Cmc08g0230081 (gene) Melon (Charmono) v1.1

Overview
NameCmc08g0230081
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionProtein FAR-RED ELONGATED HYPOCOTYL 3-like
LocationCMiso1.1chr08: 25484303 .. 25485102 (+)
RNA-Seq ExpressionCmc08g0230081
SyntenyCmc08g0230081
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTAAGGTAGATTCCAATTTTGTGCTGAAAGTCCAGGACATGTTTTCAACAAAATCTTTGTTCAAACAGTACGTACAAGCTATTGCTATTAGAGATAATTTCCAGTACGTTATCGTGAAATCGAACAAGGAAGTTATGATTTTGCAATGCGCCATTGAAAATTGCAAATGGTCCTTACGTGCTTCTTGTTGTATTCATGGGGATAGGTCATTATGGGTTCTTACTAGGTTTGATTCAGAACATACATGTTTAGTAGATGTTCCATTATCCGATTATAGACAGGCCACCTTTACTGTTACCAAGGACCTAATTAAGAACAAAATTTCTTTAGCTGGTTTTGAATTGTCAACTTCCAAAGATATAGTTCATTTCATTCGTGCTGAACATGGTTTAAGTATATCCTACCAAAAAGCATGGCGTGCTCATGAGACTGCGTTGGATGATATTCGTGGATCTCCAGATGACTCCTACAAGATGTTACCCAGATTTGCATATATATTGGAACTCAACAACCCAGGTATATTCGCAATATACATAGGTATATTACTATACAATTTTCCTTCATTATTTCTTTAACATGTTTTTGTCATATGTTCTTATTTTTTTTTATGTTTATAGGTTATGTTGTTGAATACAAAGTTGATGTCGATGGTAGATTTCTTTACTTCTTCATGGCATTATCTGCTTCCATTTCTGGTTGGCAACATTGTCGTCCAATCATTTCTATTGATGGAACAAGTCTGAAGAATAAGTACGGTGGTACTTTGTTATCTGCTTCAACTCTTGATGGCCAATGA

mRNA sequence

ATGTCTAAGGTAGATTCCAATTTTGTGCTGAAAGTCCAGGACATGTTTTCAACAAAATCTTTGTTCAAACAGTACGTACAAGCTATTGCTATTAGAGATAATTTCCAGTACGTTATCGTGAAATCGAACAAGGAAGTTATGATTTTGCAATGCGCCATTGAAAATTGCAAATGGTCCTTACGTGCTTCTTGTTGTATTCATGGGGATAGGTCATTATGGGTTCTTACTAGGTTTGATTCAGAACATACATGTTTAGTAGATGTTCCATTATCCGATTATAGACAGGCCACCTTTACTGTTACCAAGGACCTAATTAAGAACAAAATTTCTTTAGCTGGTTTTGAATTGTCAACTTCCAAAGATATAGTTCATTTCATTCGTGCTGAACATGGTTTAAGTATATCCTACCAAAAAGCATGGCGTGCTCATGAGACTGCGTTGGATGATATTCGTGGATCTCCAGATGACTCCTACAAGATGTTACCCAGATTTGCATATATATTGGAACTCAACAACCCAGGTATATTCGCAATATACATAGGTTATGTTGTTGAATACAAAGTTGATGTCGATGGTAGATTTCTTTACTTCTTCATGGCATTATCTGCTTCCATTTCTGGTTGGCAACATTGTCGTCCAATCATTTCTATTGATGGAACAAGTCTGAAGAATAAGTACGGTGGTACTTTGTTATCTGCTTCAACTCTTGATGGCCAATGA

Coding sequence (CDS)

ATGTCTAAGGTAGATTCCAATTTTGTGCTGAAAGTCCAGGACATGTTTTCAACAAAATCTTTGTTCAAACAGTACGTACAAGCTATTGCTATTAGAGATAATTTCCAGTACGTTATCGTGAAATCGAACAAGGAAGTTATGATTTTGCAATGCGCCATTGAAAATTGCAAATGGTCCTTACGTGCTTCTTGTTGTATTCATGGGGATAGGTCATTATGGGTTCTTACTAGGTTTGATTCAGAACATACATGTTTAGTAGATGTTCCATTATCCGATTATAGACAGGCCACCTTTACTGTTACCAAGGACCTAATTAAGAACAAAATTTCTTTAGCTGGTTTTGAATTGTCAACTTCCAAAGATATAGTTCATTTCATTCGTGCTGAACATGGTTTAAGTATATCCTACCAAAAAGCATGGCGTGCTCATGAGACTGCGTTGGATGATATTCGTGGATCTCCAGATGACTCCTACAAGATGTTACCCAGATTTGCATATATATTGGAACTCAACAACCCAGGTATATTCGCAATATACATAGGTTATGTTGTTGAATACAAAGTTGATGTCGATGGTAGATTTCTTTACTTCTTCATGGCATTATCTGCTTCCATTTCTGGTTGGCAACATTGTCGTCCAATCATTTCTATTGATGGAACAAGTCTGAAGAATAAGTACGGTGGTACTTTGTTATCTGCTTCAACTCTTGATGGCCAATGA

Protein sequence

MSKVDSNFVLKVQDMFSTKSLFKQYVQAIAIRDNFQYVIVKSNKEVMILQCAIENCKWSLRASCCIHGDRSLWVLTRFDSEHTCLVDVPLSDYRQATFTVTKDLIKNKISLAGFELSTSKDIVHFIRAEHGLSISYQKAWRAHETALDDIRGSPDDSYKMLPRFAYILELNNPGIFAIYIGYVVEYKVDVDGRFLYFFMALSASISGWQHCRPIISIDGTSLKNKYGGTLLSASTLDGQ
Homology
BLAST of Cmc08g0230081 vs. NCBI nr
Match: KAA0060121.1 (protein FAR-RED ELONGATED HYPOCOTYL 3-like [Cucumis melo var. makuwa])

HSP 1 Score: 485.0 bits (1247), Expect = 3.8e-133
Identity = 239/239 (100.00%), Postives = 239/239 (100.00%), Query Frame = 0

Query: 1   MSKVDSNFVLKVQDMFSTKSLFKQYVQAIAIRDNFQYVIVKSNKEVMILQCAIENCKWSL 60
           MSKVDSNFVLKVQDMFSTKSLFKQYVQAIAIRDNFQYVIVKSNKEVMILQCAIENCKWSL
Sbjct: 1   MSKVDSNFVLKVQDMFSTKSLFKQYVQAIAIRDNFQYVIVKSNKEVMILQCAIENCKWSL 60

Query: 61  RASCCIHGDRSLWVLTRFDSEHTCLVDVPLSDYRQATFTVTKDLIKNKISLAGFELSTSK 120
           RASCCIHGDRSLWVLTRFDSEHTCLVDVPLSDYRQATFTVTKDLIKNKISLAGFELSTSK
Sbjct: 61  RASCCIHGDRSLWVLTRFDSEHTCLVDVPLSDYRQATFTVTKDLIKNKISLAGFELSTSK 120

Query: 121 DIVHFIRAEHGLSISYQKAWRAHETALDDIRGSPDDSYKMLPRFAYILELNNPGIFAIYI 180
           DIVHFIRAEHGLSISYQKAWRAHETALDDIRGSPDDSYKMLPRFAYILELNNPGIFAIYI
Sbjct: 121 DIVHFIRAEHGLSISYQKAWRAHETALDDIRGSPDDSYKMLPRFAYILELNNPGIFAIYI 180

Query: 181 GYVVEYKVDVDGRFLYFFMALSASISGWQHCRPIISIDGTSLKNKYGGTLLSASTLDGQ 240
           GYVVEYKVDVDGRFLYFFMALSASISGWQHCRPIISIDGTSLKNKYGGTLLSASTLDGQ
Sbjct: 181 GYVVEYKVDVDGRFLYFFMALSASISGWQHCRPIISIDGTSLKNKYGGTLLSASTLDGQ 239

BLAST of Cmc08g0230081 vs. NCBI nr
Match: KAA0039149.1 (protein FAR-RED ELONGATED HYPOCOTYL 3-like [Cucumis melo var. makuwa])

HSP 1 Score: 386.0 bits (990), Expect = 2.4e-103
Identity = 196/237 (82.70%), Postives = 208/237 (87.76%), Query Frame = 0

Query: 1   MSKVDSNFVLKVQDMFSTKSLFKQYVQAIAIRDNFQYVIVKSNKEVMILQCAIENCKWSL 60
           MSKVDSNF LKVQDMFS+K LFKQ +QAI +RDNFQYVIVKSNKEVMILQCAIENCKWSL
Sbjct: 1   MSKVDSNFALKVQDMFSSKYLFKQCIQAITLRDNFQYVIVKSNKEVMILQCAIENCKWSL 60

Query: 61  RASCCIHGDRSLWVLTRFDSEHTCLVDVPLSDYRQATFTVTKDLIKNKISLAGFELSTSK 120
           RASCCIHGDRSLWVLTRFD EHT  VDVPL+D+RQATF V KDLIKNKISLAG +LST K
Sbjct: 61  RASCCIHGDRSLWVLTRFDFEHTYSVDVPLTDHRQATFNVIKDLIKNKISLAGSKLSTPK 120

Query: 121 DIVHFIRAEHGLSISYQKAWRAHETALDDIRGSPDDSYKMLPRFAYILELNNPGIFAIYI 180
           +IVHFI  EHGLSISYQKAWRA + ALDDIRGS +DSYKMLPRFAYILELNN       +
Sbjct: 121 NIVHFICDEHGLSISYQKAWRACKVALDDIRGSLEDSYKMLPRFAYILELNN-------L 180

Query: 181 GYVVEYKVDVDGRFLYFFMALSASISGWQHCRPIISIDGTSLKNKYGGTLLSASTLD 238
           G VVEYKVD D RFLYFFMALSASISGWQHC  +I IDGTSLKNKYGGTLLS+STLD
Sbjct: 181 GSVVEYKVDADDRFLYFFMALSASISGWQHCCLVIFIDGTSLKNKYGGTLLSSSTLD 230

BLAST of Cmc08g0230081 vs. NCBI nr
Match: XP_008463110.1 (PREDICTED: uncharacterized protein LOC103501336 [Cucumis melo])

HSP 1 Score: 386.0 bits (990), Expect = 2.4e-103
Identity = 196/237 (82.70%), Postives = 208/237 (87.76%), Query Frame = 0

Query: 1   MSKVDSNFVLKVQDMFSTKSLFKQYVQAIAIRDNFQYVIVKSNKEVMILQCAIENCKWSL 60
           MSKVDSNF LKVQDMFS+K LFKQ +QAI +RDNFQYVIVKSNKEVMILQCAIENCKWSL
Sbjct: 1   MSKVDSNFALKVQDMFSSKYLFKQCIQAITLRDNFQYVIVKSNKEVMILQCAIENCKWSL 60

Query: 61  RASCCIHGDRSLWVLTRFDSEHTCLVDVPLSDYRQATFTVTKDLIKNKISLAGFELSTSK 120
           RASCCIHGDRSLWVLTRFD EHT  VDVPL+D+RQATF V KDLIKNKISLAG +LST K
Sbjct: 61  RASCCIHGDRSLWVLTRFDFEHTYSVDVPLTDHRQATFNVIKDLIKNKISLAGSKLSTPK 120

Query: 121 DIVHFIRAEHGLSISYQKAWRAHETALDDIRGSPDDSYKMLPRFAYILELNNPGIFAIYI 180
           +IVHFI  EHGLSISYQKAWRA + ALDDIRGS +DSYKMLPRFAYILELNN       +
Sbjct: 121 NIVHFICDEHGLSISYQKAWRACKVALDDIRGSLEDSYKMLPRFAYILELNN-------L 180

Query: 181 GYVVEYKVDVDGRFLYFFMALSASISGWQHCRPIISIDGTSLKNKYGGTLLSASTLD 238
           G VVEYKVD D RFLYFFMALSASISGWQHC  +I IDGTSLKNKYGGTLLS+STLD
Sbjct: 181 GSVVEYKVDADDRFLYFFMALSASISGWQHCCLVIFIDGTSLKNKYGGTLLSSSTLD 230

BLAST of Cmc08g0230081 vs. NCBI nr
Match: KAA0033232.1 (protein FAR-RED ELONGATED HYPOCOTYL 3-like [Cucumis melo var. makuwa] >TYJ98812.1 protein FAR-RED ELONGATED HYPOCOTYL 3-like [Cucumis melo var. makuwa])

HSP 1 Score: 353.2 bits (905), Expect = 1.7e-93
Identity = 178/225 (79.11%), Postives = 192/225 (85.33%), Query Frame = 0

Query: 1   MSKVDSNFVLKVQDMFSTKSLFKQYVQAIAIRDNFQYVIVKSNKEVMILQCAIENCKWSL 60
           MSKVDSNF LKVQDMFSTKS FKQ VQAIA+RDNFQYV VKSNKEVMILQC IENCK SL
Sbjct: 1   MSKVDSNFALKVQDMFSTKSWFKQSVQAIALRDNFQYVAVKSNKEVMILQCTIENCKCSL 60

Query: 61  RASCCIHGDRSLWVLTRFDSEHTCLVDVPLSDYRQATFTVTKDLIKNKISLAGFELSTSK 120
            AS CIHGDR+LWVLTR+DSEHTC VDVPL+D+R ATFTV KDLIKNKI LAG ELST K
Sbjct: 61  CASFCIHGDRTLWVLTRYDSEHTCSVDVPLTDHRHATFTVIKDLIKNKIFLAGSELSTPK 120

Query: 121 DIVHFIRAEHGLSISYQKAWRAHETALDDIRGSPDDSYKMLPRFAYILELNNPGIFAIYI 180
           DIV +IRAEHGLSI YQ AWRA E ALD+I GSP+DSYKM+P+F YIL+LN P       
Sbjct: 121 DIVRYIRAEHGLSIFYQIAWRAREAALDEIHGSPEDSYKMIPQFVYILKLNKP------- 180

Query: 181 GYVVEYKVDVDGRFLYFFMALSASISGWQHCRPIISIDGTSLKNK 226
             VVEYKVD DGRFLYFF+ALSA+ISGWQHC P+ISIDGTSLKNK
Sbjct: 181 CSVVEYKVDADGRFLYFFVALSATISGWQHCCPLISIDGTSLKNK 218

BLAST of Cmc08g0230081 vs. NCBI nr
Match: KAA0051302.1 (protein FAR-RED ELONGATED HYPOCOTYL 3-like [Cucumis melo var. makuwa])

HSP 1 Score: 344.4 bits (882), Expect = 8.1e-91
Identity = 176/224 (78.57%), Postives = 193/224 (86.16%), Query Frame = 0

Query: 15  MFSTKSLFKQYVQAIAIRDNFQYVIVKSNKEVMILQCAIENCKWSLRASCCIHGDRSLWV 74
           MFSTKSLFK+ V+AIA+RDNFQY+ VKSNKEVMILQCAI+N KWSLRASC IH DRS+WV
Sbjct: 1   MFSTKSLFKKCVKAIALRDNFQYLTVKSNKEVMILQCAIKNYKWSLRASCSIHWDRSIWV 60

Query: 75  LTRFDSEHTCLVDVPLSDYRQATFTVTKDLIKNKISLAGFELSTSKDIVHFIRAEHGLSI 134
           +TRFD EHTC VDVPL+D+RQATFTV KDLIKNKISLAG ELSTSKDIVHFIRA+HGLS 
Sbjct: 61  VTRFDLEHTCSVDVPLTDHRQATFTVIKDLIKNKISLAGSELSTSKDIVHFIRAKHGLSK 120

Query: 135 SYQKAWRAHETALDDIRGSPDDSYKMLPRFAYILELNNPGIFAIYIGYVVEYKVDVDGRF 194
           SYQKAWRA E  LDDIRGS +DSYKML RF YILELNN       +G V+EYKVD DGRF
Sbjct: 121 SYQKAWRAPEATLDDIRGSHEDSYKMLSRFVYILELNN-------LGSVIEYKVDADGRF 180

Query: 195 LYFFMALSASISGWQHCRPIISIDGTSLKNKYG-GTLLSASTLD 238
           LYFFMAL ASI+GW+H R +ISIDGTSLKN+YG GTLL AST D
Sbjct: 181 LYFFMALFASITGWKHYRLVISIDGTSLKNQYGDGTLLFASTPD 217

BLAST of Cmc08g0230081 vs. ExPASy TrEMBL
Match: A0A5A7V2Y2 (Protein FAR-RED ELONGATED HYPOCOTYL 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold39G00410 PE=4 SV=1)

HSP 1 Score: 485.0 bits (1247), Expect = 1.9e-133
Identity = 239/239 (100.00%), Postives = 239/239 (100.00%), Query Frame = 0

Query: 1   MSKVDSNFVLKVQDMFSTKSLFKQYVQAIAIRDNFQYVIVKSNKEVMILQCAIENCKWSL 60
           MSKVDSNFVLKVQDMFSTKSLFKQYVQAIAIRDNFQYVIVKSNKEVMILQCAIENCKWSL
Sbjct: 1   MSKVDSNFVLKVQDMFSTKSLFKQYVQAIAIRDNFQYVIVKSNKEVMILQCAIENCKWSL 60

Query: 61  RASCCIHGDRSLWVLTRFDSEHTCLVDVPLSDYRQATFTVTKDLIKNKISLAGFELSTSK 120
           RASCCIHGDRSLWVLTRFDSEHTCLVDVPLSDYRQATFTVTKDLIKNKISLAGFELSTSK
Sbjct: 61  RASCCIHGDRSLWVLTRFDSEHTCLVDVPLSDYRQATFTVTKDLIKNKISLAGFELSTSK 120

Query: 121 DIVHFIRAEHGLSISYQKAWRAHETALDDIRGSPDDSYKMLPRFAYILELNNPGIFAIYI 180
           DIVHFIRAEHGLSISYQKAWRAHETALDDIRGSPDDSYKMLPRFAYILELNNPGIFAIYI
Sbjct: 121 DIVHFIRAEHGLSISYQKAWRAHETALDDIRGSPDDSYKMLPRFAYILELNNPGIFAIYI 180

Query: 181 GYVVEYKVDVDGRFLYFFMALSASISGWQHCRPIISIDGTSLKNKYGGTLLSASTLDGQ 240
           GYVVEYKVDVDGRFLYFFMALSASISGWQHCRPIISIDGTSLKNKYGGTLLSASTLDGQ
Sbjct: 181 GYVVEYKVDVDGRFLYFFMALSASISGWQHCRPIISIDGTSLKNKYGGTLLSASTLDGQ 239

BLAST of Cmc08g0230081 vs. ExPASy TrEMBL
Match: A0A5A7TCZ3 (Protein FAR-RED ELONGATED HYPOCOTYL 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold121G00480 PE=4 SV=1)

HSP 1 Score: 386.0 bits (990), Expect = 1.2e-103
Identity = 196/237 (82.70%), Postives = 208/237 (87.76%), Query Frame = 0

Query: 1   MSKVDSNFVLKVQDMFSTKSLFKQYVQAIAIRDNFQYVIVKSNKEVMILQCAIENCKWSL 60
           MSKVDSNF LKVQDMFS+K LFKQ +QAI +RDNFQYVIVKSNKEVMILQCAIENCKWSL
Sbjct: 1   MSKVDSNFALKVQDMFSSKYLFKQCIQAITLRDNFQYVIVKSNKEVMILQCAIENCKWSL 60

Query: 61  RASCCIHGDRSLWVLTRFDSEHTCLVDVPLSDYRQATFTVTKDLIKNKISLAGFELSTSK 120
           RASCCIHGDRSLWVLTRFD EHT  VDVPL+D+RQATF V KDLIKNKISLAG +LST K
Sbjct: 61  RASCCIHGDRSLWVLTRFDFEHTYSVDVPLTDHRQATFNVIKDLIKNKISLAGSKLSTPK 120

Query: 121 DIVHFIRAEHGLSISYQKAWRAHETALDDIRGSPDDSYKMLPRFAYILELNNPGIFAIYI 180
           +IVHFI  EHGLSISYQKAWRA + ALDDIRGS +DSYKMLPRFAYILELNN       +
Sbjct: 121 NIVHFICDEHGLSISYQKAWRACKVALDDIRGSLEDSYKMLPRFAYILELNN-------L 180

Query: 181 GYVVEYKVDVDGRFLYFFMALSASISGWQHCRPIISIDGTSLKNKYGGTLLSASTLD 238
           G VVEYKVD D RFLYFFMALSASISGWQHC  +I IDGTSLKNKYGGTLLS+STLD
Sbjct: 181 GSVVEYKVDADDRFLYFFMALSASISGWQHCCLVIFIDGTSLKNKYGGTLLSSSTLD 230

BLAST of Cmc08g0230081 vs. ExPASy TrEMBL
Match: A0A1S3CIV7 (uncharacterized protein LOC103501336 OS=Cucumis melo OX=3656 GN=LOC103501336 PE=4 SV=1)

HSP 1 Score: 386.0 bits (990), Expect = 1.2e-103
Identity = 196/237 (82.70%), Postives = 208/237 (87.76%), Query Frame = 0

Query: 1   MSKVDSNFVLKVQDMFSTKSLFKQYVQAIAIRDNFQYVIVKSNKEVMILQCAIENCKWSL 60
           MSKVDSNF LKVQDMFS+K LFKQ +QAI +RDNFQYVIVKSNKEVMILQCAIENCKWSL
Sbjct: 1   MSKVDSNFALKVQDMFSSKYLFKQCIQAITLRDNFQYVIVKSNKEVMILQCAIENCKWSL 60

Query: 61  RASCCIHGDRSLWVLTRFDSEHTCLVDVPLSDYRQATFTVTKDLIKNKISLAGFELSTSK 120
           RASCCIHGDRSLWVLTRFD EHT  VDVPL+D+RQATF V KDLIKNKISLAG +LST K
Sbjct: 61  RASCCIHGDRSLWVLTRFDFEHTYSVDVPLTDHRQATFNVIKDLIKNKISLAGSKLSTPK 120

Query: 121 DIVHFIRAEHGLSISYQKAWRAHETALDDIRGSPDDSYKMLPRFAYILELNNPGIFAIYI 180
           +IVHFI  EHGLSISYQKAWRA + ALDDIRGS +DSYKMLPRFAYILELNN       +
Sbjct: 121 NIVHFICDEHGLSISYQKAWRACKVALDDIRGSLEDSYKMLPRFAYILELNN-------L 180

Query: 181 GYVVEYKVDVDGRFLYFFMALSASISGWQHCRPIISIDGTSLKNKYGGTLLSASTLD 238
           G VVEYKVD D RFLYFFMALSASISGWQHC  +I IDGTSLKNKYGGTLLS+STLD
Sbjct: 181 GSVVEYKVDADDRFLYFFMALSASISGWQHCCLVIFIDGTSLKNKYGGTLLSSSTLD 230

BLAST of Cmc08g0230081 vs. ExPASy TrEMBL
Match: A0A5D3BGB6 (Protein FAR-RED ELONGATED HYPOCOTYL 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold703G00120 PE=4 SV=1)

HSP 1 Score: 353.2 bits (905), Expect = 8.5e-94
Identity = 178/225 (79.11%), Postives = 192/225 (85.33%), Query Frame = 0

Query: 1   MSKVDSNFVLKVQDMFSTKSLFKQYVQAIAIRDNFQYVIVKSNKEVMILQCAIENCKWSL 60
           MSKVDSNF LKVQDMFSTKS FKQ VQAIA+RDNFQYV VKSNKEVMILQC IENCK SL
Sbjct: 1   MSKVDSNFALKVQDMFSTKSWFKQSVQAIALRDNFQYVAVKSNKEVMILQCTIENCKCSL 60

Query: 61  RASCCIHGDRSLWVLTRFDSEHTCLVDVPLSDYRQATFTVTKDLIKNKISLAGFELSTSK 120
            AS CIHGDR+LWVLTR+DSEHTC VDVPL+D+R ATFTV KDLIKNKI LAG ELST K
Sbjct: 61  CASFCIHGDRTLWVLTRYDSEHTCSVDVPLTDHRHATFTVIKDLIKNKIFLAGSELSTPK 120

Query: 121 DIVHFIRAEHGLSISYQKAWRAHETALDDIRGSPDDSYKMLPRFAYILELNNPGIFAIYI 180
           DIV +IRAEHGLSI YQ AWRA E ALD+I GSP+DSYKM+P+F YIL+LN P       
Sbjct: 121 DIVRYIRAEHGLSIFYQIAWRAREAALDEIHGSPEDSYKMIPQFVYILKLNKP------- 180

Query: 181 GYVVEYKVDVDGRFLYFFMALSASISGWQHCRPIISIDGTSLKNK 226
             VVEYKVD DGRFLYFF+ALSA+ISGWQHC P+ISIDGTSLKNK
Sbjct: 181 CSVVEYKVDADGRFLYFFVALSATISGWQHCCPLISIDGTSLKNK 218

BLAST of Cmc08g0230081 vs. ExPASy TrEMBL
Match: A0A5A7U620 (Protein FAR-RED ELONGATED HYPOCOTYL 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55G00090 PE=4 SV=1)

HSP 1 Score: 344.4 bits (882), Expect = 3.9e-91
Identity = 176/224 (78.57%), Postives = 193/224 (86.16%), Query Frame = 0

Query: 15  MFSTKSLFKQYVQAIAIRDNFQYVIVKSNKEVMILQCAIENCKWSLRASCCIHGDRSLWV 74
           MFSTKSLFK+ V+AIA+RDNFQY+ VKSNKEVMILQCAI+N KWSLRASC IH DRS+WV
Sbjct: 1   MFSTKSLFKKCVKAIALRDNFQYLTVKSNKEVMILQCAIKNYKWSLRASCSIHWDRSIWV 60

Query: 75  LTRFDSEHTCLVDVPLSDYRQATFTVTKDLIKNKISLAGFELSTSKDIVHFIRAEHGLSI 134
           +TRFD EHTC VDVPL+D+RQATFTV KDLIKNKISLAG ELSTSKDIVHFIRA+HGLS 
Sbjct: 61  VTRFDLEHTCSVDVPLTDHRQATFTVIKDLIKNKISLAGSELSTSKDIVHFIRAKHGLSK 120

Query: 135 SYQKAWRAHETALDDIRGSPDDSYKMLPRFAYILELNNPGIFAIYIGYVVEYKVDVDGRF 194
           SYQKAWRA E  LDDIRGS +DSYKML RF YILELNN       +G V+EYKVD DGRF
Sbjct: 121 SYQKAWRAPEATLDDIRGSHEDSYKMLSRFVYILELNN-------LGSVIEYKVDADGRF 180

Query: 195 LYFFMALSASISGWQHCRPIISIDGTSLKNKYG-GTLLSASTLD 238
           LYFFMAL ASI+GW+H R +ISIDGTSLKN+YG GTLL AST D
Sbjct: 181 LYFFMALFASITGWKHYRLVISIDGTSLKNQYGDGTLLFASTPD 217

BLAST of Cmc08g0230081 vs. TAIR 10
Match: AT1G64260.1 (MuDR family transposase )

HSP 1 Score: 72.8 bits (177), Expect = 4.2e-13
Identity = 56/239 (23.43%), Postives = 105/239 (43.93%), Query Frame = 0

Query: 4   VDSNFVLKVQDMFSTKSLFKQYVQAIAIRDNFQYVIVKSNKEVMILQCAIENCKWSLRAS 63
           +D +  + +   F  +   K+ V    IR     ++ ++ KE+   +C    CKWSLRA+
Sbjct: 179 IDDDHDMHLGLCFKDRDELKKAVDWWCIRRRRNCIVRETEKEMYTFECVRWKCKWSLRAA 238

Query: 64  CCIHGDRSLWVLTRFDSEHTCLVDVPLSDYRQATFTVTKDLIKNKISLAGFELSTSKDIV 123
                +  L  +T++   HTC  + P     +      + +++ + +L+  EL       
Sbjct: 239 RM--EEHGLVEITKYTGPHTCSHEYPNDFESEFAADEIERVVRIQPTLSIAELK------ 298

Query: 124 HFIRAEHGLSISYQKAWRAHETALDDIRGSPDDSYKMLPRFAYILELNNPGIFAIYIGYV 183
            + + + G  +   K        +  + G  D S++++P+       +N        G +
Sbjct: 299 KWWKEKTGYELQTSKMRDGKLEVIKRVFGDEDQSFRVMPKLISAFHSSN--------GLL 358

Query: 184 VEYKVDV-----DGRFLYFFMALSASISGWQHCRPIISIDGTSLKNKYGGTLLSASTLD 238
           V+++ D+        F   F + S SI G+QHCRP+I +D  SL  KY   L+ AS +D
Sbjct: 359 VDWQYDLFPNPDFASFRGVFWSFSQSIEGFQHCRPLIVVDTKSLNGKYQLKLMIASGVD 401

BLAST of Cmc08g0230081 vs. TAIR 10
Match: AT1G64255.1 (MuDR family transposase )

HSP 1 Score: 63.5 bits (153), Expect = 2.6e-10
Identity = 61/234 (26.07%), Postives = 103/234 (44.02%), Query Frame = 0

Query: 10  LKVQDMFSTKSLFKQYVQAIAIRDNFQYVIVKSNKEVMILQCAIENCKWSLRAS-CCIHG 69
           L+V   F      K+ V   +++   + V+ ++ K+  I +C    CKWSL A+    HG
Sbjct: 192 LRVGLCFKDGDELKKAVDWCSLKAQQKCVVRETAKDEYIFECIRWKCKWSLGAARMKKHG 251

Query: 70  DRSLWVLTRFDSEHTCLVDVPLSDYRQATFTVTKDLIKNKISLAGFELSTSKDIVHFIRA 129
              L  + ++   HTC   VP  D++    T   D I+  +        T  ++  + + 
Sbjct: 252 ---LVEIIKYTGPHTCHPIVP-EDFKSEFET---DEIERAVRY--MPTQTISELKKWWKK 311

Query: 130 EHGLSISYQKAWRAHETALDDIRGSPDDSYKMLPRFAYILELNNPGIFAIYIGYVVEYKV 189
           + G  +       A E A+  + G  D S++  P+    L  +N        G +V++K 
Sbjct: 312 KIGYELETSDVRLAKEKAIKRVFGDWDQSFEDFPKLMSALCSSN--------GLLVDWKY 371

Query: 190 DV-----DGRFLYFFMALSASISGWQHCRPIISIDGTSLKNKYGGTLLSASTLD 238
           D+        F   F A   SI G+QHCRP+I +D  +L  +Y   L+ AS +D
Sbjct: 372 DLFPNPNFASFCGVFWAFPQSIEGFQHCRPLIVVDTKNLNCEYQLKLMIASGVD 408

BLAST of Cmc08g0230081 vs. TAIR 10
Match: AT1G49920.1 (MuDR family transposase )

HSP 1 Score: 62.8 bits (151), Expect = 4.4e-10
Identity = 57/243 (23.46%), Postives = 110/243 (45.27%), Query Frame = 0

Query: 10  LKVQDMFSTKSLFKQYVQAIAIRDNFQYVIVKSNKEVMILQCAIENCKWSLRASCCIHGD 69
           ++V   F   +  K+ V   +I+   + ++ ++ K+V +++C   +CKWS+ AS     +
Sbjct: 180 MRVGLCFKDLAEMKKAVDWCSIKRRQKCLLRETEKDVYVVECERWHCKWSICAS--RREE 239

Query: 70  RSLWVLTRFDSEHTCLVDVPLSDYRQATFTV-TKDLIKNKISLAGFELSTSKDIVHFIRA 129
             L+ +T     H C  +  L+D+         + +++ + +L+  EL        +   
Sbjct: 240 DGLFEITECSGPHDCYPE-HLNDFDAECIPFQIERVVRVQPTLSTAELD------KWWEK 299

Query: 130 EHGLSISYQKAWRAHETALDDIR--------GSPDDSYKMLPRFAYILELNNPGIFAIYI 189
           + G ++  Q      E  ++D +        G  D S++++P+   +L  +N        
Sbjct: 300 KFGFALD-QVVEHCSEGLVEDAKVKAIKRFFGDWDQSFRLIPKLMSVLHSSN-------- 359

Query: 190 GYVVEYKVD------VDGRFLYFFMALSASISGWQHCRPIISIDGTSLKNKYGGTLLSAS 238
           G +V+++ D          F   F A S SI G+QHCRP+I +D  +L  KY   L+ AS
Sbjct: 360 GLLVDWQYDSLTHDPEHASFRGLFWAFSQSIQGFQHCRPLIVVDTKNLGGKYKMKLMIAS 404

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0060121.13.8e-133100.00protein FAR-RED ELONGATED HYPOCOTYL 3-like [Cucumis melo var. makuwa][more]
KAA0039149.12.4e-10382.70protein FAR-RED ELONGATED HYPOCOTYL 3-like [Cucumis melo var. makuwa][more]
XP_008463110.12.4e-10382.70PREDICTED: uncharacterized protein LOC103501336 [Cucumis melo][more]
KAA0033232.11.7e-9379.11protein FAR-RED ELONGATED HYPOCOTYL 3-like [Cucumis melo var. makuwa] >TYJ98812.... [more]
KAA0051302.18.1e-9178.57protein FAR-RED ELONGATED HYPOCOTYL 3-like [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7V2Y21.9e-133100.00Protein FAR-RED ELONGATED HYPOCOTYL 3-like OS=Cucumis melo var. makuwa OX=119469... [more]
A0A5A7TCZ31.2e-10382.70Protein FAR-RED ELONGATED HYPOCOTYL 3-like OS=Cucumis melo var. makuwa OX=119469... [more]
A0A1S3CIV71.2e-10382.70uncharacterized protein LOC103501336 OS=Cucumis melo OX=3656 GN=LOC103501336 PE=... [more]
A0A5D3BGB68.5e-9479.11Protein FAR-RED ELONGATED HYPOCOTYL 3-like OS=Cucumis melo var. makuwa OX=119469... [more]
A0A5A7U6203.9e-9178.57Protein FAR-RED ELONGATED HYPOCOTYL 3-like OS=Cucumis melo var. makuwa OX=119469... [more]
Match NameE-valueIdentityDescription
AT1G64260.14.2e-1323.43MuDR family transposase [more]
AT1G64255.12.6e-1026.07MuDR family transposase [more]
AT1G49920.14.4e-1023.46MuDR family transposase [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004332Transposase, MuDR, plantPFAMPF03108DBD_Tnp_Mutcoord: 15..63
e-value: 2.3E-7
score: 30.7
NoneNo IPR availablePANTHERPTHR31973:SF129OS01G0334000 PROTEINcoord: 21..237
NoneNo IPR availablePANTHERPTHR31973POLYPROTEIN, PUTATIVE-RELATEDcoord: 21..237

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc08g0230081.1Cmc08g0230081.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005488 binding