KE+ +C CKWSLRA+
Sbjct: 179 IDDDHDMHLGLCFKDRDELKKAVDWWCIRRRRNCIVRETEKEMYTFECVRWKCKWSLRAA 238
Query: 64 CCIHGDRSLWVLTRFDSEHTCLVDVPLSDYRQATFTVTKDLIKNKISLAGFELSTSKDIV 123
+ L +T++ HTC + P + + +++ + +L+ EL
Sbjct: 239 RM--EEHGLVEITKYTGPHTCSHEYPNDFESEFAADEIERVVRIQPTLSIAELK------ 298
Query: 124 HFIRAEHGLSISYQKAWRAHETALDDIRGSPDDSYKMLPRFAYILELNNPGIFAIYIGYV 183
+ + + G + K + + G D S++++P+ +N G +
Sbjct: 299 KWWKEKTGYELQTSKMRDGKLEVIKRVFGDEDQSFRVMPKLISAFHSSN--------GLL 358
Query: 184 VEYKVDV-----DGRFLYFFMALSASISGWQHCRPIISIDGTSLKNKYGGTLLSASTLD 238
V+++ D+ F F + S SI G+QHCRP+I +D SL KY L+ AS +D
Sbjct: 359 VDWQYDLFPNPDFASFRGVFWSFSQSIEGFQHCRPLIVVDTKSLNGKYQLKLMIASGVD 401
BLAST of Cmc08g0230081 vs. TAIR 10
Match:
AT1G64255.1 (MuDR family transposase )
HSP 1 Score: 63.5 bits (153), Expect = 2.6e-10
Identity = 61/234 (26.07%), Postives = 103/234 (44.02%), Query Frame = 0
Query: 10 LKVQDMFSTKSLFKQYVQAIAIRDNFQYVIVKSNKEVMILQCAIENCKWSLRAS-CCIHG 69
L+V F K+ V +++ + V+ ++ K+ I +C CKWSL A+ HG
Sbjct: 192 LRVGLCFKDGDELKKAVDWCSLKAQQKCVVRETAKDEYIFECIRWKCKWSLGAARMKKHG 251
Query: 70 DRSLWVLTRFDSEHTCLVDVPLSDYRQATFTVTKDLIKNKISLAGFELSTSKDIVHFIRA 129
L + ++ HTC VP D++ T D I+ + T ++ + +
Sbjct: 252 ---LVEIIKYTGPHTCHPIVP-EDFKSEFET---DEIERAVRY--MPTQTISELKKWWKK 311
Query: 130 EHGLSISYQKAWRAHETALDDIRGSPDDSYKMLPRFAYILELNNPGIFAIYIGYVVEYKV 189
+ G + A E A+ + G D S++ P+ L +N G +V++K
Sbjct: 312 KIGYELETSDVRLAKEKAIKRVFGDWDQSFEDFPKLMSALCSSN--------GLLVDWKY 371
Query: 190 DV-----DGRFLYFFMALSASISGWQHCRPIISIDGTSLKNKYGGTLLSASTLD 238
D+ F F A SI G+QHCRP+I +D +L +Y L+ AS +D
Sbjct: 372 DLFPNPNFASFCGVFWAFPQSIEGFQHCRPLIVVDTKNLNCEYQLKLMIASGVD 408
BLAST of Cmc08g0230081 vs. TAIR 10
Match:
AT1G49920.1 (MuDR family transposase )
HSP 1 Score: 62.8 bits (151), Expect = 4.4e-10
Identity = 57/243 (23.46%), Postives = 110/243 (45.27%), Query Frame = 0
Query: 10 LKVQDMFSTKSLFKQYVQAIAIRDNFQYVIVKSNKEVMILQCAIENCKWSLRASCCIHGD 69
++V F + K+ V +I+ + ++ ++ K+V +++C +CKWS+ AS +
Sbjct: 180 MRVGLCFKDLAEMKKAVDWCSIKRRQKCLLRETEKDVYVVECERWHCKWSICAS--RREE 239
Query: 70 RSLWVLTRFDSEHTCLVDVPLSDYRQATFTV-TKDLIKNKISLAGFELSTSKDIVHFIRA 129
L+ +T H C + L+D+ + +++ + +L+ EL +
Sbjct: 240 DGLFEITECSGPHDCYPE-HLNDFDAECIPFQIERVVRVQPTLSTAELD------KWWEK 299
Query: 130 EHGLSISYQKAWRAHETALDDIR--------GSPDDSYKMLPRFAYILELNNPGIFAIYI 189
+ G ++ Q E ++D + G D S++++P+ +L +N
Sbjct: 300 KFGFALD-QVVEHCSEGLVEDAKVKAIKRFFGDWDQSFRLIPKLMSVLHSSN-------- 359
Query: 190 GYVVEYKVD------VDGRFLYFFMALSASISGWQHCRPIISIDGTSLKNKYGGTLLSAS 238
G +V+++ D F F A S SI G+QHCRP+I +D +L KY L+ AS
Sbjct: 360 GLLVDWQYDSLTHDPEHASFRGLFWAFSQSIQGFQHCRPLIVVDTKNLGGKYKMKLMIAS 404
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAA0060121.1 | 3.8e-133 | 100.00 | protein FAR-RED ELONGATED HYPOCOTYL 3-like [Cucumis melo var. makuwa] | [more] |
KAA0039149.1 | 2.4e-103 | 82.70 | protein FAR-RED ELONGATED HYPOCOTYL 3-like [Cucumis melo var. makuwa] | [more] |
XP_008463110.1 | 2.4e-103 | 82.70 | PREDICTED: uncharacterized protein LOC103501336 [Cucumis melo] | [more] |
KAA0033232.1 | 1.7e-93 | 79.11 | protein FAR-RED ELONGATED HYPOCOTYL 3-like [Cucumis melo var. makuwa] >TYJ98812.... | [more] |
KAA0051302.1 | 8.1e-91 | 78.57 | protein FAR-RED ELONGATED HYPOCOTYL 3-like [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7V2Y2 | 1.9e-133 | 100.00 | Protein FAR-RED ELONGATED HYPOCOTYL 3-like OS=Cucumis melo var. makuwa OX=119469... | [more] |
A0A5A7TCZ3 | 1.2e-103 | 82.70 | Protein FAR-RED ELONGATED HYPOCOTYL 3-like OS=Cucumis melo var. makuwa OX=119469... | [more] |
A0A1S3CIV7 | 1.2e-103 | 82.70 | uncharacterized protein LOC103501336 OS=Cucumis melo OX=3656 GN=LOC103501336 PE=... | [more] |
A0A5D3BGB6 | 8.5e-94 | 79.11 | Protein FAR-RED ELONGATED HYPOCOTYL 3-like OS=Cucumis melo var. makuwa OX=119469... | [more] |
A0A5A7U620 | 3.9e-91 | 78.57 | Protein FAR-RED ELONGATED HYPOCOTYL 3-like OS=Cucumis melo var. makuwa OX=119469... | [more] |